Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0008606

Physical Location & Seq

Genomic Coordinates Forward (+)

5661316 .. 5668347

Gene Structure 7032 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1071300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGAAGATTTGGTGCTGCCTATGCTTCACCCAAGGAGACGAACCAGAAGAGGACGATAGCGAGGCGGAGGCGATCATGAAGGAGGGGGATTTTGGAAATGACGGCAATTCGGAGGGCGCCATCGGAAATGGCGACGAAATTGACGGCAATGCTCAGAGTTTGGGGCTGGTGGGGAATGAGCGCGGCCGTAATGACCATCTGGTATTGTTCGAAGGGATGGTTGAGGCAATGCGTGGTGGTGGCGCTCAGTGGGATGAGTCTGTTTGTGTTGGTGCTCTTGCGTCGTTGAGGGCCTCGATTGGGAACCCTTGGATTTCCGAGGGCGAGAGTAGCTCGGCTGCAGATAATGGCAGTGATCACGATTCGCACCATAAGCGAGCCAAAGTTCAATCCTTTAATCATAATTTCCACCATGCAATGGCTATGGCTTCAGGTGCTGGAAATTCCAGTTCATCTGCAGAAAGAGACTACAGAATAAATGAGAGCTCTTTCATTCCATATAAGAGCGAGACATTTTTTCAAAATACTACTCCTAATATTGGCTGTGAGGAGGGCCCCTTTGATTCTGGCAGTGGTAAGGATGATGACGGTGATCATAGTGGCACCTCAAAAACAGAAGATTTAGAAGTTCGGATGGATCTTACAGATGACCTATTACATATGGTTTTCTCTTTCTTGGACCACATTAATCTTTGCCGAGCTGCAATAGTCTGTAGGCAGTGGCGATCTGCTAGTGCTCATGAAGATTTCTGGAGGTGTCTGAATTTTGAGAATCGAAGTATATCTGTGGAGCAATTTGAGGACATATGTTGGCGGTATCCCAATGCCACAGAATTGAATATTTCTGGTACCCCTGCTATTCACTCGCTTGTTATGAAAGCTCTCTCTTCATTGAGGAATCTCGAGGTTTTAACCCTAGGGAAAGGGCAACTAGGGGACATCTTTTTCCATTCCTTGGCAGACTTTCAAATGTTGAAAAGTTTGATCATCAATGATGCTACTCTTGGTAATGGTATCCAGGAGATACCTATAAACCATGATAGACTGCGTCAGCTTCAATTAACAAAATGTCGTGTTATGCGGATATCCATCAGGTGTCCTCAACTTGAAACTCTGTCATTGAAACGCAGTAACATGGCGCAGGCTGTTCTTAATAGCCCTCTTTTGCATGATCTTGATATAGGCTCTTGCCACAAGCTTTCAGATGCTGCAATTCGTTCAGCGGCAATCTCATGTCCTCAATTAGAGTCATTGGATATGTCAAATTGTTCATGTGTTACTGATGAAACTCTACGTGAGATTGCTCTTGCTTGTGCTAATCTCCATGTTCTCAATGCGTCGTACTGTCCAAATATATCTCTTGAGTCTGTAAGACTGCCAATGTTGACAGTTCTTAAGCTTCACAGTTGTGAGGGCATCACCTCGGCTTCAATGGTTGCAATATCTCATAGTTACATGCTTGAGGTTTTGGAGCTTGACAATTGCAGTCTACTTACCGCTGTGAACTTGGACCTTCCACACTTGCAGAATATTAGACTAGTACATTGTCGCAAATTTGCTGATTTGAATCTACGATGCATCATGCTGTCATCAATAATGGTCTCTAACTGTCCTGTGCTCCATCGTATCAACATCACTTCAAATTCACTTCAGAAACTAGCATTGCAAAAGCAAGAGAGCTTAACCACGCTGGCACTGCAATGCCAAAGTTTGCAAGAAGTGGACCTTACAGATTGTGAATCTTTAACAAATTCTATATGTGATGTTTTCAGCGATGGTGGTGGGTGTCCTTTGCTCAAAACGTTAGTTCTTGAAAACTGTGAGAGCTTAACCACGGTTCGATTCTGTAGCACTTCTTTAGTCAGCCTCTCACTTGTTGGTTGCCGGGCAATTACATCTCTCGAACTGACTTGCCCCTATCTTGAACAAGTTTCTTTAGATGGTTGTGATCATCTTGAAAGAGCAGCATTTTGTCCAGTTGGTCTTAGGTCACTAAATTTGGGAATATGTCCCAAATTGAATGTGCTCAGTATCGAAGCGCCAAATATGGTGCTGCTGGAGTTGAAGGGATGTGGTGTGTTAGCTGAAGCATCCATCAATTGTCCACTATTAACATCTCTAGACGCTTCCTTTTGCAGTCAGCTTAGGGACGATTGCTTGTCTGCAACAGCTGCTTCATGCCCAATGATAGAGTCTTTAATTCTAATGTCATGCCCCTCTGTTGGTTCTGATGGACTCTACTCATTGCGCTGGCTTCCAAATTTGATTCTGCTTGATTTGTCCTACACTTTCTTGACAAACTTGAAGCCAGTTTTCGAGTCTTGTATGAAACTTAAGGTGTTGAAGTTACAAGCCTGCAAGTACTTATCTGACTCATCATTGGAGCCTCTTTACAAGGATGGGGCTCTTCCAGCTCTCCAAGAACTGGATTTGTCTTATGGAACCCTCTGTCAGTCTGCTATCGAGGAGCTTCTTTCTTTTTGTATGCACTTGACTCATGTGAGCTTGAATGGCTGTGTGAACATGCATGACCTGAATTGGGGTAGCAGTGCCGGGCAACCTTCCCTATCTGGCATGTTTTTACCTGAGAATGTCCAGGTGCCAATTGAGCAGCCAATCCGGTTACTGCAGAACCTCAACTGTGTAGGTTGTCCAAATATTAGGAAAGTTGTCATTCCACCAGCAGCACGTTGTTTCCACATGTCATCTTTAAACCTTTCTCTTTCTGCAAATTTAAAGGACGTTGATGTTGCTTGTTTCAACCTCTGCTTTCTTAATTTGAGCAATTGTACTTCTTTGGAAGTTTTGAAGCTTGACTGTCCGAAATTGACTATTCTCTTTCTTCAGTCTTGCAACATCGATGAAACAGTGGTGGAAGCTGCCATATCGAAATGTAGCATGCTGGAGACTCTTGATGTTCGTTTTTGTCCCAAGATAAGCCCGACGAGCATGGGGAGATTACGTGCTGCATGCCCTAATTTGAAGCGCATATTCAGCAGCCTGCAACAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009653 GO:0010252 GO:0032502 GO:0042592 GO:0048646 GO:0048856 GO:0048878 GO:0065007 GO:0065008 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

1005

Amino Acids

109.81

Weight (kDa)

5.03

Isoelectric Point (pI)

49.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
F-box	PF00646	213 - 252	1.2e-09	F-box domain
F-box-like	PF12937	216 - 256	8.4e-10	F-box-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33210
fragaria_vesca	FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970
malus_domestica	MD08G1071300.v1.1 MD15G1049900.v1.1
prunus_persica	Prupe.1G404200_v2.0.a1
pyrus_communis	pycom08g05910 pycom08g05920 pycom15g04850
rosa_chinensis	RchiOBHm_Chr6g0311801
rosa_laevigata	RLG00000010373
rosa_multiflora	Rmu_sc0002888.1_g000043
rosa_roxburghii	Rroxscaffold_7G00157300
rosa_samantha	Rh6AG507100 Rh6BG518100 Rh6CG523600 Rh6DG509400
rosa_wichuraiana	Rw6G044120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	848
AccB1I	GGYRCC	4 cut(s)	116, 602, 848, 2599
AccB7I	CCANNNNNTGG	3 cut(s)	418, 955, 2425
AccI	GTMKAC	1 cut(s)	1489
AccII	CGCG	1 cut(s)	183
AciI	CCGC	6 cut(s)	65, 183, 814, 1081, 1223, 1497
AclI	AACGTT	1 cut(s)	1802
AclWI	GGATC	1 cut(s)	645
AcoI	YGGCCR	1 cut(s)	184
AcsI	RAATTY	8 cut(s)	442, 763, 1553, 1642, 1750, 1996, 2260, 2731
AcuI	CTGAAG	4 cut(s)	414, 1634, 2106, 2828
AcyI	GRCGYC	1 cut(s)	117
AfaI	GTAC	5 cut(s)	850, 1343, 1542, 2363, 2791
AfiI	CCNNNNNNNGG	7 cut(s)	300, 418, 539, 955, 2222, 2425, 2539
AflII	CTTAAG	2 cut(s)	1394, 2333
AflIII	ACRYGT	1 cut(s)	2700
AhlI	ACTAGT	1 cut(s)	1537
AjnI	CCWGG	2 cut(s)	1017, 2595
AleI	CACNNNNGTG	1 cut(s)	1407
Alw21I	GWGCWC	5 cut(s)	277, 488, 739, 1620, 2028
Alw26I	GTCTC	5 cut(s)	30, 459, 503, 1606, 2900
AlwI	GGATC	1 cut(s)	645
AlwNI	CAGNNNCTG	2 cut(s)	437, 1208
Ama87I	CYCGRG	1 cut(s)	902
AoxI	GGCC	3 cut(s)	184, 291, 553
ApaI	GGGCCC	1 cut(s)	557
ApoI	RAATTY	8 cut(s)	442, 763, 1553, 1642, 1750, 1996, 2260, 2731
AseI	ATTAAT	1 cut(s)	687
Asp718I	GGTACC	1 cut(s)	848
AspA2I	CCTAGG	1 cut(s)	916
AspLEI	GCGC	7 cut(s)	119, 183, 245, 1141, 2041, 2250, 2988
AspS9I	GGNCC	6 cut(s)	291, 553, 554, 679, 1510, 1723
AsuC2I	CCSGG	2 cut(s)	1886, 2554
AsuHPI	GGTGA	3 cut(s)	19, 602, 1411
AsuII	TTCGAA	1 cut(s)	210
AvaI	CYCGRG	1 cut(s)	902
AvaII	GGWCC	3 cut(s)	679, 1510, 1723
AvrII	CCTAGG	1 cut(s)	916
BaeGI	GKGCMC	1 cut(s)	557
BanI	GGYRCC	4 cut(s)	116, 602, 848, 2599
BanII	GRGCYC	3 cut(s)	488, 557, 2407
Bbv12I	GWGCWC	5 cut(s)	277, 488, 739, 1620, 2028
BceAI	ACGGC	3 cut(s)	118, 160, 171
BciT130I	CCWGG	2 cut(s)	1019, 2597
BciVI	GTATCC	2 cut(s)	828, 1025
BclI	TGATCA	4 cut(s)	355, 592, 984, 1948
BcnI	CCSGG	2 cut(s)	1886, 2554
BcoDI	GTCTC	5 cut(s)	30, 459, 503, 1606, 2900
BcuI	ACTAGT	1 cut(s)	1537
BfaI	CTAG	6 cut(s)	732, 917, 932, 1538, 1658, 2120
BfmI	CTRYAG	6 cut(s)	339, 456, 469, 712, 1846, 2627
BfoI	RGCGCY	3 cut(s)	120, 246, 2042
BfrI	CTTAAG	2 cut(s)	1394, 2333
BfuI	GTATCC	2 cut(s)	828, 1025
BlnI	CCTAGG	1 cut(s)	916
BmcAI	AGTACT	1 cut(s)	2363
Bme1390I	CCNGG	4 cut(s)	1019, 1886, 2554, 2597
Bme18I	GGWCC	3 cut(s)	679, 1510, 1723
BmeT110I	CYCGRG	1 cut(s)	902
BmgT120I	GGNCC	6 cut(s)	291, 553, 554, 679, 1510, 1723
BmiI	GGNNCC	9 cut(s)	118, 305, 555, 556, 604, 850, 2385, 2443, 2601
BmrFI	CCNGG	4 cut(s)	1019, 1886, 2554, 2597
BmsI	GCATC	6 cut(s)	985, 1195, 1425, 1565, 1587, 2099
BplI	GAGNNNNNCTC	2 cut(s)	317, 349
BpmI	CTGGAG	3 cut(s)	772, 2078, 2924
Bpu10I	CCTNAGC	1 cut(s)	2144
Bpu14I	TTCGAA	1 cut(s)	210
BpuEI	CTTGAG	2 cut(s)	1382, 1481
BpuMI	CCSGG	2 cut(s)	1886, 2554
Bsa29I	ATCGAT	1 cut(s)	2859
BsaAI	YACGTR	2 cut(s)	1295, 2963
BsaBI	GATNNNNATC	2 cut(s)	1088, 1566
BsaHI	GRCGYC	1 cut(s)	117
BsaI	GGTCTC	1 cut(s)	1606
BsaJI	CCNNGG	7 cut(s)	31, 308, 318, 916, 954, 1422, 1833
BsaWI	WCCGGW	1 cut(s)	2619
BsaXI	ACNNNNNCTCC	2 cut(s)	2947, 2977
Bsc4I	CCNNNNNNNGG	7 cut(s)	300, 418, 539, 955, 2222, 2425, 2539
Bse1I	ACTGG	4 cut(s)	447, 1976, 2309, 2430
Bse3DI	GCAATG	6 cut(s)	154, 234, 423, 1661, 1706, 2243
Bse8I	GATNNNNATC	2 cut(s)	1088, 1566
BseBI	CCWGG	2 cut(s)	1019, 2597
BseCI	ATCGAT	1 cut(s)	2859
BseDI	CCNNGG	7 cut(s)	31, 308, 318, 916, 954, 1422, 1833
BseGI	GGATG	7 cut(s)	222, 259, 586, 639, 2075, 2090, 2404
BseJI	GATNNNNATC	2 cut(s)	1088, 1566
BseLI	CCNNNNNNNGG	7 cut(s)	300, 418, 539, 955, 2222, 2425, 2539
BseMI	GCAATG	6 cut(s)	154, 234, 423, 1661, 1706, 2243
BseMII	CTCAG	4 cut(s)	167, 260, 2041, 2577
BseNI	ACTGG	4 cut(s)	447, 1976, 2309, 2430
BseRI	GAGGAG	2 cut(s)	563, 2480
BseSI	GKGCMC	1 cut(s)	557
BseX3I	CGGCCG	1 cut(s)	184
Bsh1236I	CGCG	1 cut(s)	183
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	3 cut(s)	186, 293, 555
BshNI	GGYRCC	4 cut(s)	116, 602, 848, 2599
BshVI	ATCGAT	1 cut(s)	2859
BsiEI	CGRYCG	1 cut(s)	187
BsiHKAI	GWGCWC	5 cut(s)	277, 488, 739, 1620, 2028
BsiHKCI	CYCGRG	1 cut(s)	902
BsiSI	CCGG	3 cut(s)	1885, 2553, 2620
BslFI	GGGAC	4 cut(s)	950, 1995, 2162, 2913
BslI	CCNNNNNNNGG	7 cut(s)	300, 418, 539, 955, 2222, 2425, 2539
BsmAI	GTCTC	5 cut(s)	30, 459, 503, 1606, 2900
BsmBI	CGTCTC	1 cut(s)	30
BsmFI	GGGAC	4 cut(s)	950, 1995, 2162, 2913
BsnI	GGCC	3 cut(s)	186, 293, 555
Bso31I	GGTCTC	1 cut(s)	1606
BsoBI	CYCGRG	1 cut(s)	902
Bsp119I	TTCGAA	1 cut(s)	210
Bsp120I	GGGCCC	1 cut(s)	553
Bsp1286I	GDGCHC	7 cut(s)	277, 488, 557, 739, 1620, 2028, 2407
Bsp143I	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
BspACI	CCGC	6 cut(s)	65, 183, 814, 1081, 1223, 1497
BspANI	GGCC	3 cut(s)	186, 293, 555
BspCNI	CTCAG	4 cut(s)	166, 259, 2040, 2578
BspDI	ATCGAT	1 cut(s)	2859
BspFNI	CGCG	1 cut(s)	183
BspHI	TCATGA	2 cut(s)	75, 739
BspLI	GGNNCC	9 cut(s)	118, 305, 555, 556, 604, 850, 2385, 2443, 2601
BspMAI	CTGCAG	3 cut(s)	343, 460, 2631
BspPI	GGATC	1 cut(s)	645
BspQI	GCTCTTC	1 cut(s)	2412
BspT104I	TTCGAA	1 cut(s)	210
BspT107I	GGYRCC	4 cut(s)	116, 602, 848, 2599
BspTI	CTTAAG	2 cut(s)	1394, 2333
BspTNI	GGTCTC	1 cut(s)	1606
BsrDI	GCAATG	6 cut(s)	154, 234, 423, 1661, 1706, 2243
BsrI	ACTGG	4 cut(s)	447, 1976, 2309, 2430
BssECI	CCNNGG	7 cut(s)	31, 308, 318, 916, 954, 1422, 1833
BssMI	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
BssNI	GRCGYC	1 cut(s)	117
BssT1I	CCWWGG	4 cut(s)	31, 308, 916, 954
Bst2UI	CCWGG	2 cut(s)	1019, 2597
Bst6I	CTCTTC	3 cut(s)	42, 892, 2412
BstACI	GRCGYC	1 cut(s)	117
BstAFI	CTTAAG	2 cut(s)	1394, 2333
BstAPI	GCANNNNNTGC	1 cut(s)	2171
BstBAI	YACGTR	2 cut(s)	1295, 2963
BstBI	TTCGAA	1 cut(s)	210
BstC8I	GCNNGC	8 cut(s)	378, 1143, 1692, 2252, 2356, 2900, 2971, 3002
BstDEI	CTNAG	6 cut(s)	153, 246, 1985, 2027, 2144, 2586
BstDSI	CCRYGG	1 cut(s)	1833
BstF5I	GGATG	7 cut(s)	222, 259, 586, 639, 2075, 2090, 2404
BstFNI	CGCG	1 cut(s)	183
BstH2I	RGCGCY	3 cut(s)	120, 246, 2042
BstHHI	GCGC	7 cut(s)	119, 183, 245, 1141, 2041, 2250, 2988
BstKTI	GATC	8 cut(s)	75, 358, 595, 640, 728, 987, 1174, 1951
BstMAI	GTCTC	5 cut(s)	30, 459, 503, 1606, 2900
BstMBI	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
BstMCI	CGRYCG	1 cut(s)	187
BstNI	CCWGG	2 cut(s)	1019, 2597
BstNSI	RCATGY	6 cut(s)	1459, 2527, 2578, 2704, 2902, 2973
BstSCI	CCNGG	4 cut(s)	1017, 1884, 2552, 2595
BstSFI	CTRYAG	6 cut(s)	339, 456, 469, 712, 1846, 2627
BstSLI	GKGCMC	1 cut(s)	557
BstUI	CGCG	1 cut(s)	183
BstX2I	RGATCY	1 cut(s)	637
BstYI	RGATCY	1 cut(s)	637
BstZI	CGGCCG	1 cut(s)	184
Bsu15I	ATCGAT	1 cut(s)	2859
BsuI	GTATCC	2 cut(s)	828, 1025
BsuRI	GGCC	3 cut(s)	186, 293, 555
BsuTUI	ATCGAT	1 cut(s)	2859
BtgI	CCRYGG	1 cut(s)	1833
BtgZI	GCGATG	1 cut(s)	1788
BtsCI	GGATG	7 cut(s)	222, 259, 586, 639, 2075, 2090, 2404
BtsI	GCAGTG	5 cut(s)	358, 577, 725, 1694, 2554
BtsIMutI	CAGTG	7 cut(s)	254, 358, 577, 725, 1694, 2554, 2874
Cac8I	GCNNGC	8 cut(s)	378, 1143, 1692, 2252, 2356, 2900, 2971, 3002
CaiI	CAGNNNCTG	2 cut(s)	437, 1208
CciI	TCATGA	2 cut(s)	75, 739
CfoI	GCGC	7 cut(s)	119, 183, 245, 1141, 2041, 2250, 2988
Cfr13I	GGNCC	6 cut(s)	291, 553, 554, 679, 1510, 1723
ClaI	ATCGAT	1 cut(s)	2859
CseI	GACGC	4 cut(s)	270, 1037, 1326, 2132
Csp6I	GTAC	5 cut(s)	849, 1342, 1541, 2362, 2790
CviQI	GTAC	5 cut(s)	849, 1342, 1541, 2362, 2790
DdeI	CTNAG	6 cut(s)	153, 246, 1985, 2027, 2144, 2586
DinI	GGCGCC	1 cut(s)	118
DpnI	GATC	8 cut(s)	74, 357, 594, 639, 727, 986, 1173, 1950
DpnII	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
DraI	TTTAAA	2 cut(s)	2712, 2736
EaeI	YGGCCR	1 cut(s)	184
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	3 cut(s)	42, 892, 2412
EarI	CTCTTC	3 cut(s)	42, 892, 2412
EciI	GGCGGA	1 cut(s)	80
Ecl136II	GAGCTC	1 cut(s)	486
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	4 cut(s)	31, 308, 916, 954
Eco24I	GRGCYC	3 cut(s)	488, 557, 2407
Eco31I	GGTCTC	1 cut(s)	1606
Eco32I	GATATC	1 cut(s)	1086
Eco47I	GGWCC	3 cut(s)	679, 1510, 1723
Eco52I	CGGCCG	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	486
Eco57I	CTGAAG	4 cut(s)	414, 1634, 2106, 2828
Eco88I	CYCGRG	1 cut(s)	902
EcoICRI	GAGCTC	1 cut(s)	486
EcoO109I	RGGNCCY	3 cut(s)	291, 553, 554
EcoRII	CCWGG	2 cut(s)	1017, 2595
EcoRV	GATATC	1 cut(s)	1086
EcoT14I	CCWWGG	4 cut(s)	31, 308, 916, 954
EcoT22I	ATGCAT	2 cut(s)	1580, 2529
EcoT38I	GRGCYC	3 cut(s)	488, 557, 2407
EgeI	GGCGCC	1 cut(s)	118
EheI	GGCGCC	1 cut(s)	118
ErhI	CCWWGG	4 cut(s)	31, 308, 916, 954
Esp3I	CGTCTC	1 cut(s)	30
FalI	AAGNNNNNCTT	2 cut(s)	1710, 1742
FaqI	GGGAC	4 cut(s)	950, 1995, 2162, 2913
FauNDI	CATATG	2 cut(s)	660, 806
FbaI	TGATCA	4 cut(s)	355, 592, 984, 1948
FblI	GTMKAC	1 cut(s)	1489
FokI	GGATG	7 cut(s)	229, 266, 593, 646, 2077, 2082, 2411
FriOI	GRGCYC	3 cut(s)	488, 557, 2407
FspBI	CTAG	6 cut(s)	732, 917, 932, 1538, 1658, 2120
GlaI	GCGC	7 cut(s)	118, 182, 244, 1140, 2040, 2249, 2987
GsuI	CTGGAG	3 cut(s)	772, 2078, 2924
HaeII	RGCGCY	3 cut(s)	120, 246, 2042
HaeIII	GGCC	3 cut(s)	186, 293, 555
HapII	CCGG	3 cut(s)	1885, 2553, 2620
HgaI	GACGC	4 cut(s)	270, 1037, 1326, 2132
HhaI	GCGC	7 cut(s)	119, 183, 245, 1141, 2041, 2250, 2988
Hin1I	GRCGYC	1 cut(s)	117
Hin6I	GCGC	7 cut(s)	117, 181, 243, 1139, 2039, 2248, 2986
HinP1I	GCGC	7 cut(s)	117, 181, 243, 1139, 2039, 2248, 2986
HincII	GTYRAC	1 cut(s)	1386
HindII	GTYRAC	1 cut(s)	1386
HindIII	AAGCTT	3 cut(s)	1196, 1397, 2810
HpaII	CCGG	3 cut(s)	1885, 2553, 2620
HphI	GGTGA	3 cut(s)	19, 602, 1411
Hpy166II	GTNNAC	6 cut(s)	1386, 1490, 1504, 1723, 2105, 2521
Hpy8I	GTNNAC	6 cut(s)	1386, 1490, 1504, 1723, 2105, 2521
Hpy99I	CGWCG	4 cut(s)	137, 286, 1342, 2947
HpyAV	CCTTC	5 cut(s)	73, 206, 1523, 2059, 2571
HpyCH4IV	ACGT	5 cut(s)	1294, 1802, 2689, 2742, 2962
HpyF3I	CTNAG	6 cut(s)	153, 246, 1985, 2027, 2144, 2586
HpySE526I	ACGT	5 cut(s)	1294, 1802, 2689, 2742, 2962
Hsp92I	GRCGYC	1 cut(s)	117
HspAI	GCGC	7 cut(s)	117, 181, 243, 1139, 2039, 2248, 2986
KasI	GGCGCC	1 cut(s)	116
KpnI	GGTACC	1 cut(s)	852
Ksp22I	TGATCA	4 cut(s)	355, 592, 984, 1948
Kzo9I	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
LguI	GCTCTTC	1 cut(s)	2412
LmnI	GCTCC	5 cut(s)	790, 1471, 1623, 2383, 2467
LweI	GCATC	6 cut(s)	985, 1195, 1425, 1565, 1587, 2099
MaeI	CTAG	6 cut(s)	732, 917, 932, 1538, 1658, 2120
MaeII	ACGT	5 cut(s)	1294, 1802, 2689, 2742, 2962
MaeIII	GTNAC	6 cut(s)	1130, 1276, 1451, 1989, 2346, 2622
MalI	GATC	8 cut(s)	74, 357, 594, 639, 727, 986, 1173, 1950
MboI	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
MboII	GAAGA	7 cut(s)	16, 59, 629, 755, 879, 2399, 2834
MfeI	CAATTG	4 cut(s)	1480, 2098, 2604, 2785
MflI	RGATCY	1 cut(s)	637
MhlI	GDGCHC	7 cut(s)	277, 488, 557, 739, 1620, 2028, 2407
Mly113I	GGCGCC	1 cut(s)	117
MlyI	GAGTC	9 cut(s)	266, 1256, 1373, 2201, 2229, 2327, 2366, 2488, 2902
Mph1103I	ATGCAT	2 cut(s)	1580, 2529
MslI	CAYNNNNRTG	2 cut(s)	1407, 1699
MspA1I	CMGCKG	3 cut(s)	1223, 1499, 2171
MspCI	CTTAAG	2 cut(s)	1394, 2333
MspI	CCGG	3 cut(s)	1885, 2553, 2620
MspR9I	CCNGG	4 cut(s)	1019, 1886, 2554, 2597
MunI	CAATTG	4 cut(s)	1480, 2098, 2604, 2785
MvaI	CCWGG	2 cut(s)	1019, 2597
MvnI	CGCG	1 cut(s)	183
NarI	GGCGCC	1 cut(s)	117
NciI	CCSGG	2 cut(s)	1886, 2554
NdeI	CATATG	2 cut(s)	660, 806
NdeII	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
NlaIV	GGNNCC	9 cut(s)	118, 305, 555, 556, 604, 850, 2385, 2443, 2601
NmeAIII	GCCGAG	3 cut(s)	314, 722, 1403
NmuCI	GTSAC	1 cut(s)	1989
NsiI	ATGCAT	2 cut(s)	1580, 2529
NspI	RCATGY	6 cut(s)	1459, 2527, 2578, 2704, 2902, 2973
NspV	TTCGAA	1 cut(s)	210
OliI	CACNNNNGTG	1 cut(s)	1407
PaeI	GCATGC	2 cut(s)	2902, 2973
PaeR7I	CTCGAG	1 cut(s)	902
PagI	TCATGA	2 cut(s)	75, 739
PciI	ACATGT	1 cut(s)	2700
PciSI	GCTCTTC	1 cut(s)	2412
PcsI	WCGNNNNNNNCGW	1 cut(s)	129
PfeI	GAWTC	8 cut(s)	362, 563, 772, 898, 1567, 1739, 1842, 2266
PflFI	GACNNNGTC	1 cut(s)	1047
PflMI	CCANNNNNTGG	3 cut(s)	418, 955, 2425
PfoI	TCCNGGA	1 cut(s)	1017
PleI	GAGTC	9 cut(s)	265, 1255, 1372, 2200, 2229, 2326, 2366, 2488, 2902
PluTI	GGCGCC	1 cut(s)	120
PpsI	GAGTC	9 cut(s)	265, 1255, 1372, 2200, 2229, 2326, 2366, 2488, 2902
Ppu21I	YACGTR	2 cut(s)	1295, 2963
PscI	ACATGT	1 cut(s)	2700
PshBI	ATTAAT	1 cut(s)	687
Psp124BI	GAGCTC	1 cut(s)	488
Psp1406I	AACGTT	1 cut(s)	1802
Psp6I	CCWGG	2 cut(s)	1017, 2595
PspGI	CCWGG	2 cut(s)	1017, 2595
PspN4I	GGNNCC	9 cut(s)	118, 305, 555, 556, 604, 850, 2385, 2443, 2601
PspOMI	GGGCCC	1 cut(s)	553
PspPI	GGNCC	6 cut(s)	291, 553, 554, 679, 1510, 1723
PstI	CTGCAG	3 cut(s)	343, 460, 2631
PstNI	CAGNNNCTG	2 cut(s)	437, 1208
PsuI	RGATCY	1 cut(s)	637
PsyI	GACNNNGTC	1 cut(s)	1047
PvuII	CAGCTG	1 cut(s)	2171
RsaI	GTAC	5 cut(s)	850, 1343, 1542, 2363, 2791
RsaNI	GTAC	5 cut(s)	849, 1342, 1541, 2362, 2790
RseI	CAYNNNNRTG	2 cut(s)	1407, 1699
SacI	GAGCTC	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	2412
Sau3AI	GATC	8 cut(s)	72, 355, 592, 637, 725, 984, 1171, 1948
Sau96I	GGNCC	6 cut(s)	291, 553, 554, 679, 1510, 1723
ScaI	AGTACT	1 cut(s)	2363
SchI	GAGTC	9 cut(s)	266, 1256, 1373, 2201, 2229, 2327, 2366, 2488, 2902
ScrFI	CCNGG	4 cut(s)	1019, 1886, 2554, 2597
SduI	GDGCHC	7 cut(s)	277, 488, 557, 739, 1620, 2028, 2407
SfaNI	GCATC	6 cut(s)	985, 1195, 1425, 1565, 1587, 2099
SfcI	CTRYAG	6 cut(s)	339, 456, 469, 712, 1846, 2627
SfoI	GGCGCC	1 cut(s)	118
Sfr274I	CTCGAG	1 cut(s)	902
SfuI	TTCGAA	1 cut(s)	210
SinI	GGWCC	3 cut(s)	679, 1510, 1723
SlaI	CTCGAG	1 cut(s)	902
SmiMI	CAYNNNNRTG	2 cut(s)	1407, 1699
SmlI	CTYRAG	5 cut(s)	902, 1361, 1394, 1460, 2333
SmoI	CTYRAG	5 cut(s)	902, 1361, 1394, 1460, 2333
SpeI	ACTAGT	1 cut(s)	1537
SphI	GCATGC	2 cut(s)	2902, 2973
SsiI	CCGC	6 cut(s)	65, 183, 814, 1081, 1223, 1497
SspDI	GGCGCC	1 cut(s)	116
SspI	AATATT	4 cut(s)	538, 841, 1531, 2659
SspMI	CTAG	6 cut(s)	732, 917, 932, 1538, 1658, 2120
SstI	GAGCTC	1 cut(s)	488
StyD4I	CCNGG	4 cut(s)	1017, 1884, 2552, 2595
StyI	CCWWGG	4 cut(s)	31, 308, 916, 954
TaiI	ACGT	5 cut(s)	1297, 1805, 2692, 2745, 2965
TatI	WGTACW	3 cut(s)	1540, 2361, 2789
TauI	GCSGC	2 cut(s)	186, 1226
TfiI	GAWTC	8 cut(s)	362, 563, 772, 898, 1567, 1739, 1842, 2266
TscAI	CASTG	7 cut(s)	254, 358, 577, 725, 1701, 2554, 2874
TseFI	GTSAC	1 cut(s)	1989
Tsp45I	GTSAC	1 cut(s)	1989
TspRI	CASTG	7 cut(s)	254, 358, 577, 725, 1701, 2554, 2874
Tth111I	GACNNNGTC	1 cut(s)	1047
Van91I	CCANNNNNTGG	3 cut(s)	418, 955, 2425
Vha464I	CTTAAG	2 cut(s)	1394, 2333
VpaK11BI	GGWCC	3 cut(s)	679, 1510, 1723
VspI	ATTAAT	1 cut(s)	687
XapI	RAATTY	8 cut(s)	442, 763, 1553, 1642, 1750, 1996, 2260, 2731
XbaI	TCTAGA	1 cut(s)	2119
XceI	RCATGY	6 cut(s)	1459, 2527, 2578, 2704, 2902, 2973
XhoI	CTCGAG	1 cut(s)	902
XmaJI	CCTAGG	1 cut(s)	916
XmiI	GTMKAC	1 cut(s)	1489
XspI	CTAG	6 cut(s)	732, 917, 932, 1538, 1658, 2120
ZrmI	AGTACT	1 cut(s)	2363
Zsp2I	ATGCAT	2 cut(s)	1580, 2529

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.