Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002888.1

Orthogroup ID

OG0008606

Physical Location & Seq

Genomic Coordinates Forward (+)

192741 .. 199076

Gene Structure 6336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002888.1_g000043.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3147 bp

atgaagatttggtgctgcccgtgcttcaccgtagaagacgaaccgcaagaggaggagcgtaaggaggccatgaaggagggcgatttcgtaaataaggtgaattccgagggggttgtggcgaatgaggtggacgaggaggaggaggagccgcgattggagctcgctgccagtgacggcggcaatgcggagcgggacccactgggaatggcgaatgaggtggaggaggaggaggaggaggagccgcgattggagctcgctgccagtgacggcggtggccgtggccgtgaccgtgaccgtgacgatcacctgagaatgtttgaagggatggtccaggcaatgcggagcgggacccactgggacgagtcggtgtgtgttggcgctctcgacacgttgagggccgcgattaggtctcctcggtggtcggagggcgagactagctcggctcctgtggcggctgccgccgaggaggacgacggcgatcacgattcgcatcataagcgagctaaagttcactccttttctcatgatttccattatgcaatgacaatgtcttcaggtgctggaaattctagttcctctgacagagactacggcagaactcaaggctctaatgttctgtataagagcgaaacttttttccatagttttacaccaaacattggtggtgaggagaattcctatgactctggcagtgggaaagatgatgaaagagataagggtgacacttcaacaactgaagattttgaagttcgtatggatcttacagatgatctattacacatggttttctctttcttggaccacatcaatctttgccgagctgcaatagtctgcaggcaatggcgagctgctagtgctcatgaagatttctggaggtgcttgaattttgagaatcggaacatatctgtagagcaatttgaggatatatgttggcggtatccgaatgccacagaattgaatatttctggtacccctgctattccgttgcttgtgatgacagcgatcacatcattgaggaatcttgaagttttaactctaggcaaagggacaataggagatctttttttccattccttggcagattgtctgatgttgaaaagtttgatagtcaatgatgctactcttggtactggtattcaggagatacctataaaccacgatagactgcgtcatcttgaactgacaaaatgtcgtgttatgcgcatatctatcaggtgtccacaactggagacactgtcaatgaagcgcagtaatatggcccaggctgttctcaatagccctctcttgcgcgatcttgatttaggctcttgccacaagctttccgatgctgcaattcgttcagcagcaacttcttgtccccaattggagtcactagatatgtcaaattgttcatgtgttagtgatgaaacactacgtgagatagctcttacttgtgcaaatctccatgttctcaatgcatcatactgtcctaatgtatccctagagtctgtaagactgccaatgttgacagttctcaagctacacagttgtgagggcatcacttccgcttccatggttgcaatatcaaatagttacatgctggaggttttggagcttgacaattgcagccttcttacatctgtgatcttggatcttccacgcttgcagaatattagactagtacattgtcgcaaatttgccgacctgaatctacgaactctcatgctgtcgtctataatggtgtctaattgccctgtgctccaccgtatcagcatcacttcaaattcacttcaaaaactatcattgcagaagcaagagagcttaactacattggcactgcaatgcccaagtttacaagaagtggatctcacagattgtgaatctctaacaaattctatatgcaatgttttcagtgatggtggtgggtgccccatgcttaaaactttagttctcgaaaactgtgagagcttaacagcggttcgattctgcagcacgtctttagtcagtctttcacttgttggttgtcggggaatcacttctcttgaactgacatgcccgtatcttgaacaagtttctttggatggttgtgatcatcttgaaagtgcagcattttttccggttggtcttaggtcactaaatttgggaatatgtcccaaactgaacgccctcagtatcgacgcaccaaacatggtgctgcttgagttgaagggatgtggtgtattgtctgaagcatcaattaattgtccactcttaacgtctctggacgcttccttttgcagccagcttagggacaattgcttgtctgcaactgccgcttcatgtccactgattgagtctttaattctaatgtcatgcccctcagttggttctgatggactctattctctgcactggcttccaaatttgattgtgcttgatttgtcatacactttcttaatgagcttgaagccagtattcgagtcttgcattaagctaaaggttttaaaattacaagcatgcaagtatctatctgattcatccctggagcctctttacaaggaaggggctcttccagctctccaggaattggatttgtcttatggaaccctctgtcagtctgctattgaagagcttctttctttctgtacacagttaactcatgtgagcttgaatggctgtgtgaacatgcatgacctgaactggggtagcagtggtcggcagcctcttgtaaagtctagtatctctgtcccatcacttgaatatgtccatgagccagttgagtatggaaaccggctactgcagaatctcaactgtgtgggttgtccaaatatcaggaaagttcacattccagtagcagcaggttgtttccatttgacttcattgaacctttctctgtctgcaaatttgaaggacgtagaagttgcttgtttcaacctatgctttcttaacctgagcaattgttattctttggaagttctgaagcttgactgtccaaaattgactagtctctttcttcagtcttgcaacatgaatgaagcggcagtggaagctgcaatatcaaaatgtagcatgctggagactcttgatgtccgtttttgtcccaagatatgtccattaagcatgggaagattacgtgctgtgtgcccaagtttgaagcgcatctttagcagcctgtcaccacagtcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009653 GO:0010252 GO:0032502 GO:0042592 GO:0048646 GO:0048856 GO:0048878 GO:0065007 GO:0065008 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

1048

Amino Acids

115.26

Weight (kDa)

4.93

Isoelectric Point (pI)

48.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33210
fragaria_vesca	FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970
malus_domestica	MD08G1071300.v1.1 MD15G1049900.v1.1
prunus_persica	Prupe.1G404200_v2.0.a1
pyrus_communis	pycom08g05910 pycom08g05920 pycom15g04850
rosa_chinensis	RchiOBHm_Chr6g0311801
rosa_laevigata	RLG00000010373
rosa_multiflora	Rmu_sc0002888.1_g000043
rosa_roxburghii	Rroxscaffold_7G00157300
rosa_samantha	Rh6AG507100 Rh6BG518100 Rh6CG523600 Rh6DG509400
rosa_wichuraiana	Rw6G044120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1202
Acc36I	ACCTGC	1 cut(s)	2807
Acc65I	GGTACC	1 cut(s)	968
AccB1I	GGYRCC	2 cut(s)	968, 1905
AccB7I	CCANNNNNTGG	3 cut(s)	659, 1075, 2545
AccBSI	CCGCTC	2 cut(s)	190, 345
AccII	CGCG	4 cut(s)	151, 244, 401, 1290
AclWI	GGATC	3 cut(s)	765, 1638, 1851
AcoI	YGGCCR	2 cut(s)	274, 280
AcuI	CTGAAG	5 cut(s)	537, 756, 2226, 2957, 2957
AdeI	CACNNNGTG	1 cut(s)	1415
AfaI	GTAC	4 cut(s)	970, 1129, 1662, 2605
AfiI	CCNNNNNNNGG	7 cut(s)	405, 659, 1075, 2266, 2342, 2545, 2659
AflIII	ACRYGT	1 cut(s)	387
AhdI	GACNNNNNGTC	1 cut(s)	1188
AhlI	ACTAGT	2 cut(s)	1657, 2960
AjiI	CACGTC	1 cut(s)	1974
AjnI	CCWGG	4 cut(s)	330, 1260, 2499, 2538
AleI	CACNNNNGTG	1 cut(s)	1527
Alw21I	GWGCWC	4 cut(s)	162, 255, 859, 1740
Alw26I	GTCTC	7 cut(s)	414, 425, 579, 1223, 2241, 2969, 3029
AlwI	GGATC	3 cut(s)	765, 1638, 1851
AlwNI	CAGNNNCTG	1 cut(s)	560
AoxI	GGCC	5 cut(s)	66, 274, 280, 396, 1257
AseI	ATTAAT	1 cut(s)	2217
Asp700I	GAANNNNTTC	2 cut(s)	2014, 2589
Asp718I	GGTACC	1 cut(s)	968
AspLEI	GCGC	5 cut(s)	380, 1203, 1248, 1290, 3117
AspS9I	GGNCC	6 cut(s)	193, 328, 348, 396, 799, 1258
AsuHPI	GGTGA	6 cut(s)	19, 109, 296, 677, 731, 3126
AvaII	GGWCC	4 cut(s)	193, 328, 348, 799
BaeGI	GKGCMC	2 cut(s)	1910, 3104
BanI	GGYRCC	2 cut(s)	968, 1905
BanII	GRGCYC	3 cut(s)	162, 255, 2527
BbsI	GAAGAC	2 cut(s)	42, 543
Bbv12I	GWGCWC	4 cut(s)	162, 255, 859, 1740
BccI	CCATC	5 cut(s)	319, 1889, 2054, 2345, 2716
BceAI	ACGGC	6 cut(s)	190, 261, 267, 283, 490, 607
BciT130I	CCWGG	4 cut(s)	332, 1262, 2501, 2540
BciVI	GTATCC	2 cut(s)	948, 1486
BclI	TGATCA	1 cut(s)	2068
BcoDI	GTCTC	7 cut(s)	414, 425, 579, 1223, 2241, 2969, 3029
BcuI	ACTAGT	2 cut(s)	1657, 2960
BfaI	CTAG	9 cut(s)	435, 570, 852, 1037, 1373, 1481, 1658, 2694, 2961
BfmI	CTRYAG	4 cut(s)	832, 906, 1966, 2756
BfoI	RGCGCY	1 cut(s)	381
BfuAI	ACCTGC	1 cut(s)	2807
BfuI	GTATCC	2 cut(s)	948, 1486
BglII	AGATCT	1 cut(s)	1057
Bme1390I	CCNGG	4 cut(s)	332, 1262, 2501, 2540
Bme18I	GGWCC	4 cut(s)	193, 328, 348, 799
BmeRI	GACNNNNNGTC	1 cut(s)	1188
BmgBI	CACGTC	1 cut(s)	1974
BmgT120I	GGNCC	6 cut(s)	193, 328, 348, 396, 799, 1258
BmrFI	CCNGG	4 cut(s)	332, 1262, 2501, 2540
BmrI	ACTGGG	3 cut(s)	209, 364, 2668
BmsI	GCATC	8 cut(s)	499, 1105, 1315, 1466, 1545, 1761, 2219, 3126
BmuI	ACTGGG	3 cut(s)	209, 364, 2668
BpiI	GAAGAC	2 cut(s)	42, 543
BplI	GAGNNNNNCTC	2 cut(s)	422, 454
BpmI	CTGGAG	6 cut(s)	892, 1247, 1601, 2522, 2522, 3053
Bpu10I	CCTNAGC	2 cut(s)	2264, 2909
BpuEI	CTTGAG	3 cut(s)	585, 1499, 2198
BsaAI	YACGTR	2 cut(s)	1415, 3092
BsaBI	GATNNNNATC	1 cut(s)	489
BsaI	GGTCTC	1 cut(s)	414
BsaJI	CCNNGG	8 cut(s)	105, 277, 413, 462, 1074, 1260, 1551, 2499
BsaWI	WCCGGW	1 cut(s)	2095
BsaXI	ACNNNNNCTCC	2 cut(s)	1220, 1250
Bsc4I	CCNNNNNNNGG	7 cut(s)	405, 659, 1075, 2266, 2342, 2545, 2659
Bse118I	RCCGGY	1 cut(s)	2748
Bse3DI	GCAATG	7 cut(s)	187, 342, 546, 845, 1781, 1826, 1888
Bse8I	GATNNNNATC	1 cut(s)	489
BseBI	CCWGG	4 cut(s)	332, 1262, 2501, 2540
BseDI	CCNNGG	8 cut(s)	105, 277, 413, 462, 1074, 1260, 1551, 2499
BseGI	GGATG	4 cut(s)	330, 2065, 2195, 2495
BseJI	GATNNNNATC	1 cut(s)	489
BseLI	CCNNNNNNNGG	7 cut(s)	405, 659, 1075, 2266, 2342, 2545, 2659
BseMI	GCAATG	7 cut(s)	187, 342, 546, 845, 1781, 1826, 1888
BseMII	CTCAG	4 cut(s)	299, 2161, 2352, 2900
BseSI	GKGCMC	2 cut(s)	1910, 3104
BsgI	GTGCAG	2 cut(s)	2103, 2351
Bsh1236I	CGCG	4 cut(s)	151, 244, 401, 1290
BshFI	GGCC	5 cut(s)	68, 276, 282, 398, 1259
BshNI	GGYRCC	2 cut(s)	968, 1905
BsiHKAI	GWGCWC	4 cut(s)	162, 255, 859, 1740
BsiSI	CCGG	2 cut(s)	2096, 2749
BslFI	GGGAC	9 cut(s)	206, 361, 371, 1060, 1341, 2115, 2282, 2690, 3042
BslI	CCNNNNNNNGG	7 cut(s)	405, 659, 1075, 2266, 2342, 2545, 2659
BsmAI	GTCTC	7 cut(s)	414, 425, 579, 1223, 2241, 2969, 3029
BsmBI	CGTCTC	1 cut(s)	2241
BsmFI	GGGAC	9 cut(s)	206, 361, 371, 1060, 1341, 2115, 2282, 2690, 3042
BsmI	GAATGC	1 cut(s)	949
BsnI	GGCC	5 cut(s)	68, 276, 282, 398, 1259
Bso31I	GGTCTC	1 cut(s)	414
Bsp1286I	GDGCHC	7 cut(s)	162, 255, 859, 1740, 1910, 2527, 3104
Bsp1407I	TGTACA	1 cut(s)	2603
Bsp19I	CCATGG	1 cut(s)	1551
BspANI	GGCC	5 cut(s)	68, 276, 282, 398, 1259
BspCNI	CTCAG	4 cut(s)	300, 2160, 2351, 2901
BspFNI	CGCG	4 cut(s)	151, 244, 401, 1290
BspHI	TCATGA	3 cut(s)	523, 859, 3143
BspMAI	CTGCAG	3 cut(s)	836, 1970, 2760
BspMI	ACCTGC	1 cut(s)	2807
BspPI	GGATC	3 cut(s)	765, 1638, 1851
BspQI	GCTCTTC	2 cut(s)	2532, 2580
BspT107I	GGYRCC	2 cut(s)	968, 1905
BspTNI	GGTCTC	1 cut(s)	414
BsrBI	CCGCTC	2 cut(s)	190, 345
BsrDI	GCAATG	7 cut(s)	187, 342, 546, 845, 1781, 1826, 1888
BsrFI	RCCGGY	1 cut(s)	2748
BsrGI	TGTACA	1 cut(s)	2603
BssAI	RCCGGY	1 cut(s)	2748
BssECI	CCNNGG	8 cut(s)	105, 277, 413, 462, 1074, 1260, 1551, 2499
BssT1I	CCWWGG	2 cut(s)	1074, 1551
Bst2UI	CCWGG	4 cut(s)	332, 1262, 2501, 2540
Bst6I	CTCTTC	2 cut(s)	2532, 2580
BstAUI	TGTACA	1 cut(s)	2603
BstBAI	YACGTR	2 cut(s)	1415, 3092
BstC8I	GCNNGC	9 cut(s)	162, 255, 501, 836, 846, 1643, 2261, 2476, 3029
BstDEI	CTNAG	6 cut(s)	308, 2105, 2147, 2264, 2338, 2909
BstDSI	CCRYGG	2 cut(s)	277, 1551
BstF5I	GGATG	4 cut(s)	330, 2065, 2195, 2495
BstFNI	CGCG	4 cut(s)	151, 244, 401, 1290
BstH2I	RGCGCY	1 cut(s)	381
BstHHI	GCGC	5 cut(s)	380, 1203, 1248, 1290, 3117
BstMAI	GTCTC	7 cut(s)	414, 425, 579, 1223, 2241, 2969, 3029
BstNI	CCWGG	4 cut(s)	332, 1262, 2501, 2540
BstNSI	RCATGY	5 cut(s)	1579, 2034, 2478, 2647, 3031
BstSCI	CCNGG	4 cut(s)	330, 1260, 2499, 2538
BstSFI	CTRYAG	4 cut(s)	832, 906, 1966, 2756
BstSLI	GKGCMC	2 cut(s)	1910, 3104
BstUI	CGCG	4 cut(s)	151, 244, 401, 1290
BstV2I	GAAGAC	2 cut(s)	42, 543
BstX2I	RGATCY	4 cut(s)	757, 1057, 1630, 1843
BstYI	RGATCY	4 cut(s)	757, 1057, 1630, 1843
BsuI	GTATCC	2 cut(s)	948, 1486
BsuRI	GGCC	5 cut(s)	68, 276, 282, 398, 1259
BtgI	CCRYGG	2 cut(s)	277, 1551
BtrI	CACGTC	1 cut(s)	1974
BtsCI	GGATG	4 cut(s)	330, 2065, 2195, 2495
BtsI	GCAGTG	4 cut(s)	697, 1814, 2674, 3006
BveI	ACCTGC	1 cut(s)	2807
Cac8I	GCNNGC	9 cut(s)	162, 255, 501, 836, 846, 1643, 2261, 2476, 3029
CaiI	CAGNNNCTG	1 cut(s)	560
CciI	TCATGA	3 cut(s)	523, 859, 3143
CfoI	GCGC	5 cut(s)	380, 1203, 1248, 1290, 3117
Cfr10I	RCCGGY	1 cut(s)	2748
Cfr13I	GGNCC	6 cut(s)	193, 328, 348, 396, 799, 1258
CseI	GACGC	3 cut(s)	1157, 2165, 2252
Csp6I	GTAC	4 cut(s)	969, 1128, 1661, 2604
CviQI	GTAC	4 cut(s)	969, 1128, 1661, 2604
DdeI	CTNAG	6 cut(s)	308, 2105, 2147, 2264, 2338, 2909
DraI	TTTAAA	1 cut(s)	2463
DraIII	CACNNNGTG	1 cut(s)	1415
DriI	GACNNNNNGTC	1 cut(s)	1188
EaeI	YGGCCR	2 cut(s)	274, 280
Eam1104I	CTCTTC	2 cut(s)	2532, 2580
Eam1105I	GACNNNNNGTC	1 cut(s)	1188
EarI	CTCTTC	2 cut(s)	2532, 2580
Ecl136II	GAGCTC	2 cut(s)	160, 253
Eco130I	CCWWGG	2 cut(s)	1074, 1551
Eco24I	GRGCYC	3 cut(s)	162, 255, 2527
Eco31I	GGTCTC	1 cut(s)	414
Eco47I	GGWCC	4 cut(s)	193, 328, 348, 799
Eco53kI	GAGCTC	2 cut(s)	160, 253
Eco57I	CTGAAG	5 cut(s)	537, 756, 2226, 2957, 2957
EcoICRI	GAGCTC	2 cut(s)	160, 253
EcoO109I	RGGNCCY	2 cut(s)	193, 348
EcoRI	GAATTC	2 cut(s)	100, 673
EcoRII	CCWGG	4 cut(s)	330, 1260, 2499, 2538
EcoT14I	CCWWGG	2 cut(s)	1074, 1551
EcoT22I	ATGCAT	2 cut(s)	1459, 2649
EcoT38I	GRGCYC	3 cut(s)	162, 255, 2527
ErhI	CCWWGG	2 cut(s)	1074, 1551
Esp3I	CGTCTC	1 cut(s)	2241
FalI	AAGNNNNNCTT	6 cut(s)	2511, 2543, 2577, 2609, 3104, 3136
FaqI	GGGAC	9 cut(s)	206, 361, 371, 1060, 1341, 2115, 2282, 2690, 3042
FauI	CCCGC	2 cut(s)	183, 338
FbaI	TGATCA	1 cut(s)	2068
FokI	GGATG	4 cut(s)	337, 2072, 2202, 2482
FriOI	GRGCYC	3 cut(s)	162, 255, 2527
FspAI	RTGCGCAY	1 cut(s)	1202
FspBI	CTAG	9 cut(s)	435, 570, 852, 1037, 1373, 1481, 1658, 2694, 2961
FspI	TGCGCA	1 cut(s)	1202
GlaI	GCGC	5 cut(s)	379, 1202, 1247, 1289, 3116
GsuI	CTGGAG	6 cut(s)	892, 1247, 1601, 2522, 2522, 3053
HaeII	RGCGCY	1 cut(s)	381
HaeIII	GGCC	5 cut(s)	68, 276, 282, 398, 1259
HapII	CCGG	2 cut(s)	2096, 2749
HgaI	GACGC	3 cut(s)	1157, 2165, 2252
HhaI	GCGC	5 cut(s)	380, 1203, 1248, 1290, 3117
Hin6I	GCGC	5 cut(s)	378, 1201, 1246, 1288, 3115
HinP1I	GCGC	5 cut(s)	378, 1201, 1246, 1288, 3115
HincII	GTYRAC	2 cut(s)	1506, 2613
HindII	GTYRAC	2 cut(s)	1506, 2613
HindIII	AAGCTT	2 cut(s)	1316, 2939
HpaI	GTTAAC	1 cut(s)	2613
HpaII	CCGG	2 cut(s)	2096, 2749
HphI	GGTGA	6 cut(s)	19, 109, 296, 677, 731, 3126
Hpy99I	CGWCG	2 cut(s)	476, 2159
HpyAV	CCTTC	6 cut(s)	67, 314, 1619, 2179, 2513, 2860
HpyCH4IV	ACGT	6 cut(s)	389, 1414, 1973, 2234, 2871, 3091
HpyF3I	CTNAG	6 cut(s)	308, 2105, 2147, 2264, 2338, 2909
HpySE526I	ACGT	6 cut(s)	389, 1414, 1973, 2234, 2871, 3091
HspAI	GCGC	5 cut(s)	378, 1201, 1246, 1288, 3115
KflI	GGGWCCC	2 cut(s)	193, 348
KpnI	GGTACC	1 cut(s)	972
Ksp22I	TGATCA	1 cut(s)	2068
KspAI	GTTAAC	1 cut(s)	2613
LguI	GCTCTTC	2 cut(s)	2532, 2580
LweI	GCATC	8 cut(s)	499, 1105, 1315, 1466, 1545, 1761, 2219, 3126
MaeI	CTAG	9 cut(s)	435, 570, 852, 1037, 1373, 1481, 1658, 2694, 2961
MaeII	ACGT	6 cut(s)	389, 1414, 1973, 2234, 2871, 3091
MbiI	CCGCTC	2 cut(s)	190, 345
MfeI	CAATTG	4 cut(s)	1361, 1600, 2272, 2914
MflI	RGATCY	4 cut(s)	757, 1057, 1630, 1843
MhlI	GDGCHC	7 cut(s)	162, 255, 859, 1740, 1910, 2527, 3104
MlyI	GAGTC	8 cut(s)	371, 677, 1376, 1493, 2321, 2349, 2447, 3031
MmeI	TCCRAC	1 cut(s)	402
Mph1103I	ATGCAT	2 cut(s)	1459, 2649
MroXI	GAANNNNTTC	2 cut(s)	2014, 2589
MslI	CAYNNNNRTG	3 cut(s)	1527, 1819, 3142
MspA1I	CMGCKG	1 cut(s)	1955
MspI	CCGG	2 cut(s)	2096, 2749
MspR9I	CCNGG	4 cut(s)	332, 1262, 2501, 2540
MunI	CAATTG	4 cut(s)	1361, 1600, 2272, 2914
Mva1269I	GAATGC	1 cut(s)	949
MvaI	CCWGG	4 cut(s)	332, 1262, 2501, 2540
MvnI	CGCG	4 cut(s)	151, 244, 401, 1290
NcoI	CCATGG	1 cut(s)	1551
NmeAIII	GCCGAG	3 cut(s)	419, 487, 842
NmuCI	GTSAC	9 cut(s)	170, 263, 284, 290, 296, 719, 1368, 2109, 3132
NsbI	TGCGCA	1 cut(s)	1202
NsiI	ATGCAT	2 cut(s)	1459, 2649
NspI	RCATGY	5 cut(s)	1579, 2034, 2478, 2647, 3031
OliI	CACNNNNGTG	1 cut(s)	1527
PaeI	GCATGC	2 cut(s)	2478, 3031
PagI	TCATGA	3 cut(s)	523, 859, 3143
PciSI	GCTCTTC	2 cut(s)	2532, 2580
PcsI	WCGNNNNNNNCGW	1 cut(s)	480
PctI	GAATGC	1 cut(s)	949
PdmI	GAANNNNTTC	2 cut(s)	2014, 2589
PfeI	GAWTC	9 cut(s)	485, 892, 1018, 1687, 1859, 1962, 2010, 2492, 2761
PflFI	GACNNNGTC	3 cut(s)	547, 1167, 1234
PflMI	CCANNNNNTGG	3 cut(s)	659, 1075, 2545
PfoI	TCCNGGA	1 cut(s)	2538
PleI	GAGTC	8 cut(s)	370, 677, 1375, 1492, 2320, 2349, 2446, 3031
PpsI	GAGTC	8 cut(s)	370, 677, 1375, 1492, 2320, 2349, 2446, 3031
Ppu21I	YACGTR	2 cut(s)	1415, 3092
PpuMI	RGGWCCY	2 cut(s)	193, 348
PshBI	ATTAAT	1 cut(s)	2217
Psp124BI	GAGCTC	2 cut(s)	162, 255
Psp5II	RGGWCCY	2 cut(s)	193, 348
Psp6I	CCWGG	4 cut(s)	330, 1260, 2499, 2538
PspGI	CCWGG	4 cut(s)	330, 1260, 2499, 2538
PspPI	GGNCC	6 cut(s)	193, 328, 348, 396, 799, 1258
PspPPI	RGGWCCY	2 cut(s)	193, 348
PstI	CTGCAG	3 cut(s)	836, 1970, 2760
PstNI	CAGNNNCTG	1 cut(s)	560
PsuI	RGATCY	4 cut(s)	757, 1057, 1630, 1843
PsyI	GACNNNGTC	3 cut(s)	547, 1167, 1234
RsaI	GTAC	4 cut(s)	970, 1129, 1662, 2605
RsaNI	GTAC	4 cut(s)	969, 1128, 1661, 2604
RseI	CAYNNNNRTG	3 cut(s)	1527, 1819, 3142
SacI	GAGCTC	2 cut(s)	162, 255
SapI	GCTCTTC	2 cut(s)	2532, 2580
Sau96I	GGNCC	6 cut(s)	193, 328, 348, 396, 799, 1258
SchI	GAGTC	8 cut(s)	371, 677, 1376, 1493, 2321, 2349, 2447, 3031
ScrFI	CCNGG	4 cut(s)	332, 1262, 2501, 2540
SduI	GDGCHC	7 cut(s)	162, 255, 859, 1740, 1910, 2527, 3104
SfaNI	GCATC	8 cut(s)	499, 1105, 1315, 1466, 1545, 1761, 2219, 3126
SfcI	CTRYAG	4 cut(s)	832, 906, 1966, 2756
SinI	GGWCC	4 cut(s)	193, 328, 348, 799
SmiMI	CAYNNNNRTG	3 cut(s)	1527, 1819, 3142
SmlI	CTYRAG	3 cut(s)	600, 1514, 2177
SmoI	CTYRAG	3 cut(s)	600, 1514, 2177
SpeI	ACTAGT	2 cut(s)	1657, 2960
SphI	GCATGC	2 cut(s)	2478, 3031
SspI	AATATT	2 cut(s)	961, 1651
SspMI	CTAG	9 cut(s)	435, 570, 852, 1037, 1373, 1481, 1658, 2694, 2961
SstI	GAGCTC	2 cut(s)	162, 255
StyD4I	CCNGG	4 cut(s)	330, 1260, 2499, 2538
StyI	CCWWGG	2 cut(s)	1074, 1551
TaiI	ACGT	6 cut(s)	392, 1417, 1976, 2237, 2874, 3094
TaqI	TCGA	5 cut(s)	384, 1932, 1960, 2154, 2436
TatI	WGTACW	2 cut(s)	1660, 2603
TauI	GCSGC	8 cut(s)	151, 180, 244, 401, 455, 461, 2294, 2999
TfiI	GAWTC	9 cut(s)	485, 892, 1018, 1687, 1859, 1962, 2010, 2492, 2761
TseFI	GTSAC	9 cut(s)	170, 263, 284, 290, 296, 719, 1368, 2109, 3132
Tsp45I	GTSAC	9 cut(s)	170, 263, 284, 290, 296, 719, 1368, 2109, 3132
TspGWI	ACGGA	2 cut(s)	972, 3038
Tth111I	GACNNNGTC	3 cut(s)	547, 1167, 1234
Van91I	CCANNNNNTGG	3 cut(s)	659, 1075, 2545
VpaK11BI	GGWCC	4 cut(s)	193, 328, 348, 799
VspI	ATTAAT	1 cut(s)	2217
XceI	RCATGY	5 cut(s)	1579, 2034, 2478, 2647, 3031
XmnI	GAANNNNTTC	2 cut(s)	2014, 2589
XspI	CTAG	9 cut(s)	435, 570, 852, 1037, 1373, 1481, 1658, 2694, 2961
Zsp2I	ATGCAT	2 cut(s)	1459, 2649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.