Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0008606

Physical Location & Seq

Genomic Coordinates Reverse (-)

2887687 .. 2893491

Gene Structure 5805 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g04850.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3009 bp

ATGAAGATTTGGTGCTGCCTATGCTTCACCCAAGGAGACGAACCCGAAGAGGACGATAGCGAGGCGAAGGCGATCATGAACGAGGGGGATTTCGGAAATGACAGCAATTCGGAGGTCGCCGTTGGGAATGGCGACGAAATTGACGGCAATGCTCAGAGTTTGGGGCTGGTGGGGAATGAGCGCGGCCGTGACGACCATCTGAGATTGTTTGAAGGGATGGTTCAGGCAATGCGCGGCGGTGGTGCTCAGTGGGACGAGTCTCTGTGTGTTGGCGCTCTTGCGTCGTTGAGGGCCTCAATTAGGAACCCTCGGCTTTCCGAAGGCGAGAGTAGCTCGGCTGCAGACGATGGTGGTGATCACGATTCGCACCATAAGCGAGCCAAAGTTCAATCCTTTAATCATGATTTCCATTATGCAATGGCAATGTCTTCAGGTGCGGGAAATTCCAGTTCATCTGCAGACAGAGACTACAGAATAAATCAGAGCTCTTTTGTTCCATTTAAGAGTGAGACATTCTTTCAAGATACTACTACTAATAATGGTGGTGAGGAGGGCCCCTTTGATTCTGGAAGTGGTAAGGATGATGAAGGGGATAATAGTGGCACCTCAAAAACAGAAGATTTAGAAGTTCGGATGGATCTTACAGATGACCTATTACATATGGTTTTCTCTTTCTTGGACCACATTCATCTTTGCCGAGCTGCAATAGTCTGCTGGCAGTGGCGATCTGCTAGTGCTCATGAAGATTTCTGGAGGTGTCTGAATTTTGAGAATCGAAGTATATCTGTGGATCAAATTGAGAAAATATGTTGGCGGTATCCCAATGCCACAGAATTGAATATTTCTGGTACCCCTGCTATTCACTTGCTTGTCATGAAAGCTATCTCTTCATTGAGGAATCTTGAGGTTTTAATCCTAGGTAAAGGGCAACTAGGGGACATCTTTTTCCATTCCTTGGCAGACTGTCAAATGTTGAAAAGTTCGATCATCAATGATGCTACTCTCGGGAATGGTATCCAGGAGATACCTATAAACCATGATAGACTCTGTCATCTTCAATTAACAAAATGTCGTGTTATGCGCATATCCATCAGGTGTCCGCAACTCGAAACTTTGTCATTGAAGCGCAGTAACATGGCGCAGGCTGTTCTTAATAGCCCTCTTTTGCATGATGTTGATATAGGCTCTTGCCACAAGCTTTCAGATGCTGCAATTCGTTCAGCGGCAACTTCATGCCCTCAATTAGAGTCTTTAGATATGTCAAATTGTTCATGTGTTAGTGATGAAACTCTACGTGAGATTGCTCTTACTTGTGCTAATCTCCATGTTCTCAATGCGTCATACTGTCCAAATATATCCCTTGAGTCTGTAAGACTGCCAATGTTGACGGTTCTTAAGCTTCACAGTTGTGAGGGCATCACTTCGGCTTCAATGGTTGCGATATCTCATAGTTACATGCTTGAGGTTTTGGAGCTTGACAATTGCAGTCTACTTACTGCTGTCAACTTGGATCTTCCACGCTTGCAGAATATTAGACTAGTACATTGTCGCAAGTTTGCTGATTTGAATCTACGATGCATCATGCTGTCATCAATAATGGTCTCTAACTGTCCTGTGCTCCATCGTATCAACATCACTTCAAATTCACTTCAGAAACTAGCTCTGCAAAAGCAAGAGAGCTTAACCACGCTGGCACTGCAATGCCAAAGTTTGCAAGAAGTGGACCTTACAGATTGTGAATGTTTAACAAATTCTATATGTGATGTTTTCAGCGATGGTGGTGGGTGTCCTTTGCTCAAAACATTAGTTCTCGAAAACTGTGAGAGCTTAACCGCAGTTCGATTCTGCAGCACTTCTATAGTCAGCCTCTCACTTGTTGGTTGCCGGGCAATTACTTCTCTTGAACTGACTTGCCCCTATCTTGAACAAGTTTCTTTAGATGGTTGCGATCATCTTGAAAGAGCAGCATTTTGTCCAGTTGGTCTTAGGTCACTAAATTTGGGAATATGTCCCAAATTGAATGTGCTCAGTATCGAAGCGCCGAATATGGTGCTGCTTGAGCTGAAGGGATGTGGCGTGTTAGCTGAAGTATCCATCAATTGTCCATTATTAACGTCTCTAGACGCTTCCTTTTGCAGGGATGATTGCTTGTCTGCAACTGCTGCTTCATGCCCGCTGATTGAGTCTTTAATTCTAATGTCATGCCCCTCTGTTGGTTCTGATGGACTCTACTCTTTGCGCTGCCTTCCAAATTTAATTGCGCTTGATTTGTCCTACACTTTCTTGATGAACTTGAAGCCAGTTTTCGAGTCTTGTATGAAACTTAAGGTGTTAAAGTTACAAGCTTGCAAGTACTTATCTGACTCATCCTTGGAGCCTCTTTACAAGGAAGGGGCTCTTCCAGCTCTCCAAGAACTGGATTTGTCTTACGGAACCCTCTGTCAGTCTGCTATTGAGGAGCTTCTTTCTTTTTGCACGCACTTAACTCATGTGAGCTTGAATGGCTGTGTGAACATGCATGACCTGAATTGGGGTAGCAGTGGCGGGCAACCTGCTGCCCTATCTGGCATGTTTTTACCTGAGAATGTGCAGGTTCCAATTGAGCAGCCAAACCGGTTACTGCAGAACCTCAACTGTGTAGGCTGTCCAAATATTAGGAAAGTTGTCATTCCACAAGCAGCACGTTGTTTCCACATGTCGTCATTAAACCTTTCTCTTTCTGCAAATTTAAAGGACGTTGATGTCGCTTGTTTCAACCTCTGCTTCCTTAATTTGAGCAATTGTACTTCTTTGGAAGTTTTGAAGCTTGACTGTCCGAAATTGACTAGTCTCTTTCTTCAGTCCTGCAACATTGATGAAGCAGCAGTGGAAGCTGCCATATCTAAATGTAGCATGCTGGAGACTCTTGATGTTCGTTTTTGTCCCAAGATAAGCACGATGAGCATGGGGAAATTACGTGCTGCATGCCCTAATTTGAAGCGCATCTTCAGCAGCCTGCAACAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009653 GO:0010252 GO:0032502 GO:0042592 GO:0048646 GO:0048856 GO:0048878 GO:0065007 GO:0065008 GO:1905393

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

F-box F-box-like

Protein Analysis

1003

Amino Acids

109.41

Weight (kDa)

5.08

Isoelectric Point (pI)

49.69

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008606)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G33210
fragaria_vesca	FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970 FvH4_2g30970
malus_domestica	MD08G1071300.v1.1 MD15G1049900.v1.1
prunus_persica	Prupe.1G404200_v2.0.a1
pyrus_communis	pycom08g05910 pycom08g05920 pycom15g04850
rosa_chinensis	RchiOBHm_Chr6g0311801
rosa_laevigata	RLG00000010373
rosa_multiflora	Rmu_sc0002888.1_g000043
rosa_roxburghii	Rroxscaffold_7G00157300
rosa_samantha	Rh6AG507100 Rh6BG518100 Rh6CG523600 Rh6DG509400
rosa_wichuraiana	Rw6G044120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2741
Acc16I	TGCGCA	1 cut(s)	1082
Acc36I	ACCTGC	2 cut(s)	2560, 2581
Acc65I	GGTACC	1 cut(s)	848
AccB1I	GGYRCC	2 cut(s)	602, 848
AccB7I	CCANNNNNTGG	2 cut(s)	955, 2416
AccI	GTMKAC	1 cut(s)	1489
AccII	CGCG	2 cut(s)	183, 234
AclWI	GGATC	3 cut(s)	645, 798, 1518
AcoI	YGGCCR	1 cut(s)	184
AcsI	RAATTY	7 cut(s)	442, 763, 1642, 1750, 1996, 2251, 2725
AcuI	CTGAAG	6 cut(s)	414, 1634, 2084, 2106, 2822, 2971
AfaI	GTAC	4 cut(s)	850, 1542, 2354, 2785
AfiI	CCNNNNNNNGG	6 cut(s)	300, 955, 2136, 2213, 2416, 2530
AflII	CTTAAG	2 cut(s)	1394, 2324
AflIII	ACRYGT	1 cut(s)	2694
AgeI	ACCGGT	1 cut(s)	2613
AhlI	ACTAGT	2 cut(s)	1537, 2825
AjnI	CCWGG	1 cut(s)	1017
AleI	CACNNNNGTG	1 cut(s)	1407
Alw21I	GWGCWC	5 cut(s)	247, 488, 739, 1620, 2028
Alw26I	GTCTC	8 cut(s)	30, 264, 459, 503, 1606, 2121, 2834, 2894
AlwI	GGATC	3 cut(s)	645, 798, 1518
AlwNI	CAGNNNCTG	1 cut(s)	1208
Ama87I	CYCGRG	1 cut(s)	1004
AoxI	GGCC	3 cut(s)	184, 291, 553
ApaI	GGGCCC	1 cut(s)	557
ApoI	RAATTY	7 cut(s)	442, 763, 1642, 1750, 1996, 2251, 2725
AsiGI	ACCGGT	1 cut(s)	2613
Asp718I	GGTACC	1 cut(s)	848
AspA2I	CCTAGG	1 cut(s)	916
AspS9I	GGNCC	5 cut(s)	291, 553, 554, 679, 1723
AsuC2I	CCSGG	1 cut(s)	1886
AsuHPI	GGTGA	3 cut(s)	19, 365, 557
AvaI	CYCGRG	1 cut(s)	1004
AvaII	GGWCC	2 cut(s)	679, 1723
AvrII	CCTAGG	1 cut(s)	916
BaeGI	GKGCMC	1 cut(s)	557
BanI	GGYRCC	2 cut(s)	602, 848
BanII	GRGCYC	3 cut(s)	488, 557, 2398
BbsI	GAAGAC	1 cut(s)	420
Bbv12I	GWGCWC	5 cut(s)	247, 488, 739, 1620, 2028
BceAI	ACGGC	3 cut(s)	104, 160, 171
BcgI	CGANNNNNNTGC	2 cut(s)	2032, 2066
BciT130I	CCWGG	1 cut(s)	1019
BciVI	GTATCC	3 cut(s)	828, 1025, 2101
BclI	TGATCA	1 cut(s)	355
BcnI	CCSGG	1 cut(s)	1886
BcoDI	GTCTC	8 cut(s)	30, 264, 459, 503, 1606, 2121, 2834, 2894
BcuI	ACTAGT	2 cut(s)	1537, 2825
BfaI	CTAG	7 cut(s)	732, 917, 932, 1538, 1658, 2120, 2826
BfmI	CTRYAG	6 cut(s)	339, 456, 469, 1846, 1857, 2621
BfoI	RGCGCY	2 cut(s)	276, 2042
BfrI	CTTAAG	2 cut(s)	1394, 2324
BfuAI	ACCTGC	2 cut(s)	2560, 2581
BfuI	GTATCC	3 cut(s)	828, 1025, 2101
BlnI	CCTAGG	1 cut(s)	916
BmcAI	AGTACT	1 cut(s)	2354
Bme1390I	CCNGG	2 cut(s)	1019, 1886
Bme18I	GGWCC	2 cut(s)	679, 1723
BmeT110I	CYCGRG	1 cut(s)	1004
BmgT120I	GGNCC	5 cut(s)	291, 553, 554, 679, 1723
BmiI	GGNNCC	8 cut(s)	305, 555, 556, 604, 850, 2376, 2434, 2595
BmrFI	CCNGG	2 cut(s)	1019, 1886
BmsI	GCATC	6 cut(s)	985, 1195, 1425, 1565, 1587, 2991
BpiI	GAAGAC	1 cut(s)	420
BplI	GAGNNNNNCTC	2 cut(s)	317, 349
BpmI	CTGGAG	2 cut(s)	772, 2918
BpuEI	CTTGAG	4 cut(s)	923, 1382, 1481, 2078
BpuMI	CCSGG	1 cut(s)	1886
BsaAI	YACGTR	2 cut(s)	1295, 2957
BsaBI	GATNNNNATC	1 cut(s)	1566
BsaI	GGTCTC	1 cut(s)	1606
BsaJI	CCNNGG	5 cut(s)	31, 308, 916, 954, 2370
BsaWI	WCCGGW	1 cut(s)	2613
Bsc4I	CCNNNNNNNGG	6 cut(s)	300, 955, 2136, 2213, 2416, 2530
Bse118I	RCCGGY	1 cut(s)	2613
Bse1I	ACTGG	4 cut(s)	447, 1976, 2300, 2421
Bse3DI	GCAATG	5 cut(s)	154, 234, 423, 429, 1706
Bse8I	GATNNNNATC	1 cut(s)	1566
BseBI	CCWGG	1 cut(s)	1019
BseDI	CCNNGG	5 cut(s)	31, 308, 916, 954, 2370
BseGI	GGATG	6 cut(s)	222, 586, 639, 2075, 2146, 2366
BseJI	GATNNNNATC	1 cut(s)	1566
BseLI	CCNNNNNNNGG	6 cut(s)	300, 955, 2136, 2213, 2416, 2530
BseMI	GCAATG	5 cut(s)	154, 234, 423, 429, 1706
BseMII	CTCAG	5 cut(s)	167, 191, 260, 2041, 2571
BseNI	ACTGG	4 cut(s)	447, 1976, 2300, 2421
BseRI	GAGGAG	2 cut(s)	563, 2471
BseSI	GKGCMC	1 cut(s)	557
BseX3I	CGGCCG	1 cut(s)	184
BsgI	GTGCAG	1 cut(s)	2609
Bsh1236I	CGCG	2 cut(s)	183, 234
Bsh1285I	CGRYCG	1 cut(s)	187
BshFI	GGCC	3 cut(s)	186, 293, 555
BshNI	GGYRCC	2 cut(s)	602, 848
BshTI	ACCGGT	1 cut(s)	2613
BsiEI	CGRYCG	1 cut(s)	187
BsiHKAI	GWGCWC	5 cut(s)	247, 488, 739, 1620, 2028
BsiHKCI	CYCGRG	1 cut(s)	1004
BsiSI	CCGG	2 cut(s)	1885, 2614
BslFI	GGGAC	4 cut(s)	266, 950, 1995, 2907
BslI	CCNNNNNNNGG	6 cut(s)	300, 955, 2136, 2213, 2416, 2530
BsmAI	GTCTC	8 cut(s)	30, 264, 459, 503, 1606, 2121, 2834, 2894
BsmBI	CGTCTC	2 cut(s)	30, 2121
BsmFI	GGGAC	4 cut(s)	266, 950, 1995, 2907
BsnI	GGCC	3 cut(s)	186, 293, 555
Bso31I	GGTCTC	1 cut(s)	1606
BsoBI	CYCGRG	1 cut(s)	1004
Bsp120I	GGGCCC	1 cut(s)	553
Bsp1286I	GDGCHC	7 cut(s)	247, 488, 557, 739, 1620, 2028, 2398
Bsp143I	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
BspANI	GGCC	3 cut(s)	186, 293, 555
BspCNI	CTCAG	5 cut(s)	166, 192, 259, 2040, 2572
BspFNI	CGCG	2 cut(s)	183, 234
BspHI	TCATGA	4 cut(s)	75, 400, 739, 873
BspLI	GGNNCC	8 cut(s)	305, 555, 556, 604, 850, 2376, 2434, 2595
BspMAI	CTGCAG	4 cut(s)	343, 460, 1850, 2625
BspMI	ACCTGC	2 cut(s)	2560, 2581
BspPI	GGATC	3 cut(s)	645, 798, 1518
BspQI	GCTCTTC	1 cut(s)	2403
BspT107I	GGYRCC	2 cut(s)	602, 848
BspTI	CTTAAG	2 cut(s)	1394, 2324
BspTNI	GGTCTC	1 cut(s)	1606
BsrDI	GCAATG	5 cut(s)	154, 234, 423, 429, 1706
BsrFI	RCCGGY	1 cut(s)	2613
BsrI	ACTGG	4 cut(s)	447, 1976, 2300, 2421
BssAI	RCCGGY	1 cut(s)	2613
BssECI	CCNNGG	5 cut(s)	31, 308, 916, 954, 2370
BssMI	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
BssT1I	CCWWGG	4 cut(s)	31, 916, 954, 2370
Bst2UI	CCWGG	1 cut(s)	1019
Bst4CI	ACNGT	9 cut(s)	965, 1346, 1390, 1406, 1610, 1820, 2636, 2813, 3003
Bst6I	CTCTTC	3 cut(s)	42, 892, 2403
BstAFI	CTTAAG	2 cut(s)	1394, 2324
BstAPI	GCANNNNNTGC	1 cut(s)	2162
BstBAI	YACGTR	2 cut(s)	1295, 2957
BstDEI	CTNAG	6 cut(s)	153, 200, 246, 1985, 2027, 2580
BstENI	CCTNNNNNAGG	2 cut(s)	298, 2134
BstF5I	GGATG	6 cut(s)	222, 586, 639, 2075, 2146, 2366
BstFNI	CGCG	2 cut(s)	183, 234
BstH2I	RGCGCY	2 cut(s)	276, 2042
BstKTI	GATC	8 cut(s)	75, 358, 640, 728, 793, 987, 1513, 1951
BstMAI	GTCTC	8 cut(s)	30, 264, 459, 503, 1606, 2121, 2834, 2894
BstMBI	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
BstMCI	CGRYCG	1 cut(s)	187
BstNI	CCWGG	1 cut(s)	1019
BstNSI	RCATGY	6 cut(s)	1459, 2518, 2572, 2698, 2896, 2967
BstSCI	CCNGG	2 cut(s)	1017, 1884
BstSFI	CTRYAG	6 cut(s)	339, 456, 469, 1846, 1857, 2621
BstSLI	GKGCMC	1 cut(s)	557
BstUI	CGCG	2 cut(s)	183, 234
BstV2I	GAAGAC	1 cut(s)	420
BstX2I	RGATCY	2 cut(s)	637, 1510
BstYI	RGATCY	2 cut(s)	637, 1510
BstZI	CGGCCG	1 cut(s)	184
BsuI	GTATCC	3 cut(s)	828, 1025, 2101
BsuRI	GGCC	3 cut(s)	186, 293, 555
BtgZI	GCGATG	1 cut(s)	1788
BtsCI	GGATG	6 cut(s)	222, 586, 639, 2075, 2146, 2366
BtsI	GCAGTG	4 cut(s)	725, 1694, 2545, 2871
BtsIMutI	CAGTG	5 cut(s)	254, 725, 1694, 2545, 2871
BveI	ACCTGC	2 cut(s)	2560, 2581
CaiI	CAGNNNCTG	1 cut(s)	1208
CciI	TCATGA	4 cut(s)	75, 400, 739, 873
Cfr10I	RCCGGY	1 cut(s)	2613
Cfr13I	GGNCC	5 cut(s)	291, 553, 554, 679, 1723
CseI	GACGC	3 cut(s)	270, 1326, 2132
Csp6I	GTAC	4 cut(s)	849, 1541, 2353, 2784
CspAI	ACCGGT	1 cut(s)	2613
CviQI	GTAC	4 cut(s)	849, 1541, 2353, 2784
DdeI	CTNAG	6 cut(s)	153, 200, 246, 1985, 2027, 2580
DpnI	GATC	8 cut(s)	74, 357, 639, 727, 792, 986, 1512, 1950
DpnII	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
DraI	TTTAAA	1 cut(s)	2730
DrdI	GACNNNNNNGTC	1 cut(s)	2741
DseDI	GACNNNNNNGTC	1 cut(s)	2741
EaeI	YGGCCR	1 cut(s)	184
EagI	CGGCCG	1 cut(s)	184
Eam1104I	CTCTTC	3 cut(s)	42, 892, 2403
EarI	CTCTTC	3 cut(s)	42, 892, 2403
Ecl136II	GAGCTC	1 cut(s)	486
EclXI	CGGCCG	1 cut(s)	184
Eco130I	CCWWGG	4 cut(s)	31, 916, 954, 2370
Eco24I	GRGCYC	3 cut(s)	488, 557, 2398
Eco31I	GGTCTC	1 cut(s)	1606
Eco32I	GATATC	1 cut(s)	1443
Eco47I	GGWCC	2 cut(s)	679, 1723
Eco52I	CGGCCG	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	486
Eco57I	CTGAAG	6 cut(s)	414, 1634, 2084, 2106, 2822, 2971
Eco88I	CYCGRG	1 cut(s)	1004
EcoICRI	GAGCTC	1 cut(s)	486
EcoNI	CCTNNNNNAGG	2 cut(s)	298, 2134
EcoO109I	RGGNCCY	3 cut(s)	291, 553, 554
EcoRII	CCWGG	1 cut(s)	1017
EcoRV	GATATC	1 cut(s)	1443
EcoT14I	CCWWGG	4 cut(s)	31, 916, 954, 2370
EcoT22I	ATGCAT	2 cut(s)	1580, 2520
EcoT38I	GRGCYC	3 cut(s)	488, 557, 2398
ErhI	CCWWGG	4 cut(s)	31, 916, 954, 2370
Esp3I	CGTCTC	2 cut(s)	30, 2121
FalI	AAGNNNNNCTT	6 cut(s)	1710, 1742, 2382, 2414, 2969, 3001
FaqI	GGGAC	4 cut(s)	266, 950, 1995, 2907
FauI	CCCGC	3 cut(s)	430, 2181, 2537
FauNDI	CATATG	1 cut(s)	660
FbaI	TGATCA	1 cut(s)	355
FblI	GTMKAC	1 cut(s)	1489
FokI	GGATG	6 cut(s)	229, 593, 646, 2082, 2153, 2353
FriOI	GRGCYC	3 cut(s)	488, 557, 2398
FspAI	RTGCGCAY	1 cut(s)	1082
FspBI	CTAG	7 cut(s)	732, 917, 932, 1538, 1658, 2120, 2826
FspI	TGCGCA	1 cut(s)	1082
GsuI	CTGGAG	2 cut(s)	772, 2918
HaeII	RGCGCY	2 cut(s)	276, 2042
HaeIII	GGCC	3 cut(s)	186, 293, 555
HapII	CCGG	2 cut(s)	1885, 2614
HgaI	GACGC	3 cut(s)	270, 1326, 2132
HincII	GTYRAC	2 cut(s)	1386, 1504
HindII	GTYRAC	2 cut(s)	1386, 1504
HindIII	AAGCTT	4 cut(s)	1196, 1397, 2343, 2804
HpaII	CCGG	2 cut(s)	1885, 2614
HphI	GGTGA	3 cut(s)	19, 365, 557
Hpy166II	GTNNAC	5 cut(s)	1386, 1490, 1504, 1723, 2512
Hpy8I	GTNNAC	5 cut(s)	1386, 1490, 1504, 1723, 2512
Hpy99I	CGWCG	2 cut(s)	137, 286
HpyAV	CCTTC	7 cut(s)	61, 206, 314, 581, 2059, 2255, 2384
HpyCH4III	ACNGT	9 cut(s)	965, 1346, 1390, 1406, 1610, 1820, 2636, 2813, 3003
HpyCH4IV	ACGT	5 cut(s)	1294, 2114, 2683, 2736, 2956
HpyF3I	CTNAG	6 cut(s)	153, 200, 246, 1985, 2027, 2580
HpySE526I	ACGT	5 cut(s)	1294, 2114, 2683, 2736, 2956
KpnI	GGTACC	1 cut(s)	852
Ksp22I	TGATCA	1 cut(s)	355
Kzo9I	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
LguI	GCTCTTC	1 cut(s)	2403
LmnI	GCTCC	4 cut(s)	1471, 1623, 2374, 2458
LweI	GCATC	6 cut(s)	985, 1195, 1425, 1565, 1587, 2991
MaeI	CTAG	7 cut(s)	732, 917, 932, 1538, 1658, 2120, 2826
MaeII	ACGT	5 cut(s)	1294, 2114, 2683, 2736, 2956
MaeIII	GTNAC	6 cut(s)	188, 1130, 1451, 1989, 2337, 2616
MalI	GATC	8 cut(s)	74, 357, 639, 727, 792, 986, 1512, 1950
MboI	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
MfeI	CAATTG	4 cut(s)	1480, 2098, 2598, 2779
MflI	RGATCY	2 cut(s)	637, 1510
MhlI	GDGCHC	7 cut(s)	247, 488, 557, 739, 1620, 2028, 2398
MlyI	GAGTC	9 cut(s)	266, 1038, 1256, 1373, 2192, 2220, 2318, 2357, 2896
Mph1103I	ATGCAT	2 cut(s)	1580, 2520
MslI	CAYNNNNRTG	2 cut(s)	1407, 1699
MspA1I	CMGCKG	2 cut(s)	1223, 2176
MspCI	CTTAAG	2 cut(s)	1394, 2324
MspI	CCGG	2 cut(s)	1885, 2614
MspR9I	CCNGG	2 cut(s)	1019, 1886
MunI	CAATTG	4 cut(s)	1480, 2098, 2598, 2779
MvaI	CCWGG	1 cut(s)	1019
MvnI	CGCG	2 cut(s)	183, 234
NciI	CCSGG	1 cut(s)	1886
NdeI	CATATG	1 cut(s)	660
NdeII	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
NlaIV	GGNNCC	8 cut(s)	305, 555, 556, 604, 850, 2376, 2434, 2595
NmeAIII	GCCGAG	3 cut(s)	289, 314, 722
NmuCI	GTSAC	2 cut(s)	188, 1989
NsbI	TGCGCA	1 cut(s)	1082
NsiI	ATGCAT	2 cut(s)	1580, 2520
NspI	RCATGY	6 cut(s)	1459, 2518, 2572, 2698, 2896, 2967
OliI	CACNNNNGTG	1 cut(s)	1407
PaeI	GCATGC	2 cut(s)	2896, 2967
PagI	TCATGA	4 cut(s)	75, 400, 739, 873
PciI	ACATGT	1 cut(s)	2694
PciSI	GCTCTTC	1 cut(s)	2403
PfeI	GAWTC	6 cut(s)	362, 563, 772, 898, 1567, 1842
PflFI	GACNNNGTC	1 cut(s)	1047
PflMI	CCANNNNNTGG	2 cut(s)	955, 2416
PfoI	TCCNGGA	1 cut(s)	1017
PinAI	ACCGGT	1 cut(s)	2613
PleI	GAGTC	9 cut(s)	265, 1038, 1255, 1372, 2191, 2220, 2317, 2357, 2896
PpsI	GAGTC	9 cut(s)	265, 1038, 1255, 1372, 2191, 2220, 2317, 2357, 2896
Ppu21I	YACGTR	2 cut(s)	1295, 2957
PscI	ACATGT	1 cut(s)	2694
Psp124BI	GAGCTC	1 cut(s)	488
Psp6I	CCWGG	1 cut(s)	1017
PspGI	CCWGG	1 cut(s)	1017
PspN4I	GGNNCC	8 cut(s)	305, 555, 556, 604, 850, 2376, 2434, 2595
PspOMI	GGGCCC	1 cut(s)	553
PspPI	GGNCC	5 cut(s)	291, 553, 554, 679, 1723
PstI	CTGCAG	4 cut(s)	343, 460, 1850, 2625
PstNI	CAGNNNCTG	1 cut(s)	1208
PsuI	RGATCY	2 cut(s)	637, 1510
PsyI	GACNNNGTC	1 cut(s)	1047
RsaI	GTAC	4 cut(s)	850, 1542, 2354, 2785
RsaNI	GTAC	4 cut(s)	849, 1541, 2353, 2784
RseI	CAYNNNNRTG	2 cut(s)	1407, 1699
SacI	GAGCTC	1 cut(s)	488
SapI	GCTCTTC	1 cut(s)	2403
Sau3AI	GATC	8 cut(s)	72, 355, 637, 725, 790, 984, 1510, 1948
Sau96I	GGNCC	5 cut(s)	291, 553, 554, 679, 1723
ScaI	AGTACT	1 cut(s)	2354
SchI	GAGTC	9 cut(s)	266, 1038, 1256, 1373, 2192, 2220, 2318, 2357, 2896
ScrFI	CCNGG	2 cut(s)	1019, 1886
SduI	GDGCHC	7 cut(s)	247, 488, 557, 739, 1620, 2028, 2398
SfaNI	GCATC	6 cut(s)	985, 1195, 1425, 1565, 1587, 2991
SfcI	CTRYAG	6 cut(s)	339, 456, 469, 1846, 1857, 2621
SinI	GGWCC	2 cut(s)	679, 1723
SmiMI	CAYNNNNRTG	2 cut(s)	1407, 1699
SmlI	CTYRAG	6 cut(s)	902, 1361, 1394, 1460, 2057, 2324
SmoI	CTYRAG	6 cut(s)	902, 1361, 1394, 1460, 2057, 2324
SpeI	ACTAGT	2 cut(s)	1537, 2825
SphI	GCATGC	2 cut(s)	2896, 2967
SspI	AATATT	3 cut(s)	841, 1531, 2653
SspMI	CTAG	7 cut(s)	732, 917, 932, 1538, 1658, 2120, 2826
SstI	GAGCTC	1 cut(s)	488
StyD4I	CCNGG	2 cut(s)	1017, 1884
StyI	CCWWGG	4 cut(s)	31, 916, 954, 2370
TaaI	ACNGT	9 cut(s)	965, 1346, 1390, 1406, 1610, 1820, 2636, 2813, 3003
TaiI	ACGT	5 cut(s)	1297, 2117, 2686, 2739, 2959
TaqI	TCGA	7 cut(s)	775, 983, 1107, 1812, 1840, 2034, 2307
TatI	WGTACW	3 cut(s)	1540, 2352, 2783
TauI	GCSGC	3 cut(s)	186, 237, 1226
TfiI	GAWTC	6 cut(s)	362, 563, 772, 898, 1567, 1842
TscAI	CASTG	5 cut(s)	254, 725, 1701, 2545, 2871
TseFI	GTSAC	2 cut(s)	188, 1989
Tsp45I	GTSAC	2 cut(s)	188, 1989
TspGWI	ACGGA	1 cut(s)	2445
TspRI	CASTG	5 cut(s)	254, 725, 1701, 2545, 2871
Tth111I	GACNNNGTC	1 cut(s)	1047
Van91I	CCANNNNNTGG	2 cut(s)	955, 2416
Vha464I	CTTAAG	2 cut(s)	1394, 2324
VpaK11BI	GGWCC	2 cut(s)	679, 1723
XagI	CCTNNNNNAGG	2 cut(s)	298, 2134
XapI	RAATTY	7 cut(s)	442, 763, 1642, 1750, 1996, 2251, 2725
XbaI	TCTAGA	1 cut(s)	2119
XceI	RCATGY	6 cut(s)	1459, 2518, 2572, 2698, 2896, 2967
XmaJI	CCTAGG	1 cut(s)	916
XmiI	GTMKAC	1 cut(s)	1489
XspI	CTAG	7 cut(s)	732, 917, 932, 1538, 1658, 2120, 2826
ZrmI	AGTACT	1 cut(s)	2354
Zsp2I	ATGCAT	2 cut(s)	1580, 2520

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.