RLG00000026119

ATPase domain of DNA mismatch repair MUTS family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0015276
Physical Location & Seq
Reverse (-)
647561 .. 653238
5678 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026119

Sequence Viewer

Length: 2388 bp
ATGCTCTCCTCCGCCGCCGCCCTATTCGGCAACCCCATCTCCCTCACTCTCATTCCTCCTCCTCCTCTCACTCTCTCTCTTCACTTCAAGAACCGCGCTTTCCTCACTCGCTTCTCAATCTCAGCCAACCATGACTCTACCAAGTCGCAGGTCCATTACGACAGTCTTAGGGTTTTGGAATGGGATAAGCTCTGCGATTCCGTCGCCGGCTTCGCTCGTACTCCGTTAGGCCGCGAAGCCACCAAGGCAAAGCTATGGTGTTTGAGCCAGACTTACGAAGAAAGCTTGAGGCTTCTGGACGAAACCAATGCCGCGGTTGAGATGCTCAAGCACGGCGCTTGCAATTTGGATTTTGGCGGTGTCAAAGTCGTTTTGGTGGAATCTGCTATACAACGTGCTCGGAGGAGCTCAGCGGTGGAAGGAATCGAAGCGGTAGCTGTGATGGAGCTGCTGCAGTACGTAGAGCATTTGCAGAGTAATCTGAAAGGTGCAATCAAGGAAGATGCGGAGTGGTACAGGCGATTTATGCCTCTTTCGGAAGTGATAATGGGATTTGTGGTAAACCGATCACTAGCTAAGCTGATACAGCAAGTTATAGATGAAGACGGCCGTGTTAAAGACTCTGCGAGTCCAAACCTGAAACGTTTACGCAATCAAGTTCGGACGCTTGAGAAAAAGATATATCAGTTAATGGACAGCCTAGTCCGTAATGACAAGAGTGAAACACCAGTTTTGGAAGTGAGTACTGTTGATGGAAGGTGGTGCATAAAATCCAGTGCTAATGAAATGACAAGTTTTAAGGGTCTACTGTTGCCCAGTGGTTCAGGCAAAGGAAGCATTGTTGAGCCATTATCTGCTGTCCCTCTGAATGATGAGTTACAACAAACAAGGGCACTAGTATCAGAGGCTGAGGCAGAGGTTCTCTCTATGTTAACAGAAAAGATGCAAATGGATCTTGAGAATATTGAACAGCTATTAAACAGTATTATTGAACTGGATGTGGTGAATGCCCGAGCAACTTATGGCCTAGCATATGGAGGAAAATGTCCCAATATATTTCTCCCAGGAGGTCATAGTTCTTCTGTTAGTGATGCCTACTTTTCAGGGAACAAACATCCACAGGCATCCTATTCCAAAAAAAGTGAATGGGTGTTGTATATGCCGAAAGCTCATCATCCTTTATTACTGCAACAGCATAGAAAAAATTTAAAGAAGGCCAGGAAGGATTCCGAGAATGTTACTCTGGTTCACCCAGCTCCAGTTGATTTTTTTATCTCACAGAAAACTCGAGTTTTGGTTATCACTGGCCCTAATACAGGGGGAAAAACCATTGGCCTGAAGACTGTAGGATTAGCAGCTATGATGGCAAAATCAGGTCTTCATGTTTTATGTTCTGAGTCGGTACAAATCCCTTGGTTTGATTCAGTGTTTGCTGACATTGGTGATGAACAATCCCTCTGTCAATCTCTGTCCACCTTCTCGGGCCACCTAAAACATATAAGCGACATACAATCGCAGTCAACAAGTTGTTCACTCGTGCTACTAGATGAGGTTGGTGCGGGAACAAATCCCCTTGAAGGAGCAGCGCTGGGGATGTCACTATTGGAATCTTTTGCTGAAACTGGTGCTTTGTTGACAATTGGCACAACACATCATGGTGAACTCAAAACCCTGAAATACAGCAATGACGCCTTTGAAAATGCATGTATGGAGTTTGATGAAGTGAACTTAAAGCCAACTTACAGAATTCTCTGGGGAGTACCAGGGCGTTCAAATGCGATCAATATAGCTGAAAGGTTAGGACTACCTCGTAAAGTAGTTGATAATGTCCGAGAACTATATGGTGCAGCTAGTGCAGGGATAGATGAGGTTATAGTTGAAATGGAACGGTTAAAGCAGGAGTATCAAGAGCTTTTATATGAAGCACAGAATCATCTGATGATCTCAAGAGAGTTGCATGAGAAACTGTTGGTTGCCAAAAGGAAGATTATGGAACATGGTAATGATCAAAGATTTAGGCAAATGCGAGAAATATCTGAGGCTGCTGCAATGGCACGATCTATTCTTCACAAAAAAGCGCAGAAGCAACGCAAATCTGCAATTCAATCTCTGCAGCCTACTTTGGAGAAAAAAAGACAGCTTGCATTGGCAACAAAAACAACTGATAATGGTGAGAATTCAACCACAAAGAGAAGGGTATCCTCTTCTGAAGATGTCAAAAAATCGCCATCAGATAAGTTTGAGCTTCCCAAGGTTGGCAATATGGTGTTTGTTTCTTCGCTTGGAAAGAAGGCGACAGTTTTGAGAGTGGAGCCATCTAAGGAAGAAATTTTAGTTCAAGCTGGTAACATAAAGATGAAACTGAAACTAGGGGACATCAAGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MutS_V

Protein Analysis

796

Amino Acids

88.07

Weight (kDa)

8.74

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MutS_V PF00488 432 - 613 2.3e-31 MutS domain V
MSSS PF20297 752 - 793 1.9e-10 MutS2 and Smr-associated SH3 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0015276)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G54090
fragaria_vesca FvH4_7g33260 FvH4_7g33260
malus_domestica MD07G1302400.v1.1
prunus_persica Prupe.2G321600_v2.0.a1
pyrus_communis pycom07g27570
rosa_chinensis RchiOBHm_Chr1g0383251
rosa_laevigata RLG00000026119
rosa_multiflora Rmu_sc0007173.1_g000024
rosa_roxburghii Rroxscaffold_4G00277470
rosa_rugosa Rorug01G0439800
rosa_samantha Rh1AG465500 Rh1BG422900 Rh1CG436100 Rh1DG455600
rosa_wichuraiana Rw1G040690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 701
Acc36I ACCTGC 1 cut(s) 139
AccI GTMKAC 1 cut(s) 805
AccII CGCG 3 cut(s) 96, 234, 314
AclI AACGTT 1 cut(s) 643
AclWI GGATC 1 cut(s) 960
AcoI YGGCCR 1 cut(s) 607
AcsI RAATTY 4 cut(s) 1204, 1746, 2176, 2328
AcuI CTGAAG 2 cut(s) 1358, 2229
AcyI GRCGYC 1 cut(s) 1689
AfaI GTAC 6 cut(s) 220, 458, 515, 745, 1404, 1761
AfeI AGCGCT 1 cut(s) 1587
AfiI CCNNNNNNNGG 3 cut(s) 1316, 1577, 2255
AhlI ACTAGT 1 cut(s) 895
AjnI CCWGG 3 cut(s) 1063, 1217, 1762
Alw21I GWGCWC 2 cut(s) 400, 410
AlwI GGATC 1 cut(s) 960
AlwNI CAGNNNCTG 1 cut(s) 908
Ama87I CYCGRG 3 cut(s) 1011, 1287, 1480
Aor51HI AGCGCT 1 cut(s) 1587
AoxI GGCC 7 cut(s) 229, 607, 1024, 1215, 1306, 1333, 1483
ApeKI GCWGC 8 cut(s) 448, 451, 1355, 1583, 1847, 2042, 2045, 2113
ApoI RAATTY 4 cut(s) 1204, 1746, 2176, 2328
AspLEI GCGC 4 cut(s) 98, 338, 1588, 2080
AspS9I GGNCC 3 cut(s) 151, 1307, 1483
AsuHPI GGTGA 5 cut(s) 1015, 1241, 1454, 1670, 2183
AvaI CYCGRG 3 cut(s) 1011, 1287, 1480
AvaII GGWCC 1 cut(s) 151
BaeGI GKGCMC 1 cut(s) 895
BanII GRGCYC 1 cut(s) 410
BauI CACGAG 1 cut(s) 1535
BbsI GAAGAC 3 cut(s) 609, 1346, 1370
Bbv12I GWGCWC 2 cut(s) 400, 410
BbvCI CCTCAGC 1 cut(s) 909
BbvI GCAGC 8 cut(s) 435, 438, 1367, 1595, 1859, 2029, 2032, 2125
BccI CCATC 6 cut(s) 44, 436, 746, 1357, 2236, 2323
BceAI ACGGC 3 cut(s) 349, 594, 622
BcgI CGANNNNNNTGC 2 cut(s) 290, 324
BciT130I CCWGG 3 cut(s) 1065, 1219, 1764
BciVI GTATCC 1 cut(s) 2209
BclI TGATCA 1 cut(s) 2005
BcuI ACTAGT 1 cut(s) 895
BfaI CTAG 7 cut(s) 572, 701, 896, 1028, 1544, 1851, 2369
BfmI CTRYAG 3 cut(s) 452, 1344, 2111
BfoI RGCGCY 2 cut(s) 339, 1589
BfuAI ACCTGC 1 cut(s) 139
BfuI GTATCC 1 cut(s) 2209
BglI GCCNNNNNGGC 1 cut(s) 245
BlpI GCTNAGC 2 cut(s) 409, 576
BmcAI AGTACT 1 cut(s) 745
Bme1390I CCNGG 3 cut(s) 1065, 1219, 1764
Bme18I GGWCC 1 cut(s) 151
BmeT110I CYCGRG 3 cut(s) 1011, 1287, 1480
BmgT120I GGNCC 3 cut(s) 151, 1307, 1483
BmiI GGNNCC 1 cut(s) 2313
BmrFI CCNGG 3 cut(s) 1065, 1219, 1764
BmrI ACTGGG 1 cut(s) 810
BmsI GCATC 5 cut(s) 312, 493, 933, 1081, 1133
BmuI ACTGGG 1 cut(s) 810
BpiI GAAGAC 3 cut(s) 609, 1346, 1370
BplI GAGNNNNNCTC 2 cut(s) 908, 940
BpmI CTGGAG 1 cut(s) 1242
Bpu10I CCTNAGC 1 cut(s) 909
Bpu1102I GCTNAGC 2 cut(s) 409, 576
BpuEI CTTGAG 5 cut(s) 307, 311, 689, 977, 1930
BsaAI YACGTR 1 cut(s) 460
BsaHI GRCGYC 1 cut(s) 1689
BsaJI CCNNGG 6 cut(s) 243, 312, 1063, 1412, 1763, 2250
BsaXI ACNNNNNCTCC 2 cut(s) 23, 53
Bsc4I CCNNNNNNNGG 3 cut(s) 1316, 1577, 2255
Bse118I RCCGGY 1 cut(s) 206
Bse1I ACTGG 7 cut(s) 728, 774, 816, 999, 1259, 1309, 1627
Bse3DI GCAATG 2 cut(s) 1690, 2055
BseBI CCWGG 3 cut(s) 1065, 1219, 1764
BseDI CCNNGG 6 cut(s) 243, 312, 1063, 1412, 1763, 2250
BseGI GGATG 5 cut(s) 1003, 1114, 1124, 1174, 1599
BseLI CCNNNNNNNGG 3 cut(s) 1316, 1577, 2255
BseMI GCAATG 2 cut(s) 1690, 2055
BseMII CTCAG 5 cut(s) 135, 423, 900, 1386, 2028
BseNI ACTGG 7 cut(s) 728, 774, 816, 999, 1259, 1309, 1627
BseRI GAGGAG 4 cut(s) 48, 51, 54, 418
BseSI GKGCMC 1 cut(s) 895
BseX3I CGGCCG 1 cut(s) 607
BseXI GCAGC 8 cut(s) 435, 438, 1367, 1595, 1859, 2029, 2032, 2125
BseYI CCCAGC 2 cut(s) 1252, 1588
BsgI GTGCAG 2 cut(s) 1866, 1875
Bsh1236I CGCG 3 cut(s) 96, 234, 314
Bsh1285I CGRYCG 1 cut(s) 610
BshFI GGCC 7 cut(s) 231, 609, 1026, 1217, 1308, 1335, 1485
BsiEI CGRYCG 1 cut(s) 610
BsiHKAI GWGCWC 2 cut(s) 400, 410
BsiHKCI CYCGRG 3 cut(s) 1011, 1287, 1480
BsiSI CCGG 1 cut(s) 207
BslFI GGGAC 2 cut(s) 845, 1032
BslI CCNNNNNNNGG 3 cut(s) 1316, 1577, 2255
BsmFI GGGAC 2 cut(s) 845, 1032
BsmI GAATGC 1 cut(s) 1012
BsnI GGCC 7 cut(s) 231, 609, 1026, 1217, 1308, 1335, 1485
BsoBI CYCGRG 3 cut(s) 1011, 1287, 1480
Bsp1286I GDGCHC 3 cut(s) 400, 410, 895
Bsp143I GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
Bsp1720I GCTNAGC 2 cut(s) 409, 576
BspANI GGCC 7 cut(s) 231, 609, 1026, 1217, 1308, 1335, 1485
BspCNI CTCAG 5 cut(s) 134, 422, 901, 1387, 2029
BspFNI CGCG 3 cut(s) 96, 234, 314
BspLI GGNNCC 1 cut(s) 2313
BspMAI CTGCAG 2 cut(s) 456, 2115
BspMI ACCTGC 1 cut(s) 139
BspPI GGATC 1 cut(s) 960
BsrDI GCAATG 2 cut(s) 1690, 2055
BsrFI RCCGGY 1 cut(s) 206
BsrI ACTGG 7 cut(s) 728, 774, 816, 999, 1259, 1309, 1627
BssAI RCCGGY 1 cut(s) 206
BssECI CCNNGG 6 cut(s) 243, 312, 1063, 1412, 1763, 2250
BssMI GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
BssNI GRCGYC 1 cut(s) 1689
BssSI CACGAG 1 cut(s) 1535
BssT1I CCWWGG 3 cut(s) 243, 1412, 2250
Bst2BI CACGAG 1 cut(s) 1535
Bst2UI CCWGG 3 cut(s) 1065, 1219, 1764
Bst4CI ACNGT 8 cut(s) 164, 748, 810, 983, 1345, 1890, 1968, 2299
Bst6I CTCTTC 2 cut(s) 84, 2209
BstACI GRCGYC 1 cut(s) 1689
BstAPI GCANNNNNTGC 1 cut(s) 1853
BstBAI YACGTR 1 cut(s) 460
BstC8I GCNNGC 3 cut(s) 208, 340, 2142
BstDEI CTNAG 8 cut(s) 121, 167, 409, 576, 909, 1395, 2037, 2319
BstDSI CCRYGG 1 cut(s) 312
BstENI CCTNNNNNAGG 1 cut(s) 1314
BstF5I GGATG 5 cut(s) 1003, 1114, 1124, 1174, 1599
BstFNI CGCG 3 cut(s) 96, 234, 314
BstH2I RGCGCY 2 cut(s) 339, 1589
BstHHI GCGC 4 cut(s) 98, 338, 1588, 2080
BstKTI GATC 6 cut(s) 569, 955, 1782, 1944, 2008, 2060
BstMBI GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
BstMCI CGRYCG 1 cut(s) 610
BstMWI GCNNNNNNNGC 8 cut(s) 212, 245, 526, 586, 834, 1364, 1853, 2051
BstNI CCWGG 3 cut(s) 1065, 1219, 1764
BstNSI RCATGY 1 cut(s) 1707
BstSCI CCNGG 3 cut(s) 1063, 1217, 1762
BstSFI CTRYAG 3 cut(s) 452, 1344, 2111
BstSLI GKGCMC 1 cut(s) 895
BstSNI TACGTA 1 cut(s) 460
BstUI CGCG 3 cut(s) 96, 234, 314
BstV1I GCAGC 8 cut(s) 435, 438, 1367, 1595, 1859, 2029, 2032, 2125
BstV2I GAAGAC 3 cut(s) 609, 1346, 1370
BstX2I RGATCY 1 cut(s) 952
BstYI RGATCY 1 cut(s) 952
BstZI CGGCCG 1 cut(s) 607
BsuI GTATCC 1 cut(s) 2209
BsuRI GGCC 7 cut(s) 231, 609, 1026, 1217, 1308, 1335, 1485
BtgI CCRYGG 1 cut(s) 312
BtsCI GGATG 5 cut(s) 1003, 1114, 1124, 1174, 1599
BtsIMutI CAGTG 4 cut(s) 781, 823, 1302, 1431
BveI ACCTGC 1 cut(s) 139
Cac8I GCNNGC 3 cut(s) 208, 340, 2142
CaiI CAGNNNCTG 1 cut(s) 908
CfoI GCGC 4 cut(s) 98, 338, 1588, 2080
Cfr10I RCCGGY 1 cut(s) 206
Cfr13I GGNCC 3 cut(s) 151, 1307, 1483
Cfr42I CCGCGG 1 cut(s) 315
CseI GACGC 2 cut(s) 673, 1697
Csp6I GTAC 6 cut(s) 219, 457, 514, 744, 1403, 1760
CviAII CATG 6 cut(s) 131, 1382, 1655, 1704, 1958, 1997
CviQI GTAC 6 cut(s) 219, 457, 514, 744, 1403, 1760
DdeI CTNAG 8 cut(s) 121, 167, 409, 576, 909, 1395, 2037, 2319
DpnI GATC 6 cut(s) 568, 954, 1781, 1943, 2007, 2059
DpnII GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
DraI TTTAAA 1 cut(s) 1209
DrdI GACNNNNNNGTC 1 cut(s) 701
DseDI GACNNNNNNGTC 1 cut(s) 701
EaeI YGGCCR 1 cut(s) 607
EagI CGGCCG 1 cut(s) 607
Eam1104I CTCTTC 2 cut(s) 84, 2209
EarI CTCTTC 2 cut(s) 84, 2209
Ecl136II GAGCTC 1 cut(s) 408
EclXI CGGCCG 1 cut(s) 607
Eco105I TACGTA 1 cut(s) 460
Eco130I CCWWGG 3 cut(s) 243, 1412, 2250
Eco24I GRGCYC 1 cut(s) 410
Eco47I GGWCC 1 cut(s) 151
Eco47III AGCGCT 1 cut(s) 1587
Eco52I CGGCCG 1 cut(s) 607
Eco53kI GAGCTC 1 cut(s) 408
Eco57I CTGAAG 2 cut(s) 1358, 2229
Eco88I CYCGRG 3 cut(s) 1011, 1287, 1480
EcoICRI GAGCTC 1 cut(s) 408
EcoNI CCTNNNNNAGG 1 cut(s) 1314
EcoRI GAATTC 2 cut(s) 1746, 2176
EcoRII CCWGG 3 cut(s) 1063, 1217, 1762
EcoT14I CCWWGG 3 cut(s) 243, 1412, 2250
EcoT22I ATGCAT 1 cut(s) 1705
EcoT38I GRGCYC 1 cut(s) 410
ErhI CCWWGG 3 cut(s) 243, 1412, 2250
FaeI CATG 6 cut(s) 134, 1385, 1658, 1707, 1961, 2000
FaqI GGGAC 2 cut(s) 845, 1032
FatI CATG 6 cut(s) 130, 1381, 1654, 1703, 1957, 1996
FauI CCCGC 1 cut(s) 1552
FauNDI CATATG 1 cut(s) 1033
FbaI TGATCA 1 cut(s) 2005
FblI GTMKAC 1 cut(s) 805
FokI GGATG 5 cut(s) 1010, 1101, 1111, 1161, 1606
FriOI GRGCYC 1 cut(s) 410
FspBI CTAG 7 cut(s) 572, 701, 896, 1028, 1544, 1851, 2369
GlaI GCGC 4 cut(s) 97, 337, 1587, 2079
GsaI CCCAGC 2 cut(s) 1256, 1592
GsuI CTGGAG 1 cut(s) 1242
HaeII RGCGCY 2 cut(s) 339, 1589
HaeIII GGCC 7 cut(s) 231, 609, 1026, 1217, 1308, 1335, 1485
HapII CCGG 1 cut(s) 207
HgaI GACGC 2 cut(s) 673, 1697
HhaI GCGC 4 cut(s) 98, 338, 1588, 2080
Hin1I GRCGYC 1 cut(s) 1689
Hin1II CATG 6 cut(s) 134, 1385, 1658, 1707, 1961, 2000
Hin6I GCGC 4 cut(s) 96, 336, 1586, 2078
HinP1I GCGC 4 cut(s) 96, 336, 1586, 2078
HincII GTYRAC 3 cut(s) 933, 1521, 1635
HindII GTYRAC 3 cut(s) 933, 1521, 1635
HindIII AAGCTT 1 cut(s) 283
HpaI GTTAAC 1 cut(s) 933
HpaII CCGG 1 cut(s) 207
HphI GGTGA 5 cut(s) 1015, 1241, 1454, 1670, 2183
Hpy188III TCNNGA 6 cut(s) 88, 296, 956, 1907, 1947, 2380
Hpy99I CGWCG 1 cut(s) 206
HpyAV CCTTC 8 cut(s) 413, 750, 1207, 1216, 1486, 1571, 2187, 2284
HpyCH4III ACNGT 8 cut(s) 164, 748, 810, 983, 1345, 1890, 1968, 2299
HpyCH4IV ACGT 3 cut(s) 394, 459, 643
HpyF10VI GCNNNNNNNGC 8 cut(s) 212, 245, 526, 586, 834, 1364, 1853, 2051
HpyF3I CTNAG 8 cut(s) 121, 167, 409, 576, 909, 1395, 2037, 2319
HpySE526I ACGT 3 cut(s) 394, 459, 643
Hsp92I GRCGYC 1 cut(s) 1689
Hsp92II CATG 6 cut(s) 134, 1385, 1658, 1707, 1961, 2000
HspAI GCGC 4 cut(s) 96, 336, 1586, 2078
KroI GCCGGC 1 cut(s) 206
KroNI GCCGGC 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 2005
KspAI GTTAAC 1 cut(s) 933
KspI CCGCGG 1 cut(s) 315
Kzo9I GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
LmnI GCTCC 5 cut(s) 405, 445, 1261, 1580, 2311
Lsp1109I GCAGC 8 cut(s) 435, 438, 1367, 1595, 1859, 2029, 2032, 2125
LweI GCATC 5 cut(s) 312, 493, 933, 1081, 1133
MaeI CTAG 7 cut(s) 572, 701, 896, 1028, 1544, 1851, 2369
MaeII ACGT 3 cut(s) 394, 459, 643
MaeIII GTNAC 4 cut(s) 876, 1237, 1596, 2345
MalI GATC 6 cut(s) 568, 954, 1781, 1943, 2007, 2059
MboI GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
MfeI CAATTG 1 cut(s) 1638
MflI RGATCY 1 cut(s) 952
MhlI GDGCHC 3 cut(s) 400, 410, 895
MluCI AATT 7 cut(s) 343, 1204, 1638, 1746, 2100, 2176, 2328
MlyI GAGTC 4 cut(s) 128, 614, 637, 1406
Mph1103I ATGCAT 1 cut(s) 1705
MroNI GCCGGC 1 cut(s) 206
MseI TTAA 8 cut(s) 615, 689, 798, 932, 977, 1208, 1730, 1892
MslI CAYNNNNRTG 3 cut(s) 1656, 2001, 2354
MspA1I CMGCKG 2 cut(s) 314, 413
MspI CCGG 1 cut(s) 207
MspR9I CCNGG 3 cut(s) 1065, 1219, 1764
MunI CAATTG 1 cut(s) 1638
Mva1269I GAATGC 1 cut(s) 1012
MvaI CCWGG 3 cut(s) 1065, 1219, 1764
MvnI CGCG 3 cut(s) 96, 234, 314
MwoI GCNNNNNNNGC 8 cut(s) 212, 245, 526, 586, 834, 1364, 1853, 2051
NaeI GCCGGC 1 cut(s) 208
NdeI CATATG 1 cut(s) 1033
NdeII GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
NgoMIV GCCGGC 1 cut(s) 206
NlaIII CATG 6 cut(s) 134, 1385, 1658, 1707, 1961, 2000
NlaIV GGNNCC 1 cut(s) 2313
NmuCI GTSAC 1 cut(s) 1596
NsiI ATGCAT 1 cut(s) 1705
NspI RCATGY 1 cut(s) 1707
PaeR7I CTCGAG 1 cut(s) 1287
PctI GAATGC 1 cut(s) 1012
PdiI GCCGGC 1 cut(s) 208
PfeI GAWTC 7 cut(s) 197, 380, 423, 1226, 1421, 1607, 1930
PleI GAGTC 4 cut(s) 128, 614, 636, 1405
PpsI GAGTC 4 cut(s) 128, 614, 636, 1405
Ppu21I YACGTR 1 cut(s) 460
Psp124BI GAGCTC 1 cut(s) 410
Psp1406I AACGTT 1 cut(s) 643
Psp6I CCWGG 3 cut(s) 1063, 1217, 1762
PspFI CCCAGC 2 cut(s) 1252, 1588
PspGI CCWGG 3 cut(s) 1063, 1217, 1762
PspN4I GGNNCC 1 cut(s) 2313
PspPI GGNCC 3 cut(s) 151, 1307, 1483
PspXI VCTCGAGB 1 cut(s) 1287
PstI CTGCAG 2 cut(s) 456, 2115
PstNI CAGNNNCTG 1 cut(s) 908
PsuI RGATCY 1 cut(s) 952
RsaI GTAC 6 cut(s) 220, 458, 515, 745, 1404, 1761
RsaNI GTAC 6 cut(s) 219, 457, 514, 744, 1403, 1760
RseI CAYNNNNRTG 3 cut(s) 1656, 2001, 2354
SacI GAGCTC 1 cut(s) 410
SacII CCGCGG 1 cut(s) 315
SaqAI TTAA 8 cut(s) 615, 689, 798, 932, 977, 1208, 1730, 1892
Sau3AI GATC 6 cut(s) 566, 952, 1779, 1941, 2005, 2057
Sau96I GGNCC 3 cut(s) 151, 1307, 1483
ScaI AGTACT 1 cut(s) 745
SchI GAGTC 4 cut(s) 128, 614, 637, 1406
ScrFI CCNGG 3 cut(s) 1065, 1219, 1764
SduI GDGCHC 3 cut(s) 400, 410, 895
SfaNI GCATC 5 cut(s) 312, 493, 933, 1081, 1133
SfcI CTRYAG 3 cut(s) 452, 1344, 2111
Sfr274I CTCGAG 1 cut(s) 1287
Sfr303I CCGCGG 1 cut(s) 315
SgrBI CCGCGG 1 cut(s) 315
SinI GGWCC 1 cut(s) 151
SlaI CTCGAG 1 cut(s) 1287
SmiMI CAYNNNNRTG 3 cut(s) 1656, 2001, 2354
SmlI CTYRAG 6 cut(s) 286, 326, 668, 956, 1287, 1945
SmoI CTYRAG 6 cut(s) 286, 326, 668, 956, 1287, 1945
SnaBI TACGTA 1 cut(s) 460
SpeI ACTAGT 1 cut(s) 895
Sse9I AATT 7 cut(s) 343, 1204, 1638, 1746, 2100, 2176, 2328
SspI AATATT 1 cut(s) 964
SspMI CTAG 7 cut(s) 572, 701, 896, 1028, 1544, 1851, 2369
SstI GAGCTC 1 cut(s) 410
StyD4I CCNGG 3 cut(s) 1063, 1217, 1762
StyI CCWWGG 3 cut(s) 243, 1412, 2250
TaaI ACNGT 8 cut(s) 164, 748, 810, 983, 1345, 1890, 1968, 2299
TaiI ACGT 3 cut(s) 397, 462, 646
TaqI TCGA 2 cut(s) 426, 1288
TasI AATT 7 cut(s) 343, 1204, 1638, 1746, 2100, 2176, 2328
TatI WGTACW 1 cut(s) 743
TauI GCSGC 4 cut(s) 17, 20, 234, 314
TfiI GAWTC 7 cut(s) 197, 380, 423, 1226, 1421, 1607, 1930
Tru1I TTAA 8 cut(s) 615, 689, 798, 932, 977, 1208, 1730, 1892
Tru9I TTAA 8 cut(s) 615, 689, 798, 932, 977, 1208, 1730, 1892
TscAI CASTG 4 cut(s) 781, 823, 1309, 1431
TseFI GTSAC 1 cut(s) 1596
TseI GCWGC 8 cut(s) 448, 451, 1355, 1583, 1847, 2042, 2045, 2113
Tsp45I GTSAC 1 cut(s) 1596
TspDTI ATGAA 7 cut(s) 615, 798, 1370, 1461, 1734, 1935, 2372
TspGWI ACGGA 3 cut(s) 190, 213, 695
TspRI CASTG 4 cut(s) 781, 823, 1309, 1431
VpaK11BI GGWCC 1 cut(s) 151
XagI CCTNNNNNAGG 1 cut(s) 1314
XapI RAATTY 4 cut(s) 1204, 1746, 2176, 2328
XceI RCATGY 1 cut(s) 1707
XhoI CTCGAG 1 cut(s) 1287
XmiI GTMKAC 1 cut(s) 805
XspI CTAG 7 cut(s) 572, 701, 896, 1028, 1544, 1851, 2369
ZrmI AGTACT 1 cut(s) 745
Zsp2I ATGCAT 1 cut(s) 1705
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.