ATPase domain of DNA mismatch repair MUTS family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G54090 |
| fragaria_vesca | FvH4_7g33260 FvH4_7g33260 |
| malus_domestica | MD07G1302400.v1.1 |
| prunus_persica | Prupe.2G321600_v2.0.a1 |
| pyrus_communis | pycom07g27570 |
| rosa_chinensis | RchiOBHm_Chr1g0383251 |
| rosa_laevigata | RLG00000026119 |
| rosa_multiflora | Rmu_sc0007173.1_g000024 |
| rosa_roxburghii | Rroxscaffold_4G00277470 |
| rosa_rugosa | Rorug01G0439800 |
| rosa_samantha | Rh1AG465500 Rh1BG422900 Rh1CG436100 Rh1DG455600 |
| rosa_wichuraiana | Rw1G040690 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 695 |
| Acc36I | ACCTGC | 1 cut(s) | 1358 |
| AccI | GTMKAC | 2 cut(s) | 799, 2655 |
| AccII | CGCG | 4 cut(s) | 90, 228, 308, 2085 |
| AccIII | TCCGGA | 1 cut(s) | 699 |
| AclI | AACGTT | 1 cut(s) | 637 |
| AclWI | GGATC | 1 cut(s) | 954 |
| AcoI | YGGCCR | 2 cut(s) | 601, 2534 |
| AcsI | RAATTY | 5 cut(s) | 1198, 1740, 2170, 2322, 2518 |
| AcuI | CTGAAG | 1 cut(s) | 2223 |
| AcvI | CACGTG | 1 cut(s) | 2506 |
| AcyI | GRCGYC | 1 cut(s) | 1683 |
| AfaI | GTAC | 7 cut(s) | 214, 452, 509, 739, 1398, 1755, 2427 |
| AfeI | AGCGCT | 1 cut(s) | 1581 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 1571, 2249 |
| AflIII | ACRYGT | 1 cut(s) | 1037 |
| AhlI | ACTAGT | 1 cut(s) | 889 |
| AjnI | CCWGG | 4 cut(s) | 1057, 1211, 1756, 1801 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1308, 1340 |
| Alw21I | GWGCWC | 4 cut(s) | 394, 404, 2435, 2652 |
| Alw26I | GTCTC | 1 cut(s) | 1458 |
| AlwI | GGATC | 1 cut(s) | 954 |
| Ama87I | CYCGRG | 3 cut(s) | 1005, 1474, 1824 |
| Aor13HI | TCCGGA | 1 cut(s) | 699 |
| Aor51HI | AGCGCT | 1 cut(s) | 1581 |
| AoxI | GGCC | 8 cut(s) | 223, 601, 900, 1018, 1209, 2286, 2534, 2599 |
| ApeKI | GCWGC | 9 cut(s) | 442, 445, 1308, 1577, 1841, 2036, 2039, 2107, 2589 |
| ApoI | RAATTY | 5 cut(s) | 1198, 1740, 2170, 2322, 2518 |
| AspLEI | GCGC | 3 cut(s) | 92, 332, 1582 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| AsuHPI | GGTGA | 6 cut(s) | 1009, 1235, 1448, 1664, 2177, 2378 |
| AvaI | CYCGRG | 3 cut(s) | 1005, 1474, 1824 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BaeGI | GKGCMC | 1 cut(s) | 889 |
| BanII | GRGCYC | 2 cut(s) | 404, 2435 |
| BauI | CACGAG | 1 cut(s) | 2556 |
| BbrPI | CACGTG | 1 cut(s) | 2506 |
| BbsI | GAAGAC | 3 cut(s) | 603, 1283, 1364 |
| Bbv12I | GWGCWC | 4 cut(s) | 394, 404, 2435, 2652 |
| BbvI | GCAGC | 9 cut(s) | 429, 432, 1320, 1589, 1853, 2023, 2026, 2119, 2576 |
| BccI | CCATC | 6 cut(s) | 44, 430, 740, 1329, 2230, 2317 |
| BceAI | ACGGC | 3 cut(s) | 343, 588, 616 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 284, 318 |
| BciT130I | CCWGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| BciVI | GTATCC | 1 cut(s) | 2203 |
| BclI | TGATCA | 1 cut(s) | 1999 |
| BcoDI | GTCTC | 1 cut(s) | 1458 |
| BcuI | ACTAGT | 1 cut(s) | 889 |
| BfaI | CTAG | 8 cut(s) | 566, 695, 890, 1022, 1080, 1538, 2363, 2668 |
| BfmI | CTRYAG | 3 cut(s) | 446, 1365, 2105 |
| BfoI | RGCGCY | 2 cut(s) | 333, 1583 |
| BfuAI | ACCTGC | 1 cut(s) | 1358 |
| BfuI | GTATCC | 1 cut(s) | 2203 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 239 |
| BlpI | GCTNAGC | 2 cut(s) | 403, 570 |
| Bme1390I | CCNGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmeT110I | CYCGRG | 3 cut(s) | 1005, 1474, 1824 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmiI | GGNNCC | 1 cut(s) | 2307 |
| BmrFI | CCNGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| BmrI | ACTGGG | 2 cut(s) | 804, 1241 |
| BmsI | GCATC | 7 cut(s) | 306, 487, 927, 1075, 1127, 2420, 2637 |
| BmuI | ACTGGG | 2 cut(s) | 804, 1241 |
| BpiI | GAAGAC | 3 cut(s) | 603, 1283, 1364 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 902, 934 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 403, 570 |
| BpuEI | CTTGAG | 5 cut(s) | 301, 305, 683, 971, 1924 |
| Bsa29I | ATCGAT | 1 cut(s) | 2054 |
| BsaAI | YACGTR | 1 cut(s) | 2506 |
| BsaHI | GRCGYC | 1 cut(s) | 1683 |
| BsaJI | CCNNGG | 7 cut(s) | 237, 306, 903, 1057, 1406, 1757, 2244 |
| BsaWI | WCCGGW | 1 cut(s) | 699 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 23, 37, 53, 67 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 1571, 2249 |
| Bse118I | RCCGGY | 1 cut(s) | 200 |
| Bse1I | ACTGG | 6 cut(s) | 768, 810, 993, 1247, 1253, 1621 |
| Bse3DI | GCAATG | 2 cut(s) | 1684, 2049 |
| BseAI | TCCGGA | 1 cut(s) | 699 |
| BseBI | CCWGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| BseCI | ATCGAT | 1 cut(s) | 2054 |
| BseDI | CCNNGG | 7 cut(s) | 237, 306, 903, 1057, 1406, 1757, 2244 |
| BseGI | GGATG | 6 cut(s) | 997, 1067, 1118, 1168, 1593, 2402 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 1571, 2249 |
| BseMI | GCAATG | 2 cut(s) | 1684, 2049 |
| BseMII | CTCAG | 5 cut(s) | 129, 417, 1380, 2022, 2448 |
| BseNI | ACTGG | 6 cut(s) | 768, 810, 993, 1247, 1253, 1621 |
| BseRI | GAGGAG | 3 cut(s) | 45, 48, 412 |
| BseSI | GKGCMC | 1 cut(s) | 889 |
| BseX3I | CGGCCG | 1 cut(s) | 601 |
| BseXI | GCAGC | 9 cut(s) | 429, 432, 1320, 1589, 1853, 2023, 2026, 2119, 2576 |
| BseYI | CCCAGC | 2 cut(s) | 1582, 2468 |
| BsgI | GTGCAG | 2 cut(s) | 1860, 1869 |
| Bsh1236I | CGCG | 4 cut(s) | 90, 228, 308, 2085 |
| Bsh1285I | CGRYCG | 2 cut(s) | 604, 2054 |
| BshFI | GGCC | 8 cut(s) | 225, 603, 902, 1020, 1211, 2288, 2536, 2601 |
| BshVI | ATCGAT | 1 cut(s) | 2054 |
| BsiEI | CGRYCG | 2 cut(s) | 604, 2054 |
| BsiHKAI | GWGCWC | 4 cut(s) | 394, 404, 2435, 2652 |
| BsiHKCI | CYCGRG | 3 cut(s) | 1005, 1474, 1824 |
| BsiSI | CCGG | 2 cut(s) | 201, 700 |
| BslFI | GGGAC | 4 cut(s) | 839, 1026, 1491, 2582 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 1571, 2249 |
| BsmAI | GTCTC | 1 cut(s) | 1458 |
| BsmFI | GGGAC | 4 cut(s) | 839, 1026, 1491, 2582 |
| BsmI | GAATGC | 1 cut(s) | 1006 |
| BsnI | GGCC | 8 cut(s) | 225, 603, 902, 1020, 1211, 2288, 2536, 2601 |
| BsoBI | CYCGRG | 3 cut(s) | 1005, 1474, 1824 |
| Bsp1286I | GDGCHC | 5 cut(s) | 394, 404, 889, 2435, 2652 |
| Bsp13I | TCCGGA | 1 cut(s) | 699 |
| Bsp1407I | TGTACA | 1 cut(s) | 2425 |
| Bsp143I | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 403, 570 |
| BspANI | GGCC | 8 cut(s) | 225, 603, 902, 1020, 1211, 2288, 2536, 2601 |
| BspCNI | CTCAG | 5 cut(s) | 128, 416, 1381, 2023, 2447 |
| BspDI | ATCGAT | 1 cut(s) | 2054 |
| BspEI | TCCGGA | 1 cut(s) | 699 |
| BspFNI | CGCG | 4 cut(s) | 90, 228, 308, 2085 |
| BspHI | TCATGA | 1 cut(s) | 2550 |
| BspLI | GGNNCC | 1 cut(s) | 2307 |
| BspMAI | CTGCAG | 3 cut(s) | 450, 1369, 2109 |
| BspMI | ACCTGC | 1 cut(s) | 1358 |
| BspPI | GGATC | 1 cut(s) | 954 |
| BsrDI | GCAATG | 2 cut(s) | 1684, 2049 |
| BsrFI | RCCGGY | 1 cut(s) | 200 |
| BsrGI | TGTACA | 1 cut(s) | 2425 |
| BsrI | ACTGG | 6 cut(s) | 768, 810, 993, 1247, 1253, 1621 |
| BssAI | RCCGGY | 1 cut(s) | 200 |
| BssECI | CCNNGG | 7 cut(s) | 237, 306, 903, 1057, 1406, 1757, 2244 |
| BssMI | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| BssNI | GRCGYC | 1 cut(s) | 1683 |
| BssSI | CACGAG | 1 cut(s) | 2556 |
| BssT1I | CCWWGG | 3 cut(s) | 237, 1406, 2244 |
| Bst2BI | CACGAG | 1 cut(s) | 2556 |
| Bst2UI | CCWGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| Bst4CI | ACNGT | 8 cut(s) | 158, 742, 804, 977, 1884, 1962, 2293, 2660 |
| Bst6I | CTCTTC | 2 cut(s) | 78, 2203 |
| BstACI | GRCGYC | 1 cut(s) | 1683 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1847 |
| BstAUI | TGTACA | 1 cut(s) | 2425 |
| BstBAI | YACGTR | 1 cut(s) | 2506 |
| BstC8I | GCNNGC | 3 cut(s) | 202, 334, 2136 |
| BstDEI | CTNAG | 8 cut(s) | 115, 161, 403, 570, 1389, 2031, 2313, 2434 |
| BstDSI | CCRYGG | 1 cut(s) | 306 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1569 |
| BstF5I | GGATG | 6 cut(s) | 997, 1067, 1118, 1168, 1593, 2402 |
| BstFNI | CGCG | 4 cut(s) | 90, 228, 308, 2085 |
| BstH2I | RGCGCY | 2 cut(s) | 333, 1583 |
| BstHHI | GCGC | 3 cut(s) | 92, 332, 1582 |
| BstKTI | GATC | 6 cut(s) | 563, 949, 1776, 1938, 2002, 2054 |
| BstMAI | GTCTC | 1 cut(s) | 1458 |
| BstMBI | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| BstMCI | CGRYCG | 2 cut(s) | 604, 2054 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 206, 239, 520, 580, 828, 1085, 1847, 2045, 2598 |
| BstNI | CCWGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| BstNSI | RCATGY | 2 cut(s) | 1041, 1701 |
| BstSCI | CCNGG | 4 cut(s) | 1057, 1211, 1756, 1801 |
| BstSFI | CTRYAG | 3 cut(s) | 446, 1365, 2105 |
| BstSLI | GKGCMC | 1 cut(s) | 889 |
| BstUI | CGCG | 4 cut(s) | 90, 228, 308, 2085 |
| BstV1I | GCAGC | 9 cut(s) | 429, 432, 1320, 1589, 1853, 2023, 2026, 2119, 2576 |
| BstV2I | GAAGAC | 3 cut(s) | 603, 1283, 1364 |
| BstX2I | RGATCY | 1 cut(s) | 946 |
| BstYI | RGATCY | 1 cut(s) | 946 |
| BstZI | CGGCCG | 1 cut(s) | 601 |
| Bsu15I | ATCGAT | 1 cut(s) | 2054 |
| BsuI | GTATCC | 1 cut(s) | 2203 |
| BsuRI | GGCC | 8 cut(s) | 225, 603, 902, 1020, 1211, 2288, 2536, 2601 |
| BsuTUI | ATCGAT | 1 cut(s) | 2054 |
| BtgI | CCRYGG | 1 cut(s) | 306 |
| BtsCI | GGATG | 6 cut(s) | 997, 1067, 1118, 1168, 1593, 2402 |
| BtsIMutI | CAGTG | 4 cut(s) | 775, 817, 1425, 2442 |
| BveI | ACCTGC | 1 cut(s) | 1358 |
| Cac8I | GCNNGC | 3 cut(s) | 202, 334, 2136 |
| CciI | TCATGA | 1 cut(s) | 2550 |
| CfoI | GCGC | 3 cut(s) | 92, 332, 1582 |
| Cfr10I | RCCGGY | 1 cut(s) | 200 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| Cfr42I | CCGCGG | 1 cut(s) | 309 |
| ClaI | ATCGAT | 1 cut(s) | 2054 |
| CseI | GACGC | 2 cut(s) | 667, 1691 |
| Csp6I | GTAC | 7 cut(s) | 213, 451, 508, 738, 1397, 1754, 2426 |
| CviAII | CATG | 9 cut(s) | 125, 1038, 1376, 1649, 1698, 1952, 1991, 2551, 2572 |
| CviQI | GTAC | 7 cut(s) | 213, 451, 508, 738, 1397, 1754, 2426 |
| DdeI | CTNAG | 8 cut(s) | 115, 161, 403, 570, 1389, 2031, 2313, 2434 |
| DpnI | GATC | 6 cut(s) | 562, 948, 1775, 1937, 2001, 2053 |
| DpnII | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| DraI | TTTAAA | 1 cut(s) | 1203 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 695 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 695 |
| EaeI | YGGCCR | 2 cut(s) | 601, 2534 |
| EagI | CGGCCG | 1 cut(s) | 601 |
| Eam1104I | CTCTTC | 2 cut(s) | 78, 2203 |
| EarI | CTCTTC | 2 cut(s) | 78, 2203 |
| Ecl136II | GAGCTC | 2 cut(s) | 402, 2433 |
| EclXI | CGGCCG | 1 cut(s) | 601 |
| Eco130I | CCWWGG | 3 cut(s) | 237, 1406, 2244 |
| Eco24I | GRGCYC | 2 cut(s) | 404, 2435 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco47III | AGCGCT | 1 cut(s) | 1581 |
| Eco52I | CGGCCG | 1 cut(s) | 601 |
| Eco53kI | GAGCTC | 2 cut(s) | 402, 2433 |
| Eco57I | CTGAAG | 1 cut(s) | 2223 |
| Eco72I | CACGTG | 1 cut(s) | 2506 |
| Eco88I | CYCGRG | 3 cut(s) | 1005, 1474, 1824 |
| EcoICRI | GAGCTC | 2 cut(s) | 402, 2433 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1569 |
| EcoRI | GAATTC | 2 cut(s) | 1740, 2170 |
| EcoRII | CCWGG | 4 cut(s) | 1057, 1211, 1756, 1801 |
| EcoT14I | CCWWGG | 3 cut(s) | 237, 1406, 2244 |
| EcoT22I | ATGCAT | 1 cut(s) | 1699 |
| EcoT38I | GRGCYC | 2 cut(s) | 404, 2435 |
| ErhI | CCWWGG | 3 cut(s) | 237, 1406, 2244 |
| FaeI | CATG | 9 cut(s) | 128, 1041, 1379, 1652, 1701, 1955, 1994, 2554, 2575 |
| FaqI | GGGAC | 4 cut(s) | 839, 1026, 1491, 2582 |
| FatI | CATG | 9 cut(s) | 124, 1037, 1375, 1648, 1697, 1951, 1990, 2550, 2571 |
| FauI | CCCGC | 1 cut(s) | 1546 |
| FbaI | TGATCA | 1 cut(s) | 1999 |
| FblI | GTMKAC | 2 cut(s) | 799, 2655 |
| FokI | GGATG | 6 cut(s) | 1004, 1074, 1105, 1155, 1600, 2389 |
| FriOI | GRGCYC | 2 cut(s) | 404, 2435 |
| FspBI | CTAG | 8 cut(s) | 566, 695, 890, 1022, 1080, 1538, 2363, 2668 |
| GlaI | GCGC | 3 cut(s) | 91, 331, 1581 |
| GsaI | CCCAGC | 2 cut(s) | 1586, 2472 |
| HaeII | RGCGCY | 2 cut(s) | 333, 1583 |
| HaeIII | GGCC | 8 cut(s) | 225, 603, 902, 1020, 1211, 2288, 2536, 2601 |
| HapII | CCGG | 2 cut(s) | 201, 700 |
| HgaI | GACGC | 2 cut(s) | 667, 1691 |
| HhaI | GCGC | 3 cut(s) | 92, 332, 1582 |
| Hin1I | GRCGYC | 1 cut(s) | 1683 |
| Hin1II | CATG | 9 cut(s) | 128, 1041, 1379, 1652, 1701, 1955, 1994, 2554, 2575 |
| Hin6I | GCGC | 3 cut(s) | 90, 330, 1580 |
| HinP1I | GCGC | 3 cut(s) | 90, 330, 1580 |
| HincII | GTYRAC | 4 cut(s) | 927, 1515, 1629, 2640 |
| HindII | GTYRAC | 4 cut(s) | 927, 1515, 1629, 2640 |
| HindIII | AAGCTT | 1 cut(s) | 277 |
| HpaI | GTTAAC | 1 cut(s) | 927 |
| HpaII | CCGG | 2 cut(s) | 201, 700 |
| HphI | GGTGA | 6 cut(s) | 1009, 1235, 1448, 1664, 2177, 2378 |
| Hpy99I | CGWCG | 1 cut(s) | 200 |
| HpyAV | CCTTC | 9 cut(s) | 407, 744, 1201, 1210, 1480, 1565, 2181, 2278, 2386 |
| HpyCH4III | ACNGT | 8 cut(s) | 158, 742, 804, 977, 1884, 1962, 2293, 2660 |
| HpyCH4IV | ACGT | 4 cut(s) | 388, 637, 1108, 2505 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 206, 239, 520, 580, 828, 1085, 1847, 2045, 2598 |
| HpyF3I | CTNAG | 8 cut(s) | 115, 161, 403, 570, 1389, 2031, 2313, 2434 |
| HpySE526I | ACGT | 4 cut(s) | 388, 637, 1108, 2505 |
| Hsp92I | GRCGYC | 1 cut(s) | 1683 |
| Hsp92II | CATG | 9 cut(s) | 128, 1041, 1379, 1652, 1701, 1955, 1994, 2554, 2575 |
| HspAI | GCGC | 3 cut(s) | 90, 330, 1580 |
| Kpn2I | TCCGGA | 1 cut(s) | 699 |
| KroI | GCCGGC | 1 cut(s) | 200 |
| KroNI | GCCGGC | 1 cut(s) | 202 |
| Ksp22I | TGATCA | 1 cut(s) | 1999 |
| KspAI | GTTAAC | 1 cut(s) | 927 |
| KspI | CCGCGG | 1 cut(s) | 309 |
| Kzo9I | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| LmnI | GCTCC | 5 cut(s) | 399, 439, 1574, 2119, 2305 |
| Lsp1109I | GCAGC | 9 cut(s) | 429, 432, 1320, 1589, 1853, 2023, 2026, 2119, 2576 |
| LweI | GCATC | 7 cut(s) | 306, 487, 927, 1075, 1127, 2420, 2637 |
| MaeI | CTAG | 8 cut(s) | 566, 695, 890, 1022, 1080, 1538, 2363, 2668 |
| MaeII | ACGT | 4 cut(s) | 388, 637, 1108, 2505 |
| MaeIII | GTNAC | 7 cut(s) | 138, 870, 1231, 1590, 2339, 2366, 2437 |
| MalI | GATC | 6 cut(s) | 562, 948, 1775, 1937, 2001, 2053 |
| MboI | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| MfeI | CAATTG | 1 cut(s) | 1632 |
| MflI | RGATCY | 1 cut(s) | 946 |
| MhlI | GDGCHC | 5 cut(s) | 394, 404, 889, 2435, 2652 |
| MluCI | AATT | 9 cut(s) | 337, 1198, 1632, 1740, 2094, 2170, 2216, 2322, 2518 |
| MlyI | GAGTC | 8 cut(s) | 122, 369, 608, 631, 1273, 1400, 2386, 2548 |
| MmeI | TCCRAC | 1 cut(s) | 1339 |
| Mph1103I | ATGCAT | 1 cut(s) | 1699 |
| MroI | TCCGGA | 1 cut(s) | 699 |
| MroNI | GCCGGC | 1 cut(s) | 200 |
| MslI | CAYNNNNRTG | 3 cut(s) | 1650, 1995, 2348 |
| MspA1I | CMGCKG | 2 cut(s) | 308, 407 |
| MspI | CCGG | 2 cut(s) | 201, 700 |
| MspR9I | CCNGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| MunI | CAATTG | 1 cut(s) | 1632 |
| Mva1269I | GAATGC | 1 cut(s) | 1006 |
| MvaI | CCWGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| MvnI | CGCG | 4 cut(s) | 90, 228, 308, 2085 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 206, 239, 520, 580, 828, 1085, 1847, 2045, 2598 |
| NaeI | GCCGGC | 1 cut(s) | 202 |
| NdeII | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| NgoMIV | GCCGGC | 1 cut(s) | 200 |
| NlaIII | CATG | 9 cut(s) | 128, 1041, 1379, 1652, 1701, 1955, 1994, 2554, 2575 |
| NlaIV | GGNNCC | 1 cut(s) | 2307 |
| NmeAIII | GCCGAG | 1 cut(s) | 928 |
| NmuCI | GTSAC | 4 cut(s) | 138, 1590, 2366, 2437 |
| NsiI | ATGCAT | 1 cut(s) | 1699 |
| NspI | RCATGY | 2 cut(s) | 1041, 1701 |
| PagI | TCATGA | 1 cut(s) | 2550 |
| PciI | ACATGT | 1 cut(s) | 1037 |
| PctI | GAATGC | 1 cut(s) | 1006 |
| PdiI | GCCGGC | 1 cut(s) | 202 |
| PfeI | GAWTC | 9 cut(s) | 191, 374, 1220, 1415, 1601, 1924, 2056, 2087, 2464 |
| Ple19I | CGATCG | 1 cut(s) | 2054 |
| PleI | GAGTC | 8 cut(s) | 122, 368, 608, 630, 1273, 1399, 2385, 2548 |
| PmaCI | CACGTG | 1 cut(s) | 2506 |
| PmlI | CACGTG | 1 cut(s) | 2506 |
| PpsI | GAGTC | 8 cut(s) | 122, 368, 608, 630, 1273, 1399, 2385, 2548 |
| Ppu21I | YACGTR | 1 cut(s) | 2506 |
| PscI | ACATGT | 1 cut(s) | 1037 |
| Psp124BI | GAGCTC | 2 cut(s) | 404, 2435 |
| Psp1406I | AACGTT | 1 cut(s) | 637 |
| Psp6I | CCWGG | 4 cut(s) | 1057, 1211, 1756, 1801 |
| PspCI | CACGTG | 1 cut(s) | 2506 |
| PspFI | CCCAGC | 2 cut(s) | 1582, 2468 |
| PspGI | CCWGG | 4 cut(s) | 1057, 1211, 1756, 1801 |
| PspN4I | GGNNCC | 1 cut(s) | 2307 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| PstI | CTGCAG | 3 cut(s) | 450, 1369, 2109 |
| PsuI | RGATCY | 1 cut(s) | 946 |
| PvuI | CGATCG | 1 cut(s) | 2054 |
| RsaI | GTAC | 7 cut(s) | 214, 452, 509, 739, 1398, 1755, 2427 |
| RsaNI | GTAC | 7 cut(s) | 213, 451, 508, 738, 1397, 1754, 2426 |
| RseI | CAYNNNNRTG | 3 cut(s) | 1650, 1995, 2348 |
| SacI | GAGCTC | 2 cut(s) | 404, 2435 |
| SacII | CCGCGG | 1 cut(s) | 309 |
| Sau3AI | GATC | 6 cut(s) | 560, 946, 1773, 1935, 1999, 2051 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| SchI | GAGTC | 8 cut(s) | 122, 369, 608, 631, 1273, 1400, 2386, 2548 |
| ScrFI | CCNGG | 4 cut(s) | 1059, 1213, 1758, 1803 |
| SduI | GDGCHC | 5 cut(s) | 394, 404, 889, 2435, 2652 |
| SfaNI | GCATC | 7 cut(s) | 306, 487, 927, 1075, 1127, 2420, 2637 |
| SfcI | CTRYAG | 3 cut(s) | 446, 1365, 2105 |
| Sfr303I | CCGCGG | 1 cut(s) | 309 |
| SgrBI | CCGCGG | 1 cut(s) | 309 |
| SinI | GGWCC | 1 cut(s) | 145 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 1650, 1995, 2348 |
| SmlI | CTYRAG | 5 cut(s) | 280, 320, 662, 950, 1939 |
| SmoI | CTYRAG | 5 cut(s) | 280, 320, 662, 950, 1939 |
| SpeI | ACTAGT | 1 cut(s) | 889 |
| Sse9I | AATT | 9 cut(s) | 337, 1198, 1632, 1740, 2094, 2170, 2216, 2322, 2518 |
| SspI | AATATT | 1 cut(s) | 958 |
| SspMI | CTAG | 8 cut(s) | 566, 695, 890, 1022, 1080, 1538, 2363, 2668 |
| SstI | GAGCTC | 2 cut(s) | 404, 2435 |
| StyD4I | CCNGG | 4 cut(s) | 1057, 1211, 1756, 1801 |
| StyI | CCWWGG | 3 cut(s) | 237, 1406, 2244 |
| TaaI | ACNGT | 8 cut(s) | 158, 742, 804, 977, 1884, 1962, 2293, 2660 |
| TaiI | ACGT | 4 cut(s) | 391, 640, 1111, 2508 |
| TaqI | TCGA | 2 cut(s) | 1282, 2054 |
| TasI | AATT | 9 cut(s) | 337, 1198, 1632, 1740, 2094, 2170, 2216, 2322, 2518 |
| TatI | WGTACW | 1 cut(s) | 2425 |
| TauI | GCSGC | 4 cut(s) | 17, 20, 228, 308 |
| TfiI | GAWTC | 9 cut(s) | 191, 374, 1220, 1415, 1601, 1924, 2056, 2087, 2464 |
| TscAI | CASTG | 4 cut(s) | 775, 817, 1425, 2442 |
| TseFI | GTSAC | 4 cut(s) | 138, 1590, 2366, 2437 |
| TseI | GCWGC | 9 cut(s) | 442, 445, 1308, 1577, 1841, 2036, 2039, 2107, 2589 |
| Tsp45I | GTSAC | 4 cut(s) | 138, 1590, 2366, 2437 |
| TspDTI | ATGAA | 8 cut(s) | 609, 792, 1364, 1455, 1728, 1929, 2366, 2477 |
| TspGWI | ACGGA | 2 cut(s) | 184, 207 |
| TspRI | CASTG | 4 cut(s) | 775, 817, 1425, 2442 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1569 |
| XapI | RAATTY | 5 cut(s) | 1198, 1740, 2170, 2322, 2518 |
| XbaI | TCTAGA | 1 cut(s) | 1537 |
| XceI | RCATGY | 2 cut(s) | 1041, 1701 |
| XmiI | GTMKAC | 2 cut(s) | 799, 2655 |
| XspI | CTAG | 8 cut(s) | 566, 695, 890, 1022, 1080, 1538, 2363, 2668 |
| Zsp2I | ATGCAT | 1 cut(s) | 1699 |