Rroxscaffold_7G00157090

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0005353
Physical Location & Seq
Reverse (-)
910507 .. 914882
4376 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00157090.1

Sequence Viewer

Length: 1710 bp
ATGAGCTTGTCCAAGAAAGGATCCTTTCCGAATGACACAAAGCTAGGCGCTGCTGCAAGCAAGGCAACTACCTTAAATCCAAATGCAGCAGAGTTTGTTCCCTTCTCCCTCAGATCTCCTTCATCTGGAAGCACCAGCACAGCTCAGGCGGCAACAACATTTTCTTCATCTGGAACCTTTGGAAAAGCAGTATTAGTTCGAACAGAGTCTTCCACCTCGAATAATTCTGATGACGAGGCCCACCAATATTGGCGCCACCAGCTCCCTGATGATATCACCCCTGACTTTAAGGTCATGGGAGAAGACGAGTCGCCAGGTCTTGGAAACATCTCTTTGGCGGGATTGTCCTTGCATGATGACAGTGAAGCAACACAGTTTCCTGCTTCTACAGGCAGTGGATACTTATATAATGACATTAATGGTAATAGCTTTTCTGAAAAGTTAAGAGTTGCTACATCCCCCTATGGGGATGATCTTTCCTCCCCCAGTTTCATGCACATGTCAACCAAGCCTTGGGATAGGCAGATTCTGAATAGCAATCAGCTTGTTAGCAATGGTCATGAGGGGTCTCTTTATGATGGCATTTCTAGACATGGATTCATGAATGATATATTGCGTGAGCAACCAGTTGTTGATGATAGCGAAATTAACCCTGCCGAATTTTTGGCTTCACAGTTCCCCGGGTTTTCCGCTCAGAGCCTTGCAGAAGTTTACTTTGCCAATGGTGGTGACTTAAACCTGACTATTGATATGTTGACTCAGTTGGAGCTTCAAGCTGATGGTGGTTTTAATGAAAATATGAATCCAAAGACCCTGTCAGCTCCTGATCTTAGTTCGATGGACTTTCCTGCACTAACTCCAACAGATGGTCAGCATGGTCATCCAAAATATGCTGGAGACGATGATTTCCAGCAAAGTGGCAATCCGTATCGAAATTCTGACAAGGACAGCATGCTGATGTTTAAGTCTAGCTCATCCATTCCGTCTAGAGGTTCAATAGATTTTGCTTCAGCTGTCAGGAAATTGGCGACTCAGGATTCTGGTGGATGGAAGTATGAGAGGAATGGGTCTGCTGATGCCGCTATTGGCTCAAGTAGAGCTGCCCATCTTGTAAATAGCACTTACAATACTGGGCATGGAAGAGCCATCTACAGTGATAGGTCCCAGACTCGTGGTTCAGCTCGGACTGCTCCTGTTTGGCTTGAAACTGGAGATGCTGTTGCAAATATGTATACCGACCTGCGGGAGGAAGCTCGTGATCATGCACGCCTACGGAATGCATACTTTGAGCAGGCACGACAAGCATACCTTGTTGGAAACAAGGCTCTAGCAAAGGAACTGAGTGTTAAAGGGCAGCTGCACAACATGCATATGAAGGCAGCTCATGGCAAAGCTCAAGAATCTATATATCGCCAGAGGAACCCAGAAATGCAAGGCAATGGAAGACAGGAGAGGATGATAGACCTGCATGGACTTCACGTAAGTGAAGCTCTTCATAGGCTCAAGCATGAGCTGAGCATATTGAGGAACACTGCCAGAGCAGCAGAGACGGGTCTTCAGGTTTATATATGTGTTGGAACAGGCCACCACACCCGGGGTTCACGCACTCCGGCGAGGCTTCCAGTTGCTGTACAGCGTTACCTACTGGAAGAAGAGGGGCTCAACTACAATGAGCCACAGCCAGGGCTGCTTCGAGTTCTGATGTACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

569

Amino Acids

62.12

Weight (kDa)

5.86

Isoelectric Point (pI)

40.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 411 - 474 9.4e-19 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 290
Acc36I ACCTGC 2 cut(s) 1248, 1473
AccB1I GGYRCC 1 cut(s) 252
AccB7I CCANNNNNTGG 3 cut(s) 320, 513, 866
AccBSI CCGCTC 1 cut(s) 692
AccI GTMKAC 1 cut(s) 1232
AciI CCGC 5 cut(s) 149, 338, 690, 1080, 1243
AclWI GGATC 2 cut(s) 15, 28
AcsI RAATTY 2 cut(s) 659, 934
AcuI CTGAAG 2 cut(s) 993, 1541
AcyI GRCGYC 1 cut(s) 253
AfaI GTAC 2 cut(s) 1632, 1706
AflIII ACRYGT 1 cut(s) 498
AgsI TTSAA 3 cut(s) 773, 996, 1205
AjnI CCWGG 2 cut(s) 313, 1681
AleI CACNNNNGTG 1 cut(s) 1482
Alw26I GTCTC 3 cut(s) 573, 891, 1541
AlwI GGATC 2 cut(s) 15, 28
AlwNI CAGNNNCTG 3 cut(s) 529, 824, 1628
Ama87I CYCGRG 2 cut(s) 680, 1593
AoxI GGCC 2 cut(s) 237, 1582
ApeKI GCWGC 9 cut(s) 50, 53, 86, 1100, 1354, 1357, 1379, 1541, 1687
ApoI RAATTY 2 cut(s) 659, 934
ArsI GACNNNNNNTTYG 2 cut(s) 800, 832
AseI ATTAAT 1 cut(s) 417
Asp700I GAANNNNTTC 1 cut(s) 1491
AspLEI GCGC 2 cut(s) 50, 255
AspS9I GGNCC 2 cut(s) 238, 1161
AsuC2I CCSGG 4 cut(s) 681, 682, 1594, 1595
AsuHPI GGTGA 2 cut(s) 268, 740
AsuII TTCGAA 1 cut(s) 199
AvaI CYCGRG 2 cut(s) 680, 1593
AvaII GGWCC 1 cut(s) 1161
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 252
BanII GRGCYC 1 cut(s) 1662
BauI CACGAG 2 cut(s) 1170, 1254
BbsI GAAGAC 4 cut(s) 201, 309, 1450, 1547
BbvI GCAGC 9 cut(s) 37, 40, 98, 1087, 1344, 1366, 1391, 1553, 1674
BccI CCATC 7 cut(s) 572, 773, 832, 860, 1041, 1113, 1154
BciT130I CCWGG 2 cut(s) 315, 1683
BciVI GTATCC 1 cut(s) 392
BclI TGATCA 1 cut(s) 1258
BcnI CCSGG 4 cut(s) 681, 682, 1594, 1595
BcoDI GTCTC 3 cut(s) 573, 891, 1541
BfaI CTAG 5 cut(s) 44, 588, 969, 987, 1328
BfmI CTRYAG 2 cut(s) 387, 1150
BfoI RGCGCY 2 cut(s) 51, 256
BfuAI ACCTGC 2 cut(s) 1248, 1473
BfuI GTATCC 1 cut(s) 392
BglII AGATCT 1 cut(s) 113
BlpI GCTNAGC 1 cut(s) 1514
Bme1390I CCNGG 6 cut(s) 315, 681, 682, 1594, 1595, 1683
Bme18I GGWCC 1 cut(s) 1161
BmeT110I CYCGRG 2 cut(s) 680, 1593
BmgT120I GGNCC 2 cut(s) 238, 1161
BmiI GGNNCC 5 cut(s) 22, 175, 254, 1163, 1421
BmrFI CCNGG 6 cut(s) 315, 681, 682, 1594, 1595, 1683
BmrI ACTGGG 2 cut(s) 480, 1140
BmsI GCATC 2 cut(s) 1066, 1204
BmuI ACTGGG 2 cut(s) 480, 1140
BpiI GAAGAC 4 cut(s) 201, 309, 1450, 1547
BpmI CTGGAG 2 cut(s) 915, 1230
Bpu10I CCTNAGC 1 cut(s) 144
Bpu1102I GCTNAGC 1 cut(s) 1514
Bpu14I TTCGAA 1 cut(s) 199
BpuEI CTTGAG 3 cut(s) 1075, 1380, 1487
BpuMI CCSGG 4 cut(s) 681, 682, 1594, 1595
BsaAI YACGTR 1 cut(s) 1480
BsaHI GRCGYC 1 cut(s) 253
BsaI GGTCTC 1 cut(s) 573
BsaJI CCNNGG 6 cut(s) 512, 679, 680, 1593, 1594, 1682
BsaXI ACNNNNNCTCC 2 cut(s) 1203, 1233
Bse1I ACTGG 6 cut(s) 486, 626, 1135, 1213, 1622, 1650
Bse3DI GCAATG 2 cut(s) 559, 1444
BseBI CCWGG 2 cut(s) 315, 1683
BseDI CCNNGG 6 cut(s) 512, 679, 680, 1593, 1594, 1682
BseGI GGATG 6 cut(s) 455, 475, 880, 974, 1052, 1461
BseMI GCAATG 2 cut(s) 559, 1444
BseMII CTCAG 7 cut(s) 124, 158, 707, 773, 1046, 1331, 1505
BseNI ACTGG 6 cut(s) 486, 626, 1135, 1213, 1622, 1650
BseXI GCAGC 9 cut(s) 37, 40, 98, 1087, 1344, 1366, 1391, 1553, 1674
BsgI GTGCAG 2 cut(s) 834, 1343
BshFI GGCC 2 cut(s) 239, 1584
BshNI GGYRCC 1 cut(s) 252
BsiHKCI CYCGRG 2 cut(s) 680, 1593
BsiSI CCGG 3 cut(s) 681, 1594, 1610
BslFI GGGAC 1 cut(s) 1147
BsmAI GTCTC 3 cut(s) 573, 891, 1541
BsmBI CGTCTC 2 cut(s) 891, 1541
BsmFI GGGAC 1 cut(s) 1147
BsmI GAATGC 1 cut(s) 1282
BsnI GGCC 2 cut(s) 239, 1584
Bso31I GGTCTC 1 cut(s) 573
BsoBI CYCGRG 2 cut(s) 680, 1593
Bsp119I TTCGAA 1 cut(s) 199
Bsp1286I GDGCHC 1 cut(s) 1662
Bsp1407I TGTACA 1 cut(s) 1630
Bsp143I GATC 5 cut(s) 20, 113, 472, 826, 1258
Bsp1720I GCTNAGC 1 cut(s) 1514
BspACI CCGC 5 cut(s) 149, 338, 690, 1080, 1243
BspANI GGCC 2 cut(s) 239, 1584
BspCNI CTCAG 7 cut(s) 123, 157, 706, 772, 1045, 1332, 1506
BspHI TCATGA 2 cut(s) 559, 600
BspLI GGNNCC 5 cut(s) 22, 175, 254, 1163, 1421
BspMI ACCTGC 2 cut(s) 1248, 1473
BspPI GGATC 2 cut(s) 15, 28
BspQI GCTCTTC 2 cut(s) 1135, 1497
BspT104I TTCGAA 1 cut(s) 199
BspT107I GGYRCC 1 cut(s) 252
BspTNI GGTCTC 1 cut(s) 573
BsrBI CCGCTC 1 cut(s) 692
BsrDI GCAATG 2 cut(s) 559, 1444
BsrGI TGTACA 1 cut(s) 1630
BsrI ACTGG 6 cut(s) 486, 626, 1135, 1213, 1622, 1650
BssECI CCNNGG 6 cut(s) 512, 679, 680, 1593, 1594, 1682
BssMI GATC 5 cut(s) 20, 113, 472, 826, 1258
BssNAI GTATAC 1 cut(s) 1233
BssNI GRCGYC 1 cut(s) 253
BssSI CACGAG 2 cut(s) 1170, 1254
BssT1I CCWWGG 1 cut(s) 512
Bst1107I GTATAC 1 cut(s) 1233
Bst2BI CACGAG 2 cut(s) 1170, 1254
Bst2UI CCWGG 2 cut(s) 315, 1683
Bst4CI ACNGT 4 cut(s) 362, 375, 675, 1154
Bst6I CTCTTC 3 cut(s) 1135, 1497, 1647
BstACI GRCGYC 1 cut(s) 253
BstAPI GCANNNNNTGC 1 cut(s) 1366
BstAUI TGTACA 1 cut(s) 1630
BstBAI YACGTR 1 cut(s) 1480
BstBI TTCGAA 1 cut(s) 199
BstC8I GCNNGC 4 cut(s) 58, 953, 1267, 1293
BstDEI CTNAG 8 cut(s) 110, 144, 693, 759, 830, 1032, 1340, 1514
BstENI CCTNNNNNAGG 1 cut(s) 1244
BstF5I GGATG 6 cut(s) 455, 475, 880, 974, 1052, 1461
BstH2I RGCGCY 2 cut(s) 51, 256
BstHHI GCGC 2 cut(s) 50, 255
BstKTI GATC 5 cut(s) 23, 116, 475, 829, 1261
BstMAI GTCTC 3 cut(s) 573, 891, 1541
BstMBI GATC 5 cut(s) 20, 113, 472, 826, 1258
BstMWI GCNNNNNNNGC 9 cut(s) 62, 149, 259, 1079, 1187, 1301, 1366, 1541, 1687
BstNI CCWGG 2 cut(s) 315, 1683
BstNSI RCATGY 3 cut(s) 502, 955, 1369
BstSCI CCNGG 6 cut(s) 313, 679, 680, 1592, 1593, 1681
BstSFI CTRYAG 2 cut(s) 387, 1150
BstV1I GCAGC 9 cut(s) 37, 40, 98, 1087, 1344, 1366, 1391, 1553, 1674
BstV2I GAAGAC 4 cut(s) 201, 309, 1450, 1547
BstX2I RGATCY 2 cut(s) 20, 113
BstXI CCANNNNNNTGG 2 cut(s) 917, 1172
BstYI RGATCY 2 cut(s) 20, 113
BstZ17I GTATAC 1 cut(s) 1233
BsuI GTATCC 1 cut(s) 392
BsuRI GGCC 2 cut(s) 239, 1584
BtsCI GGATG 6 cut(s) 455, 475, 880, 974, 1052, 1461
BtsI GCAGTG 2 cut(s) 400, 1530
BtsIMutI CAGTG 4 cut(s) 367, 400, 1159, 1530
BveI ACCTGC 2 cut(s) 1248, 1473
Cac8I GCNNGC 4 cut(s) 58, 953, 1267, 1293
CaiI CAGNNNCTG 3 cut(s) 529, 824, 1628
CciI TCATGA 2 cut(s) 559, 600
CfoI GCGC 2 cut(s) 50, 255
Cfr13I GGNCC 2 cut(s) 238, 1161
Cfr9I CCCGGG 2 cut(s) 680, 1593
Csp6I GTAC 2 cut(s) 1631, 1705
CspCI CAANNNNNGTGG 2 cut(s) 230, 265
CviQI GTAC 2 cut(s) 1631, 1705
DdeI CTNAG 8 cut(s) 110, 144, 693, 759, 830, 1032, 1340, 1514
DinI GGCGCC 1 cut(s) 254
DpnI GATC 5 cut(s) 22, 115, 474, 828, 1260
DpnII GATC 5 cut(s) 20, 113, 472, 826, 1258
DrdI GACNNNNNNGTC 1 cut(s) 290
DseDI GACNNNNNNGTC 1 cut(s) 290
Eam1104I CTCTTC 3 cut(s) 1135, 1497, 1647
EarI CTCTTC 3 cut(s) 1135, 1497, 1647
Eco130I CCWWGG 1 cut(s) 512
Eco24I GRGCYC 1 cut(s) 1662
Eco31I GGTCTC 1 cut(s) 573
Eco32I GATATC 1 cut(s) 274
Eco47I GGWCC 1 cut(s) 1161
Eco57I CTGAAG 2 cut(s) 993, 1541
Eco88I CYCGRG 2 cut(s) 680, 1593
EcoNI CCTNNNNNAGG 1 cut(s) 1244
EcoO109I RGGNCCY 1 cut(s) 1161
EcoRII CCWGG 2 cut(s) 313, 1681
EcoRV GATATC 1 cut(s) 274
EcoT14I CCWWGG 1 cut(s) 512
EcoT22I ATGCAT 2 cut(s) 1282, 1371
EcoT38I GRGCYC 1 cut(s) 1662
EgeI GGCGCC 1 cut(s) 254
EheI GGCGCC 1 cut(s) 254
ErhI CCWWGG 1 cut(s) 512
Esp3I CGTCTC 2 cut(s) 891, 1541
FalI AAGNNNNNCTT 2 cut(s) 1293, 1325
FaqI GGGAC 1 cut(s) 1147
FauI CCCGC 2 cut(s) 331, 1236
FauNDI CATATG 1 cut(s) 1371
FbaI TGATCA 1 cut(s) 1258
FblI GTMKAC 1 cut(s) 1232
FokI GGATG 6 cut(s) 442, 482, 867, 961, 1059, 1468
FriOI GRGCYC 1 cut(s) 1662
FspBI CTAG 5 cut(s) 44, 588, 969, 987, 1328
GlaI GCGC 2 cut(s) 49, 254
GsuI CTGGAG 2 cut(s) 915, 1230
HaeII RGCGCY 2 cut(s) 51, 256
HaeIII GGCC 2 cut(s) 239, 1584
HapII CCGG 3 cut(s) 681, 1594, 1610
HhaI GCGC 2 cut(s) 50, 255
Hin1I GRCGYC 1 cut(s) 253
Hin6I GCGC 2 cut(s) 48, 253
HinP1I GCGC 2 cut(s) 48, 253
HincII GTYRAC 2 cut(s) 504, 756
HindII GTYRAC 2 cut(s) 504, 756
HpaII CCGG 3 cut(s) 681, 1594, 1610
HphI GGTGA 2 cut(s) 268, 740
Hpy166II GTNNAC 5 cut(s) 504, 712, 756, 1233, 1601
Hpy188I TCNGA 9 cut(s) 30, 113, 229, 436, 531, 696, 940, 1185, 1701
Hpy8I GTNNAC 5 cut(s) 504, 712, 756, 1233, 1601
HpyAV CCTTC 3 cut(s) 112, 129, 1369
HpyCH4III ACNGT 4 cut(s) 362, 375, 675, 1154
HpyCH4IV ACGT 1 cut(s) 1479
HpyF10VI GCNNNNNNNGC 9 cut(s) 62, 149, 259, 1079, 1187, 1301, 1366, 1541, 1687
HpyF3I CTNAG 8 cut(s) 110, 144, 693, 759, 830, 1032, 1340, 1514
HpySE526I ACGT 1 cut(s) 1479
Hsp92I GRCGYC 1 cut(s) 253
HspAI GCGC 2 cut(s) 48, 253
KasI GGCGCC 1 cut(s) 252
Ksp22I TGATCA 1 cut(s) 1258
Kzo9I GATC 5 cut(s) 20, 113, 472, 826, 1258
LguI GCTCTTC 2 cut(s) 1135, 1497
LmnI GCTCC 4 cut(s) 267, 766, 826, 1195
Lsp1109I GCAGC 9 cut(s) 37, 40, 98, 1087, 1344, 1366, 1391, 1553, 1674
LweI GCATC 2 cut(s) 1066, 1204
MaeI CTAG 5 cut(s) 44, 588, 969, 987, 1328
MaeII ACGT 1 cut(s) 1479
MaeIII GTNAC 2 cut(s) 728, 1637
MalI GATC 5 cut(s) 22, 115, 474, 828, 1260
MbiI CCGCTC 1 cut(s) 692
MboI GATC 5 cut(s) 20, 113, 472, 826, 1258
MboII GAAGA 9 cut(s) 156, 201, 314, 1152, 1455, 1484, 1547, 1661, 1664
MflI RGATCY 2 cut(s) 20, 113
MhlI GDGCHC 1 cut(s) 1662
MluCI AATT 5 cut(s) 223, 645, 659, 934, 1022
Mly113I GGCGCC 1 cut(s) 253
MlyI GAGTC 5 cut(s) 215, 317, 751, 1024, 1162
MmeI TCCRAC 4 cut(s) 744, 884, 1294, 1555
Mph1103I ATGCAT 2 cut(s) 1282, 1371
MroXI GAANNNNTTC 1 cut(s) 1491
MseI TTAA 9 cut(s) 74, 288, 417, 443, 648, 734, 789, 963, 1347
MslI CAYNNNNRTG 4 cut(s) 497, 956, 1370, 1482
MspA1I CMGCKG 2 cut(s) 1013, 1357
MspI CCGG 3 cut(s) 681, 1594, 1610
MspR9I CCNGG 6 cut(s) 315, 681, 682, 1594, 1595, 1683
Mva1269I GAATGC 1 cut(s) 1282
MvaI CCWGG 2 cut(s) 315, 1683
MwoI GCNNNNNNNGC 9 cut(s) 62, 149, 259, 1079, 1187, 1301, 1366, 1541, 1687
NarI GGCGCC 1 cut(s) 253
NciI CCSGG 4 cut(s) 681, 682, 1594, 1595
NdeI CATATG 1 cut(s) 1371
NdeII GATC 5 cut(s) 20, 113, 472, 826, 1258
NlaIV GGNNCC 5 cut(s) 22, 175, 254, 1163, 1421
NmuCI GTSAC 1 cut(s) 728
NsiI ATGCAT 2 cut(s) 1282, 1371
NspI RCATGY 3 cut(s) 502, 955, 1369
NspV TTCGAA 1 cut(s) 199
OliI CACNNNNGTG 1 cut(s) 1482
PaeI GCATGC 1 cut(s) 955
PagI TCATGA 2 cut(s) 559, 600
PciI ACATGT 1 cut(s) 498
PciSI GCTCTTC 2 cut(s) 1135, 1497
PctI GAATGC 1 cut(s) 1282
PdmI GAANNNNTTC 1 cut(s) 1491
PfeI GAWTC 5 cut(s) 526, 597, 802, 1037, 1400
PflFI GACNNNGTC 1 cut(s) 814
PflMI CCANNNNNTGG 3 cut(s) 320, 513, 866
PleI GAGTC 5 cut(s) 214, 316, 751, 1024, 1162
PluTI GGCGCC 1 cut(s) 256
PpsI GAGTC 5 cut(s) 214, 316, 751, 1024, 1162
Ppu21I YACGTR 1 cut(s) 1480
PpuMI RGGWCCY 1 cut(s) 1161
PscI ACATGT 1 cut(s) 498
PshBI ATTAAT 1 cut(s) 417
Psp5II RGGWCCY 1 cut(s) 1161
Psp6I CCWGG 2 cut(s) 313, 1681
PspGI CCWGG 2 cut(s) 313, 1681
PspN4I GGNNCC 5 cut(s) 22, 175, 254, 1163, 1421
PspPI GGNCC 2 cut(s) 238, 1161
PspPPI RGGWCCY 1 cut(s) 1161
PstNI CAGNNNCTG 3 cut(s) 529, 824, 1628
PsuI RGATCY 2 cut(s) 20, 113
PsyI GACNNNGTC 1 cut(s) 814
PvuII CAGCTG 2 cut(s) 1013, 1357
RsaI GTAC 2 cut(s) 1632, 1706
RsaNI GTAC 2 cut(s) 1631, 1705
RseI CAYNNNNRTG 4 cut(s) 497, 956, 1370, 1482
SapI GCTCTTC 2 cut(s) 1135, 1497
SaqAI TTAA 9 cut(s) 74, 288, 417, 443, 648, 734, 789, 963, 1347
Sau3AI GATC 5 cut(s) 20, 113, 472, 826, 1258
Sau96I GGNCC 2 cut(s) 238, 1161
SchI GAGTC 5 cut(s) 215, 317, 751, 1024, 1162
ScrFI CCNGG 6 cut(s) 315, 681, 682, 1594, 1595, 1683
SduI GDGCHC 1 cut(s) 1662
SfaNI GCATC 2 cut(s) 1066, 1204
SfcI CTRYAG 2 cut(s) 387, 1150
SfoI GGCGCC 1 cut(s) 254
SfuI TTCGAA 1 cut(s) 199
SinI GGWCC 1 cut(s) 1161
SmaI CCCGGG 2 cut(s) 682, 1595
SmiMI CAYNNNNRTG 4 cut(s) 497, 956, 1370, 1482
SmlI CTYRAG 3 cut(s) 1090, 1395, 1502
SmoI CTYRAG 3 cut(s) 1090, 1395, 1502
SphI GCATGC 1 cut(s) 955
Sse9I AATT 5 cut(s) 223, 645, 659, 934, 1022
SsiI CCGC 5 cut(s) 149, 338, 690, 1080, 1243
SspDI GGCGCC 1 cut(s) 252
SspI AATATT 1 cut(s) 248
SspMI CTAG 5 cut(s) 44, 588, 969, 987, 1328
StyD4I CCNGG 6 cut(s) 313, 679, 680, 1592, 1593, 1681
StyI CCWWGG 1 cut(s) 512
TaaI ACNGT 4 cut(s) 362, 375, 675, 1154
TaiI ACGT 1 cut(s) 1482
TaqI TCGA 5 cut(s) 199, 218, 836, 931, 1693
TasI AATT 5 cut(s) 223, 645, 659, 934, 1022
TatI WGTACW 2 cut(s) 1630, 1704
TauI GCSGC 2 cut(s) 152, 1082
TfiI GAWTC 5 cut(s) 526, 597, 802, 1037, 1400
Tru1I TTAA 9 cut(s) 74, 288, 417, 443, 648, 734, 789, 963, 1347
Tru9I TTAA 9 cut(s) 74, 288, 417, 443, 648, 734, 789, 963, 1347
TscAI CASTG 4 cut(s) 367, 400, 1159, 1537
TseFI GTSAC 1 cut(s) 728
TseI GCWGC 9 cut(s) 50, 53, 86, 1100, 1354, 1357, 1379, 1541, 1687
Tsp45I GTSAC 1 cut(s) 728
TspDTI ATGAA 9 cut(s) 111, 156, 481, 589, 617, 807, 815, 1388, 1484
TspGWI ACGGA 3 cut(s) 915, 972, 1288
TspMI CCCGGG 2 cut(s) 680, 1593
TspRI CASTG 4 cut(s) 367, 400, 1159, 1537
Tth111I GACNNNGTC 1 cut(s) 814
Van91I CCANNNNNTGG 3 cut(s) 320, 513, 866
VpaK11BI GGWCC 1 cut(s) 1161
VspI ATTAAT 1 cut(s) 417
XagI CCTNNNNNAGG 1 cut(s) 1244
XapI RAATTY 2 cut(s) 659, 934
XbaI TCTAGA 2 cut(s) 587, 986
XceI RCATGY 3 cut(s) 502, 955, 1369
XmaI CCCGGG 2 cut(s) 680, 1593
XmiI GTMKAC 1 cut(s) 1232
XmnI GAANNNNTTC 1 cut(s) 1491
XspI CTAG 5 cut(s) 44, 588, 969, 987, 1328
Zsp2I ATGCAT 2 cut(s) 1282, 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.