MD07G1302400.v1.1

ATPase domain of DNA mismatch repair MUTS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0015276
Physical Location & Seq
Forward (+)
36071357 .. 36077277
5921 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1302400.v1.1.491

Sequence Viewer

Length: 2634 bp
ATGCGGGCCACCCGGCCCACAATCCATAAGGCGGCTAGTCGCCCAACACCACACGCTGCCTTGTCTGGTCATCCTGTGAGCTCTGAGAAACCAGTCCCGCCACTTGTAGCCGTTGGCAGCCAAACGCTCCGCCACCGCCACACAGAGCTCCCAGAAATGTTATTTTCTTGCGCTCCGTTTGGAATCTCCAACCCCATCGTCTTCCTCACCTTCACCAATCTCGGCCACCGCGCCAGTAATTTACTCAAAACCAAACGCGCCGCCTCAATCTCCTCCCTAAATTACCAGTCCGCCACAGCATCGCAGGCGCACCATGACAGCCTTAGGGTTTTGGAATGGGACAAGCTCTGCGACTCCGTCGCCTCCTTCGCGCGTACTTCGTTAGGCCGCGAAGCCACCAAGGCACAGCTTTGGTCTTTGAGTCAGACGTACGAAGAAAGCCTCAGGCTTTTGGACGAAACCAACGCCGCCGTCGAAATGCGCAAGCACGGCGGTTGCTCTTTGGATTTCACCGGCGTCAATGTCGTTTTGGTGCAATCTGCCATACAACATGTTCGGAGGAGTTCGCCACTGGACGGGGACGAAGCGCTAGCTGTGGTGGCGATGCTGCAGTACGCGGAGAATTTGCAGAGTAATCTGAAAGCTGCTATCAAGGAAGATGCAGACTGGTACACACGTTTTATGCCGCTTTCGGAAGTGATAATGGAATTCGAAGTTAATCGGTCACTAGTTAAGCTGATACAGCAAGTTATAGATGAAGATGGCAGCGTTAAAGACTCTGCGAGTCCTAATCTGAAACGATTACGCAGTCAAGTTCGGACGCTTGAGGGAAAGATTAATCAGTTAATGGACAGCCTAATTAGGAATGACAAGAGTGAAACGCCGTCCCTGGAAGTGAGTAATGTTGATGGCAGGTGGTGCATTAAATCAACTGCTAACGAACTGAAAATTTTTAAGGGTCTGCTGTTGCCCAGTCGTTCAGGCATAGGAAGCATTGTCGAGCCATTATCTGCTATCCCTCTAAATGATGAATTGCAACGAACAAGGGTACTAGTTTCAGAAGCTGAGGCAGAAGTTCTCTCAATGTTAACAGAAAAGATGCAAATGGATCTTGATAACATTGAACAACTATCCAACAGAATAATCCAATTGGATGTGGTCCATGCCCGAGCAACTTATGGTCTATCATTTGGGGGAACATATCCAAAAATATTTCTACCAGGAGGGCATGGCCCTTCCACTTTGACCAACTTATCGGGGAACAAACATCAACAAGTATCTGATCCCTCAAAGAGTGAATGGGTGTTGTATCTGCCGAAAGCTTATCATCCTCTATTACTTCACCAACATAGAGAAAATTTACAGAAGGCTAGGAAGGAGTTAAAGAATGCCACTATGGAAATCAAAAGAAAAGTACAAGGAGAAAATGTTGCACAGAAAGCGGGAAAAGATACCAATATTTCATCCTTAGAATTTAAGGCTAAAGAACTGGAACAAGCTCGACCAATTCCAGTTGATTTTTTCATAGCTAAAAAAACACGAGTTTTGGTTATCACTGGCCCTAATACAGGGGGTAAAACCATTTGCCTAAAGACTGTAGGATTGGCAGCCATGATGGCAAAATCAGGTCTTTATGTTTTATGTTCCGAATCAGTACAAATCCCTTGGTTTGATTCAGTTTTTGCTGACATTGGTGATGAACAATCCCTGACCCAATCGCTTTCCACCTTTTCCAGCCACTTAAAACATATAAGCGACATCCAATCACAGTCAACAAGTCGTTCACTTGTGCTACTAGATGAGGTTGGTGCAGGAACAAATCCTCTCGAAGGAGCAGCACTGGGGATGTCTCTCCTGGAGTCTTTTGCCGAAACTGGTGCTTTGTTGACAATTGCTACAACACATCATGGTGAACTCAAAACCCTGAAATACAGCAACGAGGCCTTTGAAAATGCATGTATGGAGTTTGATGAAGTGAAGTTAAAGCCAACTTACAGGATTCTCTGGGGAGTACCAGGCCGTTCAAATGCAATCAATATAGCTGAAAGGTTAGGACTACCCGGTAAAGTTGTAGATAATGCCCGTGAACTATATGGTGCAGCTAGTGCAGGAATAGATGAGGTGATAATTGACATGGAACGGTTAAAGCAGGATTTTCAAGAGCTTTTACATGAAGGACAACATCATCTGATGCTCTCAAGAGAGTCGTATGAGAAACTGTTGGTTGCCAAAAGGAAGATTATGGAACATAGTAGTGATCAAAGATATAGGAAGATACGAGAAATATCTGAGGCTGCTGCAATGGCCCGTTCTATCCTTCACAAAAAAGTACGAACACGCCGTGCATCTGCAATTCAATCTCTGCAACCTACTTTAACGCATACAAGCCAGCATAAATTGGAAACTAACAGTCAACGCACAAGAATAGATGATGGACATTCAACGGAAAATAGGAGTGCATCCTCTTTATCGCCATCAGTTAAATTTGAGCTTCCCAAGGTTGGCAATATGGTGTTTGTTTCTTCCCTTGGAAAGAAAGCTGCAGTTTTGAGAGTGGATCCATCTAAAGAGGAAATAGTGGTTCAAGCCGGAAACATGAAGCTGAAATTGAAACTCGACGACATTAAGGCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MutS_V

Protein Analysis

878

Amino Acids

97.0

Weight (kDa)

8.87

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MutS_V PF00488 516 - 697 1.2e-34 MutS domain V
MSSS PF20297 834 - 875 3.2e-10 MutS2 and Smr-associated SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G54090
fragaria_vesca FvH4_7g33260 FvH4_7g33260
malus_domestica MD07G1302400.v1.1
prunus_persica Prupe.2G321600_v2.0.a1
pyrus_communis pycom07g27570
rosa_chinensis RchiOBHm_Chr1g0383251
rosa_laevigata RLG00000026119
rosa_multiflora Rmu_sc0007173.1_g000024
rosa_roxburghii Rroxscaffold_4G00277470
rosa_rugosa Rorug01G0439800
rosa_samantha Rh1AG465500 Rh1BG422900 Rh1CG436100 Rh1DG455600
rosa_wichuraiana Rw1G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 903
Acc16I TGCGCA 1 cut(s) 482
Acc36I ACCTGC 1 cut(s) 903
AccII CGCG 6 cut(s) 231, 258, 371, 373, 390, 617
AclWI GGATC 4 cut(s) 1116, 1277, 2552, 2565
AcoI YGGCCR 1 cut(s) 223
AcsI RAATTY 6 cut(s) 622, 707, 948, 1357, 1472, 2483
AcyI GRCGYC 1 cut(s) 516
AdeI CACNNNGTG 1 cut(s) 2342
AfaI GTAC 9 cut(s) 376, 431, 614, 671, 1050, 1416, 1656, 2013, 2331
AfeI AGCGCT 1 cut(s) 588
AfiI CCNNNNNNNGG 5 cut(s) 31, 575, 1568, 1829, 2501
AflIII ACRYGT 2 cut(s) 550, 674
AgsI TTSAA 8 cut(s) 1124, 1949, 2025, 2159, 2357, 2442, 2585, 2611
AhlI ACTAGT 2 cut(s) 727, 1051
AjnI CCWGG 4 cut(s) 888, 1219, 1854, 2014
Alw21I GWGCWC 2 cut(s) 83, 150
Alw26I GTCTC 1 cut(s) 1854
AlwI GGATC 4 cut(s) 1116, 1277, 2552, 2565
AlwNI CAGNNNCTG 1 cut(s) 1064
Ama87I CYCGRG 1 cut(s) 1167
Aor51HI AGCGCT 1 cut(s) 588
AoxI GGCC 9 cut(s) 6, 14, 223, 385, 1231, 1558, 1941, 2017, 2304
ApoI RAATTY 6 cut(s) 622, 707, 948, 1357, 1472, 2483
AseI ATTAAT 1 cut(s) 837
AspLEI GCGC 7 cut(s) 173, 233, 260, 310, 373, 483, 589
AspS9I GGNCC 6 cut(s) 6, 15, 1159, 1232, 1559, 2305
AsuC2I CCSGG 2 cut(s) 13, 2061
AsuHPI GGTGA 7 cut(s) 199, 205, 502, 1334, 1706, 1922, 2134
AsuII TTCGAA 1 cut(s) 711
AsuNHI GCTAGC 1 cut(s) 589
AvaI CYCGRG 1 cut(s) 1167
AvaII GGWCC 1 cut(s) 1159
AxyI CCTNAGG 2 cut(s) 323, 443
BaeI ACNNNNGTAYC 2 cut(s) 661, 694
BamHI GGATCC 1 cut(s) 2557
BanII GRGCYC 2 cut(s) 83, 150
BauI CACGAG 1 cut(s) 1539
BbsI GAAGAC 1 cut(s) 193
Bbv12I GWGCWC 2 cut(s) 83, 150
BbvCI CCTCAGC 1 cut(s) 1065
BccI CCATC 7 cut(s) 203, 755, 902, 1609, 2426, 2482, 2569
BceAI ACGGC 6 cut(s) 95, 455, 505, 868, 2004, 2325
BcgI CGANNNNNNTGC 2 cut(s) 1859, 1893
BciT130I CCWGG 4 cut(s) 890, 1221, 1856, 2016
BclI TGATCA 1 cut(s) 2257
BcnI CCSGG 2 cut(s) 13, 2061
BcoDI GTCTC 1 cut(s) 1854
BcuI ACTAGT 2 cut(s) 727, 1051
BfaI CTAG 7 cut(s) 36, 590, 728, 1052, 1371, 1796, 2103
BfmI CTRYAG 3 cut(s) 608, 1596, 2541
BfoI RGCGCY 1 cut(s) 590
BfuAI ACCTGC 1 cut(s) 903
BglI GCCNNNNNGGC 2 cut(s) 401, 1616
Bme1390I CCNGG 6 cut(s) 13, 890, 1221, 1856, 2016, 2061
Bme18I GGWCC 1 cut(s) 1159
BmeT110I CYCGRG 1 cut(s) 1167
BmgT120I GGNCC 6 cut(s) 6, 15, 1159, 1232, 1559, 2305
BmiI GGNNCC 1 cut(s) 2559
BmrFI CCNGG 6 cut(s) 13, 890, 1221, 1856, 2016, 2061
BmrI ACTGGG 2 cut(s) 966, 1850
BmsI GCATC 7 cut(s) 308, 594, 649, 1089, 2181, 2354, 2468
BmtI GCTAGC 1 cut(s) 593
BmuI ACTGGG 2 cut(s) 966, 1850
BpiI GAAGAC 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 1877
Bpu10I CCTNAGC 1 cut(s) 1065
Bpu14I TTCGAA 1 cut(s) 711
BpuEI CTTGAG 2 cut(s) 845, 2182
BpuMI CCSGG 2 cut(s) 13, 2061
BsaHI GRCGYC 1 cut(s) 516
BsaJI CCNNGG 5 cut(s) 399, 888, 1664, 2496, 2527
BsaXI ACNNNNNCTCC 2 cut(s) 1413, 1443
Bsc4I CCNNNNNNNGG 5 cut(s) 31, 575, 1568, 1829, 2501
Bse118I RCCGGY 1 cut(s) 512
Bse21I CCTNAGG 2 cut(s) 323, 443
Bse3DI GCAATG 1 cut(s) 2307
BseBI CCWGG 4 cut(s) 890, 1221, 1856, 2016
BseDI CCNNGG 5 cut(s) 399, 888, 1664, 2496, 2527
BseGI GGATG 7 cut(s) 70, 1159, 1327, 1463, 1758, 1851, 2459
BseLI CCNNNNNNNGG 5 cut(s) 31, 575, 1568, 1829, 2501
BseMI GCAATG 1 cut(s) 2307
BseMII CTCAG 4 cut(s) 75, 457, 1056, 2280
BseRI GAGGAG 2 cut(s) 262, 574
BsgI GTGCAG 3 cut(s) 1830, 2118, 2127
Bsh1236I CGCG 6 cut(s) 231, 258, 371, 373, 390, 617
BshFI GGCC 9 cut(s) 8, 16, 225, 387, 1233, 1560, 1943, 2019, 2306
BsiHKAI GWGCWC 2 cut(s) 83, 150
BsiHKCI CYCGRG 1 cut(s) 1167
BsiSI CCGG 4 cut(s) 13, 513, 2061, 2589
BsiWI CGTACG 1 cut(s) 429
BslFI GGGAC 4 cut(s) 80, 353, 593, 871
BslI CCNNNNNNNGG 5 cut(s) 31, 575, 1568, 1829, 2501
BsmAI GTCTC 1 cut(s) 1854
BsmFI GGGAC 4 cut(s) 80, 353, 593, 871
BsmI GAATGC 1 cut(s) 1393
BsnI GGCC 9 cut(s) 8, 16, 225, 387, 1233, 1560, 1943, 2019, 2306
BsoBI CYCGRG 1 cut(s) 1167
Bsp119I TTCGAA 1 cut(s) 711
Bsp1286I GDGCHC 2 cut(s) 83, 150
Bsp143I GATC 4 cut(s) 1108, 1282, 2257, 2557
BspANI GGCC 9 cut(s) 8, 16, 225, 387, 1233, 1560, 1943, 2019, 2306
BspCNI CTCAG 4 cut(s) 76, 456, 1057, 2281
BspFNI CGCG 6 cut(s) 231, 258, 371, 373, 390, 617
BspLI GGNNCC 1 cut(s) 2559
BspMAI CTGCAG 2 cut(s) 612, 2545
BspMI ACCTGC 1 cut(s) 903
BspOI GCTAGC 1 cut(s) 593
BspPI GGATC 4 cut(s) 1116, 1277, 2552, 2565
BspT104I TTCGAA 1 cut(s) 711
BsrDI GCAATG 1 cut(s) 2307
BsrFI RCCGGY 1 cut(s) 512
BssAI RCCGGY 1 cut(s) 512
BssECI CCNNGG 5 cut(s) 399, 888, 1664, 2496, 2527
BssMI GATC 4 cut(s) 1108, 1282, 2257, 2557
BssNI GRCGYC 1 cut(s) 516
BssSI CACGAG 1 cut(s) 1539
BssT1I CCWWGG 4 cut(s) 399, 1664, 2496, 2527
Bst2BI CACGAG 1 cut(s) 1539
Bst2UI CCWGG 4 cut(s) 890, 1221, 1856, 2016
Bst4CI ACNGT 5 cut(s) 1597, 1770, 2142, 2220, 2411
BstACI GRCGYC 1 cut(s) 516
BstAPI GCANNNNNTGC 2 cut(s) 918, 2105
BstBI TTCGAA 1 cut(s) 711
BstC8I GCNNGC 5 cut(s) 6, 306, 485, 591, 2390
BstDEI CTNAG 6 cut(s) 84, 323, 443, 1065, 1468, 2289
BstENI CCTNNNNNAGG 2 cut(s) 1566, 1827
BstF5I GGATG 7 cut(s) 70, 1159, 1327, 1463, 1758, 1851, 2459
BstFNI CGCG 6 cut(s) 231, 258, 371, 373, 390, 617
BstH2I RGCGCY 1 cut(s) 590
BstHHI GCGC 7 cut(s) 173, 233, 260, 310, 373, 483, 589
BstKTI GATC 4 cut(s) 1111, 1285, 2260, 2560
BstMAI GTCTC 1 cut(s) 1854
BstMBI GATC 4 cut(s) 1108, 1282, 2257, 2557
BstNI CCWGG 4 cut(s) 890, 1221, 1856, 2016
BstNSI RCATGY 2 cut(s) 554, 1959
BstSCI CCNGG 6 cut(s) 11, 888, 1219, 1854, 2014, 2059
BstSFI CTRYAG 3 cut(s) 608, 1596, 2541
BstUI CGCG 6 cut(s) 231, 258, 371, 373, 390, 617
BstV2I GAAGAC 1 cut(s) 193
BstX2I RGATCY 2 cut(s) 1108, 2557
BstYI RGATCY 2 cut(s) 1108, 2557
Bsu36I CCTNAGG 2 cut(s) 323, 443
BsuRI GGCC 9 cut(s) 8, 16, 225, 387, 1233, 1560, 1943, 2019, 2306
BtgZI GCGATG 2 cut(s) 285, 617
BtsCI GGATG 7 cut(s) 70, 1159, 1327, 1463, 1758, 1851, 2459
BtsIMutI CAGTG 3 cut(s) 569, 1554, 1838
BveI ACCTGC 1 cut(s) 903
Cac8I GCNNGC 5 cut(s) 6, 306, 485, 591, 2390
CaiI CAGNNNCTG 1 cut(s) 1064
CfoI GCGC 7 cut(s) 173, 233, 260, 310, 373, 483, 589
Cfr10I RCCGGY 1 cut(s) 512
Cfr13I GGNCC 6 cut(s) 6, 15, 1159, 1232, 1559, 2305
CseI GACGC 2 cut(s) 505, 829
Csp6I GTAC 9 cut(s) 375, 430, 613, 670, 1049, 1415, 1655, 2012, 2330
CviQI GTAC 9 cut(s) 375, 430, 613, 670, 1049, 1415, 1655, 2012, 2330
DdeI CTNAG 6 cut(s) 84, 323, 443, 1065, 1468, 2289
DpnI GATC 4 cut(s) 1110, 1284, 2259, 2559
DpnII GATC 4 cut(s) 1108, 1282, 2257, 2557
DraIII CACNNNGTG 1 cut(s) 2342
EaeI YGGCCR 1 cut(s) 223
EciI GGCGGA 2 cut(s) 119, 280
Ecl136II GAGCTC 2 cut(s) 81, 148
Eco130I CCWWGG 4 cut(s) 399, 1664, 2496, 2527
Eco147I AGGCCT 1 cut(s) 1943
Eco24I GRGCYC 2 cut(s) 83, 150
Eco47I GGWCC 1 cut(s) 1159
Eco47III AGCGCT 1 cut(s) 588
Eco53kI GAGCTC 2 cut(s) 81, 148
Eco81I CCTNAGG 2 cut(s) 323, 443
Eco88I CYCGRG 1 cut(s) 1167
EcoICRI GAGCTC 2 cut(s) 81, 148
EcoNI CCTNNNNNAGG 2 cut(s) 1566, 1827
EcoRI GAATTC 1 cut(s) 707
EcoRII CCWGG 4 cut(s) 888, 1219, 1854, 2014
EcoT14I CCWWGG 4 cut(s) 399, 1664, 2496, 2527
EcoT22I ATGCAT 1 cut(s) 1957
EcoT38I GRGCYC 2 cut(s) 83, 150
ErhI CCWWGG 4 cut(s) 399, 1664, 2496, 2527
FaqI GGGAC 4 cut(s) 80, 353, 593, 871
FauI CCCGC 2 cut(s) 105, 1435
FbaI TGATCA 1 cut(s) 2257
FokI GGATG 7 cut(s) 57, 1166, 1314, 1450, 1745, 1858, 2446
FriOI GRGCYC 2 cut(s) 83, 150
FspBI CTAG 7 cut(s) 36, 590, 728, 1052, 1371, 1796, 2103
FspI TGCGCA 1 cut(s) 482
GlaI GCGC 7 cut(s) 172, 232, 259, 309, 372, 482, 588
GsuI CTGGAG 1 cut(s) 1877
HaeII RGCGCY 1 cut(s) 590
HaeIII GGCC 9 cut(s) 8, 16, 225, 387, 1233, 1560, 1943, 2019, 2306
HapII CCGG 4 cut(s) 13, 513, 2061, 2589
HgaI GACGC 2 cut(s) 505, 829
HhaI GCGC 7 cut(s) 173, 233, 260, 310, 373, 483, 589
Hin1I GRCGYC 1 cut(s) 516
Hin6I GCGC 7 cut(s) 171, 231, 258, 308, 371, 481, 587
HinP1I GCGC 7 cut(s) 171, 231, 258, 308, 371, 481, 587
HincII GTYRAC 4 cut(s) 1089, 1773, 1887, 2414
HindII GTYRAC 4 cut(s) 1089, 1773, 1887, 2414
HindIII AAGCTT 1 cut(s) 1320
HpaI GTTAAC 1 cut(s) 1089
HpaII CCGG 4 cut(s) 13, 513, 2061, 2589
HphI GGTGA 7 cut(s) 199, 205, 502, 1334, 1706, 1922, 2134
Hpy166II GTNNAC 8 cut(s) 672, 1089, 1773, 1784, 1887, 1913, 2087, 2414
Hpy188III TCNNGA 4 cut(s) 1112, 1826, 2159, 2199
Hpy8I GTNNAC 8 cut(s) 672, 1089, 1773, 1784, 1887, 1913, 2087, 2414
Hpy99I CGWCG 3 cut(s) 362, 476, 2621
HpyAV CCTTC 8 cut(s) 220, 376, 1245, 1360, 1369, 1823, 2168, 2327
HpyCH4III ACNGT 5 cut(s) 1597, 1770, 2142, 2220, 2411
HpyCH4IV ACGT 2 cut(s) 428, 676
HpyF3I CTNAG 6 cut(s) 84, 323, 443, 1065, 1468, 2289
HpySE526I ACGT 2 cut(s) 428, 676
Hsp92I GRCGYC 1 cut(s) 516
HspAI GCGC 7 cut(s) 171, 231, 258, 308, 371, 481, 587
Ksp22I TGATCA 1 cut(s) 2257
KspAI GTTAAC 1 cut(s) 1089
Kzo9I GATC 4 cut(s) 1108, 1282, 2257, 2557
LmnI GCTCC 4 cut(s) 132, 153, 178, 1832
LweI GCATC 7 cut(s) 308, 594, 649, 1089, 2181, 2354, 2468
MaeI CTAG 7 cut(s) 36, 590, 728, 1052, 1371, 1796, 2103
MaeII ACGT 2 cut(s) 428, 676
MaeIII GTNAC 1 cut(s) 723
MalI GATC 4 cut(s) 1110, 1284, 2259, 2559
MboI GATC 4 cut(s) 1108, 1282, 2257, 2557
MboII GAAGA 7 cut(s) 193, 446, 668, 770, 2248, 2284, 2514
MfeI CAATTG 2 cut(s) 1148, 1890
MflI RGATCY 2 cut(s) 1108, 2557
MhlI GDGCHC 2 cut(s) 83, 150
MlyI GAGTC 6 cut(s) 347, 430, 770, 793, 1868, 2213
MmeI TCCRAC 2 cut(s) 213, 1158
Mph1103I ATGCAT 1 cut(s) 1957
MslI CAYNNNNRTG 2 cut(s) 1908, 2253
MspI CCGG 4 cut(s) 13, 513, 2061, 2589
MspR9I CCNGG 6 cut(s) 13, 890, 1221, 1856, 2016, 2061
MunI CAATTG 2 cut(s) 1148, 1890
Mva1269I GAATGC 1 cut(s) 1393
MvaI CCWGG 4 cut(s) 890, 1221, 1856, 2016
MvnI CGCG 6 cut(s) 231, 258, 371, 373, 390, 617
NciI CCSGG 2 cut(s) 13, 2061
NdeII GATC 4 cut(s) 1108, 1282, 2257, 2557
NheI GCTAGC 1 cut(s) 589
NlaIV GGNNCC 1 cut(s) 2559
NmeAIII GCCGAG 1 cut(s) 201
NmuCI GTSAC 1 cut(s) 723
NsbI TGCGCA 1 cut(s) 482
NsiI ATGCAT 1 cut(s) 1957
NspI RCATGY 2 cut(s) 554, 1959
NspV TTCGAA 1 cut(s) 711
PaqCI CACCTGC 1 cut(s) 903
PceI AGGCCT 1 cut(s) 1943
PciI ACATGT 1 cut(s) 550
PcsI WCGNNNNNNNCGW 2 cut(s) 471, 2338
PctI GAATGC 1 cut(s) 1393
PfeI GAWTC 4 cut(s) 183, 1649, 1673, 1999
Pfl23II CGTACG 1 cut(s) 429
PflFI GACNNNGTC 1 cut(s) 356
PfoI TCCNGGA 1 cut(s) 1854
PleI GAGTC 6 cut(s) 347, 429, 770, 792, 1867, 2212
PpsI GAGTC 6 cut(s) 347, 429, 770, 792, 1867, 2212
PscI ACATGT 1 cut(s) 550
PshBI ATTAAT 1 cut(s) 837
Psp124BI GAGCTC 2 cut(s) 83, 150
Psp6I CCWGG 4 cut(s) 888, 1219, 1854, 2014
PspGI CCWGG 4 cut(s) 888, 1219, 1854, 2014
PspLI CGTACG 1 cut(s) 429
PspN4I GGNNCC 1 cut(s) 2559
PspPI GGNCC 6 cut(s) 6, 15, 1159, 1232, 1559, 2305
PstI CTGCAG 2 cut(s) 612, 2545
PstNI CAGNNNCTG 1 cut(s) 1064
PsuI RGATCY 2 cut(s) 1108, 2557
PsyI GACNNNGTC 1 cut(s) 356
RsaI GTAC 9 cut(s) 376, 431, 614, 671, 1050, 1416, 1656, 2013, 2331
RsaNI GTAC 9 cut(s) 375, 430, 613, 670, 1049, 1415, 1655, 2012, 2330
RseI CAYNNNNRTG 2 cut(s) 1908, 2253
SacI GAGCTC 2 cut(s) 83, 150
Sau3AI GATC 4 cut(s) 1108, 1282, 2257, 2557
Sau96I GGNCC 6 cut(s) 6, 15, 1159, 1232, 1559, 2305
SchI GAGTC 6 cut(s) 347, 430, 770, 793, 1868, 2213
ScrFI CCNGG 6 cut(s) 13, 890, 1221, 1856, 2016, 2061
SduI GDGCHC 2 cut(s) 83, 150
SfaNI GCATC 7 cut(s) 308, 594, 649, 1089, 2181, 2354, 2468
SfcI CTRYAG 3 cut(s) 608, 1596, 2541
SfuI TTCGAA 1 cut(s) 711
SgrAI CRCCGGYG 1 cut(s) 512
SinI GGWCC 1 cut(s) 1159
SmiMI CAYNNNNRTG 2 cut(s) 1908, 2253
SmlI CTYRAG 2 cut(s) 824, 2197
SmoI CTYRAG 2 cut(s) 824, 2197
SpeI ACTAGT 2 cut(s) 727, 1051
SseBI AGGCCT 1 cut(s) 1943
SspI AATATT 2 cut(s) 1212, 1459
SspMI CTAG 7 cut(s) 36, 590, 728, 1052, 1371, 1796, 2103
SstI GAGCTC 2 cut(s) 83, 150
StuI AGGCCT 1 cut(s) 1943
StyD4I CCNGG 6 cut(s) 11, 888, 1219, 1854, 2014, 2059
StyI CCWWGG 4 cut(s) 399, 1664, 2496, 2527
TaaI ACNGT 5 cut(s) 1597, 1770, 2142, 2220, 2411
TaiI ACGT 2 cut(s) 431, 679
TaqI TCGA 6 cut(s) 474, 711, 999, 1501, 1827, 2616
TaqII GACCGA 1 cut(s) 711
TatI WGTACW 2 cut(s) 1414, 1654
TauI GCSGC 5 cut(s) 35, 263, 390, 470, 688
TfiI GAWTC 4 cut(s) 183, 1649, 1673, 1999
TscAI CASTG 3 cut(s) 576, 1561, 1845
TseFI GTSAC 1 cut(s) 723
Tsp45I GTSAC 1 cut(s) 723
TspDTI ATGAA 8 cut(s) 771, 1044, 1452, 1513, 1713, 1986, 2187, 2612
TspGWI ACGGA 3 cut(s) 165, 346, 2459
TspRI CASTG 3 cut(s) 576, 1561, 1845
Tth111I GACNNNGTC 1 cut(s) 356
VpaK11BI GGWCC 1 cut(s) 1159
VspI ATTAAT 1 cut(s) 837
XagI CCTNNNNNAGG 2 cut(s) 1566, 1827
XapI RAATTY 6 cut(s) 622, 707, 948, 1357, 1472, 2483
XceI RCATGY 2 cut(s) 554, 1959
XspI CTAG 7 cut(s) 36, 590, 728, 1052, 1371, 1796, 2103
Zsp2I ATGCAT 1 cut(s) 1957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.