RchiOBHm_Chr6g0312051

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0005353
Physical Location & Seq
Forward (+)
68792340 .. 68796803
4464 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28068

Sequence Viewer

Length: 1701 bp
ATGAGCTTGTCCAAGAAAGGATCCTTTACGAATGACACAAAGCTAGGCGCTGCTGCAAGCAAGGCAACTACTTTAAATCCAAATGCAGCAGAGTTTGTTCCCTTTTCCCTCAGATCTCCTTCATCTGGAAGCACCAGCACACCTCAGGCATTTTCTTCATCTCGAACCTTTGGAAAAGCAGTATTAGATCGAACAGAGTCTTCCACCTCGAATAATTCTGATGACGAGGCCCACCAATATTGGCGCCACCAGCTCCCTGATGATATCACCCCTGACTTTAAGGTCATGGGAGAAGATGAGTCACCAGGTCTTGGAAACATCTCTTTGGCGGGATTGTCCTTGCATGATGACAGTGAAGCAACACACTTTCCTGCTTCTACAGGCAGTGGATACTTATATAATGACATTAATGGTAATAGCTTTTCTGAAAAGTTAAGAGTTGCTACATCCCCCTATGGGGATGATCTTTCCTCGCCCAGTTTCATGCACATGTCAACCAAGCCTTGGGATAAGCAGATTCTGAATAGCAATCAGCTTGTTAGCAATGGTCATGAGGGGTCTCTTTATGATGGCATTTCTAGACATGGATTCATGAATGATATATTGGGTGAGCAACCAGTTGTTGATGATAGCGAAATTAACCCTGCCGATTTTTTGGCTTCACAGTTCCCCGGGTTTTCCTCTCAGAGCCTTGCAGAAGTTTACTTAGCCAATGGTGGTGACTTAAACCTGACTATTGAGATGTTGACTCAGTTGGAGCTTCAAGTTGATGGTGGTTTTAATGAAAATATGAATCCAAAGACCTTGTCAGCTCCTGATCTTAGTTCAATGGACTTTCCTGCACTAACTCCAACAGATGGTCAGCATGGTCATCCAAAATATGTTGGAGACGATGATTTCCAGCAAAGTGGCAATCCATATCGAACTTCTGACAAGGACAGCATGCTGATGTTTAAGTCTAGCTCATCCATTCCGTCTAGAGGTTCAATAGATTTTGCTTCAGCTGTCAGGAAATTGGCGACTCAGGATTCTGGTGGATGGAAGTATGAGAGGAATGGGTCTGCTGATGCTGCTATTGGCTCAAGTAGAGCTTCCCATCTTGTAAATAGCACTTACAATACTGGGCATGGAAGAGCCATCTACAGTGATAGGTCGCAGACTCGTGGTTCAGCTCGGACTGCTCCTGTTTGGCTTGAAACTGGAGATGCTGTTGCAAATATGTATACCGATCTGCGGGAGGAAGCTCGTGATCATGCACGCCTACGGAATGCATACTTTGAGCAGGCACGACAAGCATACCTTGTTGGAAACAAGGCTCTAGCAAAGGAACTGAGTGTTAAAGGGCAGCTGCACAACATGCATATGAAGGCAGCTCATGGAAAAGCTCAAGAATCTATATATCGCCAGAGGAACCCAGAAATGCAATTCAATGGAAGACAGGAGAGGATGATAGACCTGCATGGACTTCACGTAAGTGAAGCTCTTCATAGGCTCAAGCATGAGCTGAGCATATTGAGGAACACTGCTAGAGCAGCAGAGACGGGTCTTCAGGTTTATATATGTGTTGGAACAGGCCACCACACCCGGGGTTCACGCACTCCAGCGAGGCTTCCAGTTGCTGTACAGCGTTACCTACTGGAAGAAGAGGGGCTCAACTACAATGAGCCACAGCCAGGGCTGCTTCGAGTTCTGATGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

566

Amino Acids

62.01

Weight (kDa)

5.83

Isoelectric Point (pI)

40.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 408 - 471 9.4e-19 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 281
Acc36I ACCTGC 1 cut(s) 1464
AccB1I GGYRCC 1 cut(s) 243
AccB7I CCANNNNNTGG 3 cut(s) 311, 504, 857
AccI GTMKAC 1 cut(s) 1223
AciI CCGC 2 cut(s) 329, 1234
AclWI GGATC 2 cut(s) 15, 28
AcuI CTGAAG 2 cut(s) 984, 1532
AcyI GRCGYC 1 cut(s) 244
AfaI GTAC 2 cut(s) 1623, 1697
AflIII ACRYGT 1 cut(s) 489
AgsI TTSAA 5 cut(s) 764, 828, 987, 1196, 1429
AjnI CCWGG 2 cut(s) 304, 1672
AjuI GAANNNNNNNTTGG 2 cut(s) 587, 619
AleI CACNNNNGTG 1 cut(s) 1473
Alw26I GTCTC 3 cut(s) 564, 882, 1532
AlwI GGATC 2 cut(s) 15, 28
AlwNI CAGNNNCTG 3 cut(s) 520, 815, 1619
Ama87I CYCGRG 2 cut(s) 671, 1584
AoxI GGCC 2 cut(s) 228, 1573
ApeKI GCWGC 9 cut(s) 50, 53, 86, 1070, 1345, 1348, 1370, 1532, 1678
ArsI GACNNNNNNTTYG 2 cut(s) 791, 823
AseI ATTAAT 1 cut(s) 408
Asp700I GAANNNNTTC 1 cut(s) 1482
AspLEI GCGC 2 cut(s) 50, 246
AspS9I GGNCC 1 cut(s) 229
AsuC2I CCSGG 4 cut(s) 672, 673, 1585, 1586
AsuHPI GGTGA 4 cut(s) 259, 294, 620, 731
AvaI CYCGRG 2 cut(s) 671, 1584
AxyI CCTNAGG 1 cut(s) 144
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 243
BanII GRGCYC 1 cut(s) 1653
BauI CACGAG 2 cut(s) 1161, 1245
BbsI GAAGAC 3 cut(s) 192, 1441, 1538
BbvI GCAGC 9 cut(s) 37, 40, 98, 1057, 1335, 1357, 1382, 1544, 1665
BccI CCATC 6 cut(s) 563, 764, 851, 1032, 1104, 1145
BciT130I CCWGG 2 cut(s) 306, 1674
BciVI GTATCC 1 cut(s) 383
BclI TGATCA 1 cut(s) 1249
BcnI CCSGG 4 cut(s) 672, 673, 1585, 1586
BcoDI GTCTC 3 cut(s) 564, 882, 1532
BfaI CTAG 6 cut(s) 44, 579, 960, 978, 1319, 1527
BfmI CTRYAG 2 cut(s) 378, 1141
BfoI RGCGCY 2 cut(s) 51, 247
BfuAI ACCTGC 1 cut(s) 1464
BfuI GTATCC 1 cut(s) 383
BglII AGATCT 1 cut(s) 113
BisI GCNGC 9 cut(s) 51, 54, 87, 1071, 1346, 1349, 1371, 1533, 1679
BlpI GCTNAGC 1 cut(s) 1505
BlsI GCNGC 9 cut(s) 52, 55, 88, 1072, 1347, 1350, 1372, 1534, 1680
Bme1390I CCNGG 6 cut(s) 306, 672, 673, 1585, 1586, 1674
BmeT110I CYCGRG 2 cut(s) 671, 1584
BmgT120I GGNCC 1 cut(s) 229
BmiI GGNNCC 3 cut(s) 22, 245, 1412
BmrFI CCNGG 6 cut(s) 306, 672, 673, 1585, 1586, 1674
BmrI ACTGGG 2 cut(s) 471, 1131
BmsI GCATC 2 cut(s) 1057, 1195
BmuI ACTGGG 2 cut(s) 471, 1131
BpiI GAAGAC 3 cut(s) 192, 1441, 1538
BpmI CTGGAG 2 cut(s) 1221, 1584
Bpu1102I GCTNAGC 1 cut(s) 1505
BpuEI CTTGAG 3 cut(s) 1066, 1371, 1478
BpuMI CCSGG 4 cut(s) 672, 673, 1585, 1586
BsaAI YACGTR 1 cut(s) 1471
BsaHI GRCGYC 1 cut(s) 244
BsaI GGTCTC 1 cut(s) 564
BsaJI CCNNGG 6 cut(s) 503, 670, 671, 1584, 1585, 1673
BsaXI ACNNNNNCTCC 2 cut(s) 1194, 1224
Bse1I ACTGG 6 cut(s) 477, 617, 1126, 1204, 1613, 1641
Bse21I CCTNAGG 1 cut(s) 144
Bse3DI GCAATG 1 cut(s) 550
BseBI CCWGG 2 cut(s) 306, 1674
BseDI CCNNGG 6 cut(s) 503, 670, 671, 1584, 1585, 1673
BseGI GGATG 6 cut(s) 446, 466, 871, 965, 1043, 1452
BseMI GCAATG 1 cut(s) 550
BseMII CTCAG 7 cut(s) 124, 158, 698, 764, 1037, 1322, 1496
BseNI ACTGG 6 cut(s) 477, 617, 1126, 1204, 1613, 1641
BseXI GCAGC 9 cut(s) 37, 40, 98, 1057, 1335, 1357, 1382, 1544, 1665
BsgI GTGCAG 2 cut(s) 825, 1334
BshFI GGCC 2 cut(s) 230, 1575
BshNI GGYRCC 1 cut(s) 243
BsiHKCI CYCGRG 2 cut(s) 671, 1584
BsiSI CCGG 2 cut(s) 672, 1585
BsmAI GTCTC 3 cut(s) 564, 882, 1532
BsmBI CGTCTC 2 cut(s) 882, 1532
BsmI GAATGC 1 cut(s) 1273
BsnI GGCC 2 cut(s) 230, 1575
Bso31I GGTCTC 1 cut(s) 564
BsoBI CYCGRG 2 cut(s) 671, 1584
Bsp1286I GDGCHC 1 cut(s) 1653
Bsp1407I TGTACA 1 cut(s) 1621
Bsp143I GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
Bsp1720I GCTNAGC 1 cut(s) 1505
BspACI CCGC 2 cut(s) 329, 1234
BspANI GGCC 2 cut(s) 230, 1575
BspCNI CTCAG 7 cut(s) 123, 157, 697, 763, 1036, 1323, 1497
BspHI TCATGA 2 cut(s) 550, 591
BspLI GGNNCC 3 cut(s) 22, 245, 1412
BspMI ACCTGC 1 cut(s) 1464
BspPI GGATC 2 cut(s) 15, 28
BspQI GCTCTTC 2 cut(s) 1126, 1488
BspT107I GGYRCC 1 cut(s) 243
BspTNI GGTCTC 1 cut(s) 564
BsrDI GCAATG 1 cut(s) 550
BsrGI TGTACA 1 cut(s) 1621
BsrI ACTGG 6 cut(s) 477, 617, 1126, 1204, 1613, 1641
BssECI CCNNGG 6 cut(s) 503, 670, 671, 1584, 1585, 1673
BssMI GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
BssNAI GTATAC 1 cut(s) 1224
BssNI GRCGYC 1 cut(s) 244
BssSI CACGAG 2 cut(s) 1161, 1245
BssT1I CCWWGG 1 cut(s) 503
Bst1107I GTATAC 1 cut(s) 1224
Bst2BI CACGAG 2 cut(s) 1161, 1245
Bst2UI CCWGG 2 cut(s) 306, 1674
Bst4CI ACNGT 3 cut(s) 353, 666, 1145
Bst6I CTCTTC 3 cut(s) 1126, 1488, 1638
BstACI GRCGYC 1 cut(s) 244
BstAPI GCANNNNNTGC 1 cut(s) 1357
BstAUI TGTACA 1 cut(s) 1621
BstBAI YACGTR 1 cut(s) 1471
BstC8I GCNNGC 4 cut(s) 58, 944, 1258, 1284
BstDEI CTNAG 9 cut(s) 110, 144, 684, 706, 750, 821, 1023, 1331, 1505
BstF5I GGATG 6 cut(s) 446, 466, 871, 965, 1043, 1452
BstH2I RGCGCY 2 cut(s) 51, 247
BstHHI GCGC 2 cut(s) 50, 246
BstKTI GATC 7 cut(s) 23, 116, 190, 466, 820, 1231, 1252
BstMAI GTCTC 3 cut(s) 564, 882, 1532
BstMBI GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
BstMWI GCNNNNNNNGC 8 cut(s) 62, 250, 1070, 1178, 1292, 1357, 1532, 1678
BstNI CCWGG 2 cut(s) 306, 1674
BstNSI RCATGY 3 cut(s) 493, 946, 1360
BstSCI CCNGG 6 cut(s) 304, 670, 671, 1583, 1584, 1672
BstSFI CTRYAG 2 cut(s) 378, 1141
BstV1I GCAGC 9 cut(s) 37, 40, 98, 1057, 1335, 1357, 1382, 1544, 1665
BstV2I GAAGAC 3 cut(s) 192, 1441, 1538
BstX2I RGATCY 2 cut(s) 20, 113
BstXI CCANNNNNNTGG 1 cut(s) 908
BstYI RGATCY 2 cut(s) 20, 113
BstZ17I GTATAC 1 cut(s) 1224
Bsu36I CCTNAGG 1 cut(s) 144
BsuI GTATCC 1 cut(s) 383
BsuRI GGCC 2 cut(s) 230, 1575
BtsCI GGATG 6 cut(s) 446, 466, 871, 965, 1043, 1452
BtsI GCAGTG 2 cut(s) 391, 1521
BtsIMutI CAGTG 4 cut(s) 358, 391, 1150, 1521
BveI ACCTGC 1 cut(s) 1464
Cac8I GCNNGC 4 cut(s) 58, 944, 1258, 1284
CaiI CAGNNNCTG 3 cut(s) 520, 815, 1619
CciI TCATGA 2 cut(s) 550, 591
CfoI GCGC 2 cut(s) 50, 246
Cfr13I GGNCC 1 cut(s) 229
Cfr9I CCCGGG 2 cut(s) 671, 1584
CsiI ACCWGGT 1 cut(s) 304
Csp6I GTAC 2 cut(s) 1622, 1696
CspCI CAANNNNNGTGG 2 cut(s) 221, 256
CviQI GTAC 2 cut(s) 1622, 1696
DdeI CTNAG 9 cut(s) 110, 144, 684, 706, 750, 821, 1023, 1331, 1505
DinI GGCGCC 1 cut(s) 245
DpnI GATC 7 cut(s) 22, 115, 189, 465, 819, 1230, 1251
DpnII GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
DraI TTTAAA 1 cut(s) 75
DrdI GACNNNNNNGTC 1 cut(s) 281
DseDI GACNNNNNNGTC 1 cut(s) 281
Eam1104I CTCTTC 3 cut(s) 1126, 1488, 1638
EarI CTCTTC 3 cut(s) 1126, 1488, 1638
Eco130I CCWWGG 1 cut(s) 503
Eco24I GRGCYC 1 cut(s) 1653
Eco31I GGTCTC 1 cut(s) 564
Eco32I GATATC 1 cut(s) 265
Eco57I CTGAAG 2 cut(s) 984, 1532
Eco81I CCTNAGG 1 cut(s) 144
Eco88I CYCGRG 2 cut(s) 671, 1584
EcoRII CCWGG 2 cut(s) 304, 1672
EcoRV GATATC 1 cut(s) 265
EcoT14I CCWWGG 1 cut(s) 503
EcoT22I ATGCAT 2 cut(s) 1273, 1362
EcoT38I GRGCYC 1 cut(s) 1653
EgeI GGCGCC 1 cut(s) 245
EheI GGCGCC 1 cut(s) 245
ErhI CCWWGG 1 cut(s) 503
Esp3I CGTCTC 2 cut(s) 882, 1532
FalI AAGNNNNNCTT 4 cut(s) 1075, 1107, 1284, 1316
FauI CCCGC 2 cut(s) 322, 1227
FauNDI CATATG 1 cut(s) 1362
FbaI TGATCA 1 cut(s) 1249
FblI GTMKAC 1 cut(s) 1223
Fnu4HI GCNGC 9 cut(s) 51, 54, 87, 1071, 1346, 1349, 1371, 1533, 1679
FokI GGATG 6 cut(s) 433, 473, 858, 952, 1050, 1459
FriOI GRGCYC 1 cut(s) 1653
Fsp4HI GCNGC 9 cut(s) 51, 54, 87, 1071, 1346, 1349, 1371, 1533, 1679
FspBI CTAG 6 cut(s) 44, 579, 960, 978, 1319, 1527
GlaI GCGC 2 cut(s) 49, 245
GluI GCNGC 9 cut(s) 51, 54, 87, 1071, 1346, 1349, 1371, 1533, 1679
GsuI CTGGAG 2 cut(s) 1221, 1584
HaeII RGCGCY 2 cut(s) 51, 247
HaeIII GGCC 2 cut(s) 230, 1575
HapII CCGG 2 cut(s) 672, 1585
HhaI GCGC 2 cut(s) 50, 246
Hin1I GRCGYC 1 cut(s) 244
Hin6I GCGC 2 cut(s) 48, 244
HinP1I GCGC 2 cut(s) 48, 244
HincII GTYRAC 2 cut(s) 495, 747
HindII GTYRAC 2 cut(s) 495, 747
HpaII CCGG 2 cut(s) 672, 1585
HphI GGTGA 4 cut(s) 259, 294, 620, 731
Hpy166II GTNNAC 5 cut(s) 495, 703, 747, 1224, 1592
Hpy188I TCNGA 8 cut(s) 113, 220, 427, 522, 687, 931, 1176, 1692
Hpy8I GTNNAC 5 cut(s) 495, 703, 747, 1224, 1592
HpyAV CCTTC 2 cut(s) 129, 1360
HpyCH4III ACNGT 3 cut(s) 353, 666, 1145
HpyCH4IV ACGT 1 cut(s) 1470
HpyF10VI GCNNNNNNNGC 8 cut(s) 62, 250, 1070, 1178, 1292, 1357, 1532, 1678
HpyF3I CTNAG 9 cut(s) 110, 144, 684, 706, 750, 821, 1023, 1331, 1505
HpySE526I ACGT 1 cut(s) 1470
Hsp92I GRCGYC 1 cut(s) 244
HspAI GCGC 2 cut(s) 48, 244
KasI GGCGCC 1 cut(s) 243
Ksp22I TGATCA 1 cut(s) 1249
Kzo9I GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
LguI GCTCTTC 2 cut(s) 1126, 1488
LmnI GCTCC 4 cut(s) 258, 757, 817, 1186
Lsp1109I GCAGC 9 cut(s) 37, 40, 98, 1057, 1335, 1357, 1382, 1544, 1665
LweI GCATC 2 cut(s) 1057, 1195
MabI ACCWGGT 1 cut(s) 304
MaeI CTAG 6 cut(s) 44, 579, 960, 978, 1319, 1527
MaeII ACGT 1 cut(s) 1470
MaeIII GTNAC 3 cut(s) 300, 719, 1628
MalI GATC 7 cut(s) 22, 115, 189, 465, 819, 1230, 1251
MboI GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
MboII GAAGA 9 cut(s) 147, 192, 305, 1143, 1446, 1475, 1538, 1652, 1655
MflI RGATCY 2 cut(s) 20, 113
MhlI GDGCHC 1 cut(s) 1653
MluCI AATT 4 cut(s) 214, 636, 1013, 1424
Mly113I GGCGCC 1 cut(s) 244
MlyI GAGTC 5 cut(s) 206, 308, 742, 1015, 1153
MmeI TCCRAC 5 cut(s) 735, 865, 875, 1285, 1546
Mph1103I ATGCAT 2 cut(s) 1273, 1362
MroXI GAANNNNTTC 1 cut(s) 1482
MseI TTAA 9 cut(s) 74, 279, 408, 434, 639, 725, 780, 954, 1338
MslI CAYNNNNRTG 4 cut(s) 488, 947, 1361, 1473
MspA1I CMGCKG 2 cut(s) 1004, 1348
MspI CCGG 2 cut(s) 672, 1585
MspR9I CCNGG 6 cut(s) 306, 672, 673, 1585, 1586, 1674
Mva1269I GAATGC 1 cut(s) 1273
MvaI CCWGG 2 cut(s) 306, 1674
MwoI GCNNNNNNNGC 8 cut(s) 62, 250, 1070, 1178, 1292, 1357, 1532, 1678
NarI GGCGCC 1 cut(s) 244
NciI CCSGG 4 cut(s) 672, 673, 1585, 1586
NdeI CATATG 1 cut(s) 1362
NdeII GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
NlaIV GGNNCC 3 cut(s) 22, 245, 1412
NmuCI GTSAC 2 cut(s) 300, 719
NsiI ATGCAT 2 cut(s) 1273, 1362
NspI RCATGY 3 cut(s) 493, 946, 1360
OliI CACNNNNGTG 1 cut(s) 1473
PaeI GCATGC 1 cut(s) 946
PagI TCATGA 2 cut(s) 550, 591
PciI ACATGT 1 cut(s) 489
PciSI GCTCTTC 2 cut(s) 1126, 1488
PctI GAATGC 1 cut(s) 1273
PdmI GAANNNNTTC 1 cut(s) 1482
PfeI GAWTC 5 cut(s) 517, 588, 793, 1028, 1391
PflFI GACNNNGTC 1 cut(s) 805
PflMI CCANNNNNTGG 3 cut(s) 311, 504, 857
PkrI GCNGC 9 cut(s) 52, 55, 88, 1072, 1347, 1350, 1372, 1534, 1680
PleI GAGTC 5 cut(s) 205, 307, 742, 1015, 1153
PluTI GGCGCC 1 cut(s) 247
PpsI GAGTC 5 cut(s) 205, 307, 742, 1015, 1153
Ppu21I YACGTR 1 cut(s) 1471
PscI ACATGT 1 cut(s) 489
PshBI ATTAAT 1 cut(s) 408
Psp6I CCWGG 2 cut(s) 304, 1672
PspGI CCWGG 2 cut(s) 304, 1672
PspN4I GGNNCC 3 cut(s) 22, 245, 1412
PspPI GGNCC 1 cut(s) 229
PstNI CAGNNNCTG 3 cut(s) 520, 815, 1619
PsuI RGATCY 2 cut(s) 20, 113
PsyI GACNNNGTC 1 cut(s) 805
PvuII CAGCTG 2 cut(s) 1004, 1348
RsaI GTAC 2 cut(s) 1623, 1697
RsaNI GTAC 2 cut(s) 1622, 1696
RseI CAYNNNNRTG 4 cut(s) 488, 947, 1361, 1473
SapI GCTCTTC 2 cut(s) 1126, 1488
SaqAI TTAA 9 cut(s) 74, 279, 408, 434, 639, 725, 780, 954, 1338
SatI GCNGC 9 cut(s) 51, 54, 87, 1071, 1346, 1349, 1371, 1533, 1679
Sau3AI GATC 7 cut(s) 20, 113, 187, 463, 817, 1228, 1249
Sau96I GGNCC 1 cut(s) 229
SchI GAGTC 5 cut(s) 206, 308, 742, 1015, 1153
ScrFI CCNGG 6 cut(s) 306, 672, 673, 1585, 1586, 1674
SduI GDGCHC 1 cut(s) 1653
SexAI ACCWGGT 1 cut(s) 304
SfaNI GCATC 2 cut(s) 1057, 1195
SfcI CTRYAG 2 cut(s) 378, 1141
SfoI GGCGCC 1 cut(s) 245
SmaI CCCGGG 2 cut(s) 673, 1586
SmiMI CAYNNNNRTG 4 cut(s) 488, 947, 1361, 1473
SmlI CTYRAG 3 cut(s) 1081, 1386, 1493
SmoI CTYRAG 3 cut(s) 1081, 1386, 1493
SphI GCATGC 1 cut(s) 946
Sse9I AATT 4 cut(s) 214, 636, 1013, 1424
SsiI CCGC 2 cut(s) 329, 1234
SspDI GGCGCC 1 cut(s) 243
SspI AATATT 1 cut(s) 239
SspMI CTAG 6 cut(s) 44, 579, 960, 978, 1319, 1527
StyD4I CCNGG 6 cut(s) 304, 670, 671, 1583, 1584, 1672
StyI CCWWGG 1 cut(s) 503
TaaI ACNGT 3 cut(s) 353, 666, 1145
TaiI ACGT 1 cut(s) 1473
TaqI TCGA 5 cut(s) 163, 190, 209, 922, 1684
TasI AATT 4 cut(s) 214, 636, 1013, 1424
TatI WGTACW 2 cut(s) 1621, 1695
TfiI GAWTC 5 cut(s) 517, 588, 793, 1028, 1391
Tru1I TTAA 9 cut(s) 74, 279, 408, 434, 639, 725, 780, 954, 1338
Tru9I TTAA 9 cut(s) 74, 279, 408, 434, 639, 725, 780, 954, 1338
TscAI CASTG 4 cut(s) 358, 391, 1150, 1528
TseFI GTSAC 2 cut(s) 300, 719
TseI GCWGC 9 cut(s) 50, 53, 86, 1070, 1345, 1348, 1370, 1532, 1678
Tsp45I GTSAC 2 cut(s) 300, 719
TspDTI ATGAA 9 cut(s) 111, 147, 472, 580, 608, 798, 806, 1379, 1475
TspGWI ACGGA 2 cut(s) 963, 1279
TspMI CCCGGG 2 cut(s) 671, 1584
TspRI CASTG 4 cut(s) 358, 391, 1150, 1528
Tth111I GACNNNGTC 1 cut(s) 805
Van91I CCANNNNNTGG 3 cut(s) 311, 504, 857
VspI ATTAAT 1 cut(s) 408
XbaI TCTAGA 2 cut(s) 578, 977
XceI RCATGY 3 cut(s) 493, 946, 1360
XmaI CCCGGG 2 cut(s) 671, 1584
XmiI GTMKAC 1 cut(s) 1223
XmnI GAANNNNTTC 1 cut(s) 1482
XspI CTAG 6 cut(s) 44, 579, 960, 978, 1319, 1527
Zsp2I ATGCAT 2 cut(s) 1273, 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.