Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0009245

Physical Location & Seq

Genomic Coordinates Reverse (-)

23787959 .. 23791369

Gene Structure 3411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000028513

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGACTTCCACTTCCTCCGTCACTCTCTCCCAGGCCCTCCTGGCCAGGGCCATTTCCCACCACGGCTCCAACTCCACCTCCGACCGCGTCTCCCTCTCCTCCGCCCTCTCCCTCCCCACCTTCTCCGGCCTCAAATCCACCTCATCGTCGGCGAGTTCTGCATCATCCAAGGTGTCCCGTGTCCCCAGGCGCCGGTTGGGCGCCGCCAGGCCGGTCCTGGCTGCTGCCGTGGAGACTCTCGACAAGACTACCGAGACCTCGCTGGTGGAGAAGTCTGTGAACACGATCCGGTTCTTGGCGATTGATGCTGTCGAGAAGGCTAACTCGGGTCACCCCGGTCTGCCCATGGGTTGCGCTCCGATGGGTCATATTTTGTATGACGAGATCATGAGGTATAACCCCAAGAATCCTTACTGGTTCAACCGTGACAGGTTCGTGTTGTCTGCTGGACACGGGTGTATGTTGCAGTACGCTCTGCTCCACCTTGCGGGTTACGACAGTGTCAAGGAAGAGGACTTGAAGAGCTTCAGGCAATGGGGAAGCAAGACCCCAGGACATCCCGAGAACTTTGAGACACCTGGTGTTGAAGTCACCACCGGTCCTTTGGGGCAAGGTATTGCAAATGCTGTTGGTCTAGCCCTTGCTGAGAAGCACTTGGCTGCACGTTACAACAAGCCAGACAGTGAGATTGTTGACCACTACACATATTGTATATTGGGTGATGGTTGTCAGATGGAGGGTATTTCTAATGAAGTTGCTTCCCTTGCTGGGCATTGGGGACTTGGAAAGCTGATAGCCTTCTATGACGACAACCACATTTCCATTGATGGAGACACTGAGATTGCATTCACTGAGAGTGTTGATACCCGTTTTGAGGGTCTCGGGTGGCACATTATCTGGGTGAAGAATGGAAATACCGGGTATGATGAGATTAGAGCTGCCATTAAGGAAGCAAAGGCTGTGACAGACAAGCCCACTTTGATAAAGGTGACAACAACCATTGGTTTTGGATCTCCAAACAAGGCAAACTCATACAGTGTCCATGGTGCTGCACTGGGTGCCAAGGAAGTTGATGCTACCAGACAGAACCTTGGATGGCCATATGAGCCTTTCCACGTGCCAGAGGATGTTAAAAGTCACTGGAGTCGCCATACCGCAGAAGGTTCAGCCCTTGAAGCTGAATGGAATGCCAAGTTTGCTGAATATGAGAAGAAGTACGCAGAGGAAGCTGCAGAGCTGAAGTCCATCATCACTGGTGAGCTACCGGCTGGTTGGGAAAAGGCTCTCCCGACTTACACTCCAGAAGTCCCAGCAGATGCTACCAGGAATTTATCTCAGGCAAACCTCAATGCCCTTGCAAAAGTTCTTCCCGGTCTAGTTGGTGGCAGTGCAGATCTTGCTTCTTCCAACATGACTTTGATGAAAATGTTTGGAGATTTCCAGAAGGGTACCCCAGAAGAACGCAATATTAGGTTTGGTGTTAGGGAGCATGGGATGGGAGCCATCTGCAACGGAATTGCTCTTCACAGCCCCGGATTTATTCCGTACTGTGCCACTTTCTTTGTTTTCACTGACTACATGAGAGCTGCCATTAGGATCTCTGCATTGGCAGAAGCCCGAGTTATCTATGTTATGACCCACGATTCAATTGGACTTGGAGAAGATGGACCAACCCATCAACCGATTGAGCACTTGGCAAGTTTCCGGGCAATGCCTAACATTTTGATGCTCCGCCCAGCTGATGGGAATGAGACTGCCGGGTCATACAAGGTTGCAGTTGATAACAAGAAGAGACCATCTATCCTTGCCCTCTCTAGGCAAAAGCTGCCAAACCTTGCTGGAACTTCCATCGAGGGAGTCGAGAAGGGTGGCTATATTGTATCAGACAACTCTACAGGTAACAAGCCTGATGTTATTTTGATTGGTACTGGTTCTGAGTTGGAAATTGCCTACAAAGCTGGTGAGGAACTCAGAAAGGAAGGGAAGGCTGTCAGAGTGGTCTCCTTCGTTTCTTGGGAACTCTTTGACGAACAATCAGATGCCTACAAGGAAAGTGTTTTGCCCGTGGCAGTAACTGCCAGGGTTAGCATTGAGGCTGGATCCACATTTGGGTGGGAGAAGATTATTGGAAGCAAAGGAAAGGCAATCGGAATTGACCGTTTTGGAGCAAGTGCACCAGCCCCAATAATATACAAGGAGTATGGCCTTACTGTCGAGGCCGTTGTTGCAGCAGCAAAAGAAGTTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004802 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016740 GO:0016744 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00030 ko00710 ko01051 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00710 map01051 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C Transketolase_N

Protein Analysis

750

Amino Acids

80.67

Weight (kDa)

6.0

Isoelectric Point (pI)

34.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Transketolase_N	PF00456	91 - 422	4.7e-153	Transketolase, thiamine diphosphate binding domain
Transket_pyr	PF02779	440 - 610	2.4e-53	Transketolase, pyrimidine binding domain
Transketolase_C_1	PF22613	623 - 737	6.9e-40	Transketolase-like TK C-terminal domain
Transketolase_C	PF02780	635 - 741	8.4e-10	Transketolase, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45290 AT2G45290 AT3G60750 AT3G60750
fragaria_vesca	FvH4_7g11510 FvH4_7g11510 FvH4_7g11510 FvH4_7g11510
malus_domestica	MD02G1207200.v1.1 MD07G1119500.v1.1
prunus_persica	Prupe.2G143600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0349951
rosa_laevigata	RLG00000028513
rosa_multiflora	Rmu_co8514097.1_g000001 Rmu_sc0000778.1_g000002 Rmu_sc0005220.1_g000014
rosa_roxburghii	Rroxscaffold_4G00305250
rosa_rugosa	Rorug01G0207300
rosa_samantha	Rh1BG191100 Rh1CG208600 Rh1DG219700
rosa_wichuraiana	Rw0G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1759
Acc65I	GGTACC	1 cut(s)	1448
AccB1I	GGYRCC	4 cut(s)	189, 200, 1058, 1448
AccB7I	CCANNNNNTGG	1 cut(s)	1742
AccII	CGCG	1 cut(s)	87
AciI	CCGC	6 cut(s)	85, 102, 204, 488, 1155, 1732
AclWI	GGATC	5 cut(s)	280, 1018, 1604, 2094, 2107
AcoI	YGGCCR	2 cut(s)	42, 1097
AcsI	RAATTY	1 cut(s)	1327
AcuI	CTGAAG	2 cut(s)	511, 1259
AcvI	CACGTG	1 cut(s)	1117
AcyI	GRCGYC	2 cut(s)	190, 201
AdeI	CACNNNGTG	2 cut(s)	581, 1058
AfaI	GTAC	5 cut(s)	470, 1217, 1450, 1547, 1927
AfiI	CCNNNNNNNGG	9 cut(s)	46, 192, 295, 487, 768, 874, 1742, 1815, 2109
AgeI	ACCGGT	1 cut(s)	596
AgsI	TTSAA	5 cut(s)	421, 520, 587, 1175, 1647
Alw21I	GWGCWC	2 cut(s)	1692, 2176
Alw26I	GTCTC	9 cut(s)	94, 227, 248, 566, 825, 884, 1745, 1786, 2005
Alw44I	GTGCAC	1 cut(s)	2172
AlwI	GGATC	5 cut(s)	280, 1018, 1604, 2094, 2107
AlwNI	CAGNNNCTG	1 cut(s)	2075
Ama87I	CYCGRG	4 cut(s)	325, 560, 881, 1617
AoxI	GGCC	8 cut(s)	33, 42, 48, 127, 209, 1097, 2203, 2217
ApaLI	GTGCAC	1 cut(s)	2172
ApoI	RAATTY	1 cut(s)	1327
AsiGI	ACCGGT	1 cut(s)	596
Asp700I	GAANNNNTTC	1 cut(s)	524
Asp718I	GGTACC	1 cut(s)	1448
AspLEI	GCGC	3 cut(s)	192, 203, 356
AspS9I	GGNCC	5 cut(s)	34, 48, 214, 599, 1667
AsuC2I	CCSGG	6 cut(s)	336, 919, 1371, 1533, 1706, 1759
AsuHPI	GGTGA	7 cut(s)	323, 583, 731, 913, 1000, 1268, 1973
AvaI	CYCGRG	4 cut(s)	325, 560, 881, 1617
AvaII	GGWCC	3 cut(s)	214, 599, 1667
BaeGI	GKGCMC	1 cut(s)	2176
BalI	TGGCCA	2 cut(s)	44, 1099
BamHI	GGATCC	1 cut(s)	2099
BanI	GGYRCC	4 cut(s)	189, 200, 1058, 1448
BbrPI	CACGTG	1 cut(s)	1117
Bbv12I	GWGCWC	2 cut(s)	1692, 2176
BceAI	ACGGC	3 cut(s)	79, 212, 2204
BcnI	CCSGG	6 cut(s)	336, 919, 1371, 1533, 1706, 1759
BcoDI	GTCTC	9 cut(s)	94, 227, 248, 566, 825, 884, 1745, 1786, 2005
BfaI	CTAG	4 cut(s)	635, 1376, 1815, 2248
BfmI	CTRYAG	2 cut(s)	1230, 1893
BfoI	RGCGCY	2 cut(s)	193, 204
BglI	GCCNNNNNGGC	2 cut(s)	41, 198
BglII	AGATCT	1 cut(s)	1393
Bme18I	GGWCC	3 cut(s)	214, 599, 1667
BmeT110I	CYCGRG	4 cut(s)	325, 560, 881, 1617
BmgT120I	GGNCC	5 cut(s)	34, 48, 214, 599, 1667
BmiI	GGNNCC	7 cut(s)	67, 191, 202, 1060, 1450, 1501, 2101
BmrI	ACTGGG	1 cut(s)	1064
BmsI	GCATC	6 cut(s)	170, 295, 1063, 1306, 1716, 2029
BmuI	ACTGGG	1 cut(s)	1064
BpmI	CTGGAG	2 cut(s)	1162, 1284
BpuMI	CCSGG	6 cut(s)	336, 919, 1371, 1533, 1706, 1759
BsaAI	YACGTR	1 cut(s)	1117
BsaHI	GRCGYC	2 cut(s)	190, 201
BsaI	GGTCTC	4 cut(s)	248, 884, 1786, 2005
BsaWI	WCCGGW	2 cut(s)	288, 596
BsaXI	ACNNNNNCTCC	8 cut(s)	50, 62, 74, 80, 92, 104, 1282, 1312
Bsc4I	CCNNNNNNNGG	9 cut(s)	46, 192, 295, 487, 768, 874, 1742, 1815, 2109
Bse118I	RCCGGY	4 cut(s)	192, 211, 596, 1264
Bse1I	ACTGG	5 cut(s)	419, 1059, 1145, 1258, 1933
Bse3DI	GCAATG	2 cut(s)	539, 1716
BseGI	GGATG	5 cut(s)	164, 556, 1100, 1132, 1500
BseLI	CCNNNNNNNGG	9 cut(s)	46, 192, 295, 487, 768, 874, 1742, 1815, 2109
BseMI	GCAATG	2 cut(s)	539, 1716
BseMII	CTCAG	6 cut(s)	636, 828, 843, 1349, 1926, 1984
BseNI	ACTGG	5 cut(s)	419, 1059, 1145, 1258, 1933
BseRI	GAGGAG	1 cut(s)	88
BseSI	GKGCMC	1 cut(s)	2176
BseYI	CCCAGC	3 cut(s)	767, 1309, 1735
BsgI	GTGCAG	3 cut(s)	645, 1035, 1410
Bsh1236I	CGCG	1 cut(s)	87
Bsh1285I	CGRYCG	1 cut(s)	85
BshFI	GGCC	8 cut(s)	35, 44, 50, 129, 211, 1099, 2205, 2219
BshNI	GGYRCC	4 cut(s)	189, 200, 1058, 1448
BshTI	ACCGGT	1 cut(s)	596
BsiEI	CGRYCG	1 cut(s)	85
BsiHKAI	GWGCWC	2 cut(s)	1692, 2176
BsiHKCI	CYCGRG	4 cut(s)	325, 560, 881, 1617
BslFI	GGGAC	4 cut(s)	160, 167, 792, 1292
BslI	CCNNNNNNNGG	9 cut(s)	46, 192, 295, 487, 768, 874, 1742, 1815, 2109
BsmAI	GTCTC	9 cut(s)	94, 227, 248, 566, 825, 884, 1745, 1786, 2005
BsmBI	CGTCTC	1 cut(s)	94
BsmFI	GGGAC	4 cut(s)	160, 167, 792, 1292
BsmI	GAATGC	2 cut(s)	845, 1192
BsnI	GGCC	8 cut(s)	35, 44, 50, 129, 211, 1099, 2205, 2219
Bso31I	GGTCTC	4 cut(s)	248, 884, 1786, 2005
BsoBI	CYCGRG	4 cut(s)	325, 560, 881, 1617
Bsp1286I	GDGCHC	2 cut(s)	1692, 2176
Bsp143I	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
Bsp19I	CCATGG	2 cut(s)	345, 1042
BspACI	CCGC	6 cut(s)	85, 102, 204, 488, 1155, 1732
BspANI	GGCC	8 cut(s)	35, 44, 50, 129, 211, 1099, 2205, 2219
BspCNI	CTCAG	6 cut(s)	637, 829, 844, 1348, 1927, 1983
BspFNI	CGCG	1 cut(s)	87
BspHI	TCATGA	1 cut(s)	387
BspLI	GGNNCC	7 cut(s)	67, 191, 202, 1060, 1450, 1501, 2101
BspMAI	CTGCAG	1 cut(s)	1234
BspPI	GGATC	5 cut(s)	280, 1018, 1604, 2094, 2107
BspQI	GCTCTTC	2 cut(s)	515, 1527
BspT107I	GGYRCC	4 cut(s)	189, 200, 1058, 1448
BspTNI	GGTCTC	4 cut(s)	248, 884, 1786, 2005
BsrDI	GCAATG	2 cut(s)	539, 1716
BsrFI	RCCGGY	4 cut(s)	192, 211, 596, 1264
BsrI	ACTGG	5 cut(s)	419, 1059, 1145, 1258, 1933
BssAI	RCCGGY	4 cut(s)	192, 211, 596, 1264
BssMI	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
BssNI	GRCGYC	2 cut(s)	190, 201
BssT1I	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
Bst4CI	ACNGT	7 cut(s)	425, 500, 683, 1037, 1550, 2159, 2212
Bst6I	CTCTTC	4 cut(s)	504, 515, 1527, 1784
BstACI	GRCGYC	2 cut(s)	190, 201
BstAPI	GCANNNNNTGC	4 cut(s)	1058, 1397, 1825, 2075
BstBAI	YACGTR	1 cut(s)	1117
BstDEI	CTNAG	6 cut(s)	645, 837, 852, 1335, 1935, 1970
BstDSI	CCRYGG	5 cut(s)	61, 228, 345, 1042, 2064
BstEII	GGTNACC	1 cut(s)	329
BstF5I	GGATG	5 cut(s)	164, 556, 1100, 1132, 1500
BstFNI	CGCG	1 cut(s)	87
BstH2I	RGCGCY	2 cut(s)	193, 204
BstHHI	GCGC	3 cut(s)	192, 203, 356
BstKTI	GATC	6 cut(s)	288, 387, 1013, 1396, 1599, 2102
BstMAI	GTCTC	9 cut(s)	94, 227, 248, 566, 825, 884, 1745, 1786, 2005
BstMBI	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
BstMCI	CGRYCG	1 cut(s)	85
BstPI	GGTNACC	1 cut(s)	329
BstSFI	CTRYAG	2 cut(s)	1230, 1893
BstSLI	GKGCMC	1 cut(s)	2176
BstUI	CGCG	1 cut(s)	87
BstX2I	RGATCY	4 cut(s)	1010, 1393, 1596, 2099
BstYI	RGATCY	4 cut(s)	1010, 1393, 1596, 2099
BsuRI	GGCC	8 cut(s)	35, 44, 50, 129, 211, 1099, 2205, 2219
BtgI	CCRYGG	5 cut(s)	61, 228, 345, 1042, 2064
BtsCI	GGATG	5 cut(s)	164, 556, 1100, 1132, 1500
BtsI	GCAGTG	1 cut(s)	1393
CaiI	CAGNNNCTG	1 cut(s)	2075
CciI	TCATGA	1 cut(s)	387
CfoI	GCGC	3 cut(s)	192, 203, 356
Cfr10I	RCCGGY	4 cut(s)	192, 211, 596, 1264
Cfr13I	GGNCC	5 cut(s)	34, 48, 214, 599, 1667
CseI	GACGC	1 cut(s)	76
CsiI	ACCWGGT	1 cut(s)	577
Csp6I	GTAC	5 cut(s)	469, 1216, 1449, 1546, 1926
CspAI	ACCGGT	1 cut(s)	596
CspCI	CAANNNNNGTGG	2 cut(s)	1543, 1578
CviAII	CATG	6 cut(s)	346, 388, 1043, 1411, 1490, 1579
CviQI	GTAC	5 cut(s)	469, 1216, 1449, 1546, 1926
DdeI	CTNAG	6 cut(s)	645, 837, 852, 1335, 1935, 1970
DinI	GGCGCC	2 cut(s)	191, 202
DpnI	GATC	6 cut(s)	287, 386, 1012, 1395, 1598, 2101
DpnII	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
DraIII	CACNNNGTG	2 cut(s)	581, 1058
DrdI	GACNNNNNNGTC	1 cut(s)	1759
DseDI	GACNNNNNNGTC	1 cut(s)	1759
EaeI	YGGCCR	2 cut(s)	42, 1097
Eam1104I	CTCTTC	4 cut(s)	504, 515, 1527, 1784
EarI	CTCTTC	4 cut(s)	504, 515, 1527, 1784
EciI	GGCGGA	2 cut(s)	91, 1721
Eco130I	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
Eco31I	GGTCTC	4 cut(s)	248, 884, 1786, 2005
Eco47I	GGWCC	3 cut(s)	214, 599, 1667
Eco57I	CTGAAG	2 cut(s)	511, 1259
Eco72I	CACGTG	1 cut(s)	1117
Eco88I	CYCGRG	4 cut(s)	325, 560, 881, 1617
Eco91I	GGTNACC	1 cut(s)	329
EcoO109I	RGGNCCY	1 cut(s)	34
EcoO65I	GGTNACC	1 cut(s)	329
EcoT14I	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
EgeI	GGCGCC	2 cut(s)	191, 202
EheI	GGCGCC	2 cut(s)	191, 202
ErhI	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
Esp3I	CGTCTC	1 cut(s)	94
FaeI	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1582
FaqI	GGGAC	4 cut(s)	160, 167, 792, 1292
FatI	CATG	6 cut(s)	345, 387, 1042, 1410, 1489, 1578
FauI	CCCGC	1 cut(s)	481
FauNDI	CATATG	1 cut(s)	1102
FokI	GGATG	5 cut(s)	151, 543, 1107, 1139, 1507
FspBI	CTAG	4 cut(s)	635, 1376, 1815, 2248
GlaI	GCGC	3 cut(s)	191, 202, 355
GsaI	CCCAGC	3 cut(s)	771, 1313, 1739
GsuI	CTGGAG	2 cut(s)	1162, 1284
HaeII	RGCGCY	2 cut(s)	193, 204
HaeIII	GGCC	8 cut(s)	35, 44, 50, 129, 211, 1099, 2205, 2219
HgaI	GACGC	1 cut(s)	76
HhaI	GCGC	3 cut(s)	192, 203, 356
Hin1I	GRCGYC	2 cut(s)	190, 201
Hin1II	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1582
Hin6I	GCGC	3 cut(s)	190, 201, 354
HinP1I	GCGC	3 cut(s)	190, 201, 354
HincII	GTYRAC	1 cut(s)	694
HindII	GTYRAC	1 cut(s)	694
HinfI	GANTC	5 cut(s)	235, 406, 1144, 1643, 1857
HphI	GGTGA	7 cut(s)	323, 583, 731, 913, 1000, 1268, 1973
Hpy166II	GTNNAC	3 cut(s)	280, 694, 2174
Hpy188I	TCNGA	9 cut(s)	82, 360, 732, 1885, 1936, 1973, 1994, 2038, 2150
Hpy188III	TCNNGA	8 cut(s)	239, 313, 388, 560, 1288, 1301, 1441, 1861
Hpy8I	GTNNAC	3 cut(s)	280, 694, 2174
Hpy99I	CGWCG	1 cut(s)	151
HpyAV	CCTTC	9 cut(s)	130, 310, 808, 1154, 1438, 1858, 1973, 1978, 2014
HpyCH4III	ACNGT	7 cut(s)	425, 500, 683, 1037, 1550, 2159, 2212
HpyCH4IV	ACGT	2 cut(s)	664, 1116
HpyF3I	CTNAG	6 cut(s)	645, 837, 852, 1335, 1935, 1970
HpySE526I	ACGT	2 cut(s)	664, 1116
Hsp92I	GRCGYC	2 cut(s)	190, 201
Hsp92II	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1582
HspAI	GCGC	3 cut(s)	190, 201, 354
KasI	GGCGCC	2 cut(s)	189, 200
KpnI	GGTACC	1 cut(s)	1452
Kzo9I	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
LguI	GCTCTTC	2 cut(s)	515, 1527
LmnI	GCTCC	7 cut(s)	71, 361, 483, 1486, 1499, 1734, 2165
LweI	GCATC	6 cut(s)	170, 295, 1063, 1306, 1716, 2029
MabI	ACCWGGT	1 cut(s)	577
MaeI	CTAG	4 cut(s)	635, 1376, 1815, 2248
MaeII	ACGT	2 cut(s)	664, 1116
MalI	GATC	6 cut(s)	287, 386, 1012, 1395, 1598, 2101
MboI	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
MfeI	CAATTG	1 cut(s)	1647
MflI	RGATCY	4 cut(s)	1010, 1393, 1596, 2099
MhlI	GDGCHC	2 cut(s)	1692, 2176
MlsI	TGGCCA	2 cut(s)	44, 1099
MluCI	AATT	5 cut(s)	1327, 1515, 1647, 1944, 2151
MluNI	TGGCCA	2 cut(s)	44, 1099
Mly113I	GGCGCC	2 cut(s)	190, 201
MlyI	GAGTC	3 cut(s)	229, 1153, 1866
MmeI	TCCRAC	4 cut(s)	93, 105, 1431, 1920
Mox20I	TGGCCA	2 cut(s)	44, 1099
MroXI	GAANNNNTTC	1 cut(s)	524
MscI	TGGCCA	2 cut(s)	44, 1099
MseI	TTAA	2 cut(s)	945, 1131
MslI	CAYNNNNRTG	2 cut(s)	1724, 2110
Msp20I	TGGCCA	2 cut(s)	44, 1099
MspA1I	CMGCKG	1 cut(s)	1739
MunI	CAATTG	1 cut(s)	1647
Mva1269I	GAATGC	2 cut(s)	845, 1192
MvnI	CGCG	1 cut(s)	87
NarI	GGCGCC	2 cut(s)	190, 201
NciI	CCSGG	6 cut(s)	336, 919, 1371, 1533, 1706, 1759
NcoI	CCATGG	2 cut(s)	345, 1042
NdeI	CATATG	1 cut(s)	1102
NdeII	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
NlaIII	CATG	6 cut(s)	349, 391, 1046, 1414, 1493, 1582
NlaIV	GGNNCC	7 cut(s)	67, 191, 202, 1060, 1450, 1501, 2101
NmuCI	GTSAC	7 cut(s)	19, 329, 425, 589, 961, 988, 1136
PagI	TCATGA	1 cut(s)	387
PciSI	GCTCTTC	2 cut(s)	515, 1527
PcsI	WCGNNNNNNNCGW	1 cut(s)	1857
PctI	GAATGC	2 cut(s)	845, 1192
PdmI	GAANNNNTTC	1 cut(s)	524
PfeI	GAWTC	2 cut(s)	406, 1643
PflFI	GACNNNGTC	2 cut(s)	86, 500
PflMI	CCANNNNNTGG	1 cut(s)	1742
PinAI	ACCGGT	1 cut(s)	596
PleI	GAGTC	3 cut(s)	229, 1152, 1865
PluTI	GGCGCC	2 cut(s)	193, 204
PmaCI	CACGTG	1 cut(s)	1117
PmlI	CACGTG	1 cut(s)	1117
PpsI	GAGTC	3 cut(s)	229, 1152, 1865
Ppu21I	YACGTR	1 cut(s)	1117
PspCI	CACGTG	1 cut(s)	1117
PspEI	GGTNACC	1 cut(s)	329
PspFI	CCCAGC	3 cut(s)	767, 1309, 1735
PspN4I	GGNNCC	7 cut(s)	67, 191, 202, 1060, 1450, 1501, 2101
PspPI	GGNCC	5 cut(s)	34, 48, 214, 599, 1667
PstI	CTGCAG	1 cut(s)	1234
PstNI	CAGNNNCTG	1 cut(s)	2075
PsuI	RGATCY	4 cut(s)	1010, 1393, 1596, 2099
PsyI	GACNNNGTC	2 cut(s)	86, 500
PvuII	CAGCTG	1 cut(s)	1739
RsaI	GTAC	5 cut(s)	470, 1217, 1450, 1547, 1927
RsaNI	GTAC	5 cut(s)	469, 1216, 1449, 1546, 1926
RseI	CAYNNNNRTG	2 cut(s)	1724, 2110
SapI	GCTCTTC	2 cut(s)	515, 1527
SaqAI	TTAA	2 cut(s)	945, 1131
Sau3AI	GATC	6 cut(s)	285, 384, 1010, 1393, 1596, 2099
Sau96I	GGNCC	5 cut(s)	34, 48, 214, 599, 1667
SchI	GAGTC	3 cut(s)	229, 1153, 1866
SduI	GDGCHC	2 cut(s)	1692, 2176
SexAI	ACCWGGT	1 cut(s)	577
SfaNI	GCATC	6 cut(s)	170, 295, 1063, 1306, 1716, 2029
SfcI	CTRYAG	2 cut(s)	1230, 1893
SfiI	GGCCNNNNNGGCC	1 cut(s)	41
SfoI	GGCGCC	2 cut(s)	191, 202
SinI	GGWCC	3 cut(s)	214, 599, 1667
SmiMI	CAYNNNNRTG	2 cut(s)	1724, 2110
Sse9I	AATT	5 cut(s)	1327, 1515, 1647, 1944, 2151
SsiI	CCGC	6 cut(s)	85, 102, 204, 488, 1155, 1732
SspDI	GGCGCC	2 cut(s)	189, 200
SspI	AATATT	1 cut(s)	1468
SspMI	CTAG	4 cut(s)	635, 1376, 1815, 2248
StyI	CCWWGG	5 cut(s)	168, 345, 1042, 1062, 1090
TaaI	ACNGT	7 cut(s)	425, 500, 683, 1037, 1550, 2159, 2212
TaiI	ACGT	2 cut(s)	667, 1119
TaqI	TCGA	5 cut(s)	240, 312, 1851, 1860, 2214
TasI	AATT	5 cut(s)	1327, 1515, 1647, 1944, 2151
TauI	GCSGC	1 cut(s)	206
TfiI	GAWTC	2 cut(s)	406, 1643
Tru1I	TTAA	2 cut(s)	945, 1131
Tru9I	TTAA	2 cut(s)	945, 1131
TseFI	GTSAC	7 cut(s)	19, 329, 425, 589, 961, 988, 1136
Tsp45I	GTSAC	7 cut(s)	19, 329, 425, 589, 961, 988, 1136
TspDTI	ATGAA	2 cut(s)	765, 1436
TspGWI	ACGGA	3 cut(s)	7, 1527, 1533
Tth111I	GACNNNGTC	2 cut(s)	86, 500
Van91I	CCANNNNNTGG	1 cut(s)	1742
VneI	GTGCAC	1 cut(s)	2172
VpaK11BI	GGWCC	3 cut(s)	214, 599, 1667
XapI	RAATTY	1 cut(s)	1327
XcmI	CCANNNNNNNNNTGG	4 cut(s)	193, 214, 601, 1646
XmnI	GAANNNNTTC	1 cut(s)	524
XspI	CTAG	4 cut(s)	635, 1376, 1815, 2248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.