Rh1CG436100

ATPase domain of DNA mismatch repair MUTS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0015276
Physical Location & Seq
Forward (+)
69105718 .. 69111350
5633 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG436100.1

Sequence Viewer

Length: 2292 bp
ATGCTCTCTTCCGCCGCCGCCCTATTCGGCAACCCCATCTCCCTCACTCTCACTCCTCCTCCTCCTCCTCTCACTCTCTCTCTTCACTTCAAGAACCGCGCTTTCCTCACTCGCTTCTCAATCTCAGCCAACCATGACTCTACCAAGTCGCAGGTCCATTACGACAGTCTTAGGGTTTTGGAATGGGATAAGCTCTGCGATTCCGTCGCCGGCTTCGCCCGTACTCCGTTAGGCCGCGAAGCCACCAAGGCAAAGCTATGGTGTTTGAGCCAGACCTACGAAGAAAGCTTGAGGCTTCTGGACGAAACCAATGCCGCGGTTGAGATGCTCAAGCACGGCGCTTGCAATTTGGATTTTGGCGGTGTCAGAGTCGTTTTGGTGGAATCTGCTATACAACGTGCTCGGAGGAGCTCAGCGGTGGAAGGAATCGAAGCGGTAGCTGTGATGGAGCTGCTGCAGTACGCAGAGCATTTGCAGAGTAATCTGAAAGGTGCAATCAAGGAAGATGCGGAGTGGTACAGGCGATTTATGCCTCTTTCGGAAGTGATAATGGGATTTGTGGTAAACCGATCACTAGCTAAGCTGATACAGCAAGTTATAGATGAAGACGGCCATGTTAAAGACTCTGCGAGTCCAAACCTGAAACGTTTACGCAATCAAGTTCGGACGCTTGAGAAAAAGATATATCAGTTAATGGACAGCCTAGTCCGGAATGACAAGAGTGAAACACCACTTCTGGAAGTGAGTACCGTTGATGGAAGGTGGTGCATAAAATCCAGTGCTAATGAAATGACAAGTTTTAAGGGTCTACTGTTGCCCAGTGGTTCAGGCAAAGGAAGCATTGTTGAGCCATTATCTGCTGTCCCTCTGAATGATGAGTTACAACAAACAAGGGCACTAGTATCAGAGGCTGAGGCAGAGGTTCTCTCTATGTTAACAGAAAAGATGCAAATGGATCTTGAGAATATTGAACAGCTATTAAACAGTATTATTGAACTGGATGTGGTGAATGCCCGAGCAACTTATGGCCTAGCATATGGAGGAACATGTCCCAATATATTTCTCCCAGGAGCTCATCATCCTTTATTACTGCAACAGCATAGAAAAAATTTAAAGAAGGCCAGGAAGGATTCCAAGAATGTTACTCTGGTTCACCCAGTTCCAGTTGATTTTTTTATCTCACAGAAAACTCGAGTTTTGGTTTTCACTGGCCCTAATACAGGGGGAAAAACCATTGGCCTGAAGACTGTAGGATTAGCAGCTATGATGGCAAAATCAGGTCTTCATGTTTTATGTTCTGAGTCGGTACAAATCCCTTGGTTTGATTCAGTGTTTGCTGACATTGGTGATGAACAATCCCTGTCTCAATCTCTGTCCACCTTCTCGGGACACCTAAAACATATAAGCGACATACAATCGCAGTCAACAAGTTGTTCACTCGTGCTTCTAGATGAGGTCGGTGCGGGAACAAATCCTCTTGAAGGAGCAGCTCTGGGGATGTCACTATTGGAATCTTTTGCTGAAACTGGTGCTTTGTTGACGATTGCCACAACTCATCATGGTGAACTCAAAACCCTGAAATACAGCAATGATGCCTTTGAAAATGCATGTATGGAGTTTGATGAAGTGAACTTAAAGCCAACTTACAGAATTCTCTGGGGAGTACCAGGGCGTTCAAATGCGATCAATATAGCTGAAAGGTTAGGACTACCTGGTAAAGTAGTTGATAATGCCCGAGAACTATATGGTGCAGCTAGTGCAGGGATAGATGAGGTTATAGTTGATATGGAACGGTTAAAGCAGGAGTATCAAGAGCTTTTATATGAAGCACAGAATCATCTGACGATCTCAAGAGAGTTGCATGAGAAACTGTTGGTTGCCAAAAGGAAGATTATGGAACATGGTAATGATCAAAGATTTAGGCAAATGCGAGAAATATCTGAGGCTGCTGCAATGGCACGATCTATTCTTCACAAAAAAGCTCGAAAGCAACGCGAATCTGCAATTCAATCTCTGCAGCCTACTTTGGAGCGAAAAAGACAGTTTGCATTGGCAACAAAAACAACTGATAATGGTGAGAATTCAACCACAAAAAGAAGGGTATCCTCTTCTGAAGATGTTAAAAAATCGCCATCAGATAAGTTGGAGCTTCCCAAGGTTGGTAATATGGTGTTTGTTTCTTCGCTTGGAAAGAAGGCCACAGTTTTGAGAGTGGAGCCATCTAAGGAAGAAATTTTGGTTCAAGCTGGTAACATAAAGATGAAACTGAAACTAGGTGACATCAAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MutS_V

Protein Analysis

763

Amino Acids

84.38

Weight (kDa)

8.39

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MutS_V PF00488 401 - 581 1e-31 MutS domain V
MSSS PF20297 720 - 761 1.8e-10 MutS2 and Smr-associated SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G54090
fragaria_vesca FvH4_7g33260 FvH4_7g33260
malus_domestica MD07G1302400.v1.1
prunus_persica Prupe.2G321600_v2.0.a1
pyrus_communis pycom07g27570
rosa_chinensis RchiOBHm_Chr1g0383251
rosa_laevigata RLG00000026119
rosa_multiflora Rmu_sc0007173.1_g000024
rosa_roxburghii Rroxscaffold_4G00277470
rosa_rugosa Rorug01G0439800
rosa_samantha Rh1AG465500 Rh1BG422900 Rh1CG436100 Rh1DG455600
rosa_wichuraiana Rw1G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 704
Acc36I ACCTGC 1 cut(s) 142
AccI GTMKAC 1 cut(s) 808
AccII CGCG 4 cut(s) 99, 237, 317, 1995
AccIII TCCGGA 1 cut(s) 708
AclI AACGTT 1 cut(s) 646
AclWI GGATC 1 cut(s) 963
AcoI YGGCCR 1 cut(s) 610
AcsI RAATTY 4 cut(s) 1108, 1650, 2080, 2232
AcuI CTGAAG 2 cut(s) 1262, 2133
AfaI GTAC 6 cut(s) 223, 461, 518, 748, 1308, 1665
AfiI CCNNNNNNNGG 3 cut(s) 1220, 1481, 2159
AflIII ACRYGT 1 cut(s) 1046
AgsI TTSAA 9 cut(s) 91, 971, 995, 1481, 1601, 1677, 2009, 2085, 2243
AhlI ACTAGT 1 cut(s) 898
AjnI CCWGG 4 cut(s) 1066, 1121, 1666, 1711
Alw21I GWGCWC 3 cut(s) 403, 413, 1075
Alw26I GTCTC 1 cut(s) 1368
AlwI GGATC 1 cut(s) 963
AlwNI CAGNNNCTG 1 cut(s) 911
Ama87I CYCGRG 4 cut(s) 1014, 1191, 1384, 1734
Aor13HI TCCGGA 1 cut(s) 708
AoxI GGCC 7 cut(s) 232, 610, 1027, 1119, 1210, 1237, 2196
ApeKI GCWGC 8 cut(s) 451, 454, 1259, 1487, 1751, 1946, 1949, 2017
ApoI RAATTY 4 cut(s) 1108, 1650, 2080, 2232
AspLEI GCGC 2 cut(s) 101, 341
AspS9I GGNCC 2 cut(s) 154, 1211
AsuHPI GGTGA 6 cut(s) 1018, 1145, 1358, 1574, 2087, 2288
AvaI CYCGRG 4 cut(s) 1014, 1191, 1384, 1734
AvaII GGWCC 1 cut(s) 154
BaeGI GKGCMC 1 cut(s) 898
BanII GRGCYC 2 cut(s) 413, 1075
BauI CACGAG 1 cut(s) 1439
BbsI GAAGAC 3 cut(s) 612, 1250, 1274
Bbv12I GWGCWC 3 cut(s) 403, 413, 1075
BbvCI CCTCAGC 1 cut(s) 912
BbvI GCAGC 8 cut(s) 438, 441, 1271, 1499, 1763, 1933, 1936, 2029
BccI CCATC 6 cut(s) 44, 439, 749, 1261, 2140, 2227
BceAI ACGGC 2 cut(s) 352, 625
BcgI CGANNNNNNTGC 2 cut(s) 293, 327
BciT130I CCWGG 4 cut(s) 1068, 1123, 1668, 1713
BciVI GTATCC 1 cut(s) 2113
BclI TGATCA 1 cut(s) 1909
BcoDI GTCTC 1 cut(s) 1368
BcuI ACTAGT 1 cut(s) 898
BfaI CTAG 7 cut(s) 575, 704, 899, 1031, 1448, 1755, 2273
BfmI CTRYAG 3 cut(s) 455, 1248, 2015
BfoI RGCGCY 1 cut(s) 342
BfuAI ACCTGC 1 cut(s) 142
BfuI GTATCC 1 cut(s) 2113
BglI GCCNNNNNGGC 1 cut(s) 248
BlpI GCTNAGC 2 cut(s) 412, 579
Bme1390I CCNGG 4 cut(s) 1068, 1123, 1668, 1713
Bme18I GGWCC 1 cut(s) 154
BmeT110I CYCGRG 4 cut(s) 1014, 1191, 1384, 1734
BmgT120I GGNCC 2 cut(s) 154, 1211
BmiI GGNNCC 1 cut(s) 2217
BmrFI CCNGG 4 cut(s) 1068, 1123, 1668, 1713
BmrI ACTGGG 2 cut(s) 813, 1151
BmsI GCATC 4 cut(s) 315, 496, 936, 1582
BmuI ACTGGG 2 cut(s) 813, 1151
BpiI GAAGAC 3 cut(s) 612, 1250, 1274
BplI GAGNNNNNCTC 2 cut(s) 911, 943
Bpu10I CCTNAGC 1 cut(s) 912
Bpu1102I GCTNAGC 2 cut(s) 412, 579
BpuEI CTTGAG 5 cut(s) 310, 314, 692, 980, 1834
BsaJI CCNNGG 6 cut(s) 246, 315, 1066, 1316, 1667, 2154
BsaWI WCCGGW 1 cut(s) 708
BsaXI ACNNNNNCTCC 6 cut(s) 23, 37, 43, 53, 67, 73
Bsc4I CCNNNNNNNGG 3 cut(s) 1220, 1481, 2159
Bse118I RCCGGY 1 cut(s) 209
Bse1I ACTGG 7 cut(s) 777, 819, 1002, 1157, 1163, 1213, 1531
Bse3DI GCAATG 2 cut(s) 1594, 1959
BseAI TCCGGA 1 cut(s) 708
BseBI CCWGG 4 cut(s) 1068, 1123, 1668, 1713
BseDI CCNNGG 6 cut(s) 246, 315, 1066, 1316, 1667, 2154
BseGI GGATG 3 cut(s) 1006, 1078, 1503
BseLI CCNNNNNNNGG 3 cut(s) 1220, 1481, 2159
BseMI GCAATG 2 cut(s) 1594, 1959
BseMII CTCAG 5 cut(s) 138, 426, 903, 1290, 1932
BseNI ACTGG 7 cut(s) 777, 819, 1002, 1157, 1163, 1213, 1531
BseRI GAGGAG 6 cut(s) 45, 48, 51, 54, 57, 421
BseSI GKGCMC 1 cut(s) 898
BseXI GCAGC 8 cut(s) 438, 441, 1271, 1499, 1763, 1933, 1936, 2029
BsgI GTGCAG 2 cut(s) 1770, 1779
Bsh1236I CGCG 4 cut(s) 99, 237, 317, 1995
BshFI GGCC 7 cut(s) 234, 612, 1029, 1121, 1212, 1239, 2198
BsiHKAI GWGCWC 3 cut(s) 403, 413, 1075
BsiHKCI CYCGRG 4 cut(s) 1014, 1191, 1384, 1734
BsiSI CCGG 2 cut(s) 210, 709
BslFI GGGAC 3 cut(s) 848, 1035, 1401
BslI CCNNNNNNNGG 3 cut(s) 1220, 1481, 2159
BsmAI GTCTC 1 cut(s) 1368
BsmFI GGGAC 3 cut(s) 848, 1035, 1401
BsmI GAATGC 1 cut(s) 1015
BsnI GGCC 7 cut(s) 234, 612, 1029, 1121, 1212, 1239, 2198
BsoBI CYCGRG 4 cut(s) 1014, 1191, 1384, 1734
Bsp1286I GDGCHC 4 cut(s) 403, 413, 898, 1075
Bsp13I TCCGGA 1 cut(s) 708
Bsp143I GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
Bsp1720I GCTNAGC 2 cut(s) 412, 579
BspANI GGCC 7 cut(s) 234, 612, 1029, 1121, 1212, 1239, 2198
BspCNI CTCAG 5 cut(s) 137, 425, 904, 1291, 1933
BspEI TCCGGA 1 cut(s) 708
BspFNI CGCG 4 cut(s) 99, 237, 317, 1995
BspLI GGNNCC 1 cut(s) 2217
BspMAI CTGCAG 2 cut(s) 459, 2019
BspMI ACCTGC 1 cut(s) 142
BspPI GGATC 1 cut(s) 963
BsrDI GCAATG 2 cut(s) 1594, 1959
BsrFI RCCGGY 1 cut(s) 209
BsrI ACTGG 7 cut(s) 777, 819, 1002, 1157, 1163, 1213, 1531
BssAI RCCGGY 1 cut(s) 209
BssECI CCNNGG 6 cut(s) 246, 315, 1066, 1316, 1667, 2154
BssMI GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
BssSI CACGAG 1 cut(s) 1439
BssT1I CCWWGG 3 cut(s) 246, 1316, 2154
Bst2BI CACGAG 1 cut(s) 1439
Bst2UI CCWGG 4 cut(s) 1068, 1123, 1668, 1713
Bst4CI ACNGT 9 cut(s) 167, 751, 813, 986, 1249, 1794, 1872, 2043, 2203
Bst6I CTCTTC 3 cut(s) 13, 87, 2113
BstAPI GCANNNNNTGC 1 cut(s) 1757
BstC8I GCNNGC 2 cut(s) 211, 343
BstDEI CTNAG 8 cut(s) 124, 170, 412, 579, 912, 1299, 1941, 2223
BstDSI CCRYGG 1 cut(s) 315
BstENI CCTNNNNNAGG 2 cut(s) 1218, 1479
BstF5I GGATG 3 cut(s) 1006, 1078, 1503
BstFNI CGCG 4 cut(s) 99, 237, 317, 1995
BstH2I RGCGCY 1 cut(s) 342
BstHHI GCGC 2 cut(s) 101, 341
BstKTI GATC 6 cut(s) 572, 958, 1686, 1848, 1912, 1964
BstMAI GTCTC 1 cut(s) 1368
BstMBI GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
BstMWI GCNNNNNNNGC 8 cut(s) 215, 248, 529, 589, 837, 1268, 1757, 1955
BstNI CCWGG 4 cut(s) 1068, 1123, 1668, 1713
BstNSI RCATGY 2 cut(s) 1050, 1611
BstSCI CCNGG 4 cut(s) 1066, 1121, 1666, 1711
BstSFI CTRYAG 3 cut(s) 455, 1248, 2015
BstSLI GKGCMC 1 cut(s) 898
BstUI CGCG 4 cut(s) 99, 237, 317, 1995
BstV1I GCAGC 8 cut(s) 438, 441, 1271, 1499, 1763, 1933, 1936, 2029
BstV2I GAAGAC 3 cut(s) 612, 1250, 1274
BstX2I RGATCY 1 cut(s) 955
BstYI RGATCY 1 cut(s) 955
BsuI GTATCC 1 cut(s) 2113
BsuRI GGCC 7 cut(s) 234, 612, 1029, 1121, 1212, 1239, 2198
BtgI CCRYGG 1 cut(s) 315
BtsCI GGATG 3 cut(s) 1006, 1078, 1503
BtsIMutI CAGTG 4 cut(s) 784, 826, 1206, 1335
BveI ACCTGC 1 cut(s) 142
Cac8I GCNNGC 2 cut(s) 211, 343
CaiI CAGNNNCTG 1 cut(s) 911
CfoI GCGC 2 cut(s) 101, 341
Cfr10I RCCGGY 1 cut(s) 209
Cfr13I GGNCC 2 cut(s) 154, 1211
Cfr42I CCGCGG 1 cut(s) 318
CseI GACGC 1 cut(s) 676
CsiI ACCWGGT 1 cut(s) 1711
Csp6I GTAC 6 cut(s) 222, 460, 517, 747, 1307, 1664
CviAII CATG 8 cut(s) 134, 614, 1047, 1286, 1559, 1608, 1862, 1901
CviQI GTAC 6 cut(s) 222, 460, 517, 747, 1307, 1664
DdeI CTNAG 8 cut(s) 124, 170, 412, 579, 912, 1299, 1941, 2223
DpnI GATC 6 cut(s) 571, 957, 1685, 1847, 1911, 1963
DpnII GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
DraI TTTAAA 1 cut(s) 1113
DrdI GACNNNNNNGTC 1 cut(s) 704
DseDI GACNNNNNNGTC 1 cut(s) 704
EaeI YGGCCR 1 cut(s) 610
Eam1104I CTCTTC 3 cut(s) 13, 87, 2113
EarI CTCTTC 3 cut(s) 13, 87, 2113
Ecl136II GAGCTC 2 cut(s) 411, 1073
Eco130I CCWWGG 3 cut(s) 246, 1316, 2154
Eco24I GRGCYC 2 cut(s) 413, 1075
Eco47I GGWCC 1 cut(s) 154
Eco53kI GAGCTC 2 cut(s) 411, 1073
Eco57I CTGAAG 2 cut(s) 1262, 2133
Eco88I CYCGRG 4 cut(s) 1014, 1191, 1384, 1734
EcoICRI GAGCTC 2 cut(s) 411, 1073
EcoNI CCTNNNNNAGG 2 cut(s) 1218, 1479
EcoRI GAATTC 2 cut(s) 1650, 2080
EcoRII CCWGG 4 cut(s) 1066, 1121, 1666, 1711
EcoT14I CCWWGG 3 cut(s) 246, 1316, 2154
EcoT22I ATGCAT 1 cut(s) 1609
EcoT38I GRGCYC 2 cut(s) 413, 1075
ErhI CCWWGG 3 cut(s) 246, 1316, 2154
FaeI CATG 8 cut(s) 137, 617, 1050, 1289, 1562, 1611, 1865, 1904
FaqI GGGAC 3 cut(s) 848, 1035, 1401
FatI CATG 8 cut(s) 133, 613, 1046, 1285, 1558, 1607, 1861, 1900
FauI CCCGC 1 cut(s) 1456
FauNDI CATATG 1 cut(s) 1036
FbaI TGATCA 1 cut(s) 1909
FblI GTMKAC 1 cut(s) 808
FokI GGATG 3 cut(s) 1013, 1065, 1510
FriOI GRGCYC 2 cut(s) 413, 1075
FspBI CTAG 7 cut(s) 575, 704, 899, 1031, 1448, 1755, 2273
GlaI GCGC 2 cut(s) 100, 340
HaeII RGCGCY 1 cut(s) 342
HaeIII GGCC 7 cut(s) 234, 612, 1029, 1121, 1212, 1239, 2198
HapII CCGG 2 cut(s) 210, 709
HgaI GACGC 1 cut(s) 676
HhaI GCGC 2 cut(s) 101, 341
Hin1II CATG 8 cut(s) 137, 617, 1050, 1289, 1562, 1611, 1865, 1904
Hin6I GCGC 2 cut(s) 99, 339
HinP1I GCGC 2 cut(s) 99, 339
HincII GTYRAC 3 cut(s) 936, 1425, 1539
HindII GTYRAC 3 cut(s) 936, 1425, 1539
HindIII AAGCTT 1 cut(s) 286
HpaI GTTAAC 1 cut(s) 936
HpaII CCGG 2 cut(s) 210, 709
HphI GGTGA 6 cut(s) 1018, 1145, 1358, 1574, 2087, 2288
Hpy99I CGWCG 1 cut(s) 209
HpyAV CCTTC 8 cut(s) 416, 753, 1111, 1120, 1390, 1475, 2091, 2188
HpyCH4III ACNGT 9 cut(s) 167, 751, 813, 986, 1249, 1794, 1872, 2043, 2203
HpyCH4IV ACGT 2 cut(s) 397, 646
HpyF10VI GCNNNNNNNGC 8 cut(s) 215, 248, 529, 589, 837, 1268, 1757, 1955
HpyF3I CTNAG 8 cut(s) 124, 170, 412, 579, 912, 1299, 1941, 2223
HpySE526I ACGT 2 cut(s) 397, 646
Hsp92II CATG 8 cut(s) 137, 617, 1050, 1289, 1562, 1611, 1865, 1904
HspAI GCGC 2 cut(s) 99, 339
Kpn2I TCCGGA 1 cut(s) 708
KroI GCCGGC 1 cut(s) 209
KroNI GCCGGC 1 cut(s) 211
Ksp22I TGATCA 1 cut(s) 1909
KspAI GTTAAC 1 cut(s) 936
KspI CCGCGG 1 cut(s) 318
Kzo9I GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
LmnI GCTCC 7 cut(s) 408, 448, 1070, 1484, 2029, 2146, 2215
Lsp1109I GCAGC 8 cut(s) 438, 441, 1271, 1499, 1763, 1933, 1936, 2029
LweI GCATC 4 cut(s) 315, 496, 936, 1582
MabI ACCWGGT 1 cut(s) 1711
MaeI CTAG 7 cut(s) 575, 704, 899, 1031, 1448, 1755, 2273
MaeII ACGT 2 cut(s) 397, 646
MaeIII GTNAC 5 cut(s) 879, 1141, 1500, 2249, 2276
MalI GATC 6 cut(s) 571, 957, 1685, 1847, 1911, 1963
MboI GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
MflI RGATCY 1 cut(s) 955
MhlI GDGCHC 4 cut(s) 403, 413, 898, 1075
MluCI AATT 6 cut(s) 346, 1108, 1650, 2004, 2080, 2232
MlyI GAGTC 5 cut(s) 131, 378, 617, 640, 1310
MmeI TCCRAC 1 cut(s) 2124
Mph1103I ATGCAT 1 cut(s) 1609
MroI TCCGGA 1 cut(s) 708
MroNI GCCGGC 1 cut(s) 209
MseI TTAA 9 cut(s) 618, 692, 801, 935, 980, 1112, 1634, 1796, 2121
MslI CAYNNNNRTG 3 cut(s) 1560, 1905, 2258
MspA1I CMGCKG 2 cut(s) 317, 416
MspI CCGG 2 cut(s) 210, 709
MspR9I CCNGG 4 cut(s) 1068, 1123, 1668, 1713
Mva1269I GAATGC 1 cut(s) 1015
MvaI CCWGG 4 cut(s) 1068, 1123, 1668, 1713
MvnI CGCG 4 cut(s) 99, 237, 317, 1995
MwoI GCNNNNNNNGC 8 cut(s) 215, 248, 529, 589, 837, 1268, 1757, 1955
NaeI GCCGGC 1 cut(s) 211
NdeI CATATG 1 cut(s) 1036
NdeII GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
NgoMIV GCCGGC 1 cut(s) 209
NlaIII CATG 8 cut(s) 137, 617, 1050, 1289, 1562, 1611, 1865, 1904
NlaIV GGNNCC 1 cut(s) 2217
NmuCI GTSAC 2 cut(s) 1500, 2276
NsiI ATGCAT 1 cut(s) 1609
NspI RCATGY 2 cut(s) 1050, 1611
PaeR7I CTCGAG 1 cut(s) 1191
PciI ACATGT 1 cut(s) 1046
PctI GAATGC 1 cut(s) 1015
PdiI GCCGGC 1 cut(s) 211
PfeI GAWTC 8 cut(s) 200, 383, 426, 1130, 1325, 1511, 1834, 1997
PleI GAGTC 5 cut(s) 131, 377, 617, 639, 1309
PpsI GAGTC 5 cut(s) 131, 377, 617, 639, 1309
PscI ACATGT 1 cut(s) 1046
Psp124BI GAGCTC 2 cut(s) 413, 1075
Psp1406I AACGTT 1 cut(s) 646
Psp6I CCWGG 4 cut(s) 1066, 1121, 1666, 1711
PspGI CCWGG 4 cut(s) 1066, 1121, 1666, 1711
PspN4I GGNNCC 1 cut(s) 2217
PspPI GGNCC 2 cut(s) 154, 1211
PspXI VCTCGAGB 1 cut(s) 1191
PstI CTGCAG 2 cut(s) 459, 2019
PstNI CAGNNNCTG 1 cut(s) 911
PsuI RGATCY 1 cut(s) 955
RsaI GTAC 6 cut(s) 223, 461, 518, 748, 1308, 1665
RsaNI GTAC 6 cut(s) 222, 460, 517, 747, 1307, 1664
RseI CAYNNNNRTG 3 cut(s) 1560, 1905, 2258
SacI GAGCTC 2 cut(s) 413, 1075
SacII CCGCGG 1 cut(s) 318
SaqAI TTAA 9 cut(s) 618, 692, 801, 935, 980, 1112, 1634, 1796, 2121
Sau3AI GATC 6 cut(s) 569, 955, 1683, 1845, 1909, 1961
Sau96I GGNCC 2 cut(s) 154, 1211
SchI GAGTC 5 cut(s) 131, 378, 617, 640, 1310
ScrFI CCNGG 4 cut(s) 1068, 1123, 1668, 1713
SduI GDGCHC 4 cut(s) 403, 413, 898, 1075
SexAI ACCWGGT 1 cut(s) 1711
SfaNI GCATC 4 cut(s) 315, 496, 936, 1582
SfcI CTRYAG 3 cut(s) 455, 1248, 2015
Sfr274I CTCGAG 1 cut(s) 1191
Sfr303I CCGCGG 1 cut(s) 318
SgrBI CCGCGG 1 cut(s) 318
SinI GGWCC 1 cut(s) 154
SlaI CTCGAG 1 cut(s) 1191
SmiMI CAYNNNNRTG 3 cut(s) 1560, 1905, 2258
SmlI CTYRAG 6 cut(s) 289, 329, 671, 959, 1191, 1849
SmoI CTYRAG 6 cut(s) 289, 329, 671, 959, 1191, 1849
SpeI ACTAGT 1 cut(s) 898
Sse9I AATT 6 cut(s) 346, 1108, 1650, 2004, 2080, 2232
SspI AATATT 1 cut(s) 967
SspMI CTAG 7 cut(s) 575, 704, 899, 1031, 1448, 1755, 2273
SstI GAGCTC 2 cut(s) 413, 1075
StyD4I CCNGG 4 cut(s) 1066, 1121, 1666, 1711
StyI CCWWGG 3 cut(s) 246, 1316, 2154
TaaI ACNGT 9 cut(s) 167, 751, 813, 986, 1249, 1794, 1872, 2043, 2203
TaiI ACGT 2 cut(s) 400, 649
TaqI TCGA 3 cut(s) 429, 1192, 1984
TasI AATT 6 cut(s) 346, 1108, 1650, 2004, 2080, 2232
TauI GCSGC 4 cut(s) 17, 20, 237, 317
TfiI GAWTC 8 cut(s) 200, 383, 426, 1130, 1325, 1511, 1834, 1997
Tru1I TTAA 9 cut(s) 618, 692, 801, 935, 980, 1112, 1634, 1796, 2121
Tru9I TTAA 9 cut(s) 618, 692, 801, 935, 980, 1112, 1634, 1796, 2121
TscAI CASTG 4 cut(s) 784, 826, 1213, 1335
TseFI GTSAC 2 cut(s) 1500, 2276
TseI GCWGC 8 cut(s) 451, 454, 1259, 1487, 1751, 1946, 1949, 2017
Tsp45I GTSAC 2 cut(s) 1500, 2276
TspDTI ATGAA 7 cut(s) 618, 801, 1274, 1365, 1638, 1839, 2276
TspGWI ACGGA 2 cut(s) 193, 216
TspRI CASTG 4 cut(s) 784, 826, 1213, 1335
VpaK11BI GGWCC 1 cut(s) 154
XagI CCTNNNNNAGG 2 cut(s) 1218, 1479
XapI RAATTY 4 cut(s) 1108, 1650, 2080, 2232
XbaI TCTAGA 1 cut(s) 1447
XceI RCATGY 2 cut(s) 1050, 1611
XhoI CTCGAG 1 cut(s) 1191
XmiI GTMKAC 1 cut(s) 808
XspI CTAG 7 cut(s) 575, 704, 899, 1031, 1448, 1755, 2273
Zsp2I ATGCAT 1 cut(s) 1609
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.