Rroxscaffold_7G00157300

F-box LRR-repeat protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
1102965 .. 1109861
6897 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00157300.1

Sequence Viewer

Length: 2859 bp
ATGAAGATTTGGTGCTGCCTGTGCTTCACCGTAGAAGACGAACCGCAAGAGGAGGAGCGTAAGGAGGCCATGAAGGAGGACGATTTCGTAAATAAGGTGAATTCCGAGGGGGTTATGGCAAATGAGGTGGACGAGGAGGAGGAGGAGGAGGAGGCTGCCGAGGAGGTGGTGCCGCGATTGGAGCTCGCTGCCAGTGACGGCGGTGGCCGTGACCGTGACGACCACCTGAGAATGTTTGAAGGGATGGTCCAGGCAATGCGGAGTGGGACCCACTGGGACGAGTCGCTGTGTGTTGGCGCTCTCGACACGTTGAGGGCCGCGATTAGGTCTCCTCGGTGGTCGGAGGGCGAGACTAGCTCGGCTCCTGCGGCGGCTGCCGCCGAGGAGGAGGACGGCGATCACGATTCACATCATAAGCGAGCTAAAGTTCACTCCTTTTCTCATGATTTCCATTATGCAATGGCAATGTCTTCAGGTGCTGGAAATTCTAGTTCCTCTGACAGAGACTACAGCAGAACTCAAGGCTCTAATGTTCTGTATAAGAGCGAAACTTTTTTCCATAGTTTTACACCGAACATTGGTGGTGAGGAGAATCCCTATGAATCTGGCAGTAGGAAAGATGATGAAAGACATAAGGGTGACACTTCAACAACTGAAGATTTTGAAGTTCGTATGGATCTTACAGATGATCTATTACACATGGTTTTCTCTTTCTTGGACCACATCAATCTTTGCCGAGCTGCAATAGTCTGCAGGCAATGGCGAGCTGCTAGTGCTCATGAAGATTTCTGGAGGTGCTTGAATTTTGAGAATCGGAACATATCTGTAGAGCAATTTCAGGATATATGTTGGCGGTATCCGAATGCCACAGAATTGAATATTTCTGGTACCCCTGCTATTCCGTTGCTTGTGATGACAGCGATCACATCATTGAGGAATCTTGAAGTTTTAACTCTAGGCAAAGGGACAATAGGAGATCTTTTTTTCCATTCCTTGGCAGATTGTCTGATGTTGAAAAGTTTGATAGTCAATGATGCTACTCTTGGTACTGGTATTCAGGAGATACCTATAAACCACGATAGACTGCGTCATCTTGAACTGACAAAATGTCGTGTTATGCGCATATCTATCAGGTGTCCACAACTGGAGACACTGTCAATGAAGCGCAGTAATATGGCCCAGGCTGTTCTTAATAGCCCTCTTTTGCGCGATCTTGATTTAGGCTCTTGCCACAAGCTTTCCGATGCTGCAATTCGTTCAGCAGCAACTTCTTGTCCCCAATTGGAGTCACTAGATATGTCAAATTGTTCATGTGTTAGTGATGAAACACTACGTGAGATAGCTCTTACTTGTGCAAATCTCCATGTTCTCAATGCATCGTACTGTCCAAATGTATCCCTAGAGTCTGTAAGACTGCCAATGTTGACAGTTCTCAAGCTACACAGTTGTGAGGGCATCACTTCCGCTTCCATGGTTGCAATATCAAATAGTTACATGCTGGAGAAACTATCATTGCAGAAGCAAGAGAGCTTAACTACGTTGGCACTGCAATGCCCAAGTTTACAAGAAGTGGATCTCACAGATTGTGAATCTCTAACAAATTCTATATGCAATGTTTTCAGTGATGGTGGTGGGTGCCCTATGCTTAAAACTTTAGTTCTCGAAAACTGTGAGAGCTTAACAGCAGTTCGATTCTGCAGCACTTCTTTAGTCAGTCTTTCACTTGTTGGTTGTCGGGGAATCACCTCTCTTGAACTGACATGCCCGTATCTTGAACAAGTTTCTTTGGATGGTTGTGATCATCTTGAAAGTGCAGCATTTTTTCCGGTTGGTCTTAGGTCACTAAATTTGGGAATATGTCCCAAACTGAACGCCCTCAGCATCGACGCGCCAAACATGGTGCTGCTTGAGTTGAAGGGATGTGGTGTATTGTCTGAAGCATCGATTAATTGTCCACTCTTAACGTCTATGGACGCTTCCTTTTGCAGCCAGCTTAGGGACGATTGCTTGTCTGCAACTGCCGCTTCATGTCCCCTGATTGAGTCTTTAATTCTAATGTCATGCCCCTCAGTTGGTTCTGATGGACTCTATTCTCTGCGCTGGCTTCCAAATTTGATTGTGCTTGATTTGTCATACACTTTCTTAATGAGCTTGAAGCCAGTATTCGAGTCTTGCATTAAGCTAAAGGTTTTAAAATTACAAGCATGCAAGTATCTATCTGATTCATCCCTGGAGCCTCTTTACAAGGAAGGGGCGCTTCCAGCTCTCCAGGAATTGGATTTGTCGTATGGAACCCTCTGTCAGTCTGCTATTGAAGAGCTTCTTTCTTTCTGTACACAGTTAACTCATGTGAGCTTGAATGGCTGTGTGAACATGCATGATCTGAACTGGGGTAGCAGTGGTGGGCAGCCTCTTGTAAAGTCTAGTATCTCTGTCCCATCACTTGAATATGTCAATGAGCCAGTGGAGTATGGAAACCGGCTACTGCAGAATCTCAACTGTGTGGGTTGTCCAAATATCAGGAAAGTTCACATTCCAGTAGCAGCAGGTTGTTTCCATTTGACTTCATTGAACCTTTCTCTCTCTGCAAATTTGAAGGATGTAGAAGTTGCTTGTTTCAACCTATGCTTTCTTAACCTGAGCAATTGTTATTCTTTGGAAGTTCTGAAGCTTGACTGTCCAAAATTGACTAGTCTCTTTCTTCAGTCTTGCAACATGAACGAAGCAGCAGTGGAAGCTGCAATATCAAAATGTAGCATGCTGGAGACTCTTGATATATGTCCATTAAGCATGGGAAGATTACGTGCTGCGTGCCCAAGTTTGAAGCGCATCTTTAGCAGCCTGTCACCACAGTCATGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

952

Amino Acids

104.56

Weight (kDa)

4.87

Isoelectric Point (pI)

51.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 226 - 265 3.8e-09 F-box domain
F-box-like PF12937 229 - 269 8.5e-10 F-box-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1121
Acc36I ACCTGC 1 cut(s) 2537
Acc65I GGTACC 1 cut(s) 887
AccB1I GGYRCC 3 cut(s) 169, 887, 1635
AccB7I CCANNNNNTGG 2 cut(s) 994, 2275
AccII CGCG 4 cut(s) 175, 320, 1209, 1889
AclWI GGATC 2 cut(s) 684, 1581
AcoI YGGCCR 1 cut(s) 205
AcsI RAATTY 7 cut(s) 100, 484, 802, 1600, 1846, 2110, 2590
AcuI CTGAAG 5 cut(s) 456, 675, 1956, 2687, 2687
AdeI CACNNNGTG 1 cut(s) 1334
AfaI GTAC 4 cut(s) 889, 1048, 1382, 2335
AfiI CCNNNNNNNGG 6 cut(s) 324, 578, 994, 1996, 2072, 2275
AflIII ACRYGT 1 cut(s) 306
AhdI GACNNNNNGTC 1 cut(s) 1107
AhlI ACTAGT 1 cut(s) 2690
AjnI CCWGG 4 cut(s) 249, 1179, 2229, 2268
AleI CACNNNNGTG 1 cut(s) 1446
Alw21I GWGCWC 2 cut(s) 186, 778
Alw26I GTCTC 6 cut(s) 333, 344, 498, 1142, 2699, 2759
AlwI GGATC 2 cut(s) 684, 1581
AlwNI CAGNNNCTG 1 cut(s) 479
AoxI GGCC 4 cut(s) 66, 205, 315, 1176
ApoI RAATTY 7 cut(s) 100, 484, 802, 1600, 1846, 2110, 2590
AseI ATTAAT 1 cut(s) 1947
Asp700I GAANNNNTTC 1 cut(s) 2319
Asp718I GGTACC 1 cut(s) 887
AspLEI GCGC 8 cut(s) 299, 1122, 1167, 1209, 1891, 2100, 2257, 2829
AspS9I GGNCC 5 cut(s) 247, 267, 315, 718, 1177
AsuHPI GGTGA 6 cut(s) 19, 109, 596, 650, 1735, 2838
AvaII GGWCC 3 cut(s) 247, 267, 718
BaeGI GKGCMC 2 cut(s) 1640, 2816
BanI GGYRCC 3 cut(s) 169, 887, 1635
BanII GRGCYC 1 cut(s) 186
BbsI GAAGAC 2 cut(s) 42, 462
Bbv12I GWGCWC 2 cut(s) 186, 778
BbvCI CCTCAGC 1 cut(s) 1877
BccI CCATC 5 cut(s) 238, 1619, 1784, 2075, 2446
BceAI ACGGC 3 cut(s) 192, 214, 409
BciT130I CCWGG 4 cut(s) 251, 1181, 2231, 2270
BciVI GTATCC 2 cut(s) 867, 1405
BclI TGATCA 1 cut(s) 1798
BcoDI GTCTC 6 cut(s) 333, 344, 498, 1142, 2699, 2759
BcuI ACTAGT 1 cut(s) 2690
BfaI CTAG 8 cut(s) 354, 489, 771, 956, 1292, 1400, 2424, 2691
BfmI CTRYAG 5 cut(s) 508, 751, 825, 1696, 2486
BfoI RGCGCY 2 cut(s) 300, 2258
BfuAI ACCTGC 1 cut(s) 2537
BfuI GTATCC 2 cut(s) 867, 1405
BglII AGATCT 1 cut(s) 976
Bme1390I CCNGG 4 cut(s) 251, 1181, 2231, 2270
Bme18I GGWCC 3 cut(s) 247, 267, 718
BmeRI GACNNNNNGTC 1 cut(s) 1107
BmgT120I GGNCC 5 cut(s) 247, 267, 315, 718, 1177
BmiI GGNNCC 8 cut(s) 171, 268, 269, 363, 889, 1637, 2235, 2293
BmrFI CCNGG 4 cut(s) 251, 1181, 2231, 2270
BmrI ACTGGG 2 cut(s) 283, 2398
BmsI GCATC 7 cut(s) 1024, 1234, 1385, 1464, 1890, 1949, 2838
BmuI ACTGGG 2 cut(s) 283, 2398
BpiI GAAGAC 2 cut(s) 42, 462
BplI GAGNNNNNCTC 2 cut(s) 341, 373
BpmI CTGGAG 6 cut(s) 811, 1166, 1520, 2252, 2252, 2783
Bpu10I CCTNAGC 3 cut(s) 1877, 1994, 2639
BpuEI CTTGAG 3 cut(s) 504, 1418, 1928
Bsa29I ATCGAT 1 cut(s) 1943
BsaAI YACGTR 2 cut(s) 1334, 2804
BsaBI GATNNNNATC 1 cut(s) 408
BsaI GGTCTC 1 cut(s) 333
BsaJI CCNNGG 8 cut(s) 105, 159, 332, 381, 993, 1179, 1470, 2229
BsaWI WCCGGW 1 cut(s) 1825
BsaXI ACNNNNNCTCC 2 cut(s) 1139, 1169
Bsc4I CCNNNNNNNGG 6 cut(s) 324, 578, 994, 1996, 2072, 2275
Bse118I RCCGGY 1 cut(s) 2478
Bse1I ACTGG 8 cut(s) 192, 278, 1054, 1149, 2159, 2393, 2462, 2537
Bse3DI GCAATG 7 cut(s) 261, 465, 471, 764, 1511, 1556, 1618
Bse8I GATNNNNATC 1 cut(s) 408
BseBI CCWGG 4 cut(s) 251, 1181, 2231, 2270
BseCI ATCGAT 1 cut(s) 1943
BseDI CCNNGG 8 cut(s) 105, 159, 332, 381, 993, 1179, 1470, 2229
BseGI GGATG 5 cut(s) 249, 1795, 1925, 2225, 2605
BseJI GATNNNNATC 1 cut(s) 408
BseLI CCNNNNNNNGG 6 cut(s) 324, 578, 994, 1996, 2072, 2275
BseMI GCAATG 7 cut(s) 261, 465, 471, 764, 1511, 1556, 1618
BseMII CTCAG 4 cut(s) 218, 1891, 2082, 2630
BseNI ACTGG 8 cut(s) 192, 278, 1054, 1149, 2159, 2393, 2462, 2537
BseSI GKGCMC 2 cut(s) 1640, 2816
BsgI GTGCAG 1 cut(s) 1833
Bsh1236I CGCG 4 cut(s) 175, 320, 1209, 1889
BshFI GGCC 4 cut(s) 68, 207, 317, 1178
BshNI GGYRCC 3 cut(s) 169, 887, 1635
BshVI ATCGAT 1 cut(s) 1943
BsiHKAI GWGCWC 2 cut(s) 186, 778
BsiSI CCGG 2 cut(s) 1826, 2479
BslFI GGGAC 8 cut(s) 280, 290, 979, 1260, 1845, 2012, 2016, 2420
BslI CCNNNNNNNGG 6 cut(s) 324, 578, 994, 1996, 2072, 2275
BsmAI GTCTC 6 cut(s) 333, 344, 498, 1142, 2699, 2759
BsmFI GGGAC 8 cut(s) 280, 290, 979, 1260, 1845, 2012, 2016, 2420
BsmI GAATGC 1 cut(s) 868
BsnI GGCC 4 cut(s) 68, 207, 317, 1178
Bso31I GGTCTC 1 cut(s) 333
Bsp1286I GDGCHC 4 cut(s) 186, 778, 1640, 2816
Bsp1407I TGTACA 1 cut(s) 2333
Bsp143I GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
Bsp19I CCATGG 1 cut(s) 1470
BspANI GGCC 4 cut(s) 68, 207, 317, 1178
BspCNI CTCAG 4 cut(s) 219, 1890, 2081, 2631
BspDI ATCGAT 1 cut(s) 1943
BspFNI CGCG 4 cut(s) 175, 320, 1209, 1889
BspHI TCATGA 3 cut(s) 442, 778, 2855
BspLI GGNNCC 8 cut(s) 171, 268, 269, 363, 889, 1637, 2235, 2293
BspMAI CTGCAG 3 cut(s) 755, 1700, 2490
BspMI ACCTGC 1 cut(s) 2537
BspPI GGATC 2 cut(s) 684, 1581
BspQI GCTCTTC 1 cut(s) 2310
BspT107I GGYRCC 3 cut(s) 169, 887, 1635
BspTNI GGTCTC 1 cut(s) 333
BsrDI GCAATG 7 cut(s) 261, 465, 471, 764, 1511, 1556, 1618
BsrFI RCCGGY 1 cut(s) 2478
BsrGI TGTACA 1 cut(s) 2333
BsrI ACTGG 8 cut(s) 192, 278, 1054, 1149, 2159, 2393, 2462, 2537
BssAI RCCGGY 1 cut(s) 2478
BssECI CCNNGG 8 cut(s) 105, 159, 332, 381, 993, 1179, 1470, 2229
BssMI GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
BssT1I CCWWGG 2 cut(s) 993, 1470
Bst2UI CCWGG 4 cut(s) 251, 1181, 2231, 2270
Bst6I CTCTTC 1 cut(s) 2310
BstAUI TGTACA 1 cut(s) 2333
BstBAI YACGTR 2 cut(s) 1334, 2804
BstC8I GCNNGC 9 cut(s) 186, 420, 755, 765, 1991, 2102, 2206, 2759, 2812
BstDEI CTNAG 6 cut(s) 227, 1835, 1877, 1994, 2068, 2639
BstDSI CCRYGG 1 cut(s) 1470
BstF5I GGATG 5 cut(s) 249, 1795, 1925, 2225, 2605
BstFNI CGCG 4 cut(s) 175, 320, 1209, 1889
BstH2I RGCGCY 2 cut(s) 300, 2258
BstHHI GCGC 8 cut(s) 299, 1122, 1167, 1209, 1891, 2100, 2257, 2829
BstKTI GATC 9 cut(s) 400, 679, 691, 924, 979, 1213, 1576, 1801, 2383
BstMAI GTCTC 6 cut(s) 333, 344, 498, 1142, 2699, 2759
BstMBI GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
BstNI CCWGG 4 cut(s) 251, 1181, 2231, 2270
BstNSI RCATGY 5 cut(s) 1498, 1764, 2208, 2377, 2761
BstSCI CCNGG 4 cut(s) 249, 1179, 2229, 2268
BstSFI CTRYAG 5 cut(s) 508, 751, 825, 1696, 2486
BstSLI GKGCMC 2 cut(s) 1640, 2816
BstUI CGCG 4 cut(s) 175, 320, 1209, 1889
BstV2I GAAGAC 2 cut(s) 42, 462
BstX2I RGATCY 3 cut(s) 676, 976, 1573
BstYI RGATCY 3 cut(s) 676, 976, 1573
Bsu15I ATCGAT 1 cut(s) 1943
BsuI GTATCC 2 cut(s) 867, 1405
BsuRI GGCC 4 cut(s) 68, 207, 317, 1178
BsuTUI ATCGAT 1 cut(s) 1943
BtgI CCRYGG 1 cut(s) 1470
BtsCI GGATG 5 cut(s) 249, 1795, 1925, 2225, 2605
BtsI GCAGTG 3 cut(s) 1544, 2404, 2736
BtsIMutI CAGTG 8 cut(s) 199, 271, 1151, 1544, 1627, 2404, 2469, 2736
BveI ACCTGC 1 cut(s) 2537
Cac8I GCNNGC 9 cut(s) 186, 420, 755, 765, 1991, 2102, 2206, 2759, 2812
CaiI CAGNNNCTG 1 cut(s) 479
CciI TCATGA 3 cut(s) 442, 778, 2855
CfoI GCGC 8 cut(s) 299, 1122, 1167, 1209, 1891, 2100, 2257, 2829
Cfr10I RCCGGY 1 cut(s) 2478
Cfr13I GGNCC 5 cut(s) 247, 267, 315, 718, 1177
ClaI ATCGAT 1 cut(s) 1943
CseI GACGC 3 cut(s) 1076, 1895, 1982
Csp6I GTAC 4 cut(s) 888, 1047, 1381, 2334
CspCI CAANNNNNGTGG 2 cut(s) 108, 143
CviQI GTAC 4 cut(s) 888, 1047, 1381, 2334
DdeI CTNAG 6 cut(s) 227, 1835, 1877, 1994, 2068, 2639
DpnI GATC 9 cut(s) 399, 678, 690, 923, 978, 1212, 1575, 1800, 2382
DpnII GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
DraI TTTAAA 1 cut(s) 2193
DraIII CACNNNGTG 1 cut(s) 1334
DriI GACNNNNNGTC 1 cut(s) 1107
EaeI YGGCCR 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 2310
Eam1105I GACNNNNNGTC 1 cut(s) 1107
EarI CTCTTC 1 cut(s) 2310
Ecl136II GAGCTC 1 cut(s) 184
Eco130I CCWWGG 2 cut(s) 993, 1470
Eco24I GRGCYC 1 cut(s) 186
Eco31I GGTCTC 1 cut(s) 333
Eco47I GGWCC 3 cut(s) 247, 267, 718
Eco53kI GAGCTC 1 cut(s) 184
Eco57I CTGAAG 5 cut(s) 456, 675, 1956, 2687, 2687
EcoICRI GAGCTC 1 cut(s) 184
EcoO109I RGGNCCY 1 cut(s) 267
EcoRI GAATTC 1 cut(s) 100
EcoRII CCWGG 4 cut(s) 249, 1179, 2229, 2268
EcoT14I CCWWGG 2 cut(s) 993, 1470
EcoT22I ATGCAT 2 cut(s) 1378, 2379
EcoT38I GRGCYC 1 cut(s) 186
ErhI CCWWGG 2 cut(s) 993, 1470
FalI AAGNNNNNCTT 6 cut(s) 2241, 2273, 2307, 2339, 2816, 2848
FaqI GGGAC 8 cut(s) 280, 290, 979, 1260, 1845, 2012, 2016, 2420
FbaI TGATCA 1 cut(s) 1798
FokI GGATG 5 cut(s) 256, 1802, 1932, 2212, 2612
FriOI GRGCYC 1 cut(s) 186
FspAI RTGCGCAY 1 cut(s) 1121
FspBI CTAG 8 cut(s) 354, 489, 771, 956, 1292, 1400, 2424, 2691
FspI TGCGCA 1 cut(s) 1121
GlaI GCGC 8 cut(s) 298, 1121, 1166, 1208, 1890, 2099, 2256, 2828
GsuI CTGGAG 6 cut(s) 811, 1166, 1520, 2252, 2252, 2783
HaeII RGCGCY 2 cut(s) 300, 2258
HaeIII GGCC 4 cut(s) 68, 207, 317, 1178
HapII CCGG 2 cut(s) 1826, 2479
HgaI GACGC 3 cut(s) 1076, 1895, 1982
HhaI GCGC 8 cut(s) 299, 1122, 1167, 1209, 1891, 2100, 2257, 2829
Hin6I GCGC 8 cut(s) 297, 1120, 1165, 1207, 1889, 2098, 2255, 2827
HinP1I GCGC 8 cut(s) 297, 1120, 1165, 1207, 1889, 2098, 2255, 2827
HincII GTYRAC 2 cut(s) 1425, 2343
HindII GTYRAC 2 cut(s) 1425, 2343
HindIII AAGCTT 2 cut(s) 1235, 2669
HpaI GTTAAC 1 cut(s) 2343
HpaII CCGG 2 cut(s) 1826, 2479
HphI GGTGA 6 cut(s) 19, 109, 596, 650, 1735, 2838
Hpy99I CGWCG 1 cut(s) 1889
HpyAV CCTTC 5 cut(s) 67, 233, 1909, 2243, 2590
HpyCH4IV ACGT 5 cut(s) 308, 1333, 1538, 1964, 2803
HpyF3I CTNAG 6 cut(s) 227, 1835, 1877, 1994, 2068, 2639
HpySE526I ACGT 5 cut(s) 308, 1333, 1538, 1964, 2803
HspAI GCGC 8 cut(s) 297, 1120, 1165, 1207, 1889, 2098, 2255, 2827
KflI GGGWCCC 1 cut(s) 267
KpnI GGTACC 1 cut(s) 891
Ksp22I TGATCA 1 cut(s) 1798
KspAI GTTAAC 1 cut(s) 2343
Kzo9I GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
LguI GCTCTTC 1 cut(s) 2310
LmnI GCTCC 4 cut(s) 55, 181, 367, 2233
LweI GCATC 7 cut(s) 1024, 1234, 1385, 1464, 1890, 1949, 2838
MaeI CTAG 8 cut(s) 354, 489, 771, 956, 1292, 1400, 2424, 2691
MaeII ACGT 5 cut(s) 308, 1333, 1538, 1964, 2803
MaeIII GTNAC 8 cut(s) 194, 209, 215, 638, 1287, 1490, 1839, 2844
MalI GATC 9 cut(s) 399, 678, 690, 923, 978, 1212, 1575, 1800, 2382
MboI GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
MboII GAAGA 8 cut(s) 16, 47, 462, 668, 794, 2327, 2693, 2808
MfeI CAATTG 2 cut(s) 1280, 2644
MflI RGATCY 3 cut(s) 676, 976, 1573
MhlI GDGCHC 4 cut(s) 186, 778, 1640, 2816
MlyI GAGTC 7 cut(s) 290, 1295, 1412, 2051, 2079, 2177, 2761
MmeI TCCRAC 1 cut(s) 321
Mph1103I ATGCAT 2 cut(s) 1378, 2379
MroXI GAANNNNTTC 1 cut(s) 2319
MslI CAYNNNNRTG 4 cut(s) 636, 1446, 1549, 2854
MspI CCGG 2 cut(s) 1826, 2479
MspR9I CCNGG 4 cut(s) 251, 1181, 2231, 2270
MunI CAATTG 2 cut(s) 1280, 2644
Mva1269I GAATGC 1 cut(s) 868
MvaI CCWGG 4 cut(s) 251, 1181, 2231, 2270
MvnI CGCG 4 cut(s) 175, 320, 1209, 1889
NcoI CCATGG 1 cut(s) 1470
NdeII GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
NlaIV GGNNCC 8 cut(s) 171, 268, 269, 363, 889, 1637, 2235, 2293
NmeAIII GCCGAG 4 cut(s) 184, 338, 406, 761
NmuCI GTSAC 7 cut(s) 194, 209, 215, 638, 1287, 1839, 2844
NsbI TGCGCA 1 cut(s) 1121
NsiI ATGCAT 2 cut(s) 1378, 2379
NspI RCATGY 5 cut(s) 1498, 1764, 2208, 2377, 2761
OliI CACNNNNGTG 1 cut(s) 1446
PaeI GCATGC 2 cut(s) 2208, 2761
PagI TCATGA 3 cut(s) 442, 778, 2855
PciSI GCTCTTC 1 cut(s) 2310
PcsI WCGNNNNNNNCGW 1 cut(s) 399
PctI GAATGC 1 cut(s) 868
PdmI GAANNNNTTC 1 cut(s) 2319
PflFI GACNNNGTC 2 cut(s) 1086, 1153
PflMI CCANNNNNTGG 2 cut(s) 994, 2275
PfoI TCCNGGA 1 cut(s) 2268
PleI GAGTC 7 cut(s) 289, 1294, 1411, 2050, 2079, 2176, 2761
PpsI GAGTC 7 cut(s) 289, 1294, 1411, 2050, 2079, 2176, 2761
Ppu21I YACGTR 2 cut(s) 1334, 2804
PpuMI RGGWCCY 1 cut(s) 267
PshBI ATTAAT 1 cut(s) 1947
Psp124BI GAGCTC 1 cut(s) 186
Psp5II RGGWCCY 1 cut(s) 267
Psp6I CCWGG 4 cut(s) 249, 1179, 2229, 2268
PspGI CCWGG 4 cut(s) 249, 1179, 2229, 2268
PspN4I GGNNCC 8 cut(s) 171, 268, 269, 363, 889, 1637, 2235, 2293
PspPI GGNCC 5 cut(s) 247, 267, 315, 718, 1177
PspPPI RGGWCCY 1 cut(s) 267
PstI CTGCAG 3 cut(s) 755, 1700, 2490
PstNI CAGNNNCTG 1 cut(s) 479
PsuI RGATCY 3 cut(s) 676, 976, 1573
PsyI GACNNNGTC 2 cut(s) 1086, 1153
RsaI GTAC 4 cut(s) 889, 1048, 1382, 2335
RsaNI GTAC 4 cut(s) 888, 1047, 1381, 2334
RseI CAYNNNNRTG 4 cut(s) 636, 1446, 1549, 2854
SacI GAGCTC 1 cut(s) 186
SapI GCTCTTC 1 cut(s) 2310
Sau3AI GATC 9 cut(s) 397, 676, 688, 921, 976, 1210, 1573, 1798, 2380
Sau96I GGNCC 5 cut(s) 247, 267, 315, 718, 1177
SchI GAGTC 7 cut(s) 290, 1295, 1412, 2051, 2079, 2177, 2761
ScrFI CCNGG 4 cut(s) 251, 1181, 2231, 2270
SduI GDGCHC 4 cut(s) 186, 778, 1640, 2816
SfaNI GCATC 7 cut(s) 1024, 1234, 1385, 1464, 1890, 1949, 2838
SfcI CTRYAG 5 cut(s) 508, 751, 825, 1696, 2486
SinI GGWCC 3 cut(s) 247, 267, 718
SmiMI CAYNNNNRTG 4 cut(s) 636, 1446, 1549, 2854
SmlI CTYRAG 3 cut(s) 519, 1433, 1907
SmoI CTYRAG 3 cut(s) 519, 1433, 1907
SpeI ACTAGT 1 cut(s) 2690
SphI GCATGC 2 cut(s) 2208, 2761
SspI AATATT 1 cut(s) 880
SspMI CTAG 8 cut(s) 354, 489, 771, 956, 1292, 1400, 2424, 2691
SstI GAGCTC 1 cut(s) 186
StyD4I CCNGG 4 cut(s) 249, 1179, 2229, 2268
StyI CCWWGG 2 cut(s) 993, 1470
TaiI ACGT 5 cut(s) 311, 1336, 1541, 1967, 2806
TaqI TCGA 6 cut(s) 303, 1662, 1690, 1884, 1943, 2166
TatI WGTACW 1 cut(s) 2333
TauI GCSGC 6 cut(s) 175, 320, 371, 374, 380, 2024
TscAI CASTG 8 cut(s) 199, 278, 1158, 1551, 1627, 2404, 2469, 2736
TseFI GTSAC 7 cut(s) 194, 209, 215, 638, 1287, 1839, 2844
Tsp45I GTSAC 7 cut(s) 194, 209, 215, 638, 1287, 1839, 2844
TspGWI ACGGA 1 cut(s) 891
TspRI CASTG 8 cut(s) 199, 278, 1158, 1551, 1627, 2404, 2469, 2736
Tth111I GACNNNGTC 2 cut(s) 1086, 1153
Van91I CCANNNNNTGG 2 cut(s) 994, 2275
VpaK11BI GGWCC 3 cut(s) 247, 267, 718
VspI ATTAAT 1 cut(s) 1947
XapI RAATTY 7 cut(s) 100, 484, 802, 1600, 1846, 2110, 2590
XceI RCATGY 5 cut(s) 1498, 1764, 2208, 2377, 2761
XmnI GAANNNNTTC 1 cut(s) 2319
XspI CTAG 8 cut(s) 354, 489, 771, 956, 1292, 1400, 2424, 2691
Zsp2I ATGCAT 2 cut(s) 1378, 2379
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.