Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009245

Physical Location & Seq

Genomic Coordinates Forward (+)

20077870 .. 20082136

Gene Structure 4267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G143600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2259 bp

ATGACCTCGTCTACATCTGTGACTCTGTCTCAAGCCCTTTTGGCTCGCGCCATTTCTCACCATGGCTCGAGCTCAACCTCAGACCGGGTCTCTCTCTCTGCAGCCCTCACTCTACCAACTTTCTCCGGTCTCAAATCCACTTCATCGTCGCCATCATCGTCGTCTTCGACGTCATCCAAGCTCTCTCGGTTCCAGCGCCGCCGTCTAGGCGCGAACAGGCCGGTCCGGGCCGCCGCCGTCGAGACTCTGGACAAGACCACAGAGACCTCTTTGGTCGAGAAGTCGGTCAACACGATCCGATTCTTGGCCATTGATGCTGTAGAGAAGGCCAATTCGGGTCACCCCGGTTTGCCAATGGGCTGTGCTCCAATGGGTCATATTTTGTACGATGAGATCATGAGGTACAACCCCAAGAACCCGTACTGGTTCAACCGTGACCGGTTCGTGTTGTCTGCTGGACACGGGTGTATGTTGCAATACGCTTTGCTTCACCTTGCTGGATATGACAGTGTCAAGGAAGAAGACTTGAAAGGCTTCCGTCAATGGGGAAGCAAGACCCCTGGACATCCTGAGAACTTTGAGACACCTGGTGTTGAAGTCACAACTGGTCCTTTGGGGCAAGGCATTGCAAATGCTGTTGGTTTGGCCCTTGCTGAGAAGCACTTGGCTGCACGTTACAACAAGCCAGACAGTGAGATCGTTGACCACTACACATATGTTATATTGGGTGATGGTTGTCAAATGGAGGGTATTTCAAACGAAGCTGCTTCTCTTGCGGGGCATTGGGGACTTGGGAAGCTGATAGCCTTCTATGATGATAACCACATTTCCATTGATGGAGACACTGAGATTGCATTCACTGAGAGTGTTGATACCCGTTTTGAGGGTCTTGGGTGGCACGTTATCTGGGTGAAGAATGGAAACACCGGGTATGATGAGATTCGAGCTGCCATCAAGGAAGCAAAGGCTGTCACAGATAGACCCACTTTGATAAAGGTGACAACAACCATTGGTTTTGGATCTCCAAACAAAGCAAACTCGTACAGTGTTCATGGTGCTGCATTGGGTGCCAAGGAAGTGGATGCTACCCGGAAGAACCTTGGATGGCCATATGAGCCTTTCCATGTACCAGAGGATGTTAAAAGTCATTGGAGTCGCCATACCGCTGAGGGTTCTGCTCTTGAAGCTGAATGGAATGCCAAGTTTGCTGAATATGAGAAGAAGTACAAGGAGGAAGCTGCAGAGCTGAAATCCATCATTTCGGGTGAGCTACCAGCTGGTTGGGAAAAAGCACTTCCGACTTACACTCCAGAGAACCCAGCTGATGCTACCCGAAATTTATCTCAAGCAAACCTAAATGCCCTTGCGAAGGTTCTCCCTGGTCTTCTTGGTGGAAGTGCAGACCTTGCTTCTTCCAACATGACTTTGCTAAAAAGTTTTGGAGACTTCCAGAAGAACACCCCGGAAGAACGCAATGTTAGGTTTGGTGTTAGGGAGCATGGGATGGGAGCCATCTGCAATGGGATTGCCCTTCACAGCCCAGGCCTCATTCCATACTGTGCCACTTTCTTTGTTTTCACGGACTACATGAGAGCTGCCATAAGGATCTCTGCCTTGTCAGAGGCTGGAGTTATCTATGTTATGACCCATGATTCAATTGGGCTTGGAGAAGATGGACCAACCCATCAACCAATAGAGCACTTGGCAAGTTTCCGGGCAATGCCCAACATTTTGATGCTCCGCCCAGCTGATGGGAATGAGACTGCTGGGGCATACAGGGTTGCAGTCCTTAACAGGAAGAGGCCATCTATCCTAGCCCTCTCTCGCCAAAAGCTGCCCAATCTTCCTGGGACTTCCATTGAGGGAGTCGAGAAGGGTGGTTACATTATATCAGACAACTCTTCAGGTAACAAGCCAGATGTCATTTTGATTGCAACTGGCTCCGAGTTGGAAATTGTTTTCAAAGCTGGTGAGGAACTCAGAAAAGAAGGGAAGGCTGTTAGAGTTGTCTCCTTTGTTTCTTGGGAACTCTTTGATGGCCAATCAGATGCCTACAAGGAAAGTGTTTTGCCGGCTGCAGTAACAGCAAGAGTTAGCATTGAAGCTGGATCAACATTTGGGTGGCAAAAGCTTGTTGGAAGCAAAGGAAAGGCTATTGGAATTGATCATTTTGGGGCAAGTGCACCAGCTGGAAAAATATACAAGGAGTTTGGCCTTACCGTCGAGGCAGTTATTGCAGCAGCAAAAGAAGTTAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004802 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0016020 GO:0016740 GO:0016744 GO:0031976 GO:0031984 GO:0034357 GO:0042651 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035

KEGG Pathways

Metabolic & Signaling

ko00030 ko00710 ko01051 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 map00030 map00710 map01051 map01100 map01110 map01120 map01130 map01200 map01230

Pfam Domains

Protein Families

Transket_pyr Transketolase_C Transketolase_N

Protein Analysis

753

Amino Acids

80.96

Weight (kDa)

6.36

Isoelectric Point (pI)

33.98

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009245)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45290 AT2G45290 AT3G60750 AT3G60750
fragaria_vesca	FvH4_7g11510 FvH4_7g11510 FvH4_7g11510 FvH4_7g11510
malus_domestica	MD02G1207200.v1.1 MD07G1119500.v1.1
prunus_persica	Prupe.2G143600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0349951
rosa_laevigata	RLG00000028513
rosa_multiflora	Rmu_co8514097.1_g000001 Rmu_sc0000778.1_g000002 Rmu_sc0005220.1_g000014
rosa_roxburghii	Rroxscaffold_4G00305250
rosa_rugosa	Rorug01G0207300
rosa_samantha	Rh1BG191100 Rh1CG208600 Rh1DG219700
rosa_wichuraiana	Rw0G007600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	173
AccB1I	GGYRCC	1 cut(s)	1067
AccB7I	CCANNNNNTGG	1 cut(s)	1751
AccI	GTMKAC	1 cut(s)	11
AccII	CGCG	2 cut(s)	48, 212
AciI	CCGC	6 cut(s)	199, 231, 234, 776, 1164, 1741
AclWI	GGATC	4 cut(s)	289, 1027, 1613, 2116
AcoI	YGGCCR	3 cut(s)	306, 1106, 2038
AcsI	RAATTY	1 cut(s)	1336
AcuI	CTGAAG	1 cut(s)	1887
AcyI	GRCGYC	1 cut(s)	170
AdeI	CACNNNGTG	1 cut(s)	590
AfaI	GTAC	6 cut(s)	386, 404, 422, 1043, 1128, 1226
AfiI	CCNNNNNNNGG	6 cut(s)	84, 304, 544, 883, 1369, 1751
AgeI	ACCGGT	1 cut(s)	438
AgsI	TTSAA	8 cut(s)	430, 529, 596, 756, 1184, 1656, 1963, 2102
AjnI	CCWGG	5 cut(s)	559, 586, 1378, 1540, 1846
Alw21I	GWGCWC	4 cut(s)	74, 367, 1701, 2185
Alw44I	GTGCAC	1 cut(s)	2181
AlwI	GGATC	4 cut(s)	289, 1027, 1613, 2116
AlwNI	CAGNNNCTG	1 cut(s)	1625
Ama87I	CYCGRG	1 cut(s)	67
ApaLI	GTGCAC	1 cut(s)	2181
ApoI	RAATTY	1 cut(s)	1336
AsiGI	ACCGGT	1 cut(s)	438
Asp700I	GAANNNNTTC	1 cut(s)	533
AspLEI	GCGC	3 cut(s)	50, 198, 212
AspS9I	GGNCC	5 cut(s)	223, 228, 608, 646, 1676
AsuC2I	CCSGG	7 cut(s)	86, 227, 345, 928, 1090, 1463, 1715
AsuHPI	GGTGA	8 cut(s)	50, 332, 482, 740, 922, 1009, 1277, 1982
AvaI	CYCGRG	1 cut(s)	67
AvaII	GGWCC	3 cut(s)	223, 608, 1676
BaeGI	GKGCMC	1 cut(s)	2185
BalI	TGGCCA	3 cut(s)	308, 1108, 2040
BanI	GGYRCC	1 cut(s)	1067
BanII	GRGCYC	1 cut(s)	74
BarI	GAAGNNNNNNTAC	2 cut(s)	1865, 1897
BbsI	GAAGAC	3 cut(s)	156, 528, 1376
Bbv12I	GWGCWC	4 cut(s)	74, 367, 1701, 2185
BbvCI	CCTCAGC	1 cut(s)	1167
BceAI	ACGGC	2 cut(s)	186, 221
BciT130I	CCWGG	5 cut(s)	561, 588, 1380, 1542, 1848
BclI	TGATCA	1 cut(s)	2164
BcnI	CCSGG	7 cut(s)	86, 227, 345, 928, 1090, 1463, 1715
BfaI	CTAG	3 cut(s)	206, 1814, 2257
BfmI	CTRYAG	4 cut(s)	99, 318, 1239, 2076
BfoI	RGCGCY	1 cut(s)	199
BglI	GCCNNNNNGGC	2 cut(s)	41, 207
Bme18I	GGWCC	3 cut(s)	223, 608, 1676
BmeT110I	CYCGRG	1 cut(s)	67
BmgT120I	GGNCC	5 cut(s)	223, 228, 608, 646, 1676
BmiI	GGNNCC	4 cut(s)	191, 1069, 1510, 1942
BmsI	GCATC	5 cut(s)	304, 1072, 1315, 1725, 2038
BpiI	GAAGAC	3 cut(s)	156, 528, 1376
BpmI	CTGGAG	2 cut(s)	1293, 1647
Bpu10I	CCTNAGC	1 cut(s)	1167
BpuEI	CTTGAG	2 cut(s)	15, 1329
BpuMI	CCSGG	7 cut(s)	86, 227, 345, 928, 1090, 1463, 1715
BsaHI	GRCGYC	1 cut(s)	170
BsaI	GGTCTC	3 cut(s)	94, 134, 257
BsaJI	CCNNGG	9 cut(s)	61, 343, 559, 1071, 1099, 1378, 1461, 1540, 1847
BsaWI	WCCGGW	2 cut(s)	125, 438
BsaXI	ACNNNNNCTCC	2 cut(s)	1291, 1321
Bsc4I	CCNNNNNNNGG	6 cut(s)	84, 304, 544, 883, 1369, 1751
Bse118I	RCCGGY	3 cut(s)	220, 438, 2071
Bse1I	ACTGG	3 cut(s)	428, 610, 1942
Bse3DI	GCAATG	4 cut(s)	624, 1480, 1525, 1725
BseBI	CCWGG	5 cut(s)	561, 588, 1380, 1542, 1848
BseDI	CCNNGG	9 cut(s)	61, 343, 559, 1071, 1099, 1378, 1461, 1540, 1847
BseGI	GGATG	6 cut(s)	173, 565, 1087, 1109, 1141, 1509
BseLI	CCNNNNNNNGG	6 cut(s)	84, 304, 544, 883, 1369, 1751
BseMI	GCAATG	4 cut(s)	624, 1480, 1525, 1725
BseMII	CTCAG	7 cut(s)	93, 561, 645, 837, 852, 1158, 1993
BseNI	ACTGG	3 cut(s)	428, 610, 1942
BseSI	GKGCMC	1 cut(s)	2185
BseYI	CCCAGC	3 cut(s)	1318, 1744, 1766
BsgI	GTGCAG	2 cut(s)	654, 1419
Bsh1236I	CGCG	2 cut(s)	48, 212
BshNI	GGYRCC	1 cut(s)	1067
BshTI	ACCGGT	1 cut(s)	438
BsiHKAI	GWGCWC	4 cut(s)	74, 367, 1701, 2185
BsiHKCI	CYCGRG	1 cut(s)	67
BslFI	GGGAC	2 cut(s)	801, 1864
BslI	CCNNNNNNNGG	6 cut(s)	84, 304, 544, 883, 1369, 1751
BsmFI	GGGAC	2 cut(s)	801, 1864
BsmI	GAATGC	2 cut(s)	854, 1201
Bso31I	GGTCTC	3 cut(s)	94, 134, 257
BsoBI	CYCGRG	1 cut(s)	67
Bsp1286I	GDGCHC	4 cut(s)	74, 367, 1701, 2185
Bsp143I	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
Bsp19I	CCATGG	1 cut(s)	61
BspACI	CCGC	6 cut(s)	199, 231, 234, 776, 1164, 1741
BspCNI	CTCAG	7 cut(s)	92, 562, 646, 838, 853, 1159, 1992
BspFNI	CGCG	2 cut(s)	48, 212
BspHI	TCATGA	1 cut(s)	396
BspLI	GGNNCC	4 cut(s)	191, 1069, 1510, 1942
BspMAI	CTGCAG	3 cut(s)	103, 1243, 2080
BspPI	GGATC	4 cut(s)	289, 1027, 1613, 2116
BspT107I	GGYRCC	1 cut(s)	1067
BspTNI	GGTCTC	3 cut(s)	94, 134, 257
BsrDI	GCAATG	4 cut(s)	624, 1480, 1525, 1725
BsrFI	RCCGGY	3 cut(s)	220, 438, 2071
BsrI	ACTGG	3 cut(s)	428, 610, 1942
BssAI	RCCGGY	3 cut(s)	220, 438, 2071
BssECI	CCNNGG	9 cut(s)	61, 343, 559, 1071, 1099, 1378, 1461, 1540, 1847
BssMI	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
BssNI	GRCGYC	1 cut(s)	170
BssT1I	CCWWGG	3 cut(s)	61, 1071, 1099
Bst2UI	CCWGG	5 cut(s)	561, 588, 1380, 1542, 1848
Bst4CI	ACNGT	6 cut(s)	434, 509, 692, 1046, 1559, 2221
Bst6I	CTCTTC	2 cut(s)	1793, 1906
BstACI	GRCGYC	1 cut(s)	170
BstAPI	GCANNNNNTGC	3 cut(s)	1067, 1406, 2234
BstC8I	GCNNGC	2 cut(s)	46, 2073
BstDEI	CTNAG	7 cut(s)	79, 570, 654, 846, 861, 1167, 1979
BstDSI	CCRYGG	1 cut(s)	61
BstEII	GGTNACC	1 cut(s)	338
BstENI	CCTNNNNNAGG	1 cut(s)	1367
BstF5I	GGATG	6 cut(s)	173, 565, 1087, 1109, 1141, 1509
BstFNI	CGCG	2 cut(s)	48, 212
BstH2I	RGCGCY	1 cut(s)	199
BstHHI	GCGC	3 cut(s)	50, 198, 212
BstKTI	GATC	7 cut(s)	297, 396, 699, 1022, 1608, 2111, 2167
BstMBI	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
BstNI	CCWGG	5 cut(s)	561, 588, 1380, 1542, 1848
BstPI	GGTNACC	1 cut(s)	338
BstSFI	CTRYAG	4 cut(s)	99, 318, 1239, 2076
BstSLI	GKGCMC	1 cut(s)	2185
BstUI	CGCG	2 cut(s)	48, 212
BstV2I	GAAGAC	3 cut(s)	156, 528, 1376
BstX2I	RGATCY	2 cut(s)	1019, 1605
BstXI	CCANNNNNNTGG	2 cut(s)	1078, 1281
BstYI	RGATCY	2 cut(s)	1019, 1605
BtgI	CCRYGG	1 cut(s)	61
BtsCI	GGATG	6 cut(s)	173, 565, 1087, 1109, 1141, 1509
BtsIMutI	CAGTG	5 cut(s)	514, 697, 843, 858, 1051
Cac8I	GCNNGC	2 cut(s)	46, 2073
CaiI	CAGNNNCTG	1 cut(s)	1625
CciI	TCATGA	1 cut(s)	396
CfoI	GCGC	3 cut(s)	50, 198, 212
Cfr10I	RCCGGY	3 cut(s)	220, 438, 2071
Cfr13I	GGNCC	5 cut(s)	223, 228, 608, 646, 1676
CpoI	CGGWCCG	1 cut(s)	223
CsiI	ACCWGGT	1 cut(s)	586
Csp6I	GTAC	6 cut(s)	385, 403, 421, 1042, 1127, 1225
CspAI	ACCGGT	1 cut(s)	438
CspCI	CAANNNNNGTGG	2 cut(s)	1552, 1587
CspI	CGGWCCG	1 cut(s)	223
CviAII	CATG	8 cut(s)	62, 397, 1052, 1124, 1420, 1499, 1588, 1649
CviQI	GTAC	6 cut(s)	385, 403, 421, 1042, 1127, 1225
DdeI	CTNAG	7 cut(s)	79, 570, 654, 846, 861, 1167, 1979
DpnI	GATC	7 cut(s)	296, 395, 698, 1021, 1607, 2110, 2166
DpnII	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
DraIII	CACNNNGTG	1 cut(s)	590
EaeI	YGGCCR	3 cut(s)	306, 1106, 2038
Eam1104I	CTCTTC	2 cut(s)	1793, 1906
EarI	CTCTTC	2 cut(s)	1793, 1906
EciI	GGCGGA	1 cut(s)	1730
Ecl136II	GAGCTC	1 cut(s)	72
Eco130I	CCWWGG	3 cut(s)	61, 1071, 1099
Eco147I	AGGCCT	1 cut(s)	1545
Eco24I	GRGCYC	1 cut(s)	74
Eco31I	GGTCTC	3 cut(s)	94, 134, 257
Eco47I	GGWCC	3 cut(s)	223, 608, 1676
Eco53kI	GAGCTC	1 cut(s)	72
Eco57I	CTGAAG	1 cut(s)	1887
Eco88I	CYCGRG	1 cut(s)	67
Eco91I	GGTNACC	1 cut(s)	338
EcoICRI	GAGCTC	1 cut(s)	72
EcoNI	CCTNNNNNAGG	1 cut(s)	1367
EcoO65I	GGTNACC	1 cut(s)	338
EcoRII	CCWGG	5 cut(s)	559, 586, 1378, 1540, 1846
EcoT14I	CCWWGG	3 cut(s)	61, 1071, 1099
EcoT38I	GRGCYC	1 cut(s)	74
ErhI	CCWWGG	3 cut(s)	61, 1071, 1099
FaeI	CATG	8 cut(s)	65, 400, 1055, 1127, 1423, 1502, 1591, 1652
FaqI	GGGAC	2 cut(s)	801, 1864
FatI	CATG	8 cut(s)	61, 396, 1051, 1123, 1419, 1498, 1587, 1648
FauI	CCCGC	1 cut(s)	769
FauNDI	CATATG	2 cut(s)	715, 1111
FbaI	TGATCA	1 cut(s)	2164
FblI	GTMKAC	1 cut(s)	11
FokI	GGATG	6 cut(s)	160, 552, 1094, 1116, 1148, 1516
FriOI	GRGCYC	1 cut(s)	74
FspBI	CTAG	3 cut(s)	206, 1814, 2257
GlaI	GCGC	3 cut(s)	49, 197, 211
GsaI	CCCAGC	3 cut(s)	1322, 1748, 1770
GsuI	CTGGAG	2 cut(s)	1293, 1647
HaeII	RGCGCY	1 cut(s)	199
HhaI	GCGC	3 cut(s)	50, 198, 212
Hin1I	GRCGYC	1 cut(s)	170
Hin1II	CATG	8 cut(s)	65, 400, 1055, 1127, 1423, 1502, 1591, 1652
Hin6I	GCGC	3 cut(s)	48, 196, 210
HinP1I	GCGC	3 cut(s)	48, 196, 210
HincII	GTYRAC	2 cut(s)	289, 703
HindII	GTYRAC	2 cut(s)	289, 703
HindIII	AAGCTT	1 cut(s)	2129
HinfI	GANTC	7 cut(s)	22, 244, 300, 940, 1153, 1652, 1866
HphI	GGTGA	8 cut(s)	50, 332, 482, 740, 922, 1009, 1277, 1982
Hpy166II	GTNNAC	4 cut(s)	12, 289, 703, 2183
Hpy188I	TCNGA	8 cut(s)	82, 299, 1299, 1621, 1894, 1945, 1982, 2047
Hpy188III	TCNNGA	9 cut(s)	241, 248, 277, 397, 569, 1181, 1310, 1450, 1870
Hpy8I	GTNNAC	4 cut(s)	12, 289, 703, 2183
Hpy99I	CGWCG	5 cut(s)	151, 163, 172, 242, 2225
HpyAV	CCTTC	7 cut(s)	319, 817, 1363, 1541, 1867, 1982, 1987
HpyCH4III	ACNGT	6 cut(s)	434, 509, 692, 1046, 1559, 2221
HpyCH4IV	ACGT	3 cut(s)	170, 673, 900
HpyF3I	CTNAG	7 cut(s)	79, 570, 654, 846, 861, 1167, 1979
HpySE526I	ACGT	3 cut(s)	170, 673, 900
Hsp92I	GRCGYC	1 cut(s)	170
Hsp92II	CATG	8 cut(s)	65, 400, 1055, 1127, 1423, 1502, 1591, 1652
HspAI	GCGC	3 cut(s)	48, 196, 210
KroI	GCCGGC	1 cut(s)	2071
KroNI	GCCGGC	1 cut(s)	2073
Ksp22I	TGATCA	1 cut(s)	2164
Kzo9I	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
LmnI	GCTCC	5 cut(s)	370, 1495, 1508, 1743, 1946
LweI	GCATC	5 cut(s)	304, 1072, 1315, 1725, 2038
MabI	ACCWGGT	1 cut(s)	586
MaeI	CTAG	3 cut(s)	206, 1814, 2257
MaeII	ACGT	3 cut(s)	170, 673, 900
MalI	GATC	7 cut(s)	296, 395, 698, 1021, 1607, 2110, 2166
MboI	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
MfeI	CAATTG	1 cut(s)	1656
MflI	RGATCY	2 cut(s)	1019, 1605
MhlI	GDGCHC	4 cut(s)	74, 367, 1701, 2185
MlsI	TGGCCA	3 cut(s)	308, 1108, 2040
MluCI	AATT	5 cut(s)	331, 1336, 1656, 1953, 2160
MluNI	TGGCCA	3 cut(s)	308, 1108, 2040
MlyI	GAGTC	4 cut(s)	16, 238, 1162, 1875
MmeI	TCCRAC	4 cut(s)	1322, 1440, 1929, 2116
Mox20I	TGGCCA	3 cut(s)	308, 1108, 2040
MroNI	GCCGGC	1 cut(s)	2071
MroXI	GAANNNNTTC	1 cut(s)	533
MscI	TGGCCA	3 cut(s)	308, 1108, 2040
MseI	TTAA	2 cut(s)	1140, 1791
MslI	CAYNNNNRTG	2 cut(s)	1733, 2119
Msp20I	TGGCCA	3 cut(s)	308, 1108, 2040
MspA1I	CMGCKG	5 cut(s)	1166, 1277, 1322, 1748, 2189
MunI	CAATTG	1 cut(s)	1656
Mva1269I	GAATGC	2 cut(s)	854, 1201
MvaI	CCWGG	5 cut(s)	561, 588, 1380, 1542, 1848
MvnI	CGCG	2 cut(s)	48, 212
NaeI	GCCGGC	1 cut(s)	2073
NciI	CCSGG	7 cut(s)	86, 227, 345, 928, 1090, 1463, 1715
NcoI	CCATGG	1 cut(s)	61
NdeI	CATATG	2 cut(s)	715, 1111
NdeII	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
NgoMIV	GCCGGC	1 cut(s)	2071
NlaIII	CATG	8 cut(s)	65, 400, 1055, 1127, 1423, 1502, 1591, 1652
NlaIV	GGNNCC	4 cut(s)	191, 1069, 1510, 1942
NmuCI	GTSAC	6 cut(s)	19, 338, 434, 598, 970, 997
PaeR7I	CTCGAG	1 cut(s)	67
PagI	TCATGA	1 cut(s)	396
PceI	AGGCCT	1 cut(s)	1545
PcsI	WCGNNNNNNNCGW	4 cut(s)	155, 164, 167, 290
PctI	GAATGC	2 cut(s)	854, 1201
PdiI	GCCGGC	1 cut(s)	2073
PdmI	GAANNNNTTC	1 cut(s)	533
PfeI	GAWTC	3 cut(s)	300, 940, 1652
PflFI	GACNNNGTC	4 cut(s)	7, 25, 86, 509
PflMI	CCANNNNNTGG	1 cut(s)	1751
PinAI	ACCGGT	1 cut(s)	438
PleI	GAGTC	4 cut(s)	16, 238, 1161, 1874
PpsI	GAGTC	4 cut(s)	16, 238, 1161, 1874
Psp124BI	GAGCTC	1 cut(s)	74
Psp6I	CCWGG	5 cut(s)	559, 586, 1378, 1540, 1846
PspEI	GGTNACC	1 cut(s)	338
PspFI	CCCAGC	3 cut(s)	1318, 1744, 1766
PspGI	CCWGG	5 cut(s)	559, 586, 1378, 1540, 1846
PspN4I	GGNNCC	4 cut(s)	191, 1069, 1510, 1942
PspPI	GGNCC	5 cut(s)	223, 228, 608, 646, 1676
PspXI	VCTCGAGB	1 cut(s)	67
PstI	CTGCAG	3 cut(s)	103, 1243, 2080
PstNI	CAGNNNCTG	1 cut(s)	1625
PsuI	RGATCY	2 cut(s)	1019, 1605
PsyI	GACNNNGTC	4 cut(s)	7, 25, 86, 509
PvuII	CAGCTG	4 cut(s)	1277, 1322, 1748, 2189
RsaI	GTAC	6 cut(s)	386, 404, 422, 1043, 1128, 1226
RsaNI	GTAC	6 cut(s)	385, 403, 421, 1042, 1127, 1225
RseI	CAYNNNNRTG	2 cut(s)	1733, 2119
Rsr2I	CGGWCCG	1 cut(s)	223
RsrII	CGGWCCG	1 cut(s)	223
SacI	GAGCTC	1 cut(s)	74
SaqAI	TTAA	2 cut(s)	1140, 1791
Sau3AI	GATC	7 cut(s)	294, 393, 696, 1019, 1605, 2108, 2164
Sau96I	GGNCC	5 cut(s)	223, 228, 608, 646, 1676
SchI	GAGTC	4 cut(s)	16, 238, 1162, 1875
SduI	GDGCHC	4 cut(s)	74, 367, 1701, 2185
SexAI	ACCWGGT	1 cut(s)	586
SfaNI	GCATC	5 cut(s)	304, 1072, 1315, 1725, 2038
SfcI	CTRYAG	4 cut(s)	99, 318, 1239, 2076
Sfr274I	CTCGAG	1 cut(s)	67
SinI	GGWCC	3 cut(s)	223, 608, 1676
SlaI	CTCGAG	1 cut(s)	67
SmiMI	CAYNNNNRTG	2 cut(s)	1733, 2119
SmlI	CTYRAG	3 cut(s)	30, 67, 1344
SmoI	CTYRAG	3 cut(s)	30, 67, 1344
Sse9I	AATT	5 cut(s)	331, 1336, 1656, 1953, 2160
SseBI	AGGCCT	1 cut(s)	1545
SsiI	CCGC	6 cut(s)	199, 231, 234, 776, 1164, 1741
SspMI	CTAG	3 cut(s)	206, 1814, 2257
SstI	GAGCTC	1 cut(s)	74
StuI	AGGCCT	1 cut(s)	1545
StyI	CCWWGG	3 cut(s)	61, 1071, 1099
TaaI	ACNGT	6 cut(s)	434, 509, 692, 1046, 1559, 2221
TaiI	ACGT	3 cut(s)	173, 676, 903
TaqI	TCGA	7 cut(s)	68, 167, 240, 276, 943, 1869, 2223
TaqII	GACCGA	1 cut(s)	274
TasI	AATT	5 cut(s)	331, 1336, 1656, 1953, 2160
TatI	WGTACW	1 cut(s)	1224
TauI	GCSGC	3 cut(s)	201, 233, 236
TfiI	GAWTC	3 cut(s)	300, 940, 1652
Tru1I	TTAA	2 cut(s)	1140, 1791
Tru9I	TTAA	2 cut(s)	1140, 1791
TscAI	CASTG	5 cut(s)	514, 697, 850, 865, 1051
TseFI	GTSAC	6 cut(s)	19, 338, 434, 598, 970, 997
Tsp45I	GTSAC	6 cut(s)	19, 338, 434, 598, 970, 997
TspDTI	ATGAA	2 cut(s)	132, 1040
TspGWI	ACGGA	2 cut(s)	527, 1595
TspRI	CASTG	5 cut(s)	514, 697, 850, 865, 1051
Tth111I	GACNNNGTC	4 cut(s)	7, 25, 86, 509
Van91I	CCANNNNNTGG	1 cut(s)	1751
VneI	GTGCAC	1 cut(s)	2181
VpaK11BI	GGWCC	3 cut(s)	223, 608, 1676
XagI	CCTNNNNNAGG	1 cut(s)	1367
XapI	RAATTY	1 cut(s)	1336
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1655
XhoI	CTCGAG	1 cut(s)	67
XmiI	GTMKAC	1 cut(s)	11
XmnI	GAANNNNTTC	1 cut(s)	533
XspI	CTAG	3 cut(s)	206, 1814, 2257
ZraI	GACGTC	1 cut(s)	171

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.