Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012402

Physical Location & Seq

Genomic Coordinates Reverse (-)

3231701 .. 3233689

Gene Structure 1989 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000026473

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1989 bp

ATGCAATCAGGGTTCAATTCCGGCAATCAGGGTCTGCCGGATTTTTACGCCGGAGGAGGGAGATCGATCGGCAGCACCATGAGCAACCACCCTTCACAGCCTCAGTACCACCGATCCCAGCTTCCGGGGCTGTTCATGGACCCCACTGGTCCTCAGATCGGTCGCCAAACGCAGAATCCGCACCACAATACAGCCGGGCTCATCGGAAAAAGGACTCTGGCCGAGTTTCAATATCATCAGCCCCAAAACCCCTACCAGCAGAATCTGACTAACCAGCAAAATATGTATCTGCGGTCGCTCAAGCCCAGAACTACAGCCAATTCTCAGCACTCAAATTTCCAACACTCCTCCCCAATCTCGCCTCTGTCCCCAATTGAATTTTCATCTGCCTCGTCATATACAGGTTCGGAGAATTCCAATACTTCTTCCACAACATCCTCCATGTTATCGCAGCGATATAGGTCGCCCCTTCTTCAACAGCTCCGGCCGCAACCGGTAATTAACCCGATGTTTCAGGCATCCTCATCGCCTTACGTCAACCATAACAACACTGTGCAGCCTCTTCAGAATCGGATTGTTCAGAACCGGGTTCCGGTTTCGGCGATCGAGTCTGAGAAGAAGGTTTCGTCTGTTGATTCTGAGAAGAAGATGATTGACCACAGGCTACAGGAATTGGAGAAGCAGCTCCTCGATGATAACGATGAGGAGGAGGAAGGAGGCGACGCCGTTTCGGTTATTACGAAGACCAACAGCGAGTGGTCCGAGACGATACAGAATCTGATCGGTCCGAATCAGACGACCCAGAAGCCGGTCTCCCCGTCGCCCACTTCGTCGTCGTCTTCATCCTCCTCGGTGGCGTCTCCGGCGACTCTGACGTGTTCAAAGCAGTCGCTGATGGAGGCCGCATCGGCCATTTCAGAAGGGAAATCCGAGGCCGCGGCTGAGATCCTCACGCGCCTGACCCAGGTCACGAACCCGAGACCCAATTCGGAACAGAGGCTGCTTGAGTTCATGGCTTCGGCGTTGAAGTCGCGGGTCAACCCGGTGGATAATCCGCCGCCGGTATCGGAGCTTTTTACCCAGGAACACGCCGGGTCGACCCAGTTTCTCTACGAGCTCATACCTTGCTTCAGCCTCGGTTTCATAGCCGCTAACCTGGCAATTCTGGAAGCCACATTAGCGGACCAGTCGACGACCAATAAGGTCCATGTGATTGACTTCGATATTGGGCAGGGCGGTCAGTACAGGTACCTCCTGCACGAGCTCTCCATGCGCCCGAATGGGAAATCCTCCGTCGTCAAAATCACCACCGTTCCTGATAATGGCGGCGAGGACAGGTTGAGGTCAGTCCGTCAGAATCTGAGCCAAATGGCGAAGAAATTTGGTGTGGGTCTTGAATTCAACGTTGTGAGTCAGAAGCTGAGCGAGCTGAACCGGGAATCGCTGGGATGCGAACCGGACGAGCCGATCGCCGTGAACTTCGCTTTCAAATTGTACAGCATGCCGGACGAGAGCGTCTCCACGGACAACCCCCGAGACGAGCTCCTGCGGCGCGTGAAGGGACTCGCCCCGCGCGTGGTGACGCTGGTCGAACAAGAGCTCAACACCAACACCGCTCCATTCATGGCGCGCGTGAACGAGTCGTGCGCGTATTACGGGGCCCTGATGGACTCGGTCGACGCGGTGGCGAATGACCACCAGGACCGAGTCAAAGCGGAGGAGGCGCTGAGTCGCAAGCTCGCGAACTCGGTCGCTTGCGAAGGGAGGGACCGCGTTGAAAGATGTGAAGTGTTTGGGAAGTGGCGGGCCCGCATGGGAATGGCTGGGTTCGAGTTAAGGAGAATGAGCCAAAGCGTGACCGAGTCGTTAGGCCTTCGACTCAGTTCGGGCAACCGAGTCCACCCGGGCTTCACCGTTAAAGAAGAAAACGGAGCCGTTTGCTTCGGTTGGAAAAGCCGCACTCTCACCGTCGCATCAGCTTGGCGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

GRAS

Protein Analysis

663

Amino Acids

72.93

Weight (kDa)

6.56

Isoelectric Point (pI)

53.09

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GRAS	PF03514	295 - 662	2.8e-104	GRAS domain family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012402)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G52510
fragaria_vesca	FvH4_7g30100
malus_domestica	MD01G1206800.v1.1 MD07G1277400.v1.1
prunus_persica	Prupe.2G299400_v2.0.a1
pyrus_communis	pycom01g21720 pycom07g25240
rosa_chinensis	RchiOBHm_Chr1g0378081
rosa_laevigata	RLG00000026473 RLG00000035032
rosa_multiflora	Rmu_sc0001465.1_g000012
rosa_roxburghii	Rroxscaffold_156G00440300 Rroxscaffold_4G00280790
rosa_rugosa	Rorug01G0406200
rosa_samantha	Rh1AG423600 Rh1BG385000 Rh1CG399000 Rh1DG416200
rosa_wichuraiana	Rw1G037360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1514
Acc65I	GGTACC	1 cut(s)	1248
AccB1I	GGYRCC	1 cut(s)	1248
AccBSI	CCGCTC	1 cut(s)	1616
AccI	GTMKAC	3 cut(s)	1097, 1190, 1677
AclI	AACGTT	1 cut(s)	1404
AclWI	GGATC	2 cut(s)	108, 940
AcoI	YGGCCR	3 cut(s)	219, 485, 909
AcsI	RAATTY	5 cut(s)	334, 377, 412, 1379, 1397
AcuI	CTGAAG	2 cut(s)	548, 1114
AcyI	GRCGYC	2 cut(s)	723, 857
AfaI	GTAC	4 cut(s)	107, 1244, 1250, 1496
AfiI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 808, 964, 1322, 1576
AflIII	ACRYGT	1 cut(s)	875
AgeI	ACCGGT	1 cut(s)	493
AjiI	CACGTC	1 cut(s)	876
AjnI	CCWGG	4 cut(s)	963, 1080, 1155, 1698
AjuI	GAANNNNNNNTTGG	2 cut(s)	364, 396
Alw21I	GWGCWC	4 cut(s)	1119, 1266, 1545, 1602
Alw26I	GTCTC	6 cut(s)	758, 817, 864, 973, 1522, 1530
AlwI	GGATC	2 cut(s)	108, 940
AlwNI	CAGNNNCTG	7 cut(s)	34, 265, 778, 892, 1000, 1360, 1420
Ama87I	CYCGRG	3 cut(s)	976, 1533, 1903
AoxI	GGCC	8 cut(s)	219, 485, 900, 909, 933, 1659, 1806, 1870
ApaI	GGGCCC	2 cut(s)	1663, 1810
ApeKI	GCWGC	5 cut(s)	72, 451, 556, 682, 1000
ApoI	RAATTY	5 cut(s)	334, 377, 412, 1379, 1397
AsiGI	ACCGGT	1 cut(s)	493
Asp718I	GGTACC	1 cut(s)	1248
AspLEI	GCGC	8 cut(s)	957, 1275, 1554, 1575, 1630, 1632, 1649, 1726
AsuC2I	CCSGG	8 cut(s)	126, 196, 587, 1043, 1093, 1436, 1904, 1905
AsuHPI	GGTGA	4 cut(s)	1297, 1591, 1903, 1957
AvaI	CYCGRG	3 cut(s)	976, 1533, 1903
AvaII	GGWCC	8 cut(s)	139, 149, 759, 785, 1183, 1204, 1702, 1768
BaeGI	GKGCMC	2 cut(s)	1663, 1810
BanI	GGYRCC	1 cut(s)	1248
BanII	GRGCYC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
BauI	CACGAG	1 cut(s)	1259
BbsI	GAAGAC	2 cut(s)	749, 831
Bbv12I	GWGCWC	4 cut(s)	1119, 1266, 1545, 1602
BbvI	GCAGC	5 cut(s)	84, 463, 568, 694, 987
BccI	CCATC	2 cut(s)	889, 1660
BceAI	ACGGC	3 cut(s)	710, 1457, 1919
BcgI	CGANNNNNNTGC	2 cut(s)	507, 541
BciT130I	CCWGG	4 cut(s)	965, 1082, 1157, 1700
BcnI	CCSGG	8 cut(s)	126, 196, 587, 1043, 1093, 1436, 1904, 1905
BcoDI	GTCTC	6 cut(s)	758, 817, 864, 973, 1522, 1530
BfmI	CTRYAG	2 cut(s)	312, 665
BfoI	RGCGCY	1 cut(s)	1727
BglI	GCCNNNNNGGC	1 cut(s)	908
BlpI	GCTNAGC	1 cut(s)	1421
Bme18I	GGWCC	8 cut(s)	139, 149, 759, 785, 1183, 1204, 1702, 1768
BmeT110I	CYCGRG	3 cut(s)	976, 1533, 1903
BmgBI	CACGTC	1 cut(s)	876
BmiI	GGNNCC	8 cut(s)	141, 591, 1250, 1660, 1661, 1769, 1808, 1933
BmrI	ACTGGG	1 cut(s)	1096
BmsI	GCATC	4 cut(s)	527, 914, 1439, 1982
BmuI	ACTGGG	1 cut(s)	1096
BoxI	GACNNNNGTC	2 cut(s)	965, 1586
BpiI	GAAGAC	2 cut(s)	749, 831
BplI	GAGNNNNNCTC	4 cut(s)	1502, 1534, 1527, 1559
Bpu1102I	GCTNAGC	1 cut(s)	1421
BpuEI	CTTGAG	2 cut(s)	284, 1025
BpuMI	CCSGG	8 cut(s)	126, 196, 587, 1043, 1093, 1436, 1904, 1905
Bsa29I	ATCGAT	1 cut(s)	65
BsaHI	GRCGYC	2 cut(s)	723, 857
BsaI	GGTCTC	2 cut(s)	817, 973
BsaJI	CCNNGG	9 cut(s)	125, 849, 930, 936, 963, 1080, 1135, 1521, 1903
BsaWI	WCCGGW	3 cut(s)	493, 592, 1456
BsaXI	ACNNNNNCTCC	2 cut(s)	1250, 1280
Bsc4I	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 808, 964, 1322, 1576
Bse118I	RCCGGY	3 cut(s)	493, 808, 1060
Bse1I	ACTGG	3 cut(s)	151, 1102, 1186
BseBI	CCWGG	4 cut(s)	965, 1082, 1157, 1700
BseCI	ATCGAT	1 cut(s)	65
BseDI	CCNNGG	9 cut(s)	125, 849, 930, 936, 963, 1080, 1135, 1521, 1903
BseGI	GGATG	4 cut(s)	434, 518, 842, 1454
BseLI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 808, 964, 1322, 1576
BseNI	ACTGG	3 cut(s)	151, 1102, 1186
BsePI	GCGCGC	1 cut(s)	1628
BseRI	GAGGAG	7 cut(s)	69, 337, 677, 719, 722, 838, 1733
BseSI	GKGCMC	2 cut(s)	1663, 1810
BseX3I	CGGCCG	1 cut(s)	485
BseXI	GCAGC	5 cut(s)	84, 463, 568, 694, 987
BseYI	CCCAGC	3 cut(s)	117, 1444, 1823
BsgI	GTGCAG	2 cut(s)	575, 1241
Bsh1285I	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1470, 1677, 1752
BshFI	GGCC	8 cut(s)	221, 487, 902, 911, 935, 1661, 1808, 1872
BshNI	GGYRCC	1 cut(s)	1248
BshTI	ACCGGT	1 cut(s)	493
BshVI	ATCGAT	1 cut(s)	65
BsiEI	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1470, 1677, 1752
BsiHKAI	GWGCWC	4 cut(s)	1119, 1266, 1545, 1602
BsiHKCI	CYCGRG	3 cut(s)	976, 1533, 1903
BslFI	GGGAC	3 cut(s)	352, 1575, 1781
BslI	CCNNNNNNNGG	8 cut(s)	57, 124, 158, 592, 808, 964, 1322, 1576
BsmAI	GTCTC	6 cut(s)	758, 817, 864, 973, 1522, 1530
BsmBI	CGTCTC	4 cut(s)	758, 864, 1522, 1530
BsmFI	GGGAC	3 cut(s)	352, 1575, 1781
BsnI	GGCC	8 cut(s)	221, 487, 902, 911, 935, 1661, 1808, 1872
Bso31I	GGTCTC	2 cut(s)	817, 973
BsoBI	CYCGRG	3 cut(s)	976, 1533, 1903
Bsp120I	GGGCCC	2 cut(s)	1659, 1806
Bsp1286I	GDGCHC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
Bsp1407I	TGTACA	1 cut(s)	1494
Bsp143I	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
Bsp1720I	GCTNAGC	1 cut(s)	1421
Bsp68I	TCGCGA	1 cut(s)	1742
BspANI	GGCC	8 cut(s)	221, 487, 902, 911, 935, 1661, 1808, 1872
BspDI	ATCGAT	1 cut(s)	65
BspLI	GGNNCC	8 cut(s)	141, 591, 1250, 1660, 1661, 1769, 1808, 1933
BspPI	GGATC	2 cut(s)	108, 940
BspT107I	GGYRCC	1 cut(s)	1248
BspTNI	GGTCTC	2 cut(s)	817, 973
BsrBI	CCGCTC	1 cut(s)	1616
BsrFI	RCCGGY	3 cut(s)	493, 808, 1060
BsrGI	TGTACA	1 cut(s)	1494
BsrI	ACTGG	3 cut(s)	151, 1102, 1186
BssAI	RCCGGY	3 cut(s)	493, 808, 1060
BssECI	CCNNGG	9 cut(s)	125, 849, 930, 936, 963, 1080, 1135, 1521, 1903
BssHII	GCGCGC	1 cut(s)	1628
BssMI	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
BssNI	GRCGYC	2 cut(s)	723, 857
BssSI	CACGAG	1 cut(s)	1259
Bst2BI	CACGAG	1 cut(s)	1259
Bst2UI	CCWGG	4 cut(s)	965, 1082, 1157, 1700
Bst4CI	ACNGT	4 cut(s)	553, 1312, 1915, 1969
Bst6I	CTCTTC	1 cut(s)	567
BstACI	GRCGYC	2 cut(s)	723, 857
BstAUI	TGTACA	1 cut(s)	1494
BstC8I	GCNNGC	8 cut(s)	1427, 1502, 1630, 1736, 1740, 1756, 1806, 1810
BstDSI	CCRYGG	2 cut(s)	936, 1521
BstENI	CCTNNNNNAGG	1 cut(s)	962
BstF5I	GGATG	4 cut(s)	434, 518, 842, 1454
BstH2I	RGCGCY	1 cut(s)	1727
BstHHI	GCGC	8 cut(s)	957, 1275, 1554, 1575, 1630, 1632, 1649, 1726
BstKTI	GATC	8 cut(s)	65, 69, 116, 159, 606, 783, 948, 1470
BstMAI	GTCTC	6 cut(s)	758, 817, 864, 973, 1522, 1530
BstMBI	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
BstMCI	CGRYCG	8 cut(s)	69, 163, 296, 488, 606, 1470, 1677, 1752
BstNI	CCWGG	4 cut(s)	965, 1082, 1157, 1700
BstNSI	RCATGY	1 cut(s)	1504
BstPAI	GACNNNNGTC	2 cut(s)	965, 1586
BstSFI	CTRYAG	2 cut(s)	312, 665
BstSLI	GKGCMC	2 cut(s)	1663, 1810
BstV1I	GCAGC	5 cut(s)	84, 463, 568, 694, 987
BstV2I	GAAGAC	2 cut(s)	749, 831
BstX2I	RGATCY	1 cut(s)	945
BstYI	RGATCY	1 cut(s)	945
BstZI	CGGCCG	1 cut(s)	485
Bsu15I	ATCGAT	1 cut(s)	65
BsuRI	GGCC	8 cut(s)	221, 487, 902, 911, 935, 1661, 1808, 1872
BsuTUI	ATCGAT	1 cut(s)	65
BtgI	CCRYGG	2 cut(s)	936, 1521
BtgZI	GCGATG	1 cut(s)	510
BtrI	CACGTC	1 cut(s)	876
BtsCI	GGATG	4 cut(s)	434, 518, 842, 1454
BtsIMutI	CAGTG	2 cut(s)	144, 549
BtuMI	TCGCGA	1 cut(s)	1742
Cac8I	GCNNGC	8 cut(s)	1427, 1502, 1630, 1736, 1740, 1756, 1806, 1810
CaiI	CAGNNNCTG	7 cut(s)	34, 265, 778, 892, 1000, 1360, 1420
CfoI	GCGC	8 cut(s)	957, 1275, 1554, 1575, 1630, 1632, 1649, 1726
Cfr10I	RCCGGY	3 cut(s)	493, 808, 1060
Cfr42I	CCGCGG	1 cut(s)	939
Cfr9I	CCCGGG	1 cut(s)	1903
ClaI	ATCGAT	1 cut(s)	65
CpoI	CGGWCCG	1 cut(s)	785
CseI	GACGC	5 cut(s)	731, 846, 1504, 1591, 1688
Csp6I	GTAC	4 cut(s)	106, 1243, 1249, 1495
CspAI	ACCGGT	1 cut(s)	493
CspI	CGGWCCG	1 cut(s)	785
CviAII	CATG	9 cut(s)	79, 136, 442, 1012, 1208, 1270, 1501, 1624, 1813
CviQI	GTAC	4 cut(s)	106, 1243, 1249, 1495
DpnI	GATC	8 cut(s)	64, 68, 115, 158, 605, 782, 947, 1469
DpnII	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
DrdI	GACNNNNNNGTC	1 cut(s)	1514
DseDI	GACNNNNNNGTC	1 cut(s)	1514
EaeI	YGGCCR	3 cut(s)	219, 485, 909
EagI	CGGCCG	1 cut(s)	485
Eam1104I	CTCTTC	1 cut(s)	567
EarI	CTCTTC	1 cut(s)	567
EciI	GGCGGA	1 cut(s)	1044
Ecl136II	GAGCTC	4 cut(s)	1117, 1264, 1543, 1600
EclXI	CGGCCG	1 cut(s)	485
Eco147I	AGGCCT	1 cut(s)	1872
Eco24I	GRGCYC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
Eco31I	GGTCTC	2 cut(s)	817, 973
Eco47I	GGWCC	8 cut(s)	139, 149, 759, 785, 1183, 1204, 1702, 1768
Eco52I	CGGCCG	1 cut(s)	485
Eco53kI	GAGCTC	4 cut(s)	1117, 1264, 1543, 1600
Eco57I	CTGAAG	2 cut(s)	548, 1114
Eco88I	CYCGRG	3 cut(s)	976, 1533, 1903
EcoICRI	GAGCTC	4 cut(s)	1117, 1264, 1543, 1600
EcoNI	CCTNNNNNAGG	1 cut(s)	962
EcoO109I	RGGNCCY	2 cut(s)	1659, 1660
EcoRI	GAATTC	2 cut(s)	412, 1397
EcoRII	CCWGG	4 cut(s)	963, 1080, 1155, 1698
EcoT38I	GRGCYC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
Esp3I	CGTCTC	4 cut(s)	758, 864, 1522, 1530
FaeI	CATG	9 cut(s)	82, 139, 445, 1015, 1211, 1273, 1504, 1627, 1816
FaqI	GGGAC	3 cut(s)	352, 1575, 1781
FatI	CATG	9 cut(s)	78, 135, 441, 1011, 1207, 1269, 1500, 1623, 1812
FauI	CCCGC	4 cut(s)	1026, 1578, 1797, 1817
FblI	GTMKAC	3 cut(s)	1097, 1190, 1677
FokI	GGATG	4 cut(s)	421, 505, 829, 1461
FriOI	GRGCYC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
GlaI	GCGC	8 cut(s)	956, 1274, 1553, 1574, 1629, 1631, 1648, 1725
GsaI	CCCAGC	3 cut(s)	121, 1448, 1827
HaeII	RGCGCY	1 cut(s)	1727
HaeIII	GGCC	8 cut(s)	221, 487, 902, 911, 935, 1661, 1808, 1872
HgaI	GACGC	5 cut(s)	731, 846, 1504, 1591, 1688
HhaI	GCGC	8 cut(s)	957, 1275, 1554, 1575, 1630, 1632, 1649, 1726
Hin1I	GRCGYC	2 cut(s)	723, 857
Hin1II	CATG	9 cut(s)	82, 139, 445, 1015, 1211, 1273, 1504, 1627, 1816
Hin6I	GCGC	8 cut(s)	955, 1273, 1552, 1573, 1628, 1630, 1647, 1724
HinP1I	GCGC	8 cut(s)	955, 1273, 1552, 1573, 1628, 1630, 1647, 1724
HincII	GTYRAC	5 cut(s)	538, 1039, 1098, 1191, 1678
HindII	GTYRAC	5 cut(s)	538, 1039, 1098, 1191, 1678
HphI	GGTGA	4 cut(s)	1297, 1591, 1903, 1957
Hpy166II	GTNNAC	8 cut(s)	538, 1039, 1098, 1191, 1477, 1636, 1678, 1900
Hpy188III	TCNNGA	5 cut(s)	970, 1166, 1316, 1394, 1741
Hpy8I	GTNNAC	8 cut(s)	538, 1039, 1098, 1191, 1477, 1636, 1678, 1900
Hpy99I	CGWCG	8 cut(s)	725, 823, 835, 838, 1195, 1298, 1682, 1973
HpyAV	CCTTC	8 cut(s)	102, 479, 613, 707, 914, 1552, 1754, 1883
HpyCH4III	ACNGT	4 cut(s)	553, 1312, 1915, 1969
HpyCH4IV	ACGT	3 cut(s)	534, 875, 1404
HpyCH4V	TGCA	3 cut(s)	4, 556, 1258
HpySE526I	ACGT	3 cut(s)	534, 875, 1404
Hsp92I	GRCGYC	2 cut(s)	723, 857
Hsp92II	CATG	9 cut(s)	82, 139, 445, 1015, 1211, 1273, 1504, 1627, 1816
HspAI	GCGC	8 cut(s)	955, 1273, 1552, 1573, 1628, 1630, 1647, 1724
KpnI	GGTACC	1 cut(s)	1252
KspI	CCGCGG	1 cut(s)	939
Kzo9I	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
LmnI	GCTCC	6 cut(s)	486, 690, 1069, 1548, 1621, 1931
Lsp1109I	GCAGC	5 cut(s)	84, 463, 568, 694, 987
LweI	GCATC	4 cut(s)	527, 914, 1439, 1982
MaeII	ACGT	3 cut(s)	534, 875, 1404
MaeIII	GTNAC	3 cut(s)	967, 1579, 1855
MalI	GATC	8 cut(s)	64, 68, 115, 158, 605, 782, 947, 1469
MbiI	CCGCTC	1 cut(s)	1616
MboI	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	1 cut(s)	945
MhlI	GDGCHC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
MmeI	TCCRAC	2 cut(s)	364, 1928
MseI	TTAA	4 cut(s)	501, 1835, 1917, 1987
MslI	CAYNNNNRTG	1 cut(s)	1817
MspA1I	CMGCKG	1 cut(s)	938
MunI	CAATTG	1 cut(s)	372
MvaI	CCWGG	4 cut(s)	965, 1082, 1157, 1700
NciI	CCSGG	8 cut(s)	126, 196, 587, 1043, 1093, 1436, 1904, 1905
NdeII	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
NlaIII	CATG	9 cut(s)	82, 139, 445, 1015, 1211, 1273, 1504, 1627, 1816
NlaIV	GGNNCC	8 cut(s)	141, 591, 1250, 1660, 1661, 1769, 1808, 1933
NmeAIII	GCCGAG	1 cut(s)	247
NmuCI	GTSAC	3 cut(s)	967, 1579, 1855
NruI	TCGCGA	1 cut(s)	1742
NspI	RCATGY	1 cut(s)	1504
PaeI	GCATGC	1 cut(s)	1504
PauI	GCGCGC	1 cut(s)	1628
PceI	AGGCCT	1 cut(s)	1872
PcsI	WCGNNNNNNNCGW	4 cut(s)	696, 737, 827, 1572
PfeI	GAWTC	8 cut(s)	175, 262, 568, 635, 775, 790, 1357, 1439
PflFI	GACNNNGTC	3 cut(s)	1673, 1706, 1861
PinAI	ACCGGT	1 cut(s)	493
Ple19I	CGATCG	3 cut(s)	69, 606, 1470
PshAI	GACNNNNGTC	2 cut(s)	965, 1586
Psp124BI	GAGCTC	4 cut(s)	1119, 1266, 1545, 1602
Psp1406I	AACGTT	1 cut(s)	1404
Psp6I	CCWGG	4 cut(s)	963, 1080, 1155, 1698
PspFI	CCCAGC	3 cut(s)	117, 1444, 1823
PspGI	CCWGG	4 cut(s)	963, 1080, 1155, 1698
PspN4I	GGNNCC	8 cut(s)	141, 591, 1250, 1660, 1661, 1769, 1808, 1933
PspOMI	GGGCCC	2 cut(s)	1659, 1806
PstNI	CAGNNNCTG	7 cut(s)	34, 265, 778, 892, 1000, 1360, 1420
PsuI	RGATCY	1 cut(s)	945
PsyI	GACNNNGTC	3 cut(s)	1673, 1706, 1861
PteI	GCGCGC	1 cut(s)	1628
PvuI	CGATCG	3 cut(s)	69, 606, 1470
RruI	TCGCGA	1 cut(s)	1742
RsaI	GTAC	4 cut(s)	107, 1244, 1250, 1496
RsaNI	GTAC	4 cut(s)	106, 1243, 1249, 1495
RseI	CAYNNNNRTG	1 cut(s)	1817
Rsr2I	CGGWCCG	1 cut(s)	785
RsrII	CGGWCCG	1 cut(s)	785
SacI	GAGCTC	4 cut(s)	1119, 1266, 1545, 1602
SacII	CCGCGG	1 cut(s)	939
SalI	GTCGAC	3 cut(s)	1096, 1189, 1676
SaqAI	TTAA	4 cut(s)	501, 1835, 1917, 1987
Sau3AI	GATC	8 cut(s)	62, 66, 113, 156, 603, 780, 945, 1467
SduI	GDGCHC	7 cut(s)	201, 1119, 1266, 1545, 1602, 1663, 1810
SfaNI	GCATC	4 cut(s)	527, 914, 1439, 1982
SfcI	CTRYAG	2 cut(s)	312, 665
SfiI	GGCCNNNNNGGCC	1 cut(s)	908
Sfr303I	CCGCGG	1 cut(s)	939
SgrBI	CCGCGG	1 cut(s)	939
SinI	GGWCC	8 cut(s)	139, 149, 759, 785, 1183, 1204, 1702, 1768
SmaI	CCCGGG	1 cut(s)	1905
SmiMI	CAYNNNNRTG	1 cut(s)	1817
SmlI	CTYRAG	2 cut(s)	299, 1004
SmoI	CTYRAG	2 cut(s)	299, 1004
SphI	GCATGC	1 cut(s)	1504
SseBI	AGGCCT	1 cut(s)	1872
SstI	GAGCTC	4 cut(s)	1119, 1266, 1545, 1602
StuI	AGGCCT	1 cut(s)	1872
TaaI	ACNGT	4 cut(s)	553, 1312, 1915, 1969
TaiI	ACGT	3 cut(s)	537, 878, 1407
TaqII	GACCGA	6 cut(s)	149, 773, 1663, 1719, 1738, 1874
TatI	WGTACW	2 cut(s)	1242, 1494
TauI	GCSGC	9 cut(s)	490, 905, 938, 941, 1060, 1151, 1329, 1552, 1959
TfiI	GAWTC	8 cut(s)	175, 262, 568, 635, 775, 790, 1357, 1439
Tru1I	TTAA	4 cut(s)	501, 1835, 1917, 1987
Tru9I	TTAA	4 cut(s)	501, 1835, 1917, 1987
TscAI	CASTG	2 cut(s)	151, 556
TseFI	GTSAC	3 cut(s)	967, 1579, 1855
TseI	GCWGC	5 cut(s)	72, 451, 556, 682, 1000
Tsp45I	GTSAC	3 cut(s)	967, 1579, 1855
TspDTI	ATGAA	6 cut(s)	124, 372, 831, 1000, 1132, 1612
TspGWI	ACGGA	4 cut(s)	1282, 1340, 1538, 1944
TspMI	CCCGGG	1 cut(s)	1903
TspRI	CASTG	2 cut(s)	151, 556
Tth111I	GACNNNGTC	3 cut(s)	1673, 1706, 1861
VpaK11BI	GGWCC	8 cut(s)	139, 149, 759, 785, 1183, 1204, 1702, 1768
XagI	CCTNNNNNAGG	1 cut(s)	962
XapI	RAATTY	5 cut(s)	334, 377, 412, 1379, 1397
XceI	RCATGY	1 cut(s)	1504
XmaI	CCCGGG	1 cut(s)	1903
XmiI	GTMKAC	3 cut(s)	1097, 1190, 1677

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.