pycom15g04690

Polyadenylate-binding protein-interacting protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005353
Physical Location & Seq
Reverse (-)
2780218 .. 2783195
2978 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g04690.1

Sequence Viewer

Length: 1719 bp
ATGAGCTTGTCCAAGAAAGGATCCTTTACCAACGACACCAAACTAAGCACTGCAAACAAGGCAACTGCATTGAATCCCAATGCGGCAGAGTTTGTTCCCTTTTCCCTCAGATCTCCGTCATCTGGAAGCACCAGCGCAGCTCAGGCCACAACAAAGTTTTCTTCTTCAGGAACATTTGGAAAAGCAGTACTAGATCGAACAGAATCTTCCACATCAAATAATTCCGATGACGAGGCCCACCAATATTGGCGCCACCAGCTCCCTGATGATATTACCCCTGACTTTAAGGTCATGGGAGAAGATGAGTCGCAAGTCCTTGGGAACCTCTCTTTAGCGGGTTTGTCCTTACACGAAGATGTTGAAGCAACACGGTTTCCTGCCTCTATGGGCAGTGGATACTTATCAAACGAGTCACATATTAATGGCAATAGCTTTTCTGAAAAGTTGAGAGCTTCTGCACCTCCCTTTGGGGGGGAGGATCTTTCATCGGCCAGTTTCCTTCATATGTCACCTAAGCCTTGGGATAAGCAGATTCTGAACAGCAATCAGTTTGTCAGCAATGGTCAGGAGGAGTATCCGTATGATGGCATGTCTAGACACGGGTTCATGAATGATATGTTGGGTGAGCATGCAATTGTGGAAGGTGCGGATATTAACCCTGCTGAGTTTTTGGCTTCACAGTTCCCCGGCTTTTCTGCTCAGAGCCTTGCTGAAGTTTACTTTGCCAATGGTTGTGACTTGAACCTGACTGTTGAGATGTTAACTCAGTTGGAGCTTCAAGTTGATGGTGGTTTTAATGAGAATCTGAACTCAAAGACCTTGTCAGTTCCCGATCTTAGCTCAATGGACTTCCCTGCACTTACACCAACAGACAGTCATCATGGTCATTCAAAATATGCCGGAGATGATGATTTCCAAAGTGGCAATCCTTATCGATCTTCTGATAAGGACAACATGCTTTTGTTCAAGTCTAGCTCATCAATTCCTACTAGAGGTGCGATAGATCTTGCTTCAGCTGTCAGGAAATTGGCGACCCAGGATTCTGGATGGAAGTATGAGAGAAATGGTTCTGCCGATGCTGCTATTGGCTCAAGCAGACGTTCCCAGCTTTTGAATAGCACTTACAGCACTGGGCATGGAAGAGGCATGTACAGTGACAGGTCACAGAATCGTGGTTCACCTCGGACTGCGCCTGTTTGGCTTGAAACTGGAGATGCAGTTGCAAATATGTATTCTGATCTGCGGGATGAAGCTCGGGACCATGCACTCCTACGTAATGCATACTTTGAGCAGGCACGGCAAGCATACCTTGTTGGAAACAAGGCTCTAGCAAAGGAGCTGAGCGTTAAAGGACAGCTGCACAACATGCATATGAAGGAAGCTCATGAAAAAGCTCAAGAGTCTATATATCGTCAGAGGAACCCAGTTTCTCCAGAGATGCAGGGCAATGGGAGGTCACAAGAGAGGATGATAGACCTGCACGGGCTGCATGTAAGTGAAGCCCTTCATGTCCTGGAGCACGAGCTGAGCGTGTTGAGGAACGCTGCCAGAGCAGGAGAGCCTGGTATTCTGGTTTGCATATGTGTGGGAACTGGCCACCACACCAGGGGCTCTGGCACACCGGCAAGGCTCCCAATAGCTGTACAGCGATACCTACTCAAAGAAGGCATTGACTACACTGAACCACAGCCAGGGCTGCTCCGAATTCTGTTATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF1771 PAM2 PPR PPR_2 Smr

Protein Analysis

573

Amino Acids

62.43

Weight (kDa)

5.66

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1771 PF08590 411 - 474 4.2e-19 Domain of unknown function (DUF1771)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 287
Acc36I ACCTGC 1 cut(s) 1485
AccB1I GGYRCC 1 cut(s) 249
AciI CCGC 4 cut(s) 83, 335, 647, 1243
AclWI GGATC 3 cut(s) 15, 28, 486
AcoI YGGCCR 2 cut(s) 489, 1594
AcsI RAATTY 1 cut(s) 1704
AcuI CTGAAG 3 cut(s) 150, 732, 996
AcyI GRCGYC 1 cut(s) 250
AfaI GTAC 3 cut(s) 189, 1151, 1644
AfiI CCNNNNNNNGG 8 cut(s) 122, 467, 470, 471, 584, 992, 1606, 1691
AgsI TTSAA 8 cut(s) 73, 362, 742, 779, 891, 967, 1114, 1205
AjnI CCWGG 5 cut(s) 1035, 1512, 1561, 1604, 1690
AjuI GAANNNNNNNTTGG 2 cut(s) 602, 634
Alw21I GWGCWC 1 cut(s) 1521
AlwI GGATC 3 cut(s) 15, 28, 486
AlwNI CAGNNNCTG 1 cut(s) 535
Ama87I CYCGRG 1 cut(s) 1254
AoxI GGCC 4 cut(s) 144, 234, 489, 1594
ApeKI GCWGC 6 cut(s) 137, 1079, 1357, 1486, 1544, 1696
ApoI RAATTY 1 cut(s) 1704
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
AseI ATTAAT 1 cut(s) 420
Asp700I GAANNNNTTC 2 cut(s) 1066, 1503
AspLEI GCGC 3 cut(s) 137, 252, 1192
AspS9I GGNCC 2 cut(s) 235, 1258
AsuC2I CCSGG 1 cut(s) 687
AsuHPI GGTGA 3 cut(s) 501, 635, 1170
AvaI CYCGRG 1 cut(s) 1254
AvaII GGWCC 1 cut(s) 1258
BalI TGGCCA 1 cut(s) 1596
BamHI GGATCC 1 cut(s) 20
BanI GGYRCC 1 cut(s) 249
BanII GRGCYC 1 cut(s) 1613
BauI CACGAG 1 cut(s) 1520
Bbv12I GWGCWC 1 cut(s) 1521
BbvI GCAGC 6 cut(s) 149, 1066, 1344, 1473, 1531, 1683
BccI CCATC 3 cut(s) 578, 779, 1041
BceAI ACGGC 1 cut(s) 1313
BciT130I CCWGG 5 cut(s) 1037, 1514, 1563, 1606, 1692
BciVI GTATCC 2 cut(s) 389, 585
BcnI CCSGG 1 cut(s) 687
BfaI CTAG 5 cut(s) 191, 594, 972, 990, 1328
BfoI RGCGCY 1 cut(s) 253
BfuAI ACCTGC 1 cut(s) 1485
BfuI GTATCC 2 cut(s) 389, 585
BglI GCCNNNNNGGC 1 cut(s) 1198
BglII AGATCT 2 cut(s) 110, 1003
BisI GCNGC 7 cut(s) 84, 138, 1080, 1358, 1487, 1545, 1697
BlpI GCTNAGC 2 cut(s) 1340, 1526
BlsI GCNGC 7 cut(s) 85, 139, 1081, 1359, 1488, 1546, 1698
BmcAI AGTACT 1 cut(s) 189
Bme1390I CCNGG 6 cut(s) 687, 1037, 1514, 1563, 1606, 1692
Bme18I GGWCC 1 cut(s) 1258
BmeT110I CYCGRG 1 cut(s) 1254
BmgT120I GGNCC 2 cut(s) 235, 1258
BmiI GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
BmrFI CCNGG 6 cut(s) 687, 1037, 1514, 1563, 1606, 1692
BmrI ACTGGG 2 cut(s) 1140, 1418
BmsI GCATC 3 cut(s) 1066, 1204, 1428
BmuI ACTGGG 2 cut(s) 1140, 1418
BpmI CTGGAG 3 cut(s) 1230, 1416, 1535
Bpu10I CCTNAGC 2 cut(s) 141, 513
Bpu1102I GCTNAGC 2 cut(s) 1340, 1526
BpuEI CTTGAG 2 cut(s) 1075, 1380
BpuMI CCSGG 1 cut(s) 687
Bsa29I ATCGAT 1 cut(s) 934
BsaAI YACGTR 1 cut(s) 1274
BsaBI GATNNNNATC 1 cut(s) 400
BsaHI GRCGYC 1 cut(s) 250
BsaJI CCNNGG 7 cut(s) 316, 518, 685, 1035, 1181, 1605, 1691
BsaXI ACNNNNNCTCC 4 cut(s) 563, 593, 1203, 1233
Bsc4I CCNNNNNNNGG 8 cut(s) 122, 467, 470, 471, 584, 992, 1606, 1691
Bse118I RCCGGY 1 cut(s) 1621
Bse1I ACTGG 5 cut(s) 492, 1135, 1213, 1424, 1597
Bse3DI GCAATG 2 cut(s) 565, 1453
Bse8I GATNNNNATC 1 cut(s) 400
BseBI CCWGG 5 cut(s) 1037, 1514, 1563, 1606, 1692
BseCI ATCGAT 1 cut(s) 934
BseDI CCNNGG 7 cut(s) 316, 518, 685, 1035, 1181, 1605, 1691
BseGI GGATG 3 cut(s) 1052, 1252, 1473
BseJI GATNNNNATC 1 cut(s) 400
BseLI CCNNNNNNNGG 8 cut(s) 122, 467, 470, 471, 584, 992, 1606, 1691
BseMI GCAATG 2 cut(s) 565, 1453
BseMII CTCAG 7 cut(s) 121, 155, 654, 713, 779, 1331, 1517
BseNI ACTGG 5 cut(s) 492, 1135, 1213, 1424, 1597
BseRI GAGGAG 1 cut(s) 584
BseXI GCAGC 6 cut(s) 149, 1066, 1344, 1473, 1531, 1683
BseYI CCCAGC 1 cut(s) 1104
BsgI GTGCAG 4 cut(s) 441, 840, 1343, 1463
BshFI GGCC 4 cut(s) 146, 236, 491, 1596
BshNI GGYRCC 1 cut(s) 249
BshVI ATCGAT 1 cut(s) 934
BsiHKAI GWGCWC 1 cut(s) 1521
BsiHKCI CYCGRG 1 cut(s) 1254
BsiSI CCGG 3 cut(s) 687, 900, 1622
BslFI GGGAC 1 cut(s) 1271
BslI CCNNNNNNNGG 8 cut(s) 122, 467, 470, 471, 584, 992, 1606, 1691
BsmFI GGGAC 1 cut(s) 1271
BsnI GGCC 4 cut(s) 146, 236, 491, 1596
BsoBI CYCGRG 1 cut(s) 1254
Bsp1286I GDGCHC 2 cut(s) 1521, 1613
Bsp1407I TGTACA 2 cut(s) 1149, 1642
Bsp143I GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
Bsp1720I GCTNAGC 2 cut(s) 1340, 1526
BspACI CCGC 4 cut(s) 83, 335, 647, 1243
BspANI GGCC 4 cut(s) 146, 236, 491, 1596
BspCNI CTCAG 7 cut(s) 120, 154, 655, 712, 778, 1332, 1518
BspDI ATCGAT 1 cut(s) 934
BspHI TCATGA 2 cut(s) 606, 1384
BspLI GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
BspMI ACCTGC 1 cut(s) 1485
BspPI GGATC 3 cut(s) 15, 28, 486
BspT107I GGYRCC 1 cut(s) 249
BsrDI GCAATG 2 cut(s) 565, 1453
BsrFI RCCGGY 1 cut(s) 1621
BsrGI TGTACA 2 cut(s) 1149, 1642
BsrI ACTGG 5 cut(s) 492, 1135, 1213, 1424, 1597
BssAI RCCGGY 1 cut(s) 1621
BssECI CCNNGG 7 cut(s) 316, 518, 685, 1035, 1181, 1605, 1691
BssMI GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
BssNI GRCGYC 1 cut(s) 250
BssSI CACGAG 1 cut(s) 1520
BssT1I CCWWGG 2 cut(s) 316, 518
Bst2BI CACGAG 1 cut(s) 1520
Bst2UI CCWGG 5 cut(s) 1037, 1514, 1563, 1606, 1692
Bst4CI ACNGT 5 cut(s) 372, 681, 751, 875, 1154
Bst6I CTCTTC 1 cut(s) 1135
BstACI GRCGYC 1 cut(s) 250
BstAPI GCANNNNNTGC 2 cut(s) 1366, 1486
BstAUI TGTACA 2 cut(s) 1149, 1642
BstBAI YACGTR 1 cut(s) 1274
BstC8I GCNNGC 3 cut(s) 630, 1293, 1302
BstENI CCTNNNNNAGG 1 cut(s) 990
BstF5I GGATG 3 cut(s) 1052, 1252, 1473
BstH2I RGCGCY 1 cut(s) 253
BstHHI GCGC 3 cut(s) 137, 252, 1192
BstKTI GATC 8 cut(s) 23, 113, 196, 481, 835, 938, 1006, 1240
BstMBI GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
BstNI CCWGG 5 cut(s) 1037, 1514, 1563, 1606, 1692
BstNSI RCATGY 6 cut(s) 592, 632, 958, 1150, 1369, 1493
BstSCI CCNGG 6 cut(s) 685, 1035, 1512, 1561, 1604, 1690
BstSNI TACGTA 1 cut(s) 1274
BstV1I GCAGC 6 cut(s) 149, 1066, 1344, 1473, 1531, 1683
BstX2I RGATCY 4 cut(s) 20, 110, 478, 1003
BstXI CCANNNNNNTGG 1 cut(s) 1043
BstYI RGATCY 4 cut(s) 20, 110, 478, 1003
Bsu15I ATCGAT 1 cut(s) 934
BsuI GTATCC 2 cut(s) 389, 585
BsuRI GGCC 4 cut(s) 146, 236, 491, 1596
BsuTUI ATCGAT 1 cut(s) 934
BtsCI GGATG 3 cut(s) 1052, 1252, 1473
BtsI GCAGTG 2 cut(s) 48, 397
BtsIMutI CAGTG 5 cut(s) 48, 397, 1128, 1159, 1677
BveI ACCTGC 1 cut(s) 1485
Cac8I GCNNGC 3 cut(s) 630, 1293, 1302
CaiI CAGNNNCTG 1 cut(s) 535
CciI TCATGA 2 cut(s) 606, 1384
CfoI GCGC 3 cut(s) 137, 252, 1192
Cfr10I RCCGGY 1 cut(s) 1621
Cfr13I GGNCC 2 cut(s) 235, 1258
ClaI ATCGAT 1 cut(s) 934
Csp6I GTAC 3 cut(s) 188, 1150, 1643
CspCI CAANNNNNGTGG 2 cut(s) 227, 262
CviQI GTAC 3 cut(s) 188, 1150, 1643
DinI GGCGCC 1 cut(s) 251
DpnI GATC 8 cut(s) 22, 112, 195, 480, 834, 937, 1005, 1239
DpnII GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
DrdI GACNNNNNNGTC 1 cut(s) 287
DseDI GACNNNNNNGTC 1 cut(s) 287
EaeI YGGCCR 2 cut(s) 489, 1594
Eam1104I CTCTTC 1 cut(s) 1135
EarI CTCTTC 1 cut(s) 1135
Eco105I TACGTA 1 cut(s) 1274
Eco130I CCWWGG 2 cut(s) 316, 518
Eco24I GRGCYC 1 cut(s) 1613
Eco47I GGWCC 1 cut(s) 1258
Eco57I CTGAAG 3 cut(s) 150, 732, 996
Eco88I CYCGRG 1 cut(s) 1254
EcoNI CCTNNNNNAGG 1 cut(s) 990
EcoRI GAATTC 1 cut(s) 1704
EcoRII CCWGG 5 cut(s) 1035, 1512, 1561, 1604, 1690
EcoT14I CCWWGG 2 cut(s) 316, 518
EcoT22I ATGCAT 2 cut(s) 1282, 1371
EcoT38I GRGCYC 1 cut(s) 1613
EgeI GGCGCC 1 cut(s) 251
EheI GGCGCC 1 cut(s) 251
ErhI CCWWGG 2 cut(s) 316, 518
FalI AAGNNNNNCTT 2 cut(s) 1293, 1325
FaqI GGGAC 1 cut(s) 1271
FauI CCCGC 2 cut(s) 328, 1236
FauNDI CATATG 3 cut(s) 504, 1371, 1580
Fnu4HI GCNGC 7 cut(s) 84, 138, 1080, 1358, 1487, 1545, 1697
FokI GGATG 3 cut(s) 1059, 1259, 1480
FriOI GRGCYC 1 cut(s) 1613
Fsp4HI GCNGC 7 cut(s) 84, 138, 1080, 1358, 1487, 1545, 1697
FspBI CTAG 5 cut(s) 191, 594, 972, 990, 1328
GlaI GCGC 3 cut(s) 136, 251, 1191
GluI GCNGC 7 cut(s) 84, 138, 1080, 1358, 1487, 1545, 1697
GsaI CCCAGC 1 cut(s) 1108
GsuI CTGGAG 3 cut(s) 1230, 1416, 1535
HaeII RGCGCY 1 cut(s) 253
HaeIII GGCC 4 cut(s) 146, 236, 491, 1596
HapII CCGG 3 cut(s) 687, 900, 1622
HhaI GCGC 3 cut(s) 137, 252, 1192
Hin1I GRCGYC 1 cut(s) 250
Hin6I GCGC 3 cut(s) 135, 250, 1190
HinP1I GCGC 3 cut(s) 135, 250, 1190
HincII GTYRAC 1 cut(s) 762
HindII GTYRAC 1 cut(s) 762
HinfI GANTC 9 cut(s) 73, 203, 305, 410, 532, 802, 1040, 1168, 1400
HpaI GTTAAC 1 cut(s) 762
HpaII CCGG 3 cut(s) 687, 900, 1622
HphI GGTGA 3 cut(s) 501, 635, 1170
Hpy166II GTNNAC 3 cut(s) 718, 762, 1178
Hpy8I GTNNAC 3 cut(s) 718, 762, 1178
HpyAV CCTTC 5 cut(s) 509, 635, 1369, 1514, 1658
HpyCH4III ACNGT 5 cut(s) 372, 681, 751, 875, 1154
HpyCH4IV ACGT 2 cut(s) 1099, 1273
HpySE526I ACGT 2 cut(s) 1099, 1273
Hsp92I GRCGYC 1 cut(s) 250
HspAI GCGC 3 cut(s) 135, 250, 1190
KasI GGCGCC 1 cut(s) 249
KspAI GTTAAC 1 cut(s) 762
Kzo9I GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
LmnI GCTCC 6 cut(s) 264, 772, 1336, 1516, 1635, 1704
Lsp1109I GCAGC 6 cut(s) 149, 1066, 1344, 1473, 1531, 1683
LweI GCATC 3 cut(s) 1066, 1204, 1428
MaeI CTAG 5 cut(s) 191, 594, 972, 990, 1328
MaeII ACGT 2 cut(s) 1099, 1273
MaeIII GTNAC 6 cut(s) 411, 507, 734, 1154, 1161, 1455
MalI GATC 8 cut(s) 22, 112, 195, 480, 834, 937, 1005, 1239
MboI GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
MboII GAAGA 7 cut(s) 153, 156, 198, 311, 365, 930, 1152
MfeI CAATTG 1 cut(s) 633
MflI RGATCY 4 cut(s) 20, 110, 478, 1003
MhlI GDGCHC 2 cut(s) 1521, 1613
MlsI TGGCCA 1 cut(s) 1596
MluCI AATT 5 cut(s) 220, 633, 981, 1025, 1704
MluNI TGGCCA 1 cut(s) 1596
Mly113I GGCGCC 1 cut(s) 250
MlyI GAGTC 3 cut(s) 314, 419, 1409
MmeI TCCRAC 2 cut(s) 750, 1294
Mox20I TGGCCA 1 cut(s) 1596
Mph1103I ATGCAT 2 cut(s) 1282, 1371
MroXI GAANNNNTTC 2 cut(s) 1066, 1503
MscI TGGCCA 1 cut(s) 1596
MseI TTAA 6 cut(s) 285, 420, 654, 761, 795, 1347
MslI CAYNNNNRTG 5 cut(s) 354, 420, 1370, 1494, 1583
Msp20I TGGCCA 1 cut(s) 1596
MspA1I CMGCKG 2 cut(s) 1016, 1357
MspI CCGG 3 cut(s) 687, 900, 1622
MspR9I CCNGG 6 cut(s) 687, 1037, 1514, 1563, 1606, 1692
MunI CAATTG 1 cut(s) 633
MvaI CCWGG 5 cut(s) 1037, 1514, 1563, 1606, 1692
NarI GGCGCC 1 cut(s) 250
NciI CCSGG 1 cut(s) 687
NdeI CATATG 3 cut(s) 504, 1371, 1580
NdeII GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
NlaIV GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
NmuCI GTSAC 6 cut(s) 411, 507, 734, 1154, 1161, 1455
NsiI ATGCAT 2 cut(s) 1282, 1371
NspI RCATGY 6 cut(s) 592, 632, 958, 1150, 1369, 1493
PaeI GCATGC 1 cut(s) 632
PagI TCATGA 2 cut(s) 606, 1384
PcsI WCGNNNNNNNCGW 1 cut(s) 1527
PdmI GAANNNNTTC 2 cut(s) 1066, 1503
PfeI GAWTC 6 cut(s) 73, 203, 532, 802, 1040, 1168
PflFI GACNNNGTC 1 cut(s) 820
PfoI TCCNGGA 1 cut(s) 1512
PkrI GCNGC 7 cut(s) 85, 139, 1081, 1359, 1488, 1546, 1698
PleI GAGTC 3 cut(s) 313, 418, 1408
PluTI GGCGCC 1 cut(s) 253
PpsI GAGTC 3 cut(s) 313, 418, 1408
Ppu21I YACGTR 1 cut(s) 1274
PshBI ATTAAT 1 cut(s) 420
Psp6I CCWGG 5 cut(s) 1035, 1512, 1561, 1604, 1690
PspFI CCCAGC 1 cut(s) 1104
PspGI CCWGG 5 cut(s) 1035, 1512, 1561, 1604, 1690
PspN4I GGNNCC 6 cut(s) 22, 251, 323, 1259, 1421, 1631
PspPI GGNCC 2 cut(s) 235, 1258
PstNI CAGNNNCTG 1 cut(s) 535
PsuI RGATCY 4 cut(s) 20, 110, 478, 1003
PsyI GACNNNGTC 1 cut(s) 820
PvuII CAGCTG 2 cut(s) 1016, 1357
RsaI GTAC 3 cut(s) 189, 1151, 1644
RsaNI GTAC 3 cut(s) 188, 1150, 1643
RseI CAYNNNNRTG 5 cut(s) 354, 420, 1370, 1494, 1583
SaqAI TTAA 6 cut(s) 285, 420, 654, 761, 795, 1347
SatI GCNGC 7 cut(s) 84, 138, 1080, 1358, 1487, 1545, 1697
Sau3AI GATC 8 cut(s) 20, 110, 193, 478, 832, 935, 1003, 1237
Sau96I GGNCC 2 cut(s) 235, 1258
ScaI AGTACT 1 cut(s) 189
SchI GAGTC 3 cut(s) 314, 419, 1409
ScrFI CCNGG 6 cut(s) 687, 1037, 1514, 1563, 1606, 1692
SduI GDGCHC 2 cut(s) 1521, 1613
SfaNI GCATC 3 cut(s) 1066, 1204, 1428
SfoI GGCGCC 1 cut(s) 251
SinI GGWCC 1 cut(s) 1258
SmiMI CAYNNNNRTG 5 cut(s) 354, 420, 1370, 1494, 1583
SmlI CTYRAG 2 cut(s) 1090, 1395
SmoI CTYRAG 2 cut(s) 1090, 1395
SnaBI TACGTA 1 cut(s) 1274
SphI GCATGC 1 cut(s) 632
Sse9I AATT 5 cut(s) 220, 633, 981, 1025, 1704
SsiI CCGC 4 cut(s) 83, 335, 647, 1243
SspDI GGCGCC 1 cut(s) 249
SspI AATATT 1 cut(s) 245
SspMI CTAG 5 cut(s) 191, 594, 972, 990, 1328
StyD4I CCNGG 6 cut(s) 685, 1035, 1512, 1561, 1604, 1690
StyI CCWWGG 2 cut(s) 316, 518
TaaI ACNGT 5 cut(s) 372, 681, 751, 875, 1154
TaiI ACGT 2 cut(s) 1102, 1276
TaqI TCGA 2 cut(s) 196, 934
TasI AATT 5 cut(s) 220, 633, 981, 1025, 1704
TatI WGTACW 3 cut(s) 187, 1149, 1642
TauI GCSGC 1 cut(s) 86
TfiI GAWTC 6 cut(s) 73, 203, 532, 802, 1040, 1168
Tru1I TTAA 6 cut(s) 285, 420, 654, 761, 795, 1347
Tru9I TTAA 6 cut(s) 285, 420, 654, 761, 795, 1347
TscAI CASTG 5 cut(s) 55, 397, 1135, 1159, 1684
TseFI GTSAC 6 cut(s) 411, 507, 734, 1154, 1161, 1455
TseI GCWGC 6 cut(s) 137, 1079, 1357, 1486, 1544, 1696
Tsp45I GTSAC 6 cut(s) 411, 507, 734, 1154, 1161, 1455
TspDTI ATGAA 8 cut(s) 474, 491, 595, 623, 1263, 1388, 1401, 1496
TspGWI ACGGA 2 cut(s) 105, 567
TspRI CASTG 5 cut(s) 55, 397, 1135, 1159, 1684
Tth111I GACNNNGTC 1 cut(s) 820
VpaK11BI GGWCC 1 cut(s) 1258
VspI ATTAAT 1 cut(s) 420
XagI CCTNNNNNAGG 1 cut(s) 990
XapI RAATTY 1 cut(s) 1704
XbaI TCTAGA 1 cut(s) 593
XceI RCATGY 6 cut(s) 592, 632, 958, 1150, 1369, 1493
XmnI GAANNNNTTC 2 cut(s) 1066, 1503
XspI CTAG 5 cut(s) 191, 594, 972, 990, 1328
ZrmI AGTACT 1 cut(s) 189
Zsp2I ATGCAT 2 cut(s) 1282, 1371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.