Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0012402

Physical Location & Seq

Genomic Coordinates Forward (+)

34273655 .. 34275613

Gene Structure 1959 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1277400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1959 bp

ATGCAATCGGGAGGCTTCAACGGCGGAGGAGGCGGCGGTGGCGTCCCTGATTTCTACACAAACGGGCGATCCATCTCCATCTCCGCCGCCATGAACGGCCACAACCCGTCTCAGAACAATCCCTACCACCGATCCCAGCTCCCCAGCCTGTTTATGGACCCTACCGCGTCCCAGATCGCTCGCCAAACACAATTTCAACCCCAAACCCAAAACCCAGCAGCCGGTCTCATCGGAAAGCGGACGCTCGCGGAGTTCCAGGCCCACCAGCAGAACCACTACAACCCCCACCAGAACTACCACCAGAATCCTAGCCAAAATCTATATCTCCGCTCCCTAAAGCCCAGAACTTTCCAGCACTCTTCTCCGATTTCGCCTTTGTCTCCGACAGACTTCTCATCTGGGTCAGCAATTACAGGCTCCGACTCTTCGTCTTCCTCCTCGATTTTATCCCATCAGCGGTTCGGGTTGCCTCTGCTTCAGCAGCTCCGCCCTCAGCCCATTAACCAGACAGCACCGCCGGCGATGTCGTATGTTAACAATCTGGTGCCCAACAATCCGGTTCAGAACAACCCAGTTCAGACCCGGGGTTTGGACTCCGAGAAGAAGATGATCAGTAATACGCTGCAAGAGCTGGAGAAGCAGCTACTCGACGATAACGACGAGGACGACGAAGGCGACGCCGTTTCTGTCATTACTAAAAGCAACAGCGAGTGGTCCGAGACGATACAGAATCTGATGGGTTCGGCAGCTCCGAGTCAGTGCCAGAAGCCCGTTTCTCCGTCGCCCACTTCGTCTTCATCTTCGTCGTCCTCCGTGGCGTCTCCGGCGTCCTCCACCTGTTCCAAGCAGTCGCTCATGGAGGCCGCGACGGCCATTTCTGAAGGGAAATCCGAGGCTGCGGCGGAGATCCTCGCCCGGATGATGGCGACACAGGTCCCGAATCCGAGACCCAATTCAGAACAAAGGCTTCTGGAGTTCCTGGGTTTAGCTTTGAAGTCTCGGGTCAACCCGATTGATAATTCGCCGCCGGCGAACGAGCTTTTTGGGCAGGAGCATAGCGGGTCGATTCAGTTGCTTTACGAGTTATCTCCGTGTTTCAAACACGGGTTTATGGCTGCTAACCTCGCAATCCTTGAAGCGACCTTGACGGACCAATCAGCGACCAACAAGGTTCATGTGATTGACTTCGACATCGGGCATGGCGGTCAGTACATGCTCCTTTTCCAAGCGCTCTCAACGCGTCAGAATGTTAGGCCCGCCGTCGTGAAGATCACCACCGTCGCGGATAATGGCGGGGAGGGGAGGCTGAGAATGGTCCGTCAGAAGCTGAGTCATGCCGCCGAGCGACTCGGGGTCGGTCTGGAATTCAACGTAGTGAGCCAGAAAATCGGCGAGCTGAACCGGGACTCGCTGGGTTGCGAACCGGACGAGCCGATCGCCGTGAATTTCGCTTTTAAACTGTACAGCATGCCGGACGAGAGCGTGTCCACGGACAACCCCCGCGACGAGCTTCTGCGGCGCGTGAAGGGGCTGGCGCCGCGTGTGGTGACGCTGGTGGAGCAGGAGATGAACACCAACACCGCGCCCTTCATGGCGCGCGTAAATGAGTGCTGCGCCTACTACGGGGCGCTGCTGGAGTCGATCGAGGCGACGGTTCCGAGGGAGAACCCGGAGCGAGTCAAGGCGGAGGAGGCGCTGAGTCGGAAGATAGTGAACTCGGTCGCTTGCGAGGGGAGGGATCGCGTGGAAAGATGCGAAGTGTTTGGGAAGTGGCGGGCCCGCATGGGGATGGCGGGGTTCGAGTTGAGGCCCATGGGCCCAAATATGACCGAGTCGTTGAAAAATCGACTCGTATCGGAAAACCGAGTCAACTCGGGGTTCACGGTTAAGGAAGAGAATGGAGGGGTTTGCTTTGGTTGGATAAGCCGCACTCTCACCGTCGCTTCCGCTTGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

653

Amino Acids

71.07

Weight (kDa)

6.27

Isoelectric Point (pI)

51.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	282 - 652	2.8e-104	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52510
fragaria_vesca	FvH4_7g30100
malus_domestica	MD01G1206800.v1.1 MD07G1277400.v1.1
prunus_persica	Prupe.2G299400_v2.0.a1
pyrus_communis	pycom01g21720 pycom07g25240
rosa_chinensis	RchiOBHm_Chr1g0378081
rosa_laevigata	RLG00000026473 RLG00000035032
rosa_multiflora	Rmu_sc0001465.1_g000012
rosa_roxburghii	Rroxscaffold_156G00440300 Rroxscaffold_4G00280790
rosa_rugosa	Rorug01G0406200
rosa_samantha	Rh1AG423600 Rh1BG385000 Rh1CG399000 Rh1DG416200
rosa_wichuraiana	Rw1G037360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	544, 1534
AccBSI	CCGCTC	1 cut(s)	330
AclWI	GGATC	4 cut(s)	63, 126, 901, 1746
AcoI	YGGCCR	2 cut(s)	97, 870
AcsI	RAATTY	2 cut(s)	1364, 1444
AcuI	CTGAAG	2 cut(s)	461, 900
AcyI	GRCGYC	5 cut(s)	42, 678, 818, 827, 1535
AfaI	GTAC	2 cut(s)	1211, 1463
AfeI	AGCGCT	1 cut(s)	1230
AfiI	CCNNNNNNNGG	7 cut(s)	154, 221, 456, 589, 922, 1623, 1785
AflIII	ACRYGT	1 cut(s)	1238
AgsI	TTSAA	7 cut(s)	19, 197, 994, 1099, 1136, 1369, 1840
AhdI	GACNNNNNGTC	2 cut(s)	427, 1352
AjnI	CCWGG	2 cut(s)	255, 978
AjuI	GAANNNNNNNTTGG	2 cut(s)	177, 209
Alw26I	GTCTC	7 cut(s)	114, 230, 384, 713, 825, 940, 1002
AlwI	GGATC	4 cut(s)	63, 126, 901, 1746
AlwNI	CAGNNNCTG	2 cut(s)	733, 1327
Ama87I	CYCGRG	4 cut(s)	582, 999, 1349, 1873
Aor51HI	AGCGCT	1 cut(s)	1230
AoxI	GGCC	8 cut(s)	97, 258, 861, 870, 1253, 1776, 1808, 1816
ApaI	GGGCCC	2 cut(s)	1780, 1820
ApeKI	GCWGC	9 cut(s)	218, 481, 622, 640, 746, 896, 1115, 1611, 1630
ApoI	RAATTY	2 cut(s)	1364, 1444
ArsI	GACNNNNNNTTYG	2 cut(s)	571, 603
AspLEI	GCGC	9 cut(s)	1231, 1521, 1537, 1585, 1597, 1599, 1616, 1630, 1696
AsuC2I	CCSGG	5 cut(s)	583, 584, 916, 1403, 1670
AsuHPI	GGTGA	3 cut(s)	1264, 1558, 1927
AvaI	CYCGRG	4 cut(s)	582, 999, 1349, 1873
AvaII	GGWCC	5 cut(s)	157, 714, 934, 1150, 1315
BaeGI	GKGCMC	3 cut(s)	549, 1780, 1820
BanI	GGYRCC	2 cut(s)	544, 1534
BanII	GRGCYC	2 cut(s)	1780, 1820
BbsI	GAAGAC	2 cut(s)	423, 786
BbvCI	CCTCAGC	1 cut(s)	492
BbvI	GCAGC	9 cut(s)	230, 493, 609, 652, 758, 883, 1102, 1598, 1617
BccI	CCATC	6 cut(s)	80, 86, 459, 730, 916, 1783
BceAI	ACGGC	6 cut(s)	37, 112, 665, 885, 1244, 1424
BcgI	CGANNNNNNTGC	2 cut(s)	1054, 1088
BciT130I	CCWGG	2 cut(s)	257, 980
BclI	TGATCA	1 cut(s)	609
BcnI	CCSGG	5 cut(s)	583, 584, 916, 1403, 1670
BcoDI	GTCTC	7 cut(s)	114, 230, 384, 713, 825, 940, 1002
BfaI	CTAG	1 cut(s)	309
BfoI	RGCGCY	4 cut(s)	1232, 1538, 1631, 1697
BglI	GCCNNNNNGGC	1 cut(s)	869
Bme1390I	CCNGG	7 cut(s)	257, 583, 584, 916, 980, 1403, 1670
Bme18I	GGWCC	5 cut(s)	157, 714, 934, 1150, 1315
BmeRI	GACNNNNNGTC	2 cut(s)	427, 1352
BmeT110I	CYCGRG	4 cut(s)	582, 999, 1349, 1873
BmiI	GGNNCC	8 cut(s)	159, 418, 546, 936, 1536, 1656, 1778, 1818
BmrFI	CCNGG	7 cut(s)	257, 583, 584, 916, 980, 1403, 1670
BmrI	ACTGGG	1 cut(s)	566
BmsI	GCATC	1 cut(s)	1742
BmuI	ACTGGG	1 cut(s)	566
BoxI	GACNNNNGTC	1 cut(s)	932
BpiI	GAAGAC	2 cut(s)	423, 786
BpmI	CTGGAG	3 cut(s)	653, 992, 1655
Bpu10I	CCTNAGC	1 cut(s)	492
BpuMI	CCSGG	5 cut(s)	583, 584, 916, 1403, 1670
BsaHI	GRCGYC	5 cut(s)	42, 678, 818, 827, 1535
BsaI	GGTCTC	2 cut(s)	230, 940
BsaJI	CCNNGG	8 cut(s)	582, 583, 813, 891, 979, 1488, 1658, 1812
BsaWI	WCCGGW	2 cut(s)	556, 1423
Bsc4I	CCNNNNNNNGG	7 cut(s)	154, 221, 456, 589, 922, 1623, 1785
Bse118I	RCCGGY	3 cut(s)	221, 517, 1027
Bse1I	ACTGG	1 cut(s)	572
BseBI	CCWGG	2 cut(s)	257, 980
BseDI	CCNNGG	8 cut(s)	582, 583, 813, 891, 979, 1488, 1658, 1812
BseGI	GGATG	2 cut(s)	924, 1794
BseLI	CCNNNNNNNGG	7 cut(s)	154, 221, 456, 589, 922, 1623, 1785
BseMII	CTCAG	5 cut(s)	125, 506, 1298, 1319, 1688
BseNI	ACTGG	1 cut(s)	572
BsePI	GCGCGC	1 cut(s)	1595
BseRI	GAGGAG	3 cut(s)	42, 427, 1703
BseSI	GKGCMC	3 cut(s)	549, 1780, 1820
BseXI	GCAGC	9 cut(s)	230, 493, 609, 652, 758, 883, 1102, 1598, 1617
BseYI	CCCAGC	4 cut(s)	135, 143, 214, 1411
Bsh1285I	CGRYCG	3 cut(s)	1437, 1644, 1722
BshFI	GGCC	8 cut(s)	99, 260, 863, 872, 1255, 1778, 1810, 1818
BshNI	GGYRCC	2 cut(s)	544, 1534
BsiEI	CGRYCG	3 cut(s)	1437, 1644, 1722
BsiHKCI	CYCGRG	4 cut(s)	582, 999, 1349, 1873
BslFI	GGGAC	4 cut(s)	29, 154, 920, 1418
BslI	CCNNNNNNNGG	7 cut(s)	154, 221, 456, 589, 922, 1623, 1785
BsmAI	GTCTC	7 cut(s)	114, 230, 384, 713, 825, 940, 1002
BsmBI	CGTCTC	3 cut(s)	114, 713, 825
BsmFI	GGGAC	4 cut(s)	29, 154, 920, 1418
BsnI	GGCC	8 cut(s)	99, 260, 863, 872, 1255, 1778, 1810, 1818
Bso31I	GGTCTC	2 cut(s)	230, 940
BsoBI	CYCGRG	4 cut(s)	582, 999, 1349, 1873
Bsp120I	GGGCCC	2 cut(s)	1776, 1816
Bsp1286I	GDGCHC	3 cut(s)	549, 1780, 1820
Bsp1407I	TGTACA	1 cut(s)	1461
Bsp143I	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
Bsp19I	CCATGG	1 cut(s)	1812
BspANI	GGCC	8 cut(s)	99, 260, 863, 872, 1255, 1778, 1810, 1818
BspCNI	CTCAG	5 cut(s)	124, 505, 1299, 1320, 1689
BspLI	GGNNCC	8 cut(s)	159, 418, 546, 936, 1536, 1656, 1778, 1818
BspPI	GGATC	4 cut(s)	63, 126, 901, 1746
BspT107I	GGYRCC	2 cut(s)	544, 1534
BspTNI	GGTCTC	2 cut(s)	230, 940
BsrBI	CCGCTC	1 cut(s)	330
BsrFI	RCCGGY	3 cut(s)	221, 517, 1027
BsrGI	TGTACA	1 cut(s)	1461
BsrI	ACTGG	1 cut(s)	572
BssAI	RCCGGY	3 cut(s)	221, 517, 1027
BssECI	CCNNGG	8 cut(s)	582, 583, 813, 891, 979, 1488, 1658, 1812
BssHII	GCGCGC	1 cut(s)	1595
BssMI	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
BssNI	GRCGYC	5 cut(s)	42, 678, 818, 827, 1535
BssT1I	CCWWGG	1 cut(s)	1812
Bst2UI	CCWGG	2 cut(s)	257, 980
Bst4CI	ACNGT	5 cut(s)	1279, 1461, 1654, 1885, 1939
Bst6I	CTCTTC	3 cut(s)	364, 430, 1887
BstACI	GRCGYC	5 cut(s)	42, 678, 818, 827, 1535
BstAUI	TGTACA	1 cut(s)	1461
BstDEI	CTNAG	5 cut(s)	111, 492, 1307, 1328, 1697
BstDSI	CCRYGG	3 cut(s)	813, 1488, 1812
BstF5I	GGATG	2 cut(s)	924, 1794
BstH2I	RGCGCY	4 cut(s)	1232, 1538, 1631, 1697
BstHHI	GCGC	9 cut(s)	1231, 1521, 1537, 1585, 1597, 1599, 1616, 1630, 1696
BstKTI	GATC	9 cut(s)	71, 134, 177, 612, 909, 1272, 1437, 1644, 1741
BstMAI	GTCTC	7 cut(s)	114, 230, 384, 713, 825, 940, 1002
BstMBI	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
BstMCI	CGRYCG	3 cut(s)	1437, 1644, 1722
BstNI	CCWGG	2 cut(s)	257, 980
BstNSI	RCATGY	2 cut(s)	1216, 1471
BstPAI	GACNNNNGTC	1 cut(s)	932
BstSCI	CCNGG	7 cut(s)	255, 581, 582, 914, 978, 1401, 1668
BstSLI	GKGCMC	3 cut(s)	549, 1780, 1820
BstV1I	GCAGC	9 cut(s)	230, 493, 609, 652, 758, 883, 1102, 1598, 1617
BstV2I	GAAGAC	2 cut(s)	423, 786
BstX2I	RGATCY	1 cut(s)	906
BstYI	RGATCY	1 cut(s)	906
BsuRI	GGCC	8 cut(s)	99, 260, 863, 872, 1255, 1778, 1810, 1818
BtgI	CCRYGG	3 cut(s)	813, 1488, 1812
BtgZI	GCGATG	1 cut(s)	536
BtsCI	GGATG	2 cut(s)	924, 1794
BtsIMutI	CAGTG	1 cut(s)	764
CaiI	CAGNNNCTG	2 cut(s)	733, 1327
CfoI	GCGC	9 cut(s)	1231, 1521, 1537, 1585, 1597, 1599, 1616, 1630, 1696
Cfr10I	RCCGGY	3 cut(s)	221, 517, 1027
Cfr9I	CCCGGG	1 cut(s)	582
CseI	GACGC	8 cut(s)	31, 156, 250, 686, 807, 816, 1229, 1558
Csp6I	GTAC	2 cut(s)	1210, 1462
CviQI	GTAC	2 cut(s)	1210, 1462
DdeI	CTNAG	5 cut(s)	111, 492, 1307, 1328, 1697
DinI	GGCGCC	1 cut(s)	1536
DpnI	GATC	9 cut(s)	70, 133, 176, 611, 908, 1271, 1436, 1643, 1740
DpnII	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
DraI	TTTAAA	1 cut(s)	1456
DriI	GACNNNNNGTC	2 cut(s)	427, 1352
EaeI	YGGCCR	2 cut(s)	97, 870
Eam1104I	CTCTTC	3 cut(s)	364, 430, 1887
Eam1105I	GACNNNNNGTC	2 cut(s)	427, 1352
EarI	CTCTTC	3 cut(s)	364, 430, 1887
EciI	GGCGGA	5 cut(s)	39, 73, 476, 917, 1700
Eco130I	CCWWGG	1 cut(s)	1812
Eco24I	GRGCYC	2 cut(s)	1780, 1820
Eco31I	GGTCTC	2 cut(s)	230, 940
Eco47I	GGWCC	5 cut(s)	157, 714, 934, 1150, 1315
Eco47III	AGCGCT	1 cut(s)	1230
Eco57I	CTGAAG	2 cut(s)	461, 900
Eco88I	CYCGRG	4 cut(s)	582, 999, 1349, 1873
EcoO109I	RGGNCCY	1 cut(s)	934
EcoRI	GAATTC	1 cut(s)	1364
EcoRII	CCWGG	2 cut(s)	255, 978
EcoT14I	CCWWGG	1 cut(s)	1812
EcoT38I	GRGCYC	2 cut(s)	1780, 1820
EgeI	GGCGCC	1 cut(s)	1536
EheI	GGCGCC	1 cut(s)	1536
ErhI	CCWWGG	1 cut(s)	1812
Esp3I	CGTCTC	3 cut(s)	114, 713, 825
FaqI	GGGAC	4 cut(s)	29, 154, 920, 1418
FauI	CCCGC	7 cut(s)	1052, 1264, 1286, 1508, 1767, 1786, 1787
FbaI	TGATCA	1 cut(s)	609
FokI	GGATG	2 cut(s)	931, 1801
FriOI	GRGCYC	2 cut(s)	1780, 1820
FspBI	CTAG	1 cut(s)	309
GlaI	GCGC	9 cut(s)	1230, 1520, 1536, 1584, 1596, 1598, 1615, 1629, 1695
GsaI	CCCAGC	4 cut(s)	139, 147, 218, 1415
GsuI	CTGGAG	3 cut(s)	653, 992, 1655
HaeII	RGCGCY	4 cut(s)	1232, 1538, 1631, 1697
HaeIII	GGCC	8 cut(s)	99, 260, 863, 872, 1255, 1778, 1810, 1818
HgaI	GACGC	8 cut(s)	31, 156, 250, 686, 807, 816, 1229, 1558
HhaI	GCGC	9 cut(s)	1231, 1521, 1537, 1585, 1597, 1599, 1616, 1630, 1696
Hin1I	GRCGYC	5 cut(s)	42, 678, 818, 827, 1535
Hin6I	GCGC	9 cut(s)	1229, 1519, 1535, 1583, 1595, 1597, 1614, 1628, 1694
HinP1I	GCGC	9 cut(s)	1229, 1519, 1535, 1583, 1595, 1597, 1614, 1628, 1694
HincII	GTYRAC	3 cut(s)	535, 1006, 1870
HindII	GTYRAC	3 cut(s)	535, 1006, 1870
HpaI	GTTAAC	1 cut(s)	535
HphI	GGTGA	3 cut(s)	1264, 1558, 1927
Hpy166II	GTNNAC	6 cut(s)	535, 1006, 1488, 1714, 1870, 1881
Hpy188III	TCNNGA	5 cut(s)	9, 937, 971, 1264, 1361
Hpy8I	GTNNAC	6 cut(s)	535, 1006, 1488, 1714, 1870, 1881
HpyAV	CCTTC	4 cut(s)	665, 875, 1519, 1597
HpyCH4III	ACNGT	5 cut(s)	1279, 1461, 1654, 1885, 1939
HpyCH4IV	ACGT	1 cut(s)	1371
HpyCH4V	TGCA	2 cut(s)	4, 625
HpyF3I	CTNAG	5 cut(s)	111, 492, 1307, 1328, 1697
HpySE526I	ACGT	1 cut(s)	1371
Hsp92I	GRCGYC	5 cut(s)	42, 678, 818, 827, 1535
HspAI	GCGC	9 cut(s)	1229, 1519, 1535, 1583, 1595, 1597, 1614, 1628, 1694
KasI	GGCGCC	1 cut(s)	1534
KroI	GCCGGC	2 cut(s)	517, 1027
KroNI	GCCGGC	2 cut(s)	519, 1029
Ksp22I	TGATCA	1 cut(s)	609
KspAI	GTTAAC	1 cut(s)	535
Kzo9I	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
LmnI	GCTCC	9 cut(s)	144, 335, 422, 489, 754, 1051, 1221, 1558, 1672
Lsp1109I	GCAGC	9 cut(s)	230, 493, 609, 652, 758, 883, 1102, 1598, 1617
LweI	GCATC	1 cut(s)	1742
MaeI	CTAG	1 cut(s)	309
MaeII	ACGT	1 cut(s)	1371
MaeIII	GTNAC	1 cut(s)	1546
MalI	GATC	9 cut(s)	70, 133, 176, 611, 908, 1271, 1436, 1643, 1740
MbiI	CCGCTC	1 cut(s)	330
MboI	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
MflI	RGATCY	1 cut(s)	906
MhlI	GDGCHC	3 cut(s)	549, 1780, 1820
MluCI	AATT	6 cut(s)	191, 408, 952, 1018, 1364, 1444
MluI	ACGCGT	1 cut(s)	1238
Mly113I	GGCGCC	1 cut(s)	1535
MmeI	TCCRAC	4 cut(s)	407, 444, 1682, 1898
MreI	CGCCGGCG	2 cut(s)	517, 1027
MroNI	GCCGGC	2 cut(s)	517, 1027
MseI	TTAA	5 cut(s)	501, 534, 1455, 1887, 1957
MslI	CAYNNNNRTG	1 cut(s)	1787
MspA1I	CMGCKG	1 cut(s)	457
MspR9I	CCNGG	7 cut(s)	257, 583, 584, 916, 980, 1403, 1670
MvaI	CCWGG	2 cut(s)	257, 980
NaeI	GCCGGC	2 cut(s)	519, 1029
NarI	GGCGCC	1 cut(s)	1535
NciI	CCSGG	5 cut(s)	583, 584, 916, 1403, 1670
NcoI	CCATGG	1 cut(s)	1812
NdeII	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
NgoMIV	GCCGGC	2 cut(s)	517, 1027
NlaIV	GGNNCC	8 cut(s)	159, 418, 546, 936, 1536, 1656, 1778, 1818
NmeAIII	GCCGAG	1 cut(s)	1366
NmuCI	GTSAC	1 cut(s)	1546
NspI	RCATGY	2 cut(s)	1216, 1471
PaeI	GCATGC	1 cut(s)	1471
PauI	GCGCGC	1 cut(s)	1595
PcsI	WCGNNNNNNNCGW	9 cut(s)	654, 657, 663, 666, 672, 749, 788, 1028, 1646
PdiI	GCCGGC	2 cut(s)	519, 1029
PfeI	GAWTC	4 cut(s)	304, 730, 940, 1066
PflFI	GACNNNGTC	1 cut(s)	1831
Ple19I	CGATCG	2 cut(s)	1437, 1644
PluTI	GGCGCC	1 cut(s)	1538
PpuMI	RGGWCCY	1 cut(s)	934
PshAI	GACNNNNGTC	1 cut(s)	932
Psp5II	RGGWCCY	1 cut(s)	934
Psp6I	CCWGG	2 cut(s)	255, 978
PspFI	CCCAGC	4 cut(s)	135, 143, 214, 1411
PspGI	CCWGG	2 cut(s)	255, 978
PspN4I	GGNNCC	8 cut(s)	159, 418, 546, 936, 1536, 1656, 1778, 1818
PspOMI	GGGCCC	2 cut(s)	1776, 1816
PspPPI	RGGWCCY	1 cut(s)	934
PsrI	GAACNNNNNNTAC	2 cut(s)	107, 139
PstNI	CAGNNNCTG	2 cut(s)	733, 1327
PsuI	RGATCY	1 cut(s)	906
PsyI	GACNNNGTC	1 cut(s)	1831
PteI	GCGCGC	1 cut(s)	1595
PvuI	CGATCG	2 cut(s)	1437, 1644
RsaI	GTAC	2 cut(s)	1211, 1463
RsaNI	GTAC	2 cut(s)	1210, 1462
RseI	CAYNNNNRTG	1 cut(s)	1787
SaqAI	TTAA	5 cut(s)	501, 534, 1455, 1887, 1957
Sau3AI	GATC	9 cut(s)	68, 131, 174, 609, 906, 1269, 1434, 1641, 1738
ScrFI	CCNGG	7 cut(s)	257, 583, 584, 916, 980, 1403, 1670
SduI	GDGCHC	3 cut(s)	549, 1780, 1820
SfaNI	GCATC	1 cut(s)	1742
SfiI	GGCCNNNNNGGCC	1 cut(s)	869
SfoI	GGCGCC	1 cut(s)	1536
SgrAI	CRCCGGYG	2 cut(s)	517, 1027
SinI	GGWCC	5 cut(s)	157, 714, 934, 1150, 1315
SmaI	CCCGGG	1 cut(s)	584
SmiMI	CAYNNNNRTG	1 cut(s)	1787
SphI	GCATGC	1 cut(s)	1471
Sse9I	AATT	6 cut(s)	191, 408, 952, 1018, 1364, 1444
SspDI	GGCGCC	1 cut(s)	1534
SspMI	CTAG	1 cut(s)	309
StyD4I	CCNGG	7 cut(s)	255, 581, 582, 914, 978, 1401, 1668
StyI	CCWWGG	1 cut(s)	1812
TaaI	ACNGT	5 cut(s)	1279, 1461, 1654, 1885, 1939
TaiI	ACGT	1 cut(s)	1374
TaqI	TCGA	8 cut(s)	440, 648, 1064, 1188, 1640, 1644, 1800, 1846
TaqII	GACCGA	3 cut(s)	1346, 1708, 1844
TasI	AATT	6 cut(s)	191, 408, 952, 1018, 1364, 1444
TatI	WGTACW	2 cut(s)	1209, 1461
TauI	GCSGC	9 cut(s)	36, 89, 866, 902, 1027, 1340, 1519, 1540, 1929
TfiI	GAWTC	4 cut(s)	304, 730, 940, 1066
Tru1I	TTAA	5 cut(s)	501, 534, 1455, 1887, 1957
Tru9I	TTAA	5 cut(s)	501, 534, 1455, 1887, 1957
TscAI	CASTG	1 cut(s)	764
TseFI	GTSAC	1 cut(s)	1546
TseI	GCWGC	9 cut(s)	218, 481, 622, 640, 746, 896, 1115, 1611, 1630
Tsp45I	GTSAC	1 cut(s)	1546
TspDTI	ATGAA	5 cut(s)	107, 786, 1163, 1579, 1583
TspGWI	ACGGA	6 cut(s)	768, 802, 1080, 1163, 1307, 1505
TspMI	CCCGGG	1 cut(s)	582
TspRI	CASTG	1 cut(s)	764
Tth111I	GACNNNGTC	1 cut(s)	1831
VpaK11BI	GGWCC	5 cut(s)	157, 714, 934, 1150, 1315
XapI	RAATTY	2 cut(s)	1364, 1444
XceI	RCATGY	2 cut(s)	1216, 1471
XcmI	CCANNNNNNNNNTGG	1 cut(s)	151
XmaI	CCCGGG	1 cut(s)	582
XspI	CTAG	1 cut(s)	309

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.