Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00272

Orthogroup ID

OG0009245

Physical Location & Seq

Genomic Coordinates Reverse (-)

21210 .. 25169

Gene Structure 3960 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G007600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1581 bp

ATGACTTCCTCTTCCTCCGTCACTCTCTCCCAGGCCCTCCTGGCCCGGGCCATTTCCCACCACGGCTCCAACTCCACCTCCGACCGCGTCTCCCTCTCCTCCGCCCTCTCCCTCCCCACCTTCTCCGGCCTCAAATCCACCTCATCGTCGGCGACTTCTGCATCATCCAAGGCCCCCCGCGTCCCCAGGCGCCGGTTGGGCGCCGCCAGGCCGGTCCGGGCTGCTGCCGTGGAGACTCTCGACAAGACTACCGAGACCTCGCTGGTGGAGAAGTCTGTGAACACGATCCGGTTCTTGGCGATTGATGCTGTCGAGAAGGCTAACTCCGGTCACCCCGGTCTGCCCATGGGTTGTGCTCCGATGGGTCATATTTTGTATGACGAGATCATGAGGTACAACCCCAAGAACCCTTACTGGTTCAACCGTGACAGGTTCGTGTTGTCTGCTGGACACGGGTGTATGCTGCAGTACGCTCTGCTTCACCTTGCCGGATACGACAGTGTCAAGGAAGAGGACTTGAAGAGCTTCAGGCAATGGGGAAGCAAGACCCCAGGACATCCCGAGAACTTTGAGACACCTGGTGTTGAAGTCACCACCGGTCCTTTGGGGCAAGGTATTGCAAATGCTGTTGGTCTGGCCCTTGCTGAGAAGCACTTGGCTGCACGTTACAACAAGCCAGACAGTGAGATTGTTGACCACTACACATATTGTATATTGGGTGATGGTTGTCAGATGGAGGGTATTTCTAATGAAGTTGCTTCCCTTGCTGGGCATTGGGGACTTGGAAAGCTGATAGCCTTCTATGACGACAACCACATTTCCATTGATGGAGACACTGAGATTGCATTCACCGAGAGTGTTGATACCCGTTTTGAGGGTCTCGGGTGGCACATTATCTGGGTGAAGAATGGAAATACCGGGTATGATGAGATTAGAGCTGCCATTAAGGAAGCAAAGGCTGTGACAGACAAGCCCACTTTGATAAAGGTGACAACAACCATTGGTTTTGGATCTCCAAACAAGGCAAACTCATACAGTGTCCATGGTGCTGCACTGGGTGCCAAGGAAGTTGATGCTACCAGACAGAACCTTGGATGGCCTTATGAGCCTTTCCACGTGCCAGAGGATGTTAAAAGTCACTGGAGTCGCCATACTGCAGAAGGTTCAGCCCTTGAAGCTGAATGGAATGCCAAGTTTGCTGAATATGAGAAGAAGTATGCAGAGGAAGCTGCAGAGCTGAAGTCCATCATCACTGGTGAGCTACCGGCTGGTTGGGAAAAGGCTCTCCCGACTTACACTCCAGAAGTCCCAGCTGATGCTACCAGGAATTTATCTCAGGCAAACCTCAATGCCCTTGCAAAAGTTCTTCCCGGTCTTGTTGGTGGCAGTGCAGATCTTGCTTCTTCCAACATGACTTTGATGAAAATGTTTGGAGATTTCCAGAAGGGTACCCCAGAAGAACGCAATATTAGGTTTGGTGTTAGGGAGCATGGGATGGGAGCCATCTGCAACGGAATTGCTCTTCACAGCCCCGGATTTATTCCTACTGTGCCACTTTCTTTGTTTTCACTGACTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004802 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016740 GO:0016744 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00030 ko00710 ko01051 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00710 map01051 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C Transketolase_N

Protein Analysis

526

Amino Acids

56.73

Weight (kDa)

6.15

Isoelectric Point (pI)

32.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transketolase_N	PF00456	91 - 422	1.9e-153	Transketolase, thiamine diphosphate binding domain
Transket_pyr	PF02779	440 - 515	1.9e-14	Transketolase, pyrimidine binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45290 AT2G45290 AT3G60750 AT3G60750
fragaria_vesca	FvH4_7g11510 FvH4_7g11510 FvH4_7g11510 FvH4_7g11510
malus_domestica	MD02G1207200.v1.1 MD07G1119500.v1.1
prunus_persica	Prupe.2G143600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0349951
rosa_laevigata	RLG00000028513
rosa_multiflora	Rmu_co8514097.1_g000001 Rmu_sc0000778.1_g000002 Rmu_sc0005220.1_g000014
rosa_roxburghii	Rroxscaffold_4G00305250
rosa_rugosa	Rorug01G0207300
rosa_samantha	Rh1BG191100 Rh1CG208600 Rh1DG219700
rosa_wichuraiana	Rw0G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1448
AccB1I	GGYRCC	4 cut(s)	189, 200, 1058, 1448
AccII	CGCG	2 cut(s)	87, 180
AciI	CCGC	4 cut(s)	85, 102, 178, 204
AclWI	GGATC	2 cut(s)	280, 1018
AcsI	RAATTY	1 cut(s)	1327
AcuI	CTGAAG	2 cut(s)	511, 1259
AcvI	CACGTG	1 cut(s)	1117
AcyI	GRCGYC	2 cut(s)	190, 201
AdeI	CACNNNGTG	2 cut(s)	581, 1058
AfaI	GTAC	3 cut(s)	395, 470, 1450
AfiI	CCNNNNNNNGG	5 cut(s)	46, 192, 295, 768, 874
AgeI	ACCGGT	1 cut(s)	596
AgsI	TTSAA	4 cut(s)	421, 520, 587, 1175
AjnI	CCWGG	7 cut(s)	30, 39, 185, 206, 550, 577, 1322
AluBI	AGCT	8 cut(s)	525, 790, 938, 1178, 1229, 1237, 1261, 1313
AluI	AGCT	8 cut(s)	525, 790, 938, 1178, 1229, 1237, 1261, 1313
Alw21I	GWGCWC	1 cut(s)	358
Alw26I	GTCTC	6 cut(s)	94, 227, 248, 566, 825, 884
AlwI	GGATC	2 cut(s)	280, 1018
Ama87I	CYCGRG	3 cut(s)	45, 560, 881
AoxI	GGCC	8 cut(s)	33, 42, 48, 127, 171, 209, 636, 1097
ApeKI	GCWGC	7 cut(s)	221, 224, 463, 659, 938, 1049, 1229
ApoI	RAATTY	1 cut(s)	1327
AsiGI	ACCGGT	1 cut(s)	596
Asp700I	GAANNNNTTC	1 cut(s)	524
Asp718I	GGTACC	1 cut(s)	1448
AspLEI	GCGC	2 cut(s)	192, 203
AspS9I	GGNCC	7 cut(s)	34, 43, 48, 172, 214, 599, 637
AsuC2I	CCSGG	7 cut(s)	46, 47, 218, 336, 919, 1371, 1533
AsuHPI	GGTGA	8 cut(s)	323, 473, 583, 731, 841, 913, 1000, 1268
AvaI	CYCGRG	3 cut(s)	45, 560, 881
AvaII	GGWCC	2 cut(s)	214, 599
BaeI	ACNNNNGTAYC	2 cut(s)	484, 517
BanI	GGYRCC	4 cut(s)	189, 200, 1058, 1448
BbrPI	CACGTG	1 cut(s)	1117
Bbv12I	GWGCWC	1 cut(s)	358
BbvI	GCAGC	7 cut(s)	208, 211, 450, 646, 925, 1036, 1216
BccI	CCATC	8 cut(s)	355, 716, 727, 821, 1089, 1253, 1489, 1511
BceAI	ACGGC	2 cut(s)	79, 212
BciT130I	CCWGG	7 cut(s)	32, 41, 187, 208, 552, 579, 1324
BciVI	GTATCC	1 cut(s)	485
BcnI	CCSGG	7 cut(s)	46, 47, 218, 336, 919, 1371, 1533
BcoDI	GTCTC	6 cut(s)	94, 227, 248, 566, 825, 884
BfmI	CTRYAG	3 cut(s)	464, 1155, 1230
BfoI	RGCGCY	2 cut(s)	193, 204
BfuI	GTATCC	1 cut(s)	485
BglI	GCCNNNNNGGC	2 cut(s)	41, 198
BglII	AGATCT	1 cut(s)	1393
BisI	GCNGC	8 cut(s)	204, 222, 225, 464, 660, 939, 1050, 1230
BlsI	GCNGC	8 cut(s)	205, 223, 226, 465, 661, 940, 1051, 1231
Bme18I	GGWCC	2 cut(s)	214, 599
BmeT110I	CYCGRG	3 cut(s)	45, 560, 881
BmgT120I	GGNCC	7 cut(s)	34, 43, 48, 172, 214, 599, 637
BmiI	GGNNCC	7 cut(s)	67, 174, 191, 202, 1060, 1450, 1501
BmrI	ACTGGG	1 cut(s)	1064
BmsI	GCATC	4 cut(s)	170, 295, 1063, 1306
BmuI	ACTGGG	1 cut(s)	1064
BpmI	CTGGAG	2 cut(s)	1162, 1284
BpuMI	CCSGG	7 cut(s)	46, 47, 218, 336, 919, 1371, 1533
BsaAI	YACGTR	1 cut(s)	1117
BsaHI	GRCGYC	2 cut(s)	190, 201
BsaI	GGTCTC	2 cut(s)	248, 884
BsaWI	WCCGGW	3 cut(s)	288, 326, 596
BsaXI	ACNNNNNCTCC	8 cut(s)	50, 62, 74, 80, 92, 104, 1282, 1312
Bsc4I	CCNNNNNNNGG	5 cut(s)	46, 192, 295, 768, 874
Bse118I	RCCGGY	4 cut(s)	192, 211, 596, 1264
Bse1I	ACTGG	4 cut(s)	419, 1059, 1145, 1258
Bse3DI	GCAATG	1 cut(s)	539
BseBI	CCWGG	7 cut(s)	32, 41, 187, 208, 552, 579, 1324
BseGI	GGATG	5 cut(s)	164, 556, 1100, 1132, 1500
BseLI	CCNNNNNNNGG	5 cut(s)	46, 192, 295, 768, 874
BseMI	GCAATG	1 cut(s)	539
BseMII	CTCAG	3 cut(s)	636, 828, 1349
BseNI	ACTGG	4 cut(s)	419, 1059, 1145, 1258
BseRI	GAGGAG	1 cut(s)	88
BseXI	GCAGC	7 cut(s)	208, 211, 450, 646, 925, 1036, 1216
BseYI	CCCAGC	2 cut(s)	767, 1309
BsgI	GTGCAG	3 cut(s)	645, 1035, 1410
Bsh1236I	CGCG	2 cut(s)	87, 180
Bsh1285I	CGRYCG	1 cut(s)	85
BshFI	GGCC	8 cut(s)	35, 44, 50, 129, 173, 211, 638, 1099
BshNI	GGYRCC	4 cut(s)	189, 200, 1058, 1448
BshTI	ACCGGT	1 cut(s)	596
BsiEI	CGRYCG	1 cut(s)	85
BsiHKAI	GWGCWC	1 cut(s)	358
BsiHKCI	CYCGRG	3 cut(s)	45, 560, 881
BslFI	GGGAC	3 cut(s)	167, 792, 1292
BslI	CCNNNNNNNGG	5 cut(s)	46, 192, 295, 768, 874
BsmAI	GTCTC	6 cut(s)	94, 227, 248, 566, 825, 884
BsmBI	CGTCTC	1 cut(s)	94
BsmFI	GGGAC	3 cut(s)	167, 792, 1292
BsmI	GAATGC	2 cut(s)	845, 1192
BsnI	GGCC	8 cut(s)	35, 44, 50, 129, 173, 211, 638, 1099
Bso31I	GGTCTC	2 cut(s)	248, 884
BsoBI	CYCGRG	3 cut(s)	45, 560, 881
Bsp1286I	GDGCHC	1 cut(s)	358
Bsp143I	GATC	4 cut(s)	285, 384, 1010, 1393
Bsp19I	CCATGG	2 cut(s)	345, 1042
BspACI	CCGC	4 cut(s)	85, 102, 178, 204
BspANI	GGCC	8 cut(s)	35, 44, 50, 129, 173, 211, 638, 1099
BspCNI	CTCAG	3 cut(s)	637, 829, 1348
BspFNI	CGCG	2 cut(s)	87, 180
BspHI	TCATGA	1 cut(s)	387
BspLI	GGNNCC	7 cut(s)	67, 174, 191, 202, 1060, 1450, 1501
BspMAI	CTGCAG	3 cut(s)	468, 1159, 1234
BspPI	GGATC	2 cut(s)	280, 1018
BspQI	GCTCTTC	2 cut(s)	515, 1527
BspT107I	GGYRCC	4 cut(s)	189, 200, 1058, 1448
BspTNI	GGTCTC	2 cut(s)	248, 884
BsrDI	GCAATG	1 cut(s)	539
BsrFI	RCCGGY	4 cut(s)	192, 211, 596, 1264
BsrI	ACTGG	4 cut(s)	419, 1059, 1145, 1258
BssAI	RCCGGY	4 cut(s)	192, 211, 596, 1264
BssMI	GATC	4 cut(s)	285, 384, 1010, 1393
BssNI	GRCGYC	2 cut(s)	190, 201
BssT1I	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
Bst2UI	CCWGG	7 cut(s)	32, 41, 187, 208, 552, 579, 1324
Bst4CI	ACNGT	5 cut(s)	425, 500, 683, 1037, 1549
Bst6I	CTCTTC	4 cut(s)	16, 504, 515, 1527
BstACI	GRCGYC	2 cut(s)	190, 201
BstAPI	GCANNNNNTGC	2 cut(s)	1058, 1397
BstBAI	YACGTR	1 cut(s)	1117
BstDEI	CTNAG	3 cut(s)	645, 837, 1335
BstDSI	CCRYGG	4 cut(s)	61, 228, 345, 1042
BstEII	GGTNACC	1 cut(s)	329
BstF5I	GGATG	5 cut(s)	164, 556, 1100, 1132, 1500
BstFNI	CGCG	2 cut(s)	87, 180
BstH2I	RGCGCY	2 cut(s)	193, 204
BstHHI	GCGC	2 cut(s)	192, 203
BstKTI	GATC	4 cut(s)	288, 387, 1013, 1396
BstMAI	GTCTC	6 cut(s)	94, 227, 248, 566, 825, 884
BstMBI	GATC	4 cut(s)	285, 384, 1010, 1393
BstMCI	CGRYCG	1 cut(s)	85
BstNI	CCWGG	7 cut(s)	32, 41, 187, 208, 552, 579, 1324
BstPI	GGTNACC	1 cut(s)	329
BstSFI	CTRYAG	3 cut(s)	464, 1155, 1230
BstUI	CGCG	2 cut(s)	87, 180
BstV1I	GCAGC	7 cut(s)	208, 211, 450, 646, 925, 1036, 1216
BstX2I	RGATCY	2 cut(s)	1010, 1393
BstYI	RGATCY	2 cut(s)	1010, 1393
BsuI	GTATCC	1 cut(s)	485
BsuRI	GGCC	8 cut(s)	35, 44, 50, 129, 173, 211, 638, 1099
BtgI	CCRYGG	4 cut(s)	61, 228, 345, 1042
BtsCI	GGATG	5 cut(s)	164, 556, 1100, 1132, 1500
BtsI	GCAGTG	1 cut(s)	1393
BtsIMutI	CAGTG	9 cut(s)	505, 688, 834, 1042, 1052, 1138, 1251, 1393, 1568
CciI	TCATGA	1 cut(s)	387
CfoI	GCGC	2 cut(s)	192, 203
Cfr10I	RCCGGY	4 cut(s)	192, 211, 596, 1264
Cfr13I	GGNCC	7 cut(s)	34, 43, 48, 172, 214, 599, 637
Cfr9I	CCCGGG	1 cut(s)	45
CpoI	CGGWCCG	1 cut(s)	214
CseI	GACGC	2 cut(s)	76, 169
CsiI	ACCWGGT	1 cut(s)	577
Csp6I	GTAC	3 cut(s)	394, 469, 1449
CspAI	ACCGGT	1 cut(s)	596
CspCI	CAANNNNNGTGG	2 cut(s)	1542, 1577
CspI	CGGWCCG	1 cut(s)	214
CviAII	CATG	6 cut(s)	346, 388, 1043, 1411, 1490, 1578
CviQI	GTAC	3 cut(s)	394, 469, 1449
DdeI	CTNAG	3 cut(s)	645, 837, 1335
DinI	GGCGCC	2 cut(s)	191, 202
DpnI	GATC	4 cut(s)	287, 386, 1012, 1395
DpnII	GATC	4 cut(s)	285, 384, 1010, 1393
DraIII	CACNNNGTG	2 cut(s)	581, 1058
Eam1104I	CTCTTC	4 cut(s)	16, 504, 515, 1527
EarI	CTCTTC	4 cut(s)	16, 504, 515, 1527
EciI	GGCGGA	1 cut(s)	91
Eco130I	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
Eco31I	GGTCTC	2 cut(s)	248, 884
Eco47I	GGWCC	2 cut(s)	214, 599
Eco57I	CTGAAG	2 cut(s)	511, 1259
Eco72I	CACGTG	1 cut(s)	1117
Eco88I	CYCGRG	3 cut(s)	45, 560, 881
Eco91I	GGTNACC	1 cut(s)	329
EcoO109I	RGGNCCY	2 cut(s)	34, 172
EcoO65I	GGTNACC	1 cut(s)	329
EcoRII	CCWGG	7 cut(s)	30, 39, 185, 206, 550, 577, 1322
EcoT14I	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
EgeI	GGCGCC	2 cut(s)	191, 202
EheI	GGCGCC	2 cut(s)	191, 202
ErhI	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
Esp3I	CGTCTC	1 cut(s)	94
FaeI	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1581
FaqI	GGGAC	3 cut(s)	167, 792, 1292
FatI	CATG	6 cut(s)	345, 387, 1042, 1410, 1489, 1577
FauI	CCCGC	1 cut(s)	185
Fnu4HI	GCNGC	8 cut(s)	204, 222, 225, 464, 660, 939, 1050, 1230
FokI	GGATG	5 cut(s)	151, 543, 1107, 1139, 1507
Fsp4HI	GCNGC	8 cut(s)	204, 222, 225, 464, 660, 939, 1050, 1230
GlaI	GCGC	2 cut(s)	191, 202
GluI	GCNGC	8 cut(s)	204, 222, 225, 464, 660, 939, 1050, 1230
GsaI	CCCAGC	2 cut(s)	771, 1313
GsuI	CTGGAG	2 cut(s)	1162, 1284
HaeII	RGCGCY	2 cut(s)	193, 204
HaeIII	GGCC	8 cut(s)	35, 44, 50, 129, 173, 211, 638, 1099
HgaI	GACGC	2 cut(s)	76, 169
HhaI	GCGC	2 cut(s)	192, 203
Hin1I	GRCGYC	2 cut(s)	190, 201
Hin1II	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1581
Hin6I	GCGC	2 cut(s)	190, 201
HinP1I	GCGC	2 cut(s)	190, 201
HincII	GTYRAC	1 cut(s)	694
HindII	GTYRAC	1 cut(s)	694
HinfI	GANTC	2 cut(s)	235, 1144
HphI	GGTGA	8 cut(s)	323, 473, 583, 731, 841, 913, 1000, 1268
Hpy166II	GTNNAC	2 cut(s)	280, 694
Hpy188I	TCNGA	3 cut(s)	82, 360, 732
Hpy188III	TCNNGA	7 cut(s)	239, 313, 388, 560, 1288, 1301, 1441
Hpy8I	GTNNAC	2 cut(s)	280, 694
Hpy99I	CGWCG	1 cut(s)	151
HpyAV	CCTTC	5 cut(s)	130, 310, 808, 1154, 1438
HpyCH4III	ACNGT	5 cut(s)	425, 500, 683, 1037, 1549
HpyCH4IV	ACGT	2 cut(s)	664, 1116
HpyF3I	CTNAG	3 cut(s)	645, 837, 1335
HpySE526I	ACGT	2 cut(s)	664, 1116
Hsp92I	GRCGYC	2 cut(s)	190, 201
Hsp92II	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1581
HspAI	GCGC	2 cut(s)	190, 201
KasI	GGCGCC	2 cut(s)	189, 200
KpnI	GGTACC	1 cut(s)	1452
Kzo9I	GATC	4 cut(s)	285, 384, 1010, 1393
LguI	GCTCTTC	2 cut(s)	515, 1527
LmnI	GCTCC	4 cut(s)	71, 361, 1486, 1499
Lsp1109I	GCAGC	7 cut(s)	208, 211, 450, 646, 925, 1036, 1216
LweI	GCATC	4 cut(s)	170, 295, 1063, 1306
MabI	ACCWGGT	1 cut(s)	577
MaeII	ACGT	2 cut(s)	664, 1116
MaeIII	GTNAC	8 cut(s)	19, 329, 425, 589, 665, 961, 988, 1136
MalI	GATC	4 cut(s)	287, 386, 1012, 1395
MboI	GATC	4 cut(s)	285, 384, 1010, 1393
MboII	GAAGA	9 cut(s)	3, 521, 532, 916, 1222, 1358, 1395, 1469, 1514
MflI	RGATCY	2 cut(s)	1010, 1393
MhlI	GDGCHC	1 cut(s)	358
MluCI	AATT	2 cut(s)	1327, 1515
Mly113I	GGCGCC	2 cut(s)	190, 201
MlyI	GAGTC	2 cut(s)	229, 1153
MmeI	TCCRAC	3 cut(s)	93, 105, 1431
MroXI	GAANNNNTTC	1 cut(s)	524
MseI	TTAA	2 cut(s)	945, 1131
MspA1I	CMGCKG	1 cut(s)	1313
Mva1269I	GAATGC	2 cut(s)	845, 1192
MvaI	CCWGG	7 cut(s)	32, 41, 187, 208, 552, 579, 1324
MvnI	CGCG	2 cut(s)	87, 180
NarI	GGCGCC	2 cut(s)	190, 201
NciI	CCSGG	7 cut(s)	46, 47, 218, 336, 919, 1371, 1533
NcoI	CCATGG	2 cut(s)	345, 1042
NdeII	GATC	4 cut(s)	285, 384, 1010, 1393
NlaIII	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1581
NlaIV	GGNNCC	7 cut(s)	67, 174, 191, 202, 1060, 1450, 1501
NmuCI	GTSAC	7 cut(s)	19, 329, 425, 589, 961, 988, 1136
PagI	TCATGA	1 cut(s)	387
PciSI	GCTCTTC	2 cut(s)	515, 1527
PctI	GAATGC	2 cut(s)	845, 1192
PdmI	GAANNNNTTC	1 cut(s)	524
PflFI	GACNNNGTC	2 cut(s)	86, 500
PinAI	ACCGGT	1 cut(s)	596
PkrI	GCNGC	8 cut(s)	205, 223, 226, 465, 661, 940, 1051, 1231
PleI	GAGTC	2 cut(s)	229, 1152
PluTI	GGCGCC	2 cut(s)	193, 204
PmaCI	CACGTG	1 cut(s)	1117
PmlI	CACGTG	1 cut(s)	1117
PpsI	GAGTC	2 cut(s)	229, 1152
Ppu21I	YACGTR	1 cut(s)	1117
Psp6I	CCWGG	7 cut(s)	30, 39, 185, 206, 550, 577, 1322
PspCI	CACGTG	1 cut(s)	1117
PspEI	GGTNACC	1 cut(s)	329
PspFI	CCCAGC	2 cut(s)	767, 1309
PspGI	CCWGG	7 cut(s)	30, 39, 185, 206, 550, 577, 1322
PspN4I	GGNNCC	7 cut(s)	67, 174, 191, 202, 1060, 1450, 1501
PspPI	GGNCC	7 cut(s)	34, 43, 48, 172, 214, 599, 637
PstI	CTGCAG	3 cut(s)	468, 1159, 1234
PsuI	RGATCY	2 cut(s)	1010, 1393
PsyI	GACNNNGTC	2 cut(s)	86, 500
PvuII	CAGCTG	1 cut(s)	1313
RsaI	GTAC	3 cut(s)	395, 470, 1450
RsaNI	GTAC	3 cut(s)	394, 469, 1449
Rsr2I	CGGWCCG	1 cut(s)	214
RsrII	CGGWCCG	1 cut(s)	214
SapI	GCTCTTC	2 cut(s)	515, 1527
SaqAI	TTAA	2 cut(s)	945, 1131
SatI	GCNGC	8 cut(s)	204, 222, 225, 464, 660, 939, 1050, 1230
Sau3AI	GATC	4 cut(s)	285, 384, 1010, 1393
Sau96I	GGNCC	7 cut(s)	34, 43, 48, 172, 214, 599, 637
SchI	GAGTC	2 cut(s)	229, 1153
SduI	GDGCHC	1 cut(s)	358
SexAI	ACCWGGT	1 cut(s)	577
SfaNI	GCATC	4 cut(s)	170, 295, 1063, 1306
SfcI	CTRYAG	3 cut(s)	464, 1155, 1230
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
SfoI	GGCGCC	2 cut(s)	191, 202
SinI	GGWCC	2 cut(s)	214, 599
SmaI	CCCGGG	1 cut(s)	47
SrfI	GCCCGGGC	1 cut(s)	47
Sse9I	AATT	2 cut(s)	1327, 1515
SsiI	CCGC	4 cut(s)	85, 102, 178, 204
SspDI	GGCGCC	2 cut(s)	189, 200
SspI	AATATT	1 cut(s)	1468
StyI	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
TaaI	ACNGT	5 cut(s)	425, 500, 683, 1037, 1549
TaiI	ACGT	2 cut(s)	667, 1119
TaqI	TCGA	2 cut(s)	240, 312
TasI	AATT	2 cut(s)	1327, 1515
TauI	GCSGC	1 cut(s)	206
Tru1I	TTAA	2 cut(s)	945, 1131
Tru9I	TTAA	2 cut(s)	945, 1131
TscAI	CASTG	9 cut(s)	505, 688, 841, 1042, 1059, 1145, 1258, 1393, 1575
TseFI	GTSAC	7 cut(s)	19, 329, 425, 589, 961, 988, 1136
TseI	GCWGC	7 cut(s)	221, 224, 463, 659, 938, 1049, 1229
Tsp45I	GTSAC	7 cut(s)	19, 329, 425, 589, 961, 988, 1136
TspDTI	ATGAA	2 cut(s)	765, 1436
TspGWI	ACGGA	2 cut(s)	7, 1527
TspMI	CCCGGG	1 cut(s)	45
TspRI	CASTG	9 cut(s)	505, 688, 841, 1042, 1059, 1145, 1258, 1393, 1575
Tth111I	GACNNNGTC	2 cut(s)	86, 500
VpaK11BI	GGWCC	2 cut(s)	214, 599
XapI	RAATTY	1 cut(s)	1327
XcmI	CCANNNNNNNNNTGG	2 cut(s)	193, 601
XmaI	CCCGGG	1 cut(s)	45
XmnI	GAANNNNTTC	1 cut(s)	524

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.