Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0009245

Physical Location & Seq

Genomic Coordinates Forward (+)

14944138 .. 14948163

Gene Structure 4026 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1119500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2244 bp

ATGACTTCGTCTACTTCCGTAACTCTGTCCCAGGCCCTCCTGGCCCGAGCCATTTCCCACCACGGCTCCAACTCCACCTCCGACCGTGTCTCCCTCTCCGCCACCCTCACGCTCCCCTCTTTCGCCGGCCTGAAATCTACATCTTTGTCGTCATCGCCGTCCTCTTCCCGCCCCTCACGCCGCCGGCTCGGTGCGAACCGGCCTGTCCGGGCCGCCGCGGTCGAGACTCTGGACAAGACCACAGAGACGTCGTTGGTGGAGAAGTCGGTGAACACGATCCGGTTCTTGGCGATTGACGCTGTGGAGAAGGCCAATTCGGGTCACCCTGGTTTGCCCATGGGATGTGCTCCGATGGGTCATATTCTCTACGACGAAATCATGAGGTACAACCCCAAGAACCCCTACTGGTTCAACCGTGACCGGTTCGTGTTGTCTGCTGGACACGGTTGTATGTTGCAGTATGCTCTGCTCCACCTTGCTGGATACGACAGTGTCAAGGAGGAAGATTTGAAGAGTTTCCGTCAATGGGGAAGCAAGACCCCTGGACACCCTGAGAACTTTGAGACACCCGGTGTTGAAGTCACAACCGGTCCTTTGGGGCAGGGTATTGCAAATGCTGTTGGTTTGGCCCTTGCTGAGAAGCACTTGGCTGCTCGTTACAACAAGCCTGACAGTGAGATCGTCGACCACTACACATATTGTATATTGGGTGATGGTTGTCAAATGGAGGGTATTTCAAATGAAGTTGCTTCTCTTGCGGGGCATTGGGGACTTGGGAAGCTGATAGCCTTCTATGATGACAACCACATTTCCATTGATGGAGATACTGAGATTGCATTCACCGAAAGTGTTGACACTCGTTTTGAGGGTCTTGGGTGGCACGTTATCTGGGTGAAGAATGGAAACACTGGGTATGATGAGATTCGAGCTGCCATTAAAGAAGCAAAGGCTGTCACAGACAAACCCACATTGATTAAGGTGACAACAACCATTGGTTTTGGATCCCCAAACAAAGCAAATTCATACAGTGTTCATGGTGCTGCACTTGGTTCCAAGGAAGTTGATGCTACCAGGAAGAACCTGGGATGGCCATATGAGCCTTTCCATGTGCCAGACGATGTTAAAAGTCACTGGAGCCGCCATACCACTGAAGGTGCTGCACTTGAAGCTGAATGGAATGCCAAGTTTGCAGAATATGAGAAGAAGTACGTGGAGGAAGCTGCAGAGCTGAACTCCATCATTAAGGGTGAGCTCCCTGCTGGTTGGGAAAAAGCACTACCGACTTACACCCCGGAGACCCCAGCTGATGCTACCCGAAATTTATCTCAAGCAAACCTTAATGCCCTTTCGAAGGTTCTCCCTGGCCTTATTGGAGGAAGTGCAGATCTTGCTTCCTCTAACATGACTTTACTGAAAAGTTTTGGAGACTTCCAGAAGAATACCCCAGAAGAGCGCAATGTAAGGTTTGGTGTAAGAGAGCATGGGATGGGAGCCATCTGCAACGGGATTGCCCTTCACAGCCCTGGCCTGATTCCATATTGTGCCACTTTCTTTGTTTTCACTGACTATATGAGAGCTGCCATAAGGATCTCTGCCTTGTCAGAGGCTGGAGTTATCTATGTTATGACCCACGATTCAATTGGGCTTGGAGAAGATGGACCAACCCATCAACCGATTGAGCACTTGGCAAGTTTCCGGGCAATGCCCAACATTTTGATGCTCCGCCCAGCTGATGGGAATGAGACTGCTGGGGCCTACAGAGTTGCAGTCCTCAACAGGAAGAGACCATCTATCCTTGCCCTTTCTCGACAAAAGTTGCCCAATCTTCCTGGAACTTCCATTGAGGGAGTCGAGAAGGGAGGCTACACAATATCAGACAACTCTTCTGGTAACAAGCCAGATGTTATTTTGATGGCAACGGGATCCGAGTTGGAAATTGTTGCCAAAGCTGGCGATGAGCTCAGAAAGGAAGGGAAGACTGTTAGAGTTGTCTCCTTTGTTTCTTGGGAACTCTTTGATGACCAATCAGATGCCTACAAGGAAAGTGTCTTGCCGGCTGCGGTAACAGCCAGGGTTAGCCTTGAGGCTGGATCAACATTTGGGTGGCACAAGATTGTTGGAAGCAAAGGAAAGGCAATTGGAATAGATAAATTTGGGGCAAGTGCACCAGCTGGAAAAATATACAAGGAGTACGGCATCACCGTTGAGGCAGTTGTTGTAGCAGCAAAAGAAGTTAGCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004802 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016740 GO:0016744 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00030 ko00710 ko01051 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00710 map01051 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C Transketolase_N

Protein Analysis

748

Amino Acids

80.49

Weight (kDa)

6.22

Isoelectric Point (pI)

33.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transketolase_N	PF00456	88 - 419	3e-152	Transketolase, thiamine diphosphate binding domain
Transket_pyr	PF02779	437 - 607	5.7e-53	Transketolase, pyrimidine binding domain
Transketolase_C_1	PF22613	620 - 734	1.9e-39	Transketolase-like TK C-terminal domain
Transketolase_C	PF02780	632 - 738	2.7e-08	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0009245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45290 AT2G45290 AT3G60750 AT3G60750
fragaria_vesca	FvH4_7g11510 FvH4_7g11510 FvH4_7g11510 FvH4_7g11510
malus_domestica	MD02G1207200.v1.1 MD07G1119500.v1.1
prunus_persica	Prupe.2G143600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0349951
rosa_laevigata	RLG00000028513
rosa_multiflora	Rmu_co8514097.1_g000001 Rmu_sc0000778.1_g000002 Rmu_sc0005220.1_g000014
rosa_roxburghii	Rroxscaffold_4G00305250
rosa_rugosa	Rorug01G0207300
rosa_samantha	Rh1BG191100 Rh1CG208600 Rh1DG219700
rosa_wichuraiana	Rw0G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	251
AccB7I	CCANNNNNTGG	1 cut(s)	1733
AccI	GTMKAC	2 cut(s)	11, 684
AccII	CGCG	1 cut(s)	218
AclWI	GGATC	7 cut(s)	271, 996, 1009, 1595, 1917, 1930, 2098
AcoI	YGGCCR	1 cut(s)	1088
AcsI	RAATTY	3 cut(s)	1018, 1318, 2150
AcuI	CTGAAG	1 cut(s)	1170
AcyI	GRCGYC	1 cut(s)	248
AdeI	CACNNNGTG	1 cut(s)	572
AfaI	GTAC	3 cut(s)	386, 1208, 2192
AfiI	CCNNNNNNNGG	4 cut(s)	286, 526, 1351, 1733
AgeI	ACCGGT	2 cut(s)	420, 587
AgsI	TTSAA	6 cut(s)	412, 511, 578, 738, 1166, 1638
Alw21I	GWGCWC	5 cut(s)	349, 1254, 1683, 1962, 2167
Alw26I	GTCTC	9 cut(s)	94, 218, 239, 557, 1289, 1419, 1736, 1777, 1996
Alw44I	GTGCAC	1 cut(s)	2163
AlwI	GGATC	7 cut(s)	271, 996, 1009, 1595, 1917, 1930, 2098
AlwNI	CAGNNNCTG	1 cut(s)	1607
Ama87I	CYCGRG	1 cut(s)	45
ApaLI	GTGCAC	1 cut(s)	2163
ApeKI	GCWGC	9 cut(s)	650, 929, 1040, 1157, 1220, 1577, 2057, 2222, 2238
ApoI	RAATTY	3 cut(s)	1018, 1318, 2150
ArsI	GACNNNNNNTTYG	2 cut(s)	845, 877
AsiGI	ACCGGT	2 cut(s)	420, 587
Asp700I	GAANNNNTTC	1 cut(s)	515
AspLEI	GCGC	1 cut(s)	1455
AspS9I	GGNCC	7 cut(s)	34, 43, 210, 590, 628, 1658, 1752
AsuC2I	CCSGG	4 cut(s)	209, 570, 1292, 1697
AsuHPI	GGTGA	8 cut(s)	280, 314, 722, 832, 904, 991, 1259, 2191
AsuII	TTCGAA	1 cut(s)	1349
AvaI	CYCGRG	1 cut(s)	45
AvaII	GGWCC	2 cut(s)	590, 1658
BaeGI	GKGCMC	1 cut(s)	2167
BaeI	ACNNNNGTAYC	2 cut(s)	475, 508
BalI	TGGCCA	1 cut(s)	1090
BamHI	GGATCC	2 cut(s)	1001, 1922
BanII	GRGCYC	2 cut(s)	1254, 1962
BarI	GAAGNNNNNNTAC	2 cut(s)	1847, 1879
BbsI	GAAGAC	1 cut(s)	1982
Bbv12I	GWGCWC	5 cut(s)	349, 1254, 1683, 1962, 2167
BbvI	GCAGC	8 cut(s)	637, 916, 1027, 1144, 1207, 1564, 2044, 2234
BceAI	ACGGC	3 cut(s)	79, 142, 2209
BciVI	GTATCC	1 cut(s)	476
BcnI	CCSGG	4 cut(s)	209, 570, 1292, 1697
BcoDI	GTCTC	9 cut(s)	94, 218, 239, 557, 1289, 1419, 1736, 1777, 1996
BfaI	CTAG	1 cut(s)	2242
BfmI	CTRYAG	2 cut(s)	1221, 1756
BfuI	GTATCC	1 cut(s)	476
BglI	GCCNNNNNGGC	1 cut(s)	41
BglII	AGATCT	1 cut(s)	1384
Bme18I	GGWCC	2 cut(s)	590, 1658
BmeT110I	CYCGRG	1 cut(s)	45
BmgT120I	GGNCC	7 cut(s)	34, 43, 210, 590, 628, 1658, 1752
BmiI	GGNNCC	7 cut(s)	67, 1003, 1051, 1136, 1492, 1753, 1924
BmrI	ACTGGG	1 cut(s)	918
BmsI	GCATC	5 cut(s)	1054, 1297, 1707, 2020, 2205
BmuI	ACTGGG	1 cut(s)	918
BpiI	GAAGAC	1 cut(s)	1982
BplI	GAGNNNNNCTC	2 cut(s)	1217, 1249
BpmI	CTGGAG	2 cut(s)	1153, 1629
Bpu14I	TTCGAA	1 cut(s)	1349
BpuEI	CTTGAG	2 cut(s)	1311, 2102
BpuMI	CCSGG	4 cut(s)	209, 570, 1292, 1697
BsaAI	YACGTR	1 cut(s)	1210
BsaHI	GRCGYC	1 cut(s)	248
BsaI	GGTCTC	2 cut(s)	1289, 1777
BsaWI	WCCGGW	3 cut(s)	279, 420, 587
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 62, 74, 80, 92, 104
Bsc4I	CCNNNNNNNGG	4 cut(s)	286, 526, 1351, 1733
Bse118I	RCCGGY	6 cut(s)	125, 183, 198, 420, 587, 2053
Bse1I	ACTGG	3 cut(s)	410, 913, 1136
Bse3DI	GCAATG	2 cut(s)	1462, 1707
BseGI	GGATG	3 cut(s)	347, 1091, 1491
BseLI	CCNNNNNNNGG	4 cut(s)	286, 526, 1351, 1733
BseMI	GCAATG	2 cut(s)	1462, 1707
BseMII	CTCAG	4 cut(s)	543, 627, 819, 1975
BseNI	ACTGG	3 cut(s)	410, 913, 1136
BseSI	GKGCMC	1 cut(s)	2167
BseXI	GCAGC	8 cut(s)	637, 916, 1027, 1144, 1207, 1564, 2044, 2234
BseYI	CCCAGC	3 cut(s)	1300, 1726, 1748
BsgI	GTGCAG	3 cut(s)	1026, 1143, 1401
Bsh1236I	CGCG	1 cut(s)	218
Bsh1285I	CGRYCG	2 cut(s)	85, 222
BshTI	ACCGGT	2 cut(s)	420, 587
BsiEI	CGRYCG	2 cut(s)	85, 222
BsiHKAI	GWGCWC	5 cut(s)	349, 1254, 1683, 1962, 2167
BsiHKCI	CYCGRG	1 cut(s)	45
BslFI	GGGAC	2 cut(s)	13, 783
BslI	CCNNNNNNNGG	4 cut(s)	286, 526, 1351, 1733
BsmAI	GTCTC	9 cut(s)	94, 218, 239, 557, 1289, 1419, 1736, 1777, 1996
BsmBI	CGTCTC	1 cut(s)	239
BsmFI	GGGAC	2 cut(s)	13, 783
BsmI	GAATGC	2 cut(s)	836, 1183
Bso31I	GGTCTC	2 cut(s)	1289, 1777
BsoBI	CYCGRG	1 cut(s)	45
Bsp119I	TTCGAA	1 cut(s)	1349
Bsp1286I	GDGCHC	5 cut(s)	349, 1254, 1683, 1962, 2167
Bsp143I	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
Bsp19I	CCATGG	1 cut(s)	336
BspCNI	CTCAG	4 cut(s)	544, 628, 820, 1974
BspFNI	CGCG	1 cut(s)	218
BspHI	TCATGA	1 cut(s)	378
BspLI	GGNNCC	7 cut(s)	67, 1003, 1051, 1136, 1492, 1753, 1924
BspMAI	CTGCAG	1 cut(s)	1225
BspPI	GGATC	7 cut(s)	271, 996, 1009, 1595, 1917, 1930, 2098
BspQI	GCTCTTC	1 cut(s)	1443
BspT104I	TTCGAA	1 cut(s)	1349
BspTNI	GGTCTC	2 cut(s)	1289, 1777
BsrDI	GCAATG	2 cut(s)	1462, 1707
BsrFI	RCCGGY	6 cut(s)	125, 183, 198, 420, 587, 2053
BsrI	ACTGG	3 cut(s)	410, 913, 1136
BssAI	RCCGGY	6 cut(s)	125, 183, 198, 420, 587, 2053
BssMI	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
BssNI	GRCGYC	1 cut(s)	248
BssT1I	CCWWGG	2 cut(s)	336, 1053
Bst4CI	ACNGT	8 cut(s)	86, 416, 446, 491, 674, 1028, 1981, 2203
Bst6I	CTCTTC	5 cut(s)	169, 506, 1443, 1775, 1888
BstACI	GRCGYC	1 cut(s)	248
BstAPI	GCANNNNNTGC	1 cut(s)	1388
BstBAI	YACGTR	1 cut(s)	1210
BstBI	TTCGAA	1 cut(s)	1349
BstC8I	GCNNGC	4 cut(s)	127, 185, 1951, 2055
BstDEI	CTNAG	4 cut(s)	552, 636, 828, 1961
BstDSI	CCRYGG	3 cut(s)	61, 216, 336
BstEII	GGTNACC	1 cut(s)	320
BstENI	CCTNNNNNAGG	1 cut(s)	1349
BstF5I	GGATG	3 cut(s)	347, 1091, 1491
BstFNI	CGCG	1 cut(s)	218
BstHHI	GCGC	1 cut(s)	1455
BstKTI	GATC	7 cut(s)	279, 681, 1004, 1387, 1590, 1925, 2093
BstMAI	GTCTC	9 cut(s)	94, 218, 239, 557, 1289, 1419, 1736, 1777, 1996
BstMBI	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
BstMCI	CGRYCG	2 cut(s)	85, 222
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 177, 296, 755, 1096, 1166, 1187, 1388, 2066
BstPI	GGTNACC	1 cut(s)	320
BstSFI	CTRYAG	2 cut(s)	1221, 1756
BstSLI	GKGCMC	1 cut(s)	2167
BstUI	CGCG	1 cut(s)	218
BstV1I	GCAGC	8 cut(s)	637, 916, 1027, 1144, 1207, 1564, 2044, 2234
BstV2I	GAAGAC	1 cut(s)	1982
BstX2I	RGATCY	4 cut(s)	1001, 1384, 1587, 1922
BstXI	CCANNNNNNTGG	1 cut(s)	479
BstYI	RGATCY	4 cut(s)	1001, 1384, 1587, 1922
BsuI	GTATCC	1 cut(s)	476
BtgI	CCRYGG	3 cut(s)	61, 216, 336
BtgZI	GCGATG	2 cut(s)	138, 1968
BtsCI	GGATG	3 cut(s)	347, 1091, 1491
BtsIMutI	CAGTG	7 cut(s)	496, 679, 906, 1033, 1129, 1146, 1560
Cac8I	GCNNGC	4 cut(s)	127, 185, 1951, 2055
CaiI	CAGNNNCTG	1 cut(s)	1607
CciI	TCATGA	1 cut(s)	378
CfoI	GCGC	1 cut(s)	1455
Cfr10I	RCCGGY	6 cut(s)	125, 183, 198, 420, 587, 2053
Cfr13I	GGNCC	7 cut(s)	34, 43, 210, 590, 628, 1658, 1752
Cfr42I	CCGCGG	1 cut(s)	219
CseI	GACGC	1 cut(s)	305
Csp6I	GTAC	3 cut(s)	385, 1207, 2191
CspAI	ACCGGT	2 cut(s)	420, 587
CspCI	CAANNNNNGTGG	2 cut(s)	1534, 1569
CviAII	CATG	6 cut(s)	337, 379, 1034, 1106, 1402, 1481
CviQI	GTAC	3 cut(s)	385, 1207, 2191
DdeI	CTNAG	4 cut(s)	552, 636, 828, 1961
DpnI	GATC	7 cut(s)	278, 680, 1003, 1386, 1589, 1924, 2092
DpnII	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
DraIII	CACNNNGTG	1 cut(s)	572
EaeI	YGGCCR	1 cut(s)	1088
Eam1104I	CTCTTC	5 cut(s)	169, 506, 1443, 1775, 1888
EarI	CTCTTC	5 cut(s)	169, 506, 1443, 1775, 1888
EciI	GGCGGA	2 cut(s)	88, 1712
Ecl136II	GAGCTC	2 cut(s)	1252, 1960
Eco130I	CCWWGG	2 cut(s)	336, 1053
Eco24I	GRGCYC	2 cut(s)	1254, 1962
Eco31I	GGTCTC	2 cut(s)	1289, 1777
Eco47I	GGWCC	2 cut(s)	590, 1658
Eco53kI	GAGCTC	2 cut(s)	1252, 1960
Eco57I	CTGAAG	1 cut(s)	1170
Eco88I	CYCGRG	1 cut(s)	45
Eco91I	GGTNACC	1 cut(s)	320
EcoICRI	GAGCTC	2 cut(s)	1252, 1960
EcoNI	CCTNNNNNAGG	1 cut(s)	1349
EcoO109I	RGGNCCY	2 cut(s)	34, 1752
EcoO65I	GGTNACC	1 cut(s)	320
EcoT14I	CCWWGG	2 cut(s)	336, 1053
EcoT38I	GRGCYC	2 cut(s)	1254, 1962
ErhI	CCWWGG	2 cut(s)	336, 1053
Esp3I	CGTCTC	1 cut(s)	239
FaeI	CATG	6 cut(s)	340, 382, 1037, 1109, 1405, 1484
FalI	AAGNNNNNCTT	2 cut(s)	1320, 1352
FaqI	GGGAC	2 cut(s)	13, 783
FatI	CATG	6 cut(s)	336, 378, 1033, 1105, 1401, 1480
FauI	CCCGC	2 cut(s)	176, 751
FauNDI	CATATG	1 cut(s)	1093
FblI	GTMKAC	2 cut(s)	11, 684
FokI	GGATG	3 cut(s)	354, 1098, 1498
FriOI	GRGCYC	2 cut(s)	1254, 1962
FspBI	CTAG	1 cut(s)	2242
GlaI	GCGC	1 cut(s)	1454
GsaI	CCCAGC	3 cut(s)	1304, 1730, 1752
GsuI	CTGGAG	2 cut(s)	1153, 1629
HgaI	GACGC	1 cut(s)	305
HhaI	GCGC	1 cut(s)	1455
Hin1I	GRCGYC	1 cut(s)	248
Hin1II	CATG	6 cut(s)	340, 382, 1037, 1109, 1405, 1484
Hin6I	GCGC	1 cut(s)	1453
HinP1I	GCGC	1 cut(s)	1453
HincII	GTYRAC	2 cut(s)	685, 853
HindII	GTYRAC	2 cut(s)	685, 853
HinfI	GANTC	5 cut(s)	226, 922, 1531, 1634, 1848
HphI	GGTGA	8 cut(s)	280, 314, 722, 832, 904, 991, 1259, 2191
Hpy166II	GTNNAC	5 cut(s)	12, 271, 685, 853, 2165
Hpy188I	TCNGA	7 cut(s)	82, 351, 1603, 1876, 1927, 1964, 2029
Hpy188III	TCNNGA	6 cut(s)	223, 230, 379, 1432, 1806, 1852
Hpy8I	GTNNAC	5 cut(s)	12, 271, 685, 853, 2165
Hpy99I	CGWCG	3 cut(s)	253, 374, 686
HpyAV	CCTTC	7 cut(s)	301, 799, 1145, 1345, 1523, 1849, 1964
HpyCH4III	ACNGT	8 cut(s)	86, 416, 446, 491, 674, 1028, 1981, 2203
HpyCH4IV	ACGT	3 cut(s)	248, 882, 1209
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 177, 296, 755, 1096, 1166, 1187, 1388, 2066
HpyF3I	CTNAG	4 cut(s)	552, 636, 828, 1961
HpySE526I	ACGT	3 cut(s)	248, 882, 1209
Hsp92I	GRCGYC	1 cut(s)	248
Hsp92II	CATG	6 cut(s)	340, 382, 1037, 1109, 1405, 1484
HspAI	GCGC	1 cut(s)	1453
KroI	GCCGGC	3 cut(s)	125, 183, 2053
KroNI	GCCGGC	3 cut(s)	127, 185, 2055
KspI	CCGCGG	1 cut(s)	219
Kzo9I	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
LguI	GCTCTTC	1 cut(s)	1443
LmnI	GCTCC	8 cut(s)	71, 117, 352, 474, 1134, 1257, 1490, 1725
Lsp1109I	GCAGC	8 cut(s)	637, 916, 1027, 1144, 1207, 1564, 2044, 2234
LweI	GCATC	5 cut(s)	1054, 1297, 1707, 2020, 2205
MaeI	CTAG	1 cut(s)	2242
MaeII	ACGT	3 cut(s)	248, 882, 1209
MalI	GATC	7 cut(s)	278, 680, 1003, 1386, 1589, 1924, 2092
MboI	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
MfeI	CAATTG	2 cut(s)	1638, 2136
MflI	RGATCY	4 cut(s)	1001, 1384, 1587, 1922
MhlI	GDGCHC	5 cut(s)	349, 1254, 1683, 1962, 2167
MlsI	TGGCCA	1 cut(s)	1090
MluCI	AATT	7 cut(s)	313, 1018, 1318, 1638, 1935, 2136, 2150
MluNI	TGGCCA	1 cut(s)	1090
MlyI	GAGTC	2 cut(s)	220, 1857
MmeI	TCCRAC	4 cut(s)	93, 105, 1911, 2098
Mox20I	TGGCCA	1 cut(s)	1090
MroNI	GCCGGC	3 cut(s)	125, 183, 2053
MroXI	GAANNNNTTC	1 cut(s)	515
MscI	TGGCCA	1 cut(s)	1090
MseI	TTAA	5 cut(s)	936, 975, 1122, 1242, 1338
MslI	CAYNNNNRTG	2 cut(s)	1715, 2101
Msp20I	TGGCCA	1 cut(s)	1090
MspA1I	CMGCKG	4 cut(s)	218, 1304, 1730, 2171
MunI	CAATTG	2 cut(s)	1638, 2136
Mva1269I	GAATGC	2 cut(s)	836, 1183
MvnI	CGCG	1 cut(s)	218
MwoI	GCNNNNNNNGC	9 cut(s)	41, 177, 296, 755, 1096, 1166, 1187, 1388, 2066
NaeI	GCCGGC	3 cut(s)	127, 185, 2055
NciI	CCSGG	4 cut(s)	209, 570, 1292, 1697
NcoI	CCATGG	1 cut(s)	336
NdeI	CATATG	1 cut(s)	1093
NdeII	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
NgoMIV	GCCGGC	3 cut(s)	125, 183, 2053
NlaIII	CATG	6 cut(s)	340, 382, 1037, 1109, 1405, 1484
NlaIV	GGNNCC	7 cut(s)	67, 1003, 1051, 1136, 1492, 1753, 1924
NmuCI	GTSAC	6 cut(s)	320, 416, 580, 952, 979, 1127
NspV	TTCGAA	1 cut(s)	1349
PagI	TCATGA	1 cut(s)	378
PciSI	GCTCTTC	1 cut(s)	1443
PcsI	WCGNNNNNNNCGW	3 cut(s)	155, 272, 2199
PctI	GAATGC	2 cut(s)	836, 1183
PdiI	GCCGGC	3 cut(s)	127, 185, 2055
PdmI	GAANNNNTTC	1 cut(s)	515
PfeI	GAWTC	3 cut(s)	922, 1531, 1634
PflFI	GACNNNGTC	3 cut(s)	7, 86, 491
PflMI	CCANNNNNTGG	1 cut(s)	1733
PfoI	TCCNGGA	1 cut(s)	1828
PinAI	ACCGGT	2 cut(s)	420, 587
PleI	GAGTC	2 cut(s)	220, 1856
PpsI	GAGTC	2 cut(s)	220, 1856
Ppu21I	YACGTR	1 cut(s)	1210
Psp124BI	GAGCTC	2 cut(s)	1254, 1962
PspEI	GGTNACC	1 cut(s)	320
PspFI	CCCAGC	3 cut(s)	1300, 1726, 1748
PspN4I	GGNNCC	7 cut(s)	67, 1003, 1051, 1136, 1492, 1753, 1924
PspPI	GGNCC	7 cut(s)	34, 43, 210, 590, 628, 1658, 1752
PstI	CTGCAG	1 cut(s)	1225
PstNI	CAGNNNCTG	1 cut(s)	1607
PsuI	RGATCY	4 cut(s)	1001, 1384, 1587, 1922
PsyI	GACNNNGTC	3 cut(s)	7, 86, 491
PvuII	CAGCTG	3 cut(s)	1304, 1730, 2171
RsaI	GTAC	3 cut(s)	386, 1208, 2192
RsaNI	GTAC	3 cut(s)	385, 1207, 2191
RseI	CAYNNNNRTG	2 cut(s)	1715, 2101
SacI	GAGCTC	2 cut(s)	1254, 1962
SacII	CCGCGG	1 cut(s)	219
SalI	GTCGAC	1 cut(s)	683
SapI	GCTCTTC	1 cut(s)	1443
SaqAI	TTAA	5 cut(s)	936, 975, 1122, 1242, 1338
Sau3AI	GATC	7 cut(s)	276, 678, 1001, 1384, 1587, 1922, 2090
Sau96I	GGNCC	7 cut(s)	34, 43, 210, 590, 628, 1658, 1752
SchI	GAGTC	2 cut(s)	220, 1857
SduI	GDGCHC	5 cut(s)	349, 1254, 1683, 1962, 2167
SfaNI	GCATC	5 cut(s)	1054, 1297, 1707, 2020, 2205
SfcI	CTRYAG	2 cut(s)	1221, 1756
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
Sfr303I	CCGCGG	1 cut(s)	219
SfuI	TTCGAA	1 cut(s)	1349
SgrBI	CCGCGG	1 cut(s)	219
SinI	GGWCC	2 cut(s)	590, 1658
SmiMI	CAYNNNNRTG	2 cut(s)	1715, 2101
SmlI	CTYRAG	2 cut(s)	1326, 2081
SmoI	CTYRAG	2 cut(s)	1326, 2081
Sse9I	AATT	7 cut(s)	313, 1018, 1318, 1638, 1935, 2136, 2150
SspMI	CTAG	1 cut(s)	2242
SstI	GAGCTC	2 cut(s)	1254, 1962
StyI	CCWWGG	2 cut(s)	336, 1053
TaaI	ACNGT	8 cut(s)	86, 416, 446, 491, 674, 1028, 1981, 2203
TaiI	ACGT	3 cut(s)	251, 885, 1212
TaqI	TCGA	6 cut(s)	222, 684, 925, 1349, 1807, 1851
TasI	AATT	7 cut(s)	313, 1018, 1318, 1638, 1935, 2136, 2150
TauI	GCSGC	4 cut(s)	183, 215, 218, 1140
TfiI	GAWTC	3 cut(s)	922, 1531, 1634
Tru1I	TTAA	5 cut(s)	936, 975, 1122, 1242, 1338
Tru9I	TTAA	5 cut(s)	936, 975, 1122, 1242, 1338
TscAI	CASTG	7 cut(s)	496, 679, 913, 1033, 1136, 1153, 1567
TseFI	GTSAC	6 cut(s)	320, 416, 580, 952, 979, 1127
TseI	GCWGC	9 cut(s)	650, 929, 1040, 1157, 1220, 1577, 2057, 2222, 2238
Tsp45I	GTSAC	6 cut(s)	320, 416, 580, 952, 979, 1127
TspDTI	ATGAA	3 cut(s)	756, 1011, 1022
TspGWI	ACGGA	2 cut(s)	7, 509
TspRI	CASTG	7 cut(s)	496, 679, 913, 1033, 1136, 1153, 1567
Tth111I	GACNNNGTC	3 cut(s)	7, 86, 491
Van91I	CCANNNNNTGG	1 cut(s)	1733
VneI	GTGCAC	1 cut(s)	2163
VpaK11BI	GGWCC	2 cut(s)	590, 1658
XagI	CCTNNNNNAGG	1 cut(s)	1349
XapI	RAATTY	3 cut(s)	1018, 1318, 2150
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1078, 1637
XmiI	GTMKAC	2 cut(s)	11, 684
XmnI	GAANNNNTTC	1 cut(s)	515
XspI	CTAG	1 cut(s)	2242
ZraI	GACGTC	1 cut(s)	249

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.