Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000156

Orthogroup ID

OG0012402

Physical Location & Seq

Genomic Coordinates Reverse (-)

23999 .. 26011

Gene Structure 2013 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_156G00440300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGCAATCAGGGTTCAATTCCGGCAATCAGGGTCTGCCGGATTTTTACGCCGGAGGAGGGAGATCGATCGGCAGCACCATGAGCAACCACCCTTCACAGCCTCAATACCACCGATCCCAGCTTCCGGGGCTGTTCATGGACCCCACTGGTCCTCAGATCGGTCGCCAAACGCAGAATCCGCACCACAATACAGCCGGGCTCATCGGAAAAAGGACCCTGGCCGAGTTTCAATATCATCAGCACCCAAACCCCTACCAGCAGAATCTGACTAACCAGCAAAGCATGTATCTGCGGTCGCTCAAGCCCAGAACTACAGCCAATTCTCAGCACTCAAATTTCCAACACTCCTCCCCAATCTCGCCCCTGTCCCCAATTGACTTTTCATCTGCCTCGTCATATACAGGTTCGGAGAATTCCAATACTTCTTCCACAACATCCTCCATGTTATCTCAGCGATATAGGTTGCCCCTTCTTCAACAGCTCCGGCCGCAACCGGTAATTAACCCGATGTTTCAGGCATCCTCATCGCCTTACGTCAACCATAACAACACTGTGCAGCCTCTTCAGAACCAGATTGTTCAGAACCGGGTTCCGGTTTCGGCGATCGAGTCTGAGAAGAAGATGAATAACCCGGTTTCGTCCGCGGTTTCGTCTGTTGATTCTGAGAAGAAGATGATTGACCACAGGCTACAGGAATTGGAGAAGCAGCTCCTCGATGATAACGATGAGGAGGAGGAAGCAGGCGACGCCGTTTCGGTTATTACTAAGACCAACAGCGAGTGGTCCGAGACGATACAGAATCTGATCGGTCCGAATCAGACGACCCAGAAGCCGGTCTCCCCGTCGCCCACTTCGTCGTCGTCTTCATCCTCCTCGGTGGCGTCTCCGGCGACTCTGACGTGTTCAAAGCAGTCGCTGATGGAGGCCGCATCGGCCATTTCAGAAGGGAAATCCGAGGCCGCGGCTGAGATCCTCACGCGCCTGACCCAGGTCACGAACCCGAGACCGAATTCGGAGCAGAGGCTGCTTGAATTCATGGCTTCGGCGTTGAAGTCGCGGGTCAACCCGGTGGATAATCCGCCGCCGGTGTCGGAGCTTTTTACCCAGGAACACGCGGGGTCGACCCAGTTTCTCTACGAGCTCATACCCTGCTTCAGCCTCGGTTTCATAGCCGCTAACCTGGCAATTCTGGAAGCCACATTAGCGGACCAGTCGACGACCAATAAGGTCCATGTGATTGACTTCGATATTGGGCAGGGCGGTCAGTACAGGTACCTCCTGCGCGAGCTCTCCACGCGCCCGAATGGGAAATCCTCCGTCGTCAAAATCACCACCGTTCCTGATAATGGCGGCGAGGACAGATTGAGGTCGGTCCGTCAGAATCTGAGCCAAATGGCGAAGAAATTGGGTGTGGGTCTTGAATTCAACGTTGTGAGTCAGAAGCTGAGCGAGCTGAACCGGGAATCGCTGGGATGCGAACCGGACGAGCCGATCGCCGTGAACTTCGCTTTCAAATTGTACAGCATGCCGGACGAGAGTGTCTCCACGGACAACCCCCGAGACGAGCTCCTGCGGCGCGTGAAGGGACTCGCCCCGCGCGTGGTGACGCTGGTCGAACAAGAGCTCAACACCAACACCGCTCCATTCATGGCGCGCGTGAACGAGTCGTGCGCGTATTACGGGGCCCTGATGGACTCGGTCGAGGCGGTGTCGAATGACCACCAGGACCGAGTCAAAGCGGAGGAGGCGCTGAGTCGCAAGCTCGCGAACTCGGTCGCATGCGAAGGGAGGGACCGCGTTGAAAGATGTGAAGTGTTTGGGAAGTGGCGGGCCCGCATGGGAATGGCTGGGTTCGAGTTAAGGAGAATGAGCCAAAGTGAGACCGAGTCGTCAGGCCATCGACTCTGTTCGGGCTACCGAGTCCACCCGGGCTTCACTGTTAAAGAAGAAAACGGAGCCGTTTGCTTCGGTTGGAAAAGCCGCACTCTCACCGTCGCATCAGCTTGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

670

Amino Acids

73.79

Weight (kDa)

6.46

Isoelectric Point (pI)

52.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	303 - 670	2.1e-104	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52510
fragaria_vesca	FvH4_7g30100
malus_domestica	MD01G1206800.v1.1 MD07G1277400.v1.1
prunus_persica	Prupe.2G299400_v2.0.a1
pyrus_communis	pycom01g21720 pycom07g25240
rosa_chinensis	RchiOBHm_Chr1g0378081
rosa_laevigata	RLG00000026473 RLG00000035032
rosa_multiflora	Rmu_sc0001465.1_g000012
rosa_roxburghii	Rroxscaffold_156G00440300 Rroxscaffold_4G00280790
rosa_rugosa	Rorug01G0406200
rosa_samantha	Rh1AG423600 Rh1BG385000 Rh1CG399000 Rh1DG416200
rosa_wichuraiana	Rw1G037360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1538, 1888
Acc65I	GGTACC	1 cut(s)	1272
AccB1I	GGYRCC	1 cut(s)	1272
AccBSI	CCGCTC	1 cut(s)	1640
AccI	GTMKAC	2 cut(s)	1121, 1214
AclI	AACGTT	1 cut(s)	1428
AclWI	GGATC	2 cut(s)	108, 964
AcoI	YGGCCR	3 cut(s)	219, 485, 933
AcsI	RAATTY	5 cut(s)	334, 412, 1009, 1031, 1421
AcuI	CTGAAG	2 cut(s)	548, 1138
AcyI	GRCGYC	2 cut(s)	747, 881
AfaI	GTAC	3 cut(s)	1268, 1274, 1520
AfiI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 832, 988, 1346, 1600
AflIII	ACRYGT	1 cut(s)	899
AgeI	ACCGGT	1 cut(s)	493
AjiI	CACGTC	1 cut(s)	900
AjnI	CCWGG	5 cut(s)	216, 987, 1104, 1179, 1722
AjuI	GAANNNNNNNTTGG	2 cut(s)	364, 396
Alw21I	GWGCWC	4 cut(s)	1143, 1290, 1569, 1626
Alw26I	GTCTC	7 cut(s)	782, 841, 888, 997, 1546, 1554, 1874
AlwI	GGATC	2 cut(s)	108, 964
AlwNI	CAGNNNCTG	7 cut(s)	34, 265, 802, 916, 1024, 1384, 1444
Ama87I	CYCGRG	3 cut(s)	1000, 1557, 1927
AoxI	GGCC	8 cut(s)	219, 485, 924, 933, 957, 1683, 1830, 1894
ApaI	GGGCCC	2 cut(s)	1687, 1834
ApeKI	GCWGC	4 cut(s)	72, 556, 706, 1024
ApoI	RAATTY	5 cut(s)	334, 412, 1009, 1031, 1421
AsiGI	ACCGGT	1 cut(s)	493
Asp718I	GGTACC	1 cut(s)	1272
AspLEI	GCGC	9 cut(s)	981, 1284, 1299, 1578, 1599, 1654, 1656, 1673, 1750
AsuC2I	CCSGG	8 cut(s)	126, 196, 587, 632, 1067, 1460, 1928, 1929
AsuHPI	GGTGA	3 cut(s)	1321, 1615, 1981
AvaI	CYCGRG	3 cut(s)	1000, 1557, 1927
BaeGI	GKGCMC	2 cut(s)	1687, 1834
BanI	GGYRCC	1 cut(s)	1272
BanII	GRGCYC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
BbsI	GAAGAC	1 cut(s)	855
Bbv12I	GWGCWC	4 cut(s)	1143, 1290, 1569, 1626
BbvI	GCAGC	4 cut(s)	84, 568, 718, 1011
BccI	CCATC	3 cut(s)	913, 1684, 1905
BceAI	ACGGC	3 cut(s)	734, 1481, 1943
BcgI	CGANNNNNNTGC	2 cut(s)	507, 541
BciT130I	CCWGG	5 cut(s)	218, 989, 1106, 1181, 1724
BcnI	CCSGG	8 cut(s)	126, 196, 587, 632, 1067, 1460, 1928, 1929
BcoDI	GTCTC	7 cut(s)	782, 841, 888, 997, 1546, 1554, 1874
BfmI	CTRYAG	2 cut(s)	312, 689
BfoI	RGCGCY	1 cut(s)	1751
BglI	GCCNNNNNGGC	1 cut(s)	932
BlpI	GCTNAGC	1 cut(s)	1445
BmeT110I	CYCGRG	3 cut(s)	1000, 1557, 1927
BmgBI	CACGTC	1 cut(s)	900
BmiI	GGNNCC	9 cut(s)	141, 215, 591, 1274, 1684, 1685, 1793, 1832, 1957
BmrI	ACTGGG	1 cut(s)	1120
BmsI	GCATC	4 cut(s)	527, 938, 1463, 2006
BmuI	ACTGGG	1 cut(s)	1120
BoxI	GACNNNNGTC	2 cut(s)	989, 1610
BpiI	GAAGAC	1 cut(s)	855
BplI	GAGNNNNNCTC	4 cut(s)	1526, 1558, 1551, 1583
Bpu1102I	GCTNAGC	1 cut(s)	1445
BpuEI	CTTGAG	1 cut(s)	284
BpuMI	CCSGG	8 cut(s)	126, 196, 587, 632, 1067, 1460, 1928, 1929
Bsa29I	ATCGAT	1 cut(s)	65
BsaHI	GRCGYC	2 cut(s)	747, 881
BsaI	GGTCTC	3 cut(s)	841, 997, 1874
BsaWI	WCCGGW	3 cut(s)	493, 592, 1480
Bsc4I	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 832, 988, 1346, 1600
Bse118I	RCCGGY	3 cut(s)	493, 832, 1084
Bse1I	ACTGG	3 cut(s)	151, 1126, 1210
BseBI	CCWGG	5 cut(s)	218, 989, 1106, 1181, 1724
BseCI	ATCGAT	1 cut(s)	65
BseGI	GGATG	4 cut(s)	434, 518, 866, 1478
BseLI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 832, 988, 1346, 1600
BseMII	CTCAG	9 cut(s)	167, 338, 464, 603, 654, 957, 1376, 1436, 1742
BseNI	ACTGG	3 cut(s)	151, 1126, 1210
BsePI	GCGCGC	1 cut(s)	1652
BseRI	GAGGAG	7 cut(s)	69, 337, 701, 743, 746, 862, 1757
BseSI	GKGCMC	2 cut(s)	1687, 1834
BseX3I	CGGCCG	1 cut(s)	485
BseXI	GCAGC	4 cut(s)	84, 568, 718, 1011
BseYI	CCCAGC	3 cut(s)	117, 1468, 1847
BsgI	GTGCAG	1 cut(s)	575
Bsh1285I	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1494, 1701, 1776
BshFI	GGCC	8 cut(s)	221, 487, 926, 935, 959, 1685, 1832, 1896
BshNI	GGYRCC	1 cut(s)	1272
BshTI	ACCGGT	1 cut(s)	493
BshVI	ATCGAT	1 cut(s)	65
BsiEI	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1494, 1701, 1776
BsiHKAI	GWGCWC	4 cut(s)	1143, 1290, 1569, 1626
BsiHKCI	CYCGRG	3 cut(s)	1000, 1557, 1927
BslFI	GGGAC	3 cut(s)	352, 1599, 1805
BslI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 832, 988, 1346, 1600
BsmAI	GTCTC	7 cut(s)	782, 841, 888, 997, 1546, 1554, 1874
BsmBI	CGTCTC	3 cut(s)	782, 888, 1554
BsmFI	GGGAC	3 cut(s)	352, 1599, 1805
BsnI	GGCC	8 cut(s)	221, 487, 926, 935, 959, 1685, 1832, 1896
Bso31I	GGTCTC	3 cut(s)	841, 997, 1874
BsoBI	CYCGRG	3 cut(s)	1000, 1557, 1927
Bsp120I	GGGCCC	2 cut(s)	1683, 1830
Bsp1286I	GDGCHC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
Bsp1407I	TGTACA	1 cut(s)	1518
Bsp143I	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
Bsp1720I	GCTNAGC	1 cut(s)	1445
Bsp68I	TCGCGA	1 cut(s)	1766
BspANI	GGCC	8 cut(s)	221, 487, 926, 935, 959, 1685, 1832, 1896
BspCNI	CTCAG	9 cut(s)	166, 337, 463, 604, 655, 958, 1377, 1437, 1743
BspDI	ATCGAT	1 cut(s)	65
BspLI	GGNNCC	9 cut(s)	141, 215, 591, 1274, 1684, 1685, 1793, 1832, 1957
BspPI	GGATC	2 cut(s)	108, 964
BspT107I	GGYRCC	1 cut(s)	1272
BspTNI	GGTCTC	3 cut(s)	841, 997, 1874
BsrBI	CCGCTC	1 cut(s)	1640
BsrFI	RCCGGY	3 cut(s)	493, 832, 1084
BsrGI	TGTACA	1 cut(s)	1518
BsrI	ACTGG	3 cut(s)	151, 1126, 1210
BssAI	RCCGGY	3 cut(s)	493, 832, 1084
BssHII	GCGCGC	1 cut(s)	1652
BssMI	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
BssNI	GRCGYC	2 cut(s)	747, 881
Bst2UI	CCWGG	5 cut(s)	218, 989, 1106, 1181, 1724
Bst4CI	ACNGT	4 cut(s)	553, 1336, 1939, 1993
Bst6I	CTCTTC	1 cut(s)	567
BstACI	GRCGYC	2 cut(s)	747, 881
BstAPI	GCANNNNNTGC	1 cut(s)	1024
BstAUI	TGTACA	1 cut(s)	1518
BstDSI	CCRYGG	3 cut(s)	642, 960, 1545
BstENI	CCTNNNNNAGG	1 cut(s)	986
BstF5I	GGATG	4 cut(s)	434, 518, 866, 1478
BstH2I	RGCGCY	1 cut(s)	1751
BstHHI	GCGC	9 cut(s)	981, 1284, 1299, 1578, 1599, 1654, 1656, 1673, 1750
BstKTI	GATC	8 cut(s)	65, 69, 116, 159, 606, 807, 972, 1494
BstMAI	GTCTC	7 cut(s)	782, 841, 888, 997, 1546, 1554, 1874
BstMBI	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
BstMCI	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1494, 1701, 1776
BstNI	CCWGG	5 cut(s)	218, 989, 1106, 1181, 1724
BstNSI	RCATGY	3 cut(s)	286, 1528, 1782
BstPAI	GACNNNNGTC	2 cut(s)	989, 1610
BstSFI	CTRYAG	2 cut(s)	312, 689
BstSLI	GKGCMC	2 cut(s)	1687, 1834
BstV1I	GCAGC	4 cut(s)	84, 568, 718, 1011
BstV2I	GAAGAC	1 cut(s)	855
BstX2I	RGATCY	1 cut(s)	969
BstYI	RGATCY	1 cut(s)	969
BstZI	CGGCCG	1 cut(s)	485
Bsu15I	ATCGAT	1 cut(s)	65
BsuRI	GGCC	8 cut(s)	221, 487, 926, 935, 959, 1685, 1832, 1896
BsuTUI	ATCGAT	1 cut(s)	65
BtgI	CCRYGG	3 cut(s)	642, 960, 1545
BtgZI	GCGATG	1 cut(s)	510
BtrI	CACGTC	1 cut(s)	900
BtsCI	GGATG	4 cut(s)	434, 518, 866, 1478
BtsIMutI	CAGTG	3 cut(s)	144, 549, 1935
BtuMI	TCGCGA	1 cut(s)	1766
CaiI	CAGNNNCTG	7 cut(s)	34, 265, 802, 916, 1024, 1384, 1444
CfoI	GCGC	9 cut(s)	981, 1284, 1299, 1578, 1599, 1654, 1656, 1673, 1750
Cfr10I	RCCGGY	3 cut(s)	493, 832, 1084
Cfr42I	CCGCGG	2 cut(s)	645, 963
Cfr9I	CCCGGG	1 cut(s)	1927
ClaI	ATCGAT	1 cut(s)	65
CpoI	CGGWCCG	2 cut(s)	809, 1372
CseI	GACGC	3 cut(s)	755, 870, 1615
Csp6I	GTAC	3 cut(s)	1267, 1273, 1519
CspAI	ACCGGT	1 cut(s)	493
CspI	CGGWCCG	2 cut(s)	809, 1372
CviQI	GTAC	3 cut(s)	1267, 1273, 1519
DpnI	GATC	8 cut(s)	64, 68, 115, 158, 605, 806, 971, 1493
DpnII	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
DrdI	GACNNNNNNGTC	2 cut(s)	1538, 1888
DseDI	GACNNNNNNGTC	2 cut(s)	1538, 1888
EaeI	YGGCCR	3 cut(s)	219, 485, 933
EagI	CGGCCG	1 cut(s)	485
Eam1104I	CTCTTC	1 cut(s)	567
EarI	CTCTTC	1 cut(s)	567
EciI	GGCGGA	1 cut(s)	1068
Ecl136II	GAGCTC	4 cut(s)	1141, 1288, 1567, 1624
EclXI	CGGCCG	1 cut(s)	485
Eco24I	GRGCYC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
Eco31I	GGTCTC	3 cut(s)	841, 997, 1874
Eco52I	CGGCCG	1 cut(s)	485
Eco53kI	GAGCTC	4 cut(s)	1141, 1288, 1567, 1624
Eco57I	CTGAAG	2 cut(s)	548, 1138
Eco88I	CYCGRG	3 cut(s)	1000, 1557, 1927
EcoICRI	GAGCTC	4 cut(s)	1141, 1288, 1567, 1624
EcoNI	CCTNNNNNAGG	1 cut(s)	986
EcoO109I	RGGNCCY	3 cut(s)	213, 1683, 1684
EcoRI	GAATTC	4 cut(s)	412, 1009, 1031, 1421
EcoRII	CCWGG	5 cut(s)	216, 987, 1104, 1179, 1722
EcoT38I	GRGCYC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
Esp3I	CGTCTC	3 cut(s)	782, 888, 1554
FaqI	GGGAC	3 cut(s)	352, 1599, 1805
FauI	CCCGC	5 cut(s)	1050, 1108, 1602, 1821, 1841
FblI	GTMKAC	2 cut(s)	1121, 1214
FokI	GGATG	4 cut(s)	421, 505, 853, 1485
FriOI	GRGCYC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
GlaI	GCGC	9 cut(s)	980, 1283, 1298, 1577, 1598, 1653, 1655, 1672, 1749
GsaI	CCCAGC	3 cut(s)	121, 1472, 1851
HaeII	RGCGCY	1 cut(s)	1751
HaeIII	GGCC	8 cut(s)	221, 487, 926, 935, 959, 1685, 1832, 1896
HgaI	GACGC	3 cut(s)	755, 870, 1615
HhaI	GCGC	9 cut(s)	981, 1284, 1299, 1578, 1599, 1654, 1656, 1673, 1750
Hin1I	GRCGYC	2 cut(s)	747, 881
Hin6I	GCGC	9 cut(s)	979, 1282, 1297, 1576, 1597, 1652, 1654, 1671, 1748
HinP1I	GCGC	9 cut(s)	979, 1282, 1297, 1576, 1597, 1652, 1654, 1671, 1748
HincII	GTYRAC	4 cut(s)	538, 1063, 1122, 1215
HindII	GTYRAC	4 cut(s)	538, 1063, 1122, 1215
HphI	GGTGA	3 cut(s)	1321, 1615, 1981
Hpy166II	GTNNAC	7 cut(s)	538, 1063, 1122, 1215, 1501, 1660, 1924
Hpy188III	TCNNGA	5 cut(s)	994, 1190, 1340, 1418, 1765
Hpy8I	GTNNAC	7 cut(s)	538, 1063, 1122, 1215, 1501, 1660, 1924
Hpy99I	CGWCG	7 cut(s)	749, 847, 859, 862, 1219, 1322, 1997
HpyAV	CCTTC	5 cut(s)	102, 479, 938, 1576, 1778
HpyCH4III	ACNGT	4 cut(s)	553, 1336, 1939, 1993
HpyCH4IV	ACGT	3 cut(s)	534, 899, 1428
HpyCH4V	TGCA	2 cut(s)	4, 556
HpySE526I	ACGT	3 cut(s)	534, 899, 1428
Hsp92I	GRCGYC	2 cut(s)	747, 881
HspAI	GCGC	9 cut(s)	979, 1282, 1297, 1576, 1597, 1652, 1654, 1671, 1748
KpnI	GGTACC	1 cut(s)	1276
KspI	CCGCGG	2 cut(s)	645, 963
Kzo9I	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
LmnI	GCTCC	7 cut(s)	486, 714, 1015, 1093, 1572, 1645, 1955
Lsp1109I	GCAGC	4 cut(s)	84, 568, 718, 1011
LweI	GCATC	4 cut(s)	527, 938, 1463, 2006
MaeII	ACGT	3 cut(s)	534, 899, 1428
MaeIII	GTNAC	2 cut(s)	991, 1603
MalI	GATC	8 cut(s)	64, 68, 115, 158, 605, 806, 971, 1493
MbiI	CCGCTC	1 cut(s)	1640
MboI	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	1 cut(s)	969
MhlI	GDGCHC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
MmeI	TCCRAC	3 cut(s)	364, 1071, 1952
MseI	TTAA	4 cut(s)	501, 1859, 1941, 2011
MslI	CAYNNNNRTG	1 cut(s)	1841
MspA1I	CMGCKG	2 cut(s)	644, 962
MunI	CAATTG	1 cut(s)	372
MvaI	CCWGG	5 cut(s)	218, 989, 1106, 1181, 1724
NciI	CCSGG	8 cut(s)	126, 196, 587, 632, 1067, 1460, 1928, 1929
NdeII	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
NlaIV	GGNNCC	9 cut(s)	141, 215, 591, 1274, 1684, 1685, 1793, 1832, 1957
NmeAIII	GCCGAG	1 cut(s)	247
NmuCI	GTSAC	2 cut(s)	991, 1603
NruI	TCGCGA	1 cut(s)	1766
NspI	RCATGY	3 cut(s)	286, 1528, 1782
PaeI	GCATGC	2 cut(s)	1528, 1782
PauI	GCGCGC	1 cut(s)	1652
PcsI	WCGNNNNNNNCGW	3 cut(s)	720, 851, 1596
PfeI	GAWTC	7 cut(s)	175, 262, 659, 799, 814, 1381, 1463
PflFI	GACNNNGTC	3 cut(s)	1697, 1730, 1885
PinAI	ACCGGT	1 cut(s)	493
Ple19I	CGATCG	3 cut(s)	69, 606, 1494
PpuMI	RGGWCCY	1 cut(s)	213
PshAI	GACNNNNGTC	2 cut(s)	989, 1610
Psp124BI	GAGCTC	4 cut(s)	1143, 1290, 1569, 1626
Psp1406I	AACGTT	1 cut(s)	1428
Psp5II	RGGWCCY	1 cut(s)	213
Psp6I	CCWGG	5 cut(s)	216, 987, 1104, 1179, 1722
PspFI	CCCAGC	3 cut(s)	117, 1468, 1847
PspGI	CCWGG	5 cut(s)	216, 987, 1104, 1179, 1722
PspN4I	GGNNCC	9 cut(s)	141, 215, 591, 1274, 1684, 1685, 1793, 1832, 1957
PspOMI	GGGCCC	2 cut(s)	1683, 1830
PspPPI	RGGWCCY	1 cut(s)	213
PstNI	CAGNNNCTG	7 cut(s)	34, 265, 802, 916, 1024, 1384, 1444
PsuI	RGATCY	1 cut(s)	969
PsyI	GACNNNGTC	3 cut(s)	1697, 1730, 1885
PteI	GCGCGC	1 cut(s)	1652
PvuI	CGATCG	3 cut(s)	69, 606, 1494
RruI	TCGCGA	1 cut(s)	1766
RsaI	GTAC	3 cut(s)	1268, 1274, 1520
RsaNI	GTAC	3 cut(s)	1267, 1273, 1519
RseI	CAYNNNNRTG	1 cut(s)	1841
Rsr2I	CGGWCCG	2 cut(s)	809, 1372
RsrII	CGGWCCG	2 cut(s)	809, 1372
SacI	GAGCTC	4 cut(s)	1143, 1290, 1569, 1626
SacII	CCGCGG	2 cut(s)	645, 963
SalI	GTCGAC	2 cut(s)	1120, 1213
SaqAI	TTAA	4 cut(s)	501, 1859, 1941, 2011
Sau3AI	GATC	8 cut(s)	62, 66, 113, 156, 603, 804, 969, 1491
SduI	GDGCHC	7 cut(s)	201, 1143, 1290, 1569, 1626, 1687, 1834
SfaNI	GCATC	4 cut(s)	527, 938, 1463, 2006
SfcI	CTRYAG	2 cut(s)	312, 689
SfiI	GGCCNNNNNGGCC	1 cut(s)	932
Sfr303I	CCGCGG	2 cut(s)	645, 963
SgrAI	CRCCGGYG	1 cut(s)	1084
SgrBI	CCGCGG	2 cut(s)	645, 963
SmaI	CCCGGG	1 cut(s)	1929
SmiMI	CAYNNNNRTG	1 cut(s)	1841
SmlI	CTYRAG	1 cut(s)	299
SmoI	CTYRAG	1 cut(s)	299
SphI	GCATGC	2 cut(s)	1528, 1782
SstI	GAGCTC	4 cut(s)	1143, 1290, 1569, 1626
TaaI	ACNGT	4 cut(s)	553, 1336, 1939, 1993
TaiI	ACGT	3 cut(s)	537, 902, 1431
TaqII	GACCGA	8 cut(s)	149, 797, 1021, 1360, 1687, 1743, 1762, 1898
TatI	WGTACW	2 cut(s)	1266, 1518
TauI	GCSGC	9 cut(s)	490, 929, 962, 965, 1084, 1175, 1353, 1576, 1983
TfiI	GAWTC	7 cut(s)	175, 262, 659, 799, 814, 1381, 1463
Tru1I	TTAA	4 cut(s)	501, 1859, 1941, 2011
Tru9I	TTAA	4 cut(s)	501, 1859, 1941, 2011
TscAI	CASTG	3 cut(s)	151, 556, 1942
TseFI	GTSAC	2 cut(s)	991, 1603
TseI	GCWGC	4 cut(s)	72, 556, 706, 1024
Tsp45I	GTSAC	2 cut(s)	991, 1603
TspDTI	ATGAA	7 cut(s)	124, 372, 638, 855, 1024, 1156, 1636
TspGWI	ACGGA	4 cut(s)	1306, 1364, 1562, 1968
TspMI	CCCGGG	1 cut(s)	1927
TspRI	CASTG	3 cut(s)	151, 556, 1942
Tth111I	GACNNNGTC	3 cut(s)	1697, 1730, 1885
XagI	CCTNNNNNAGG	1 cut(s)	986
XapI	RAATTY	5 cut(s)	334, 412, 1009, 1031, 1421
XceI	RCATGY	3 cut(s)	286, 1528, 1782
XmaI	CCCGGG	1 cut(s)	1927
XmiI	GTMKAC	2 cut(s)	1121, 1214

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.