RING-H2 zinc finger domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44578 AT2G44581 AT3G60966 |
| malus_domestica | MD01G1155300.v1.1 MD07G1086600.v1.1 |
| prunus_persica | Prupe.2G113400_v2.0.a1 Prupe.2G252900_v2.0.a1 |
| pyrus_communis | pycom01g17260 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 189 |
| AccB1I | GGYRCC | 1 cut(s) | 189 |
| AciI | CCGC | 1 cut(s) | 269 |
| AcoI | YGGCCR | 1 cut(s) | 181 |
| AfaI | GTAC | 2 cut(s) | 133, 191 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 169 |
| AflIII | ACRYGT | 1 cut(s) | 375 |
| AgsI | TTSAA | 1 cut(s) | 82 |
| AhlI | ACTAGT | 1 cut(s) | 134 |
| AluBI | AGCT | 1 cut(s) | 27 |
| AluI | AGCT | 1 cut(s) | 27 |
| AoxI | GGCC | 1 cut(s) | 181 |
| ApeKI | GCWGC | 2 cut(s) | 120, 316 |
| Asp718I | GGTACC | 1 cut(s) | 189 |
| AsuHPI | GGTGA | 1 cut(s) | 184 |
| BaeGI | GKGCMC | 1 cut(s) | 269 |
| BalI | TGGCCA | 1 cut(s) | 183 |
| BanI | GGYRCC | 1 cut(s) | 189 |
| BbvI | GCAGC | 2 cut(s) | 132, 328 |
| BccI | CCATC | 2 cut(s) | 4, 69 |
| BclI | TGATCA | 1 cut(s) | 283 |
| BcuI | ACTAGT | 1 cut(s) | 134 |
| BfaI | CTAG | 2 cut(s) | 135, 366 |
| BisI | GCNGC | 2 cut(s) | 121, 317 |
| BlsI | GCNGC | 2 cut(s) | 122, 318 |
| BmcAI | AGTACT | 1 cut(s) | 133 |
| BmiI | GGNNCC | 2 cut(s) | 191, 248 |
| Bsa29I | ATCGAT | 1 cut(s) | 237 |
| BsaAI | YACGTR | 1 cut(s) | 264 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 169 |
| Bse3DI | GCAATG | 1 cut(s) | 214 |
| BseCI | ATCGAT | 1 cut(s) | 237 |
| BseGI | GGATG | 1 cut(s) | 57 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BseMI | GCAATG | 1 cut(s) | 214 |
| BseSI | GKGCMC | 1 cut(s) | 269 |
| BseXI | GCAGC | 2 cut(s) | 132, 328 |
| BshFI | GGCC | 1 cut(s) | 183 |
| BshNI | GGYRCC | 1 cut(s) | 189 |
| BshVI | ATCGAT | 1 cut(s) | 237 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 169 |
| BsnI | GGCC | 1 cut(s) | 183 |
| Bsp1286I | GDGCHC | 1 cut(s) | 269 |
| Bsp143I | GATC | 2 cut(s) | 87, 283 |
| BspACI | CCGC | 1 cut(s) | 269 |
| BspANI | GGCC | 1 cut(s) | 183 |
| BspDI | ATCGAT | 1 cut(s) | 237 |
| BspLI | GGNNCC | 2 cut(s) | 191, 248 |
| BspT107I | GGYRCC | 1 cut(s) | 189 |
| BsrDI | GCAATG | 1 cut(s) | 214 |
| BssMI | GATC | 2 cut(s) | 87, 283 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 152 |
| Bst6I | CTCTTC | 1 cut(s) | 329 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 216 |
| BstBAI | YACGTR | 1 cut(s) | 264 |
| BstC8I | GCNNGC | 2 cut(s) | 25, 269 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 167 |
| BstF5I | GGATG | 1 cut(s) | 57 |
| BstKTI | GATC | 2 cut(s) | 90, 286 |
| BstMBI | GATC | 2 cut(s) | 87, 283 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 216, 273, 313 |
| BstSLI | GKGCMC | 1 cut(s) | 269 |
| BstV1I | GCAGC | 2 cut(s) | 132, 328 |
| Bsu15I | ATCGAT | 1 cut(s) | 237 |
| BsuRI | GGCC | 1 cut(s) | 183 |
| BsuTUI | ATCGAT | 1 cut(s) | 237 |
| BtsCI | GGATG | 1 cut(s) | 57 |
| Cac8I | GCNNGC | 2 cut(s) | 25, 269 |
| ClaI | ATCGAT | 1 cut(s) | 237 |
| Csp6I | GTAC | 2 cut(s) | 132, 190 |
| CviAII | CATG | 3 cut(s) | 179, 224, 243 |
| CviJI | RGCY | 3 cut(s) | 27, 183, 319 |
| CviKI_1 | RGCY | 3 cut(s) | 27, 183, 319 |
| CviQI | GTAC | 2 cut(s) | 132, 190 |
| DpnI | GATC | 2 cut(s) | 89, 285 |
| DpnII | GATC | 2 cut(s) | 87, 283 |
| EaeI | YGGCCR | 1 cut(s) | 181 |
| Eam1104I | CTCTTC | 1 cut(s) | 329 |
| EarI | CTCTTC | 1 cut(s) | 329 |
| Eco32I | GATATC | 1 cut(s) | 311 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 167 |
| EcoRV | GATATC | 1 cut(s) | 311 |
| FaeI | CATG | 3 cut(s) | 182, 227, 246 |
| FatI | CATG | 3 cut(s) | 178, 223, 242 |
| FauI | CCCGC | 1 cut(s) | 276 |
| FbaI | TGATCA | 1 cut(s) | 283 |
| Fnu4HI | GCNGC | 2 cut(s) | 121, 317 |
| FokI | GGATG | 1 cut(s) | 44 |
| Fsp4HI | GCNGC | 2 cut(s) | 121, 317 |
| FspBI | CTAG | 2 cut(s) | 135, 366 |
| GluI | GCNGC | 2 cut(s) | 121, 317 |
| HaeIII | GGCC | 1 cut(s) | 183 |
| Hin1II | CATG | 3 cut(s) | 182, 227, 246 |
| HindIII | AAGCTT | 1 cut(s) | 25 |
| HphI | GGTGA | 1 cut(s) | 184 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 152 |
| HpyCH4IV | ACGT | 2 cut(s) | 263, 377 |
| HpyCH4V | TGCA | 4 cut(s) | 120, 210, 276, 356 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 216, 273, 313 |
| HpySE526I | ACGT | 2 cut(s) | 263, 377 |
| Hsp92II | CATG | 3 cut(s) | 182, 227, 246 |
| KpnI | GGTACC | 1 cut(s) | 193 |
| Ksp22I | TGATCA | 1 cut(s) | 283 |
| Kzo9I | GATC | 2 cut(s) | 87, 283 |
| LpnPI | CCDG | 1 cut(s) | 272 |
| Lsp1109I | GCAGC | 2 cut(s) | 132, 328 |
| MaeI | CTAG | 2 cut(s) | 135, 366 |
| MaeII | ACGT | 2 cut(s) | 263, 377 |
| MalI | GATC | 2 cut(s) | 89, 285 |
| MboI | GATC | 2 cut(s) | 87, 283 |
| MboII | GAAGA | 1 cut(s) | 316 |
| MhlI | GDGCHC | 1 cut(s) | 269 |
| MlsI | TGGCCA | 1 cut(s) | 183 |
| MluCI | AATT | 1 cut(s) | 357 |
| MluNI | TGGCCA | 1 cut(s) | 183 |
| MnlI | CCTC | 3 cut(s) | 163, 173, 330 |
| Mox20I | TGGCCA | 1 cut(s) | 183 |
| MscI | TGGCCA | 1 cut(s) | 183 |
| Msp20I | TGGCCA | 1 cut(s) | 183 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 216, 273, 313 |
| NdeII | GATC | 2 cut(s) | 87, 283 |
| NlaIII | CATG | 3 cut(s) | 182, 227, 246 |
| NlaIV | GGNNCC | 2 cut(s) | 191, 248 |
| PkrI | GCNGC | 2 cut(s) | 122, 318 |
| Ppu21I | YACGTR | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 2 cut(s) | 191, 248 |
| RsaI | GTAC | 2 cut(s) | 133, 191 |
| RsaNI | GTAC | 2 cut(s) | 132, 190 |
| SatI | GCNGC | 2 cut(s) | 121, 317 |
| Sau3AI | GATC | 2 cut(s) | 87, 283 |
| ScaI | AGTACT | 1 cut(s) | 133 |
| SduI | GDGCHC | 1 cut(s) | 269 |
| SetI | ASST | 7 cut(s) | 29, 174, 191, 266, 291, 333, 380 |
| SpeI | ACTAGT | 1 cut(s) | 134 |
| Sse9I | AATT | 1 cut(s) | 357 |
| SsiI | CCGC | 1 cut(s) | 269 |
| SspMI | CTAG | 2 cut(s) | 135, 366 |
| TaaI | ACNGT | 2 cut(s) | 131, 152 |
| TaiI | ACGT | 2 cut(s) | 266, 380 |
| TaqI | TCGA | 1 cut(s) | 237 |
| TasI | AATT | 1 cut(s) | 357 |
| TatI | WGTACW | 1 cut(s) | 131 |
| TseI | GCWGC | 2 cut(s) | 120, 316 |
| TspDTI | ATGAA | 4 cut(s) | 19, 88, 290, 334 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 167 |
| XspI | CTAG | 2 cut(s) | 135, 366 |
| ZrmI | AGTACT | 1 cut(s) | 133 |