MD15G1047700.v1.1

Polyadenylate-binding protein-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0005353
Physical Location & Seq
Reverse (-)
3273871 .. 3278391
4521 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1047700.v1.1.491

Sequence Viewer

Length: 1722 bp
ATGAGCTTGTCCAAGAAAGGATCCTTTACCAACGACACCAAACTAAGCACTGCAAACAAGGCAACTGCATTGAATCCCAATGCAGCAGAGTTTGTTCCCTTTTCCCTCAGATCCCCGTCATCTGGAAGCACCAGCGCAGCTCAGGCCACAACAAAGTTTTCTTCTTCTGGAACATTTGGAAAAGCAGTACTAGATCGAACAGAATCTTCCACATCAAATAATTCCGATGATGAGGCGCACCAATATTGGCGCCACCAGCTCCCTGATGATATTACCCCTGACTTTAAGGTCATGGGAGAAGATGAGTCGCAAGGCCTTGGGAACCTCTCTTTAGCGGGTTTGTCCTTACACGAAGATGTTGAAGCAACACGGTTTCCTGCCTCTACGGGCAGTGGATACTTATTAAACGAGTCACATATTAATGGCAATAGCTTTTCTGAAAAGTTGAGAGCTTCTGCACCTCCCTTTGGGGGGGAGGATCTTTCATCGGCCAGTTTCCTTCATATGTCACCTAAGCCTTGGGATAAGCAGATTCTGAACAGCAATCAGTTTGTCAGCAATGGTCAGGAGGAGTATCCGTATGATGGCATGTCTAGACACGGGTTCATGAATGATATGTTGGGTGAGCATGCAATCGTGGAAGGTGCGGATATTAACCCTGCTGAGTTTTTGGCTTCACAGTTCCCCGGCTTTTCTGCTCAGAGCCTTGCTGAAGTTTACTTTGCCAATGGTTGTGACTTGAACCTGACTGTTGAGATGTTAACTCAGTTGGAGCTTCAAGTTGATGGTGGTTTTAATGAGAATCTGAACTCAAAGACCTTGTCAGTTCCCGATCTTAGCTCAATGGACTTCCCTGCACTTACACCAACAGATGGTCAGCATGGTCATTCAAAATATGCCGGAGATGATGATTTCCAAAGCGGCAATCCTTATCGATCTTCTGACAAGGACAACATGCTTTTGTTCAAGTCTAGCTCATCAATTCCTACTAGAGGTGCAATAGATTTTGCTTCAGCTGTCAGGAAATTGGCGACCCAGGATTCTGGATGGAAGTATGAGAGAAACGGTTCTGCTGATGCTGCTATTGGCTCAAGCAGACGTTCCCAGCTTTTGAATAGCACTTACAGTACTGGACATGGAAGAGGCATGTACAGCGACAGGTCACAGAATCGTGGTTCACCTCGGACTGCGCCTGTTTGGCTTGAAACTGGAGATGCAGTTGCAAATATGTATTCTGATCTGCGGGATGAAGCTCGGGACCATGCACGCCTACGTAATGCATACTTTGAGCAGGCACGGCAAGCATACCTTGTTGGAAACAAGGCTCTAGCAAAGGAGCTGAGCGTTAAAGGACAGCTGCACAACATGCATATGAAGGAAGCTCATGAAAAAGCTCAAGAGTCTATATATCGTCAGAGGAACCCAGTTTCTCCAGAGATGCAGGGCAATGGGAGGTCACAAGAGAGGATGATAGACCTGCACGGGCTGCATGTAAGTGAAGCCCTTCATGTCCTGAAGCACGAGCTGAGCGTGTTGAGGAACGCTGCCAGAGCAGGAGAGCCTGGTATTCTGGTTTATATATGTGTGGGAACTGGCCACCACACCAGGGGCTCTCGCACACCGGCAAGGCTCCCAATAGCTGTACAGCGATACCTACTCGAAGAAGAAGGCATTGACTACACTGAACCACAGCCAGGGCTGCTCCGAATTCTGTTATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

574

Amino Acids

62.71

Weight (kDa)

5.68

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 411 - 474 8e-20 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 287
Acc36I ACCTGC 1 cut(s) 1485
AccB1I GGYRCC 1 cut(s) 249
AccB7I CCANNNNNTGG 1 cut(s) 872
AciI CCGC 4 cut(s) 335, 647, 921, 1243
AclWI GGATC 4 cut(s) 15, 28, 105, 486
AcoI YGGCCR 2 cut(s) 489, 1594
AcsI RAATTY 1 cut(s) 1707
AcuI CTGAAG 3 cut(s) 732, 996, 1535
AcyI GRCGYC 1 cut(s) 250
AfaI GTAC 4 cut(s) 189, 1129, 1151, 1644
AfiI CCNNNNNNNGG 9 cut(s) 122, 467, 470, 471, 584, 872, 992, 1606, 1694
AgsI TTSAA 8 cut(s) 73, 362, 742, 779, 891, 967, 1114, 1205
AjnI CCWGG 4 cut(s) 1035, 1561, 1604, 1693
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
AlwI GGATC 4 cut(s) 15, 28, 105, 486
AlwNI CAGNNNCTG 1 cut(s) 535
Ama87I CYCGRG 1 cut(s) 1254
AoxI GGCC 4 cut(s) 144, 313, 489, 1594
ApeKI GCWGC 7 cut(s) 83, 137, 1079, 1357, 1486, 1544, 1699
ApoI RAATTY 1 cut(s) 1707
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AseI ATTAAT 1 cut(s) 420
Asp700I GAANNNNTTC 2 cut(s) 1066, 1503
AspLEI GCGC 4 cut(s) 137, 238, 252, 1192
AspS9I GGNCC 1 cut(s) 1258
AsuC2I CCSGG 1 cut(s) 687
AsuHPI GGTGA 3 cut(s) 501, 635, 1170
AvaI CYCGRG 1 cut(s) 1254
AvaII GGWCC 1 cut(s) 1258
BalI TGGCCA 1 cut(s) 1596
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 249
BanII GRGCYC 1 cut(s) 1613
BauI CACGAG 1 cut(s) 1520
BbvI GCAGC 7 cut(s) 95, 149, 1066, 1344, 1473, 1531, 1686
BccI CCATC 4 cut(s) 578, 779, 866, 1041
BceAI ACGGC 1 cut(s) 1313
BciT130I CCWGG 4 cut(s) 1037, 1563, 1606, 1695
BciVI GTATCC 2 cut(s) 389, 585
BcnI CCSGG 1 cut(s) 687
BfaI CTAG 5 cut(s) 191, 594, 972, 990, 1328
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 1 cut(s) 1485
BfuI GTATCC 2 cut(s) 389, 585
BglI GCCNNNNNGGC 1 cut(s) 1198
BisI GCNGC 8 cut(s) 84, 138, 922, 1080, 1358, 1487, 1545, 1700
BlpI GCTNAGC 2 cut(s) 1340, 1526
BlsI GCNGC 8 cut(s) 85, 139, 923, 1081, 1359, 1488, 1546, 1701
BmcAI AGTACT 2 cut(s) 189, 1129
Bme1390I CCNGG 5 cut(s) 687, 1037, 1563, 1606, 1695
Bme18I GGWCC 1 cut(s) 1258
BmeT110I CYCGRG 1 cut(s) 1254
BmgT120I GGNCC 1 cut(s) 1258
BmiI GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
BmrFI CCNGG 5 cut(s) 687, 1037, 1563, 1606, 1695
BmrI ACTGGG 1 cut(s) 1418
BmsI GCATC 3 cut(s) 1066, 1204, 1428
BmuI ACTGGG 1 cut(s) 1418
BpmI CTGGAG 2 cut(s) 1230, 1416
Bpu10I CCTNAGC 2 cut(s) 141, 513
Bpu1102I GCTNAGC 2 cut(s) 1340, 1526
BpuEI CTTGAG 2 cut(s) 1075, 1380
BpuMI CCSGG 1 cut(s) 687
Bsa29I ATCGAT 1 cut(s) 934
BsaAI YACGTR 1 cut(s) 1274
BsaHI GRCGYC 1 cut(s) 250
BsaJI CCNNGG 7 cut(s) 316, 518, 685, 1035, 1181, 1605, 1694
BsaXI ACNNNNNCTCC 4 cut(s) 563, 593, 1203, 1233
Bsc4I CCNNNNNNNGG 9 cut(s) 122, 467, 470, 471, 584, 872, 992, 1606, 1694
Bse118I RCCGGY 1 cut(s) 1621
Bse1I ACTGG 5 cut(s) 492, 1135, 1213, 1424, 1597
Bse3DI GCAATG 2 cut(s) 565, 1453
BseBI CCWGG 4 cut(s) 1037, 1563, 1606, 1695
BseCI ATCGAT 1 cut(s) 934
BseDI CCNNGG 7 cut(s) 316, 518, 685, 1035, 1181, 1605, 1694
BseGI GGATG 3 cut(s) 1052, 1252, 1473
BseLI CCNNNNNNNGG 9 cut(s) 122, 467, 470, 471, 584, 872, 992, 1606, 1694
BseMI GCAATG 2 cut(s) 565, 1453
BseMII CTCAG 7 cut(s) 121, 155, 654, 713, 779, 1331, 1517
BseNI ACTGG 5 cut(s) 492, 1135, 1213, 1424, 1597
BseRI GAGGAG 1 cut(s) 584
BseXI GCAGC 7 cut(s) 95, 149, 1066, 1344, 1473, 1531, 1686
BseYI CCCAGC 1 cut(s) 1104
BsgI GTGCAG 4 cut(s) 441, 840, 1343, 1463
BshFI GGCC 4 cut(s) 146, 315, 491, 1596
BshNI GGYRCC 1 cut(s) 249
BshVI ATCGAT 1 cut(s) 934
BsiHKCI CYCGRG 1 cut(s) 1254
BsiSI CCGG 3 cut(s) 687, 900, 1622
BslFI GGGAC 1 cut(s) 1271
BslI CCNNNNNNNGG 9 cut(s) 122, 467, 470, 471, 584, 872, 992, 1606, 1694
BsmFI GGGAC 1 cut(s) 1271
BsnI GGCC 4 cut(s) 146, 315, 491, 1596
BsoBI CYCGRG 1 cut(s) 1254
Bsp1286I GDGCHC 1 cut(s) 1613
Bsp1407I TGTACA 2 cut(s) 1149, 1642
Bsp143I GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
Bsp1720I GCTNAGC 2 cut(s) 1340, 1526
BspACI CCGC 4 cut(s) 335, 647, 921, 1243
BspANI GGCC 4 cut(s) 146, 315, 491, 1596
BspCNI CTCAG 7 cut(s) 120, 154, 655, 712, 778, 1332, 1518
BspDI ATCGAT 1 cut(s) 934
BspHI TCATGA 2 cut(s) 606, 1384
BspLI GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
BspMI ACCTGC 1 cut(s) 1485
BspPI GGATC 4 cut(s) 15, 28, 105, 486
BspT107I GGYRCC 1 cut(s) 249
BsrDI GCAATG 2 cut(s) 565, 1453
BsrFI RCCGGY 1 cut(s) 1621
BsrGI TGTACA 2 cut(s) 1149, 1642
BsrI ACTGG 5 cut(s) 492, 1135, 1213, 1424, 1597
BssAI RCCGGY 1 cut(s) 1621
BssECI CCNNGG 7 cut(s) 316, 518, 685, 1035, 1181, 1605, 1694
BssMI GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
BssNI GRCGYC 1 cut(s) 250
BssSI CACGAG 1 cut(s) 1520
BssT1I CCWWGG 2 cut(s) 316, 518
Bst2BI CACGAG 1 cut(s) 1520
Bst2UI CCWGG 4 cut(s) 1037, 1563, 1606, 1695
Bst4CI ACNGT 5 cut(s) 372, 681, 751, 1067, 1127
Bst6I CTCTTC 1 cut(s) 1135
BstACI GRCGYC 1 cut(s) 250
BstAPI GCANNNNNTGC 2 cut(s) 1366, 1486
BstAUI TGTACA 2 cut(s) 1149, 1642
BstBAI YACGTR 1 cut(s) 1274
BstC8I GCNNGC 4 cut(s) 630, 1267, 1293, 1302
BstENI CCTNNNNNAGG 1 cut(s) 990
BstF5I GGATG 3 cut(s) 1052, 1252, 1473
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 4 cut(s) 137, 238, 252, 1192
BstKTI GATC 7 cut(s) 23, 113, 196, 481, 835, 938, 1240
BstMBI GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
BstNI CCWGG 4 cut(s) 1037, 1563, 1606, 1695
BstNSI RCATGY 6 cut(s) 592, 632, 958, 1150, 1369, 1493
BstSCI CCNGG 5 cut(s) 685, 1035, 1561, 1604, 1693
BstSNI TACGTA 1 cut(s) 1274
BstV1I GCAGC 7 cut(s) 95, 149, 1066, 1344, 1473, 1531, 1686
BstX2I RGATCY 3 cut(s) 20, 110, 478
BstXI CCANNNNNNTGG 1 cut(s) 1043
BstYI RGATCY 3 cut(s) 20, 110, 478
Bsu15I ATCGAT 1 cut(s) 934
BsuI GTATCC 2 cut(s) 389, 585
BsuRI GGCC 4 cut(s) 146, 315, 491, 1596
BsuTUI ATCGAT 1 cut(s) 934
BtsCI GGATG 3 cut(s) 1052, 1252, 1473
BtsI GCAGTG 2 cut(s) 48, 397
BtsIMutI CAGTG 3 cut(s) 48, 397, 1680
BveI ACCTGC 1 cut(s) 1485
Cac8I GCNNGC 4 cut(s) 630, 1267, 1293, 1302
CaiI CAGNNNCTG 1 cut(s) 535
CciI TCATGA 2 cut(s) 606, 1384
CfoI GCGC 4 cut(s) 137, 238, 252, 1192
Cfr10I RCCGGY 1 cut(s) 1621
Cfr13I GGNCC 1 cut(s) 1258
ClaI ATCGAT 1 cut(s) 934
Csp6I GTAC 4 cut(s) 188, 1128, 1150, 1643
CviQI GTAC 4 cut(s) 188, 1128, 1150, 1643
DinI GGCGCC 1 cut(s) 251
DpnI GATC 7 cut(s) 22, 112, 195, 480, 834, 937, 1239
DpnII GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
DrdI GACNNNNNNGTC 1 cut(s) 287
DseDI GACNNNNNNGTC 1 cut(s) 287
EaeI YGGCCR 2 cut(s) 489, 1594
Eam1104I CTCTTC 1 cut(s) 1135
EarI CTCTTC 1 cut(s) 1135
Eco105I TACGTA 1 cut(s) 1274
Eco130I CCWWGG 2 cut(s) 316, 518
Eco147I AGGCCT 1 cut(s) 315
Eco24I GRGCYC 1 cut(s) 1613
Eco47I GGWCC 1 cut(s) 1258
Eco57I CTGAAG 3 cut(s) 732, 996, 1535
Eco88I CYCGRG 1 cut(s) 1254
EcoNI CCTNNNNNAGG 1 cut(s) 990
EcoRI GAATTC 1 cut(s) 1707
EcoRII CCWGG 4 cut(s) 1035, 1561, 1604, 1693
EcoT14I CCWWGG 2 cut(s) 316, 518
EcoT22I ATGCAT 2 cut(s) 1282, 1371
EcoT38I GRGCYC 1 cut(s) 1613
EgeI GGCGCC 1 cut(s) 251
EheI GGCGCC 1 cut(s) 251
ErhI CCWWGG 2 cut(s) 316, 518
FalI AAGNNNNNCTT 2 cut(s) 1293, 1325
FaqI GGGAC 1 cut(s) 1271
FauI CCCGC 2 cut(s) 328, 1236
FauNDI CATATG 2 cut(s) 504, 1371
Fnu4HI GCNGC 8 cut(s) 84, 138, 922, 1080, 1358, 1487, 1545, 1700
FokI GGATG 3 cut(s) 1059, 1259, 1480
FriOI GRGCYC 1 cut(s) 1613
Fsp4HI GCNGC 8 cut(s) 84, 138, 922, 1080, 1358, 1487, 1545, 1700
FspBI CTAG 5 cut(s) 191, 594, 972, 990, 1328
GlaI GCGC 4 cut(s) 136, 237, 251, 1191
GluI GCNGC 8 cut(s) 84, 138, 922, 1080, 1358, 1487, 1545, 1700
GsaI CCCAGC 1 cut(s) 1108
GsuI CTGGAG 2 cut(s) 1230, 1416
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 4 cut(s) 146, 315, 491, 1596
HapII CCGG 3 cut(s) 687, 900, 1622
HhaI GCGC 4 cut(s) 137, 238, 252, 1192
Hin1I GRCGYC 1 cut(s) 250
Hin6I GCGC 4 cut(s) 135, 236, 250, 1190
HinP1I GCGC 4 cut(s) 135, 236, 250, 1190
HincII GTYRAC 1 cut(s) 762
HindII GTYRAC 1 cut(s) 762
HinfI GANTC 9 cut(s) 73, 203, 305, 410, 532, 802, 1040, 1168, 1400
HpaI GTTAAC 1 cut(s) 762
HpaII CCGG 3 cut(s) 687, 900, 1622
HphI GGTGA 3 cut(s) 501, 635, 1170
Hpy166II GTNNAC 3 cut(s) 718, 762, 1178
Hpy8I GTNNAC 3 cut(s) 718, 762, 1178
HpyAV CCTTC 5 cut(s) 509, 635, 1369, 1514, 1661
HpyCH4III ACNGT 5 cut(s) 372, 681, 751, 1067, 1127
HpyCH4IV ACGT 2 cut(s) 1099, 1273
HpySE526I ACGT 2 cut(s) 1099, 1273
Hsp92I GRCGYC 1 cut(s) 250
HspAI GCGC 4 cut(s) 135, 236, 250, 1190
KasI GGCGCC 1 cut(s) 249
KspAI GTTAAC 1 cut(s) 762
Kzo9I GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
LmnI GCTCC 5 cut(s) 264, 772, 1336, 1635, 1707
Lsp1109I GCAGC 7 cut(s) 95, 149, 1066, 1344, 1473, 1531, 1686
LweI GCATC 3 cut(s) 1066, 1204, 1428
MaeI CTAG 5 cut(s) 191, 594, 972, 990, 1328
MaeII ACGT 2 cut(s) 1099, 1273
MaeIII GTNAC 5 cut(s) 411, 507, 734, 1161, 1455
MalI GATC 7 cut(s) 22, 112, 195, 480, 834, 937, 1239
MboI GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
MboII GAAGA 9 cut(s) 153, 156, 198, 311, 365, 930, 1152, 1673, 1676
MflI RGATCY 3 cut(s) 20, 110, 478
MhlI GDGCHC 1 cut(s) 1613
MlsI TGGCCA 1 cut(s) 1596
MluCI AATT 4 cut(s) 220, 981, 1025, 1707
MluNI TGGCCA 1 cut(s) 1596
Mly113I GGCGCC 1 cut(s) 250
MlyI GAGTC 3 cut(s) 314, 419, 1409
MmeI TCCRAC 2 cut(s) 750, 1294
Mox20I TGGCCA 1 cut(s) 1596
Mph1103I ATGCAT 2 cut(s) 1282, 1371
MroXI GAANNNNTTC 2 cut(s) 1066, 1503
MscI TGGCCA 1 cut(s) 1596
MseI TTAA 7 cut(s) 285, 404, 420, 654, 761, 795, 1347
MslI CAYNNNNRTG 4 cut(s) 354, 420, 1370, 1494
Msp20I TGGCCA 1 cut(s) 1596
MspA1I CMGCKG 2 cut(s) 1016, 1357
MspI CCGG 3 cut(s) 687, 900, 1622
MspR9I CCNGG 5 cut(s) 687, 1037, 1563, 1606, 1695
MvaI CCWGG 4 cut(s) 1037, 1563, 1606, 1695
NarI GGCGCC 1 cut(s) 250
NciI CCSGG 1 cut(s) 687
NdeI CATATG 2 cut(s) 504, 1371
NdeII GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
NlaIV GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
NmuCI GTSAC 5 cut(s) 411, 507, 734, 1161, 1455
NsiI ATGCAT 2 cut(s) 1282, 1371
NspI RCATGY 6 cut(s) 592, 632, 958, 1150, 1369, 1493
PaeI GCATGC 1 cut(s) 632
PagI TCATGA 2 cut(s) 606, 1384
PceI AGGCCT 1 cut(s) 315
PcsI WCGNNNNNNNCGW 1 cut(s) 1527
PdmI GAANNNNTTC 2 cut(s) 1066, 1503
PfeI GAWTC 6 cut(s) 73, 203, 532, 802, 1040, 1168
PflFI GACNNNGTC 1 cut(s) 820
PflMI CCANNNNNTGG 1 cut(s) 872
PkrI GCNGC 8 cut(s) 85, 139, 923, 1081, 1359, 1488, 1546, 1701
PleI GAGTC 3 cut(s) 313, 418, 1408
PluTI GGCGCC 1 cut(s) 253
PpsI GAGTC 3 cut(s) 313, 418, 1408
Ppu21I YACGTR 1 cut(s) 1274
PshBI ATTAAT 1 cut(s) 420
Psp6I CCWGG 4 cut(s) 1035, 1561, 1604, 1693
PspFI CCCAGC 1 cut(s) 1104
PspGI CCWGG 4 cut(s) 1035, 1561, 1604, 1693
PspN4I GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
PspPI GGNCC 1 cut(s) 1258
PstNI CAGNNNCTG 1 cut(s) 535
PsuI RGATCY 3 cut(s) 20, 110, 478
PsyI GACNNNGTC 1 cut(s) 820
PvuII CAGCTG 2 cut(s) 1016, 1357
RsaI GTAC 4 cut(s) 189, 1129, 1151, 1644
RsaNI GTAC 4 cut(s) 188, 1128, 1150, 1643
RseI CAYNNNNRTG 4 cut(s) 354, 420, 1370, 1494
SaqAI TTAA 7 cut(s) 285, 404, 420, 654, 761, 795, 1347
SatI GCNGC 8 cut(s) 84, 138, 922, 1080, 1358, 1487, 1545, 1700
Sau3AI GATC 7 cut(s) 20, 110, 193, 478, 832, 935, 1237
Sau96I GGNCC 1 cut(s) 1258
ScaI AGTACT 2 cut(s) 189, 1129
SchI GAGTC 3 cut(s) 314, 419, 1409
ScrFI CCNGG 5 cut(s) 687, 1037, 1563, 1606, 1695
SduI GDGCHC 1 cut(s) 1613
SfaNI GCATC 3 cut(s) 1066, 1204, 1428
SfoI GGCGCC 1 cut(s) 251
SinI GGWCC 1 cut(s) 1258
SmiMI CAYNNNNRTG 4 cut(s) 354, 420, 1370, 1494
SmlI CTYRAG 2 cut(s) 1090, 1395
SmoI CTYRAG 2 cut(s) 1090, 1395
SnaBI TACGTA 1 cut(s) 1274
SphI GCATGC 1 cut(s) 632
Sse9I AATT 4 cut(s) 220, 981, 1025, 1707
SseBI AGGCCT 1 cut(s) 315
SsiI CCGC 4 cut(s) 335, 647, 921, 1243
SspDI GGCGCC 1 cut(s) 249
SspI AATATT 1 cut(s) 245
SspMI CTAG 5 cut(s) 191, 594, 972, 990, 1328
StuI AGGCCT 1 cut(s) 315
StyD4I CCNGG 5 cut(s) 685, 1035, 1561, 1604, 1693
StyI CCWWGG 2 cut(s) 316, 518
TaaI ACNGT 5 cut(s) 372, 681, 751, 1067, 1127
TaiI ACGT 2 cut(s) 1102, 1276
TaqI TCGA 3 cut(s) 196, 934, 1659
TasI AATT 4 cut(s) 220, 981, 1025, 1707
TatI WGTACW 4 cut(s) 187, 1127, 1149, 1642
TauI GCSGC 1 cut(s) 924
TfiI GAWTC 6 cut(s) 73, 203, 532, 802, 1040, 1168
Tru1I TTAA 7 cut(s) 285, 404, 420, 654, 761, 795, 1347
Tru9I TTAA 7 cut(s) 285, 404, 420, 654, 761, 795, 1347
TscAI CASTG 3 cut(s) 55, 397, 1687
TseFI GTSAC 5 cut(s) 411, 507, 734, 1161, 1455
TseI GCWGC 7 cut(s) 83, 137, 1079, 1357, 1486, 1544, 1699
Tsp45I GTSAC 5 cut(s) 411, 507, 734, 1161, 1455
TspDTI ATGAA 8 cut(s) 474, 491, 595, 623, 1263, 1388, 1401, 1496
TspGWI ACGGA 1 cut(s) 567
TspRI CASTG 3 cut(s) 55, 397, 1687
Tth111I GACNNNGTC 1 cut(s) 820
Van91I CCANNNNNTGG 1 cut(s) 872
VpaK11BI GGWCC 1 cut(s) 1258
VspI ATTAAT 1 cut(s) 420
XagI CCTNNNNNAGG 1 cut(s) 990
XapI RAATTY 1 cut(s) 1707
XbaI TCTAGA 1 cut(s) 593
XceI RCATGY 6 cut(s) 592, 632, 958, 1150, 1369, 1493
XmnI GAANNNNTTC 2 cut(s) 1066, 1503
XspI CTAG 5 cut(s) 191, 594, 972, 990, 1328
ZrmI AGTACT 2 cut(s) 189, 1129
Zsp2I ATGCAT 2 cut(s) 1282, 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.