MD08G1046100.v1.1

Polyadenylate-binding protein-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0005353
Physical Location & Seq
Forward (+)
3483999 .. 3488567
4569 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1046100.v1.1.491

Sequence Viewer

Length: 1716 bp
ATGAACTTGTCCAAGAAGGGATCCTTTACCAACGACACCAAACTAAGCACTGCAAACAAGGCAACTGTGTTGAATCCCAATGCAGCAGAGTTTGTTCCCTTTTCCCTCAGATCTCCGTCATCTGGAAGCACCAGCACGGCTCAGGGCTCAAAAAAGTTTTCTTCCGCTGGAACATTTGGAAAAGCAGTACTAGATCGAACAGAATCTTCTATATCAAACAATTCCGATGACGAGGCCCACCAGTACTGGCGCCACCAGCTCCCTGATGATATTACCCCTGATTTTAAGGTCATGGGGGAAGATGAGTCGCAAGGCCTTGGGAACCTCTCTTTGGCAGGTTTGTCCTTACACGATGATGTTGAAGCAACACGGTTTGCTGCCTCTACGGGCAGTGGATACTTATTAAACGAGTCACATACTAATGGCAATAGCTTTTCCGAAAAGTTAAGAGCTTCTGCACCTCCCTTTGGCGGGGAGGATCTTTCATCGGCCAGTTTCCTTCATATGTCACCGAAGCCTTGGGATAAACAGATTCTGAACAGTAATCAGCTTGTTGGCAATGGTCAGGAGGGGTCTCCTTATGATGGCTTTTCTAGACACGGGTTCATGAATGATATGATGGGTGAGCATGCAGTTGTGGAAGATGCTGATATTAACCCTGCTGAGTTTTTGGCTTCACAGTTCCCTGGCTTCTCTGCTCAGAGCGTTGCTGAAGTTTACTTTGCCAATGGCTGTAATTTGAACCTGACTATTGAGATGTTGACTCAGTTGGAGCTTCAAGTTGACGGTGGTTTTAATGAGAATTTGAACTCAAAGGCCTTGTCAGCTCCTGATCTTAGTTCAATGGACTTCCCTGCACTTACGCCAACAGATGGTCATCATGATCATTCAAAATATGCTGGAGATGCTGATCTCCAGCAAAGCAATCCTTATCGATCTTCTGACAAAGACAACATGCTTTTGTTCAAGTCTAGCTCATCAATTCCTAATAGAGGTGCAATAGATTTTGCTTCAGCTGTCAGAAAATTAGCAACCCAGGATTCTGGATGGAAGTATGAGAGAAATGGTTCTGCTGATGCTGCTATTGGCTCAAGCCGTTCCCATCTTTCGAACAGCACTTACAATACTGGGCATGGAAGAGGCATGTACAGCGACAGGTCGCAGAATCGTGGTTCAGCTCGAACTGCACCTGTTTGGCTTGAAACGGGAGATGCCGTTGCAAATATGTATTCTGATCTGCGGGATGAAGCTCGGGACCATGCACGCCTACGTAATGCATATTTTGAGCAGGCACGGCAAGCATACCTTGTTGGAAACAAGGCTCTAGCAAAGGAGCTGAGCGTTAAAGGACAGCTGCACAACATGCATATGAAGGAAGCTCATGGAAAAGCTCAAGAGTCTATATATCGTCAGAGGAACCCAGTTTCTCCAGAGATGCAGGGCAATGGGAGATCACAAGAGAGGATGATAGACCTGCACGGGCTGCACGTAAGTGAAGCCCTTCATGTCCTGAAGCACGAGCTGAGCGTGTTGAGGAATGCTGCCAGAGCAGGAGAGCCTGGTCTTCTGGTTTATATATGTGTTGGAACGGGCCACCACACCAGGGGTTCCCGCACTCCAGCTAGGCTCCCAATTGCTGTACAGCGATACCTACTCGAAGAAGGCCTTGACTACACTGAACCACAGCCAGGGCTGCTCCGAGTTCTGTTATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

572

Amino Acids

62.23

Weight (kDa)

5.93

Isoelectric Point (pI)

36.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 410 - 473 2.4e-19 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 326, 1482
AccB1I GGYRCC 1 cut(s) 249
AccB7I CCANNNNNTGG 1 cut(s) 872
AciI CCGC 4 cut(s) 165, 471, 1240, 1612
AclWI GGATC 3 cut(s) 15, 28, 486
AcoI YGGCCR 1 cut(s) 489
AcsI RAATTY 1 cut(s) 802
AcuI CTGAAG 3 cut(s) 732, 996, 1532
AcyI GRCGYC 1 cut(s) 250
AfaI GTAC 4 cut(s) 189, 245, 1148, 1641
AgsI TTSAA 9 cut(s) 73, 362, 742, 779, 808, 843, 891, 967, 1202
AjnI CCWGG 5 cut(s) 685, 1035, 1558, 1601, 1687
AjuI GAANNNNNNNTTGG 2 cut(s) 314, 346
AleI CACNNNNGTG 1 cut(s) 1491
Alw26I GTCTC 1 cut(s) 579
AlwI GGATC 3 cut(s) 15, 28, 486
AlwNI CAGNNNCTG 2 cut(s) 535, 830
Ama87I CYCGRG 1 cut(s) 1251
AoxI GGCC 6 cut(s) 234, 313, 489, 816, 1591, 1663
ApeKI GCWGC 7 cut(s) 83, 377, 1079, 1354, 1483, 1541, 1693
ApoI RAATTY 1 cut(s) 802
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
Asp700I GAANNNNTTC 2 cut(s) 1066, 1500
AspLEI GCGC 1 cut(s) 252
AspS9I GGNCC 3 cut(s) 235, 1255, 1591
AsuHPI GGTGA 2 cut(s) 501, 635
AsuII TTCGAA 1 cut(s) 1109
AvaI CYCGRG 1 cut(s) 1251
AvaII GGWCC 1 cut(s) 1255
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 249
BanII GRGCYC 1 cut(s) 149
BauI CACGAG 1 cut(s) 1517
BbsI GAAGAC 1 cut(s) 1556
BbvI GCAGC 7 cut(s) 95, 364, 1066, 1341, 1470, 1528, 1680
BccI CCATC 5 cut(s) 578, 613, 866, 1041, 1110
BceAI ACGGC 4 cut(s) 153, 1080, 1199, 1310
BciT130I CCWGG 5 cut(s) 687, 1037, 1560, 1603, 1689
BciVI GTATCC 1 cut(s) 389
BclI TGATCA 1 cut(s) 883
BcoDI GTCTC 1 cut(s) 579
BfaI CTAG 5 cut(s) 191, 594, 972, 1325, 1623
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 2 cut(s) 326, 1482
BfuI GTATCC 1 cut(s) 389
BglII AGATCT 1 cut(s) 110
BisI GCNGC 7 cut(s) 84, 378, 1080, 1355, 1484, 1542, 1694
BlpI GCTNAGC 2 cut(s) 1337, 1523
BlsI GCNGC 7 cut(s) 85, 379, 1081, 1356, 1485, 1543, 1695
BmcAI AGTACT 2 cut(s) 189, 245
Bme1390I CCNGG 5 cut(s) 687, 1037, 1560, 1603, 1689
Bme18I GGWCC 1 cut(s) 1255
BmeT110I CYCGRG 1 cut(s) 1251
BmgT120I GGNCC 3 cut(s) 235, 1255, 1591
BmiI GGNNCC 7 cut(s) 22, 251, 323, 1256, 1418, 1609, 1628
BmrFI CCNGG 5 cut(s) 687, 1037, 1560, 1603, 1689
BmrI ACTGGG 2 cut(s) 1137, 1415
BmsI GCATC 5 cut(s) 634, 895, 1066, 1201, 1425
BmuI ACTGGG 2 cut(s) 1137, 1415
BpiI GAAGAC 1 cut(s) 1556
BpmI CTGGAG 4 cut(s) 899, 921, 1413, 1602
Bpu10I CCTNAGC 1 cut(s) 141
Bpu1102I GCTNAGC 2 cut(s) 1337, 1523
Bpu14I TTCGAA 1 cut(s) 1109
BpuEI CTTGAG 2 cut(s) 1075, 1377
Bsa29I ATCGAT 1 cut(s) 934
BsaAI YACGTR 2 cut(s) 1271, 1489
BsaBI GATNNNNATC 2 cut(s) 876, 909
BsaHI GRCGYC 1 cut(s) 250
BsaI GGTCTC 1 cut(s) 579
BsaJI CCNNGG 6 cut(s) 316, 518, 685, 1035, 1602, 1688
BsaXI ACNNNNNCTCC 2 cut(s) 1200, 1230
Bse1I ACTGG 5 cut(s) 241, 251, 492, 1132, 1421
Bse3DI GCAATG 2 cut(s) 565, 1450
Bse8I GATNNNNATC 2 cut(s) 876, 909
BseBI CCWGG 5 cut(s) 687, 1037, 1560, 1603, 1689
BseCI ATCGAT 1 cut(s) 934
BseDI CCNNGG 6 cut(s) 316, 518, 685, 1035, 1602, 1688
BseGI GGATG 3 cut(s) 1052, 1249, 1470
BseJI GATNNNNATC 2 cut(s) 876, 909
BseMI GCAATG 2 cut(s) 565, 1450
BseMII CTCAG 7 cut(s) 121, 155, 654, 713, 779, 1328, 1514
BseNI ACTGG 5 cut(s) 241, 251, 492, 1132, 1421
BseXI GCAGC 7 cut(s) 95, 364, 1066, 1341, 1470, 1528, 1680
BsgI GTGCAG 6 cut(s) 441, 840, 1170, 1340, 1460, 1469
BshFI GGCC 6 cut(s) 236, 315, 491, 818, 1593, 1665
BshNI GGYRCC 1 cut(s) 249
BshVI ATCGAT 1 cut(s) 934
BsiHKCI CYCGRG 1 cut(s) 1251
BslFI GGGAC 1 cut(s) 1268
BsmAI GTCTC 1 cut(s) 579
BsmFI GGGAC 1 cut(s) 1268
BsmI GAATGC 1 cut(s) 1543
BsnI GGCC 6 cut(s) 236, 315, 491, 818, 1593, 1665
Bso31I GGTCTC 1 cut(s) 579
BsoBI CYCGRG 1 cut(s) 1251
Bsp119I TTCGAA 1 cut(s) 1109
Bsp1286I GDGCHC 1 cut(s) 149
Bsp1407I TGTACA 2 cut(s) 1146, 1639
Bsp1720I GCTNAGC 2 cut(s) 1337, 1523
BspACI CCGC 4 cut(s) 165, 471, 1240, 1612
BspANI GGCC 6 cut(s) 236, 315, 491, 818, 1593, 1665
BspCNI CTCAG 7 cut(s) 120, 154, 655, 712, 778, 1329, 1515
BspDI ATCGAT 1 cut(s) 934
BspHI TCATGA 2 cut(s) 606, 880
BspLI GGNNCC 7 cut(s) 22, 251, 323, 1256, 1418, 1609, 1628
BspMI ACCTGC 2 cut(s) 326, 1482
BspPI GGATC 3 cut(s) 15, 28, 486
BspT104I TTCGAA 1 cut(s) 1109
BspT107I GGYRCC 1 cut(s) 249
BspTNI GGTCTC 1 cut(s) 579
BsrDI GCAATG 2 cut(s) 565, 1450
BsrGI TGTACA 2 cut(s) 1146, 1639
BsrI ACTGG 5 cut(s) 241, 251, 492, 1132, 1421
BssECI CCNNGG 6 cut(s) 316, 518, 685, 1035, 1602, 1688
BssNI GRCGYC 1 cut(s) 250
BssSI CACGAG 1 cut(s) 1517
BssT1I CCWWGG 2 cut(s) 316, 518
Bst2BI CACGAG 1 cut(s) 1517
Bst2UI CCWGG 5 cut(s) 687, 1037, 1560, 1603, 1689
Bst4CI ACNGT 5 cut(s) 67, 372, 542, 681, 788
Bst6I CTCTTC 1 cut(s) 1132
BstACI GRCGYC 1 cut(s) 250
BstAPI GCANNNNNTGC 2 cut(s) 1363, 1483
BstAUI TGTACA 2 cut(s) 1146, 1639
BstBAI YACGTR 2 cut(s) 1271, 1489
BstBI TTCGAA 1 cut(s) 1109
BstC8I GCNNGC 4 cut(s) 630, 1264, 1290, 1299
BstDEI CTNAG 9 cut(s) 44, 107, 141, 663, 699, 765, 836, 1337, 1523
BstENI CCTNNNNNAGG 1 cut(s) 990
BstF5I GGATG 3 cut(s) 1052, 1249, 1470
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 1 cut(s) 252
BstMAI GTCTC 1 cut(s) 579
BstNI CCWGG 5 cut(s) 687, 1037, 1560, 1603, 1689
BstNSI RCATGY 4 cut(s) 632, 958, 1147, 1366
BstSCI CCNGG 5 cut(s) 685, 1035, 1558, 1601, 1687
BstSNI TACGTA 1 cut(s) 1271
BstV1I GCAGC 7 cut(s) 95, 364, 1066, 1341, 1470, 1528, 1680
BstV2I GAAGAC 1 cut(s) 1556
BstX2I RGATCY 3 cut(s) 20, 110, 478
BstXI CCANNNNNNTGG 1 cut(s) 1043
BstYI RGATCY 3 cut(s) 20, 110, 478
Bsu15I ATCGAT 1 cut(s) 934
BsuI GTATCC 1 cut(s) 389
BsuRI GGCC 6 cut(s) 236, 315, 491, 818, 1593, 1665
BsuTUI ATCGAT 1 cut(s) 934
BtsCI GGATG 3 cut(s) 1052, 1249, 1470
BtsI GCAGTG 2 cut(s) 48, 397
BtsIMutI CAGTG 3 cut(s) 48, 397, 1674
BveI ACCTGC 2 cut(s) 326, 1482
Cac8I GCNNGC 4 cut(s) 630, 1264, 1290, 1299
CaiI CAGNNNCTG 2 cut(s) 535, 830
CciI TCATGA 2 cut(s) 606, 880
CfoI GCGC 1 cut(s) 252
Cfr13I GGNCC 3 cut(s) 235, 1255, 1591
ClaI ATCGAT 1 cut(s) 934
Csp6I GTAC 4 cut(s) 188, 244, 1147, 1640
CviQI GTAC 4 cut(s) 188, 244, 1147, 1640
DdeI CTNAG 9 cut(s) 44, 107, 141, 663, 699, 765, 836, 1337, 1523
DinI GGCGCC 1 cut(s) 251
EaeI YGGCCR 1 cut(s) 489
Eam1104I CTCTTC 1 cut(s) 1132
EarI CTCTTC 1 cut(s) 1132
Eco105I TACGTA 1 cut(s) 1271
Eco130I CCWWGG 2 cut(s) 316, 518
Eco147I AGGCCT 3 cut(s) 315, 818, 1665
Eco24I GRGCYC 1 cut(s) 149
Eco31I GGTCTC 1 cut(s) 579
Eco47I GGWCC 1 cut(s) 1255
Eco57I CTGAAG 3 cut(s) 732, 996, 1532
Eco88I CYCGRG 1 cut(s) 1251
EcoNI CCTNNNNNAGG 1 cut(s) 990
EcoRII CCWGG 5 cut(s) 685, 1035, 1558, 1601, 1687
EcoT14I CCWWGG 2 cut(s) 316, 518
EcoT22I ATGCAT 2 cut(s) 1279, 1368
EcoT38I GRGCYC 1 cut(s) 149
EgeI GGCGCC 1 cut(s) 251
EheI GGCGCC 1 cut(s) 251
ErhI CCWWGG 2 cut(s) 316, 518
FalI AAGNNNNNCTT 8 cut(s) 8, 40, 913, 945, 1290, 1322, 1650, 1682
FaqI GGGAC 1 cut(s) 1268
FauI CCCGC 3 cut(s) 464, 1233, 1619
FauNDI CATATG 2 cut(s) 504, 1368
FbaI TGATCA 1 cut(s) 883
Fnu4HI GCNGC 7 cut(s) 84, 378, 1080, 1355, 1484, 1542, 1694
FokI GGATG 3 cut(s) 1059, 1256, 1477
FriOI GRGCYC 1 cut(s) 149
Fsp4HI GCNGC 7 cut(s) 84, 378, 1080, 1355, 1484, 1542, 1694
FspBI CTAG 5 cut(s) 191, 594, 972, 1325, 1623
GlaI GCGC 1 cut(s) 251
GluI GCNGC 7 cut(s) 84, 378, 1080, 1355, 1484, 1542, 1694
GsuI CTGGAG 4 cut(s) 899, 921, 1413, 1602
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 6 cut(s) 236, 315, 491, 818, 1593, 1665
HhaI GCGC 1 cut(s) 252
Hin1I GRCGYC 1 cut(s) 250
Hin6I GCGC 1 cut(s) 250
HinP1I GCGC 1 cut(s) 250
HincII GTYRAC 2 cut(s) 762, 784
HindII GTYRAC 2 cut(s) 762, 784
HinfI GANTC 9 cut(s) 73, 203, 305, 410, 532, 763, 1040, 1165, 1397
HphI GGTGA 2 cut(s) 501, 635
Hpy166II GTNNAC 3 cut(s) 718, 762, 784
Hpy8I GTNNAC 3 cut(s) 718, 762, 784
HpyAV CCTTC 5 cut(s) 10, 509, 1366, 1511, 1655
HpyCH4III ACNGT 5 cut(s) 67, 372, 542, 681, 788
HpyCH4IV ACGT 2 cut(s) 1270, 1488
HpyF3I CTNAG 9 cut(s) 44, 107, 141, 663, 699, 765, 836, 1337, 1523
HpySE526I ACGT 2 cut(s) 1270, 1488
Hsp92I GRCGYC 1 cut(s) 250
HspAI GCGC 1 cut(s) 250
KasI GGCGCC 1 cut(s) 249
Ksp22I TGATCA 1 cut(s) 883
LmnI GCTCC 6 cut(s) 264, 772, 832, 1333, 1632, 1701
Lsp1109I GCAGC 7 cut(s) 95, 364, 1066, 1341, 1470, 1528, 1680
LweI GCATC 5 cut(s) 634, 895, 1066, 1201, 1425
MaeI CTAG 5 cut(s) 191, 594, 972, 1325, 1623
MaeII ACGT 2 cut(s) 1270, 1488
MaeIII GTNAC 2 cut(s) 411, 507
MboII GAAGA 8 cut(s) 153, 198, 311, 653, 930, 1149, 1556, 1670
MfeI CAATTG 1 cut(s) 1632
MflI RGATCY 3 cut(s) 20, 110, 478
MhlI GDGCHC 1 cut(s) 149
MluCI AATT 6 cut(s) 220, 736, 802, 981, 1025, 1632
Mly113I GGCGCC 1 cut(s) 250
MlyI GAGTC 4 cut(s) 314, 419, 757, 1406
MmeI TCCRAC 3 cut(s) 750, 1291, 1564
Mph1103I ATGCAT 2 cut(s) 1279, 1368
MroXI GAANNNNTTC 2 cut(s) 1066, 1500
MseI TTAA 6 cut(s) 285, 404, 446, 654, 795, 1344
MslI CAYNNNNRTG 4 cut(s) 354, 420, 1367, 1491
MspA1I CMGCKG 3 cut(s) 167, 1016, 1354
MspR9I CCNGG 5 cut(s) 687, 1037, 1560, 1603, 1689
MunI CAATTG 1 cut(s) 1632
Mva1269I GAATGC 1 cut(s) 1543
MvaI CCWGG 5 cut(s) 687, 1037, 1560, 1603, 1689
NarI GGCGCC 1 cut(s) 250
NdeI CATATG 2 cut(s) 504, 1368
NlaIV GGNNCC 7 cut(s) 22, 251, 323, 1256, 1418, 1609, 1628
NmuCI GTSAC 2 cut(s) 411, 507
NsiI ATGCAT 2 cut(s) 1279, 1368
NspI RCATGY 4 cut(s) 632, 958, 1147, 1366
NspV TTCGAA 1 cut(s) 1109
OliI CACNNNNGTG 1 cut(s) 1491
PaeI GCATGC 1 cut(s) 632
PagI TCATGA 2 cut(s) 606, 880
PceI AGGCCT 3 cut(s) 315, 818, 1665
PcsI WCGNNNNNNNCGW 2 cut(s) 1485, 1524
PctI GAATGC 1 cut(s) 1543
PdmI GAANNNNTTC 2 cut(s) 1066, 1500
PfeI GAWTC 5 cut(s) 73, 203, 532, 1040, 1165
PflMI CCANNNNNTGG 1 cut(s) 872
PkrI GCNGC 7 cut(s) 85, 379, 1081, 1356, 1485, 1543, 1695
PleI GAGTC 4 cut(s) 313, 418, 757, 1405
PluTI GGCGCC 1 cut(s) 253
PpsI GAGTC 4 cut(s) 313, 418, 757, 1405
Ppu21I YACGTR 2 cut(s) 1271, 1489
Psp6I CCWGG 5 cut(s) 685, 1035, 1558, 1601, 1687
PspGI CCWGG 5 cut(s) 685, 1035, 1558, 1601, 1687
PspN4I GGNNCC 7 cut(s) 22, 251, 323, 1256, 1418, 1609, 1628
PspPI GGNCC 3 cut(s) 235, 1255, 1591
PsrI GAACNNNNNNTAC 2 cut(s) 1103, 1135
PstNI CAGNNNCTG 2 cut(s) 535, 830
PsuI RGATCY 3 cut(s) 20, 110, 478
PvuII CAGCTG 2 cut(s) 1016, 1354
RsaI GTAC 4 cut(s) 189, 245, 1148, 1641
RsaNI GTAC 4 cut(s) 188, 244, 1147, 1640
RseI CAYNNNNRTG 4 cut(s) 354, 420, 1367, 1491
SaqAI TTAA 6 cut(s) 285, 404, 446, 654, 795, 1344
SatI GCNGC 7 cut(s) 84, 378, 1080, 1355, 1484, 1542, 1694
Sau96I GGNCC 3 cut(s) 235, 1255, 1591
ScaI AGTACT 2 cut(s) 189, 245
SchI GAGTC 4 cut(s) 314, 419, 757, 1406
ScrFI CCNGG 5 cut(s) 687, 1037, 1560, 1603, 1689
SduI GDGCHC 1 cut(s) 149
SfaNI GCATC 5 cut(s) 634, 895, 1066, 1201, 1425
SfoI GGCGCC 1 cut(s) 251
SfuI TTCGAA 1 cut(s) 1109
SinI GGWCC 1 cut(s) 1255
SmiMI CAYNNNNRTG 4 cut(s) 354, 420, 1367, 1491
SmlI CTYRAG 2 cut(s) 1090, 1392
SmoI CTYRAG 2 cut(s) 1090, 1392
SnaBI TACGTA 1 cut(s) 1271
SphI GCATGC 1 cut(s) 632
Sse9I AATT 6 cut(s) 220, 736, 802, 981, 1025, 1632
SseBI AGGCCT 3 cut(s) 315, 818, 1665
SsiI CCGC 4 cut(s) 165, 471, 1240, 1612
SspDI GGCGCC 1 cut(s) 249
SspMI CTAG 5 cut(s) 191, 594, 972, 1325, 1623
StuI AGGCCT 3 cut(s) 315, 818, 1665
StyD4I CCNGG 5 cut(s) 685, 1035, 1558, 1601, 1687
StyI CCWWGG 2 cut(s) 316, 518
TaaI ACNGT 5 cut(s) 67, 372, 542, 681, 788
TaiI ACGT 2 cut(s) 1273, 1491
TaqI TCGA 5 cut(s) 196, 934, 1109, 1180, 1656
TasI AATT 6 cut(s) 220, 736, 802, 981, 1025, 1632
TatI WGTACW 4 cut(s) 187, 243, 1146, 1639
TfiI GAWTC 5 cut(s) 73, 203, 532, 1040, 1165
Tru1I TTAA 6 cut(s) 285, 404, 446, 654, 795, 1344
Tru9I TTAA 6 cut(s) 285, 404, 446, 654, 795, 1344
TscAI CASTG 3 cut(s) 55, 397, 1681
TseFI GTSAC 2 cut(s) 411, 507
TseI GCWGC 7 cut(s) 83, 377, 1079, 1354, 1483, 1541, 1693
Tsp45I GTSAC 2 cut(s) 411, 507
TspDTI ATGAA 8 cut(s) 17, 474, 491, 595, 623, 1260, 1385, 1493
TspGWI ACGGA 1 cut(s) 105
TspRI CASTG 3 cut(s) 55, 397, 1681
Van91I CCANNNNNTGG 1 cut(s) 872
VpaK11BI GGWCC 1 cut(s) 1255
XagI CCTNNNNNAGG 1 cut(s) 990
XapI RAATTY 1 cut(s) 802
XbaI TCTAGA 1 cut(s) 593
XceI RCATGY 4 cut(s) 632, 958, 1147, 1366
XmnI GAANNNNTTC 2 cut(s) 1066, 1500
XspI CTAG 5 cut(s) 191, 594, 972, 1325, 1623
ZrmI AGTACT 2 cut(s) 189, 245
Zsp2I ATGCAT 2 cut(s) 1279, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.