Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0010312

Physical Location & Seq

Genomic Coordinates Reverse (-)

9581969 .. 9591309

Gene Structure 9341 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1108900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5964 bp

ATGTTCTCGATTGCAGCTATCAATGATACGGAGTCCAAAGGCAAATGGGAACCTTTAGCTCCCACCAAAGAAGCTCAGGCATGCCTCTCTCCTTCTCTCTCTCTCTACTTTTTCTGTTACATTTGGTCATGGCAGGAATTCCATCTTTCACAAACATATCATGAAGGACTTCACAAATTGCAAGTCAAGGAATACAAAAAGGCTGCTGAACTGTTAGAATCCGTCCTAAAAGATCCTCTTATAGAAAATGCGCAGGTGGATGGTAGTGTTAGTGATTGCCATCTATTGCAACTCAGATTTTTGGCTCTGAAGAACCTTGCCAATGTTTACCTTCAACAAGGTTCAGCATATTATGAGAATGCTTTACGATGTTATCTTCAAGCTGTAGAGATTGATACCAAAGATTCTGTTGTCTGGAACCAGCTGGGAACATTGTCATGCTCAATGGGTTCTCTCAGTATATCCCGTTGGGCATTTGAGCAAGGGCTTATATGTAGCCCTAATAATTGGAACTGCATGGAGAAATTATTGGAAGTTCTTATTGCTATTGGTGATGAGGTTGCATGCCTTTCTGTGGCTGAGTTAATTTTGAGGCATTGGCCATCACATTCTCGTGCTTTGCATGTCAAGAGAACCATTGAGGAGTCCGAGCCAGTTCCATTTGCTCCTAGAGGTATAGATAAGCTAGAACCTAAACATGTCCGTCTAAGATTCGTTGACAAGAGAAAAGCTACTGATGAAAATCTAGAGGAGGGCGCTGCATCCAAGAAGCTGAAGCAGACCATAGATCTGAACCTTGCAGAAGCTTCTTGGGCTGCTCTTGTTGATGCACTCTTGGATATCTTACTCCCGTTGAATGGGTGTCAGTCTGAGATGGGGGAAGCAAAATCATACCGATCTGGAGATGTCAGATTAATTTTGCATTTACCTCCTAGTTCAGAGAGTACCATAGGATTTGAGGAAAGGAAAGGGTTTAACTTATCCCCAATCAGTGGAAATGCTGTATTTGGTGATTGTACCACTGAACGAACAGGTGTTGTTATAGAAAAAGCAACAAATTTTCTAGACTTCCAACCACAGGAAAGGCGGAGTACTCGTCTTGAAAGGCTTAGAAGCCGTAAACCAGGGAAAGAAGATATTGAATTTGCTAATGGTAAGGATCAGGCCAAGGCTGTACTTCAATATCTAGAACCTTTTGTTGCTGGTAGATCAGGAAGCAAAGATTCTGGTCATAGTTCTGTTTCATGTCCTGATCAAGCTAATCCATGGGATACCGAATATGGTGACGTGTCCAGATTTATTAAAAAAACATCAAATAACTATGGTGCTTTCCATGTGGCTCATTTGCTTTTAGAGGATGCTGCCAGTAGAGGTCTTTTGTATCAGGATGCATTTGTTAAGTTCTTGGAGTTGGAAAGAATTACAAGGAATTGGGGGAAGGATAGGAGCCCTGAATGTTGTCTTTTTCTTGCTGAACTTTGTTATGATCTTGGGTCGATGTCTTCCGATGTTTCCAGGCTATCTGAATTCATGTCTGAGGCATCTTATCATCTTTGTAAAATTATCGAATCAGTAGCTGTGGAAGATGAATGTATTTTTGGGCTTAAGAGATTCTTTGGTACTGATGGAATATCCGTGAACACCTCTGTTTGTCAGGATGTATCATTAGGTGGTTCTTTAACAAGTAACAGTTCCTTCTGGGTTCGTTTTTTCTGGTTAAGTGGACGGTTGTCTGTTTTGGATGGCAACAAGGAAAAAGCCCACCAAGAATTCTGTATTTCATTGTCTCTTTTGGAAAAGAAGGAAAATACGAATGATTCCCAATGTGTGATCCGCCTTCCATATTGCAAGGTTGTTAAAGAGTTAACCATTTATAGAATTCTCCATGAAATTAACATTTTAAAGGTTGATTTCTTGATGAAGAAGACTTTGGGCGAGATGATTGAGAAGGAAATGTACATGGAGTGCATGTCCTTGCTTGTTCCACTTCTATTTGCAACAAAAAATGCTCCCCCTGATGCATTACCCTTGCGCTTAGCTGATAAAGGCAGAGAGGAAATTACTTCTGTTGAACTATCAGCACTAGACATTTTAATCAAAACATGTGAGAAGACAAAGCCTATGGATGTTGATGTTTATTTGAATTGCCATCAGCGGAAATTGCAAATCCTTATGGCAGCAGCAGGGATTGATGAATGCCTTGGTTCCTGTAAATCCTTACTATTGAAATCAGGATCAAACACTCGCTATGCTTCTGACGTAGACACCAAAGAAATTGCAAGCAAGCAGTGCTGGAATTTATTGGTTGCAGAGGAAGTGAAGGCTATTTCTCAATGTGTGTCACAAGTGAAGAACTTGATTGATCAATCTGGGGCTTCTGACACTATTCCGATGAGCAGCATAGGTGATATGCAATGCTTGCTCTTGTCAGTAATGTACAACGTTGCAAGCATATTCCTCTCTAAGAAGTCTGATCTAGCAAATACTGATCAAATTGAAAGAAATTGCTTCATTGAAGCTTCCATCGCATTCTGCAAGATTCAGCACCTCAACGCCATGATAAATGTTAAAACTCAAGTGGACTTAATTGTGACAATGCATGATTTACTCGCTGAGTATGGGCTTTGCTGTGCCGGGAAGGGTGGTGAAGTGGAGGAAGGAACTTTTCTTAAGTTCGCAATTAAGCATCTGTTGGCCTTGGATATGAAGTTTAAATCTAACGTTAACTCATCAAACCAGGAAACAACTCAATCTAGTGAGCAGCTTTGCCTAAATTGTCCTGCCAAAATGTCTCCCAAGGAATCAAAATCAGATACTGATTTGGAAATGGTGCACACTGGAATAGATGATACAAGTGCTGTAGGAAAGGATGCTTCTGAAGGGATACCTTCCAAAAGCACTTCACTTCAGAATTCCGTAGATAAAGACAGCATGGAATTGGAAGGTGGAAAGCCACATGTAGATGGGTCAGGTGGCAAGTTCAACAGATCCGAAGAAAGTGATCACTTAAATGAAGCTGGAGATGAGCTCATTGAAGATGAAAGGGAGGAACTTGAGTTAAAAATTGATTATGCATTGGATCAGTGTTTCTTCTGCTTATATGGTCTAAATATTAGATCTGATTCATCCTATGAAGATGAGTTAGTTGTGCACAAAAATACTAGCCCCGGTGATTACCAGACAAAGGAACAGTGTGCTGATGTTTTTCAGTACATACTCCCTTATGCAAAGGCTTCTTCTAGGACAGGATTAGTTAAAGTTCGACGAGTGCTCAGAGCCATACGCAAACATTTTCCACAACCACCAGAAGATGTTTTAGCTGGAAATGCAATAGAGAAGTTCTTAGATGATCCTCATTTGTGTGAAGATAAGCTCTCAGAAGAGGCTGGGTCTGATGGTTTTCTTGAAACCATAACAAAGATTATACTCCCGGATGCGAATGCGAGAAACCTTAAACAACAGAAGACATCACCAGTTGGGAGCTCGGAGCCGTATCTGGATGTCTATTGCAACTTGTATTATTTCCTTGCCCTGTCTGAGGAAATGAATGCTACTGATAAATGGCCTGGCTTTGTGCTTACCAAGGAAGGGGAAGAATTTGTACAACATAATGCAAAGCTCTTCAAATATGATTTACTTTACAATCCTCTACGTTTTGAAAGTTGGCAGAGACTCGGAAATATCTATGATGAGGAAGTAGACTTGTTGCTAAATGATGGCAGTAAGCACATCAATGTGGCAGGATGGAGGAAGAATGCAACTTTACCGCAAAGAGTTGAGACAAGTCGAAGGAGGAGCAGACGGTGTCTATTAATGAGTTTGGCTTTGGCAAAGACACCAGTTCAGCAGTCTGAGATACACGAGTTATTGGCATTGGTGTACTATGATAGCCTTCAAAGTGTGGTGCCATTTTATGATCAGCGAACTGTTCTACCTGTGAAGGATGCAGCATGGATGATGTTTTGTGAGAACTCAATGAGACATTTTAAAAAAGCTTTTGCTCATAAGCAAGATTGGTCACATGCTTACTATATCGGAAAGCTCTGTGAAAAGCTCAAATTCTCTTATGAGACATCGTTGTCATATTATGACAAAGCTATTGCTCTAAATCCATCAGCTGTAGATCCAGTCTACAGGATGCATGCTTCGCGCTTGAAGATACTTTGTGCATGCGGAAAACAAAATCTAGACGCTTTAAAGGTTCTTTCAACATATGCCTTTAGTCAATCAAGAAAGGATTCTATCATGATGATTTTAGGTAACATGGATTCTGAAAATTCATATTCGCCTAAGGATAAAAGCACACAAGAAAACACTGGGGAGAAGAATGAAGATTTACTCAAATTAGAGGTGTGGAACATGCTTTACAGCGATTGTCTTTCTGCCCTTGAAACTTGTGTTGAAGGGGAGCTTAAACATTTTCATAAAGCCAGATATATGCTTGCTCAAGGTCTGTTTAGAAAGGGGGAAAGTGGTGCATTGGAGAGGGCAAAGGACGATCTCTCCTTTTGCTTCAAATCATCTCGCTCATCATTTACAATAAATATGTGGGAGATTGATAGCACGGCCAAAAAAGGAAGGCGGAAAACTCCTGGTGTTTCTGGGAGTAAAAAGTCCCTTGAAGTTAACTTACCTGAAAGTTCTCGAAAATTTATTACTTGCATTCGGAAATATCTGTTGTTCTATTTGGAACTGTTGGAGAAGACTGGAGACATCTGTACTCTTGAACGTGCTTATATATCTCTTCGAGCTGATAAAAGGTTTTCACTATGCATTGAAGATCTTGTTCCAGTTGCACTAGGGAGGTACGTTAAGGCCCTGATTTCATCCATACGTCAAGCTAAGACTGTTGGCTCTGGTGCTACAAGTAATTCCGAGCACATATTGGAGAAAGTGTTTTGTTTGTTCATGGAGCAGGGGAACTTATGGCCAGAAATATGTGCTTTGCCTGAGATTAAAGTCACAGAGACGTCGGAAAGCAGTTTATATGGATTTCTTCATGAACATATAACAACATTGGAGAAAAATGGCAAGCTGGACACTCTTGAAGCCATAAATGAGAAGATACGGAAGAGGTTTAAGAATCCAAAATTGTCAAACAGTAACTGTGCAAAAGTTTGTAGGCATGCTTCCATTGCTTGGTGTCGATCTCTTATACTGAGCTTGGCACAGATCACTCCCACGCAGTCTGAAATCACCAGTGAGATTCAGGTCCTTAAGCCATCAGATATGCTGGAAAATAGCGAGCTGCTTTGTGTTGATCTACAAACAGATGAATTATGGAGTTCAGCATTTGAGGACCCAGCCCATTTCAAAAGTCTCGAAGAAAAACGGAATCCTATTTTCTCTAAAATAAAAAATTTGATGGTTAAGAAAGCTTCGGATGAGAATTTGGAGGTTGCCAGCTCCCTGCTTCGATCTTCTTATAATTTTTATCGTGAGAGCTCCTGTGTGATGCCCTCATCTGGTGTCAACTTGTATTTGGTTCTGTCTTGGTTAGCAAAGGATACACAATTGAGGCCGACCATGGATGGCGCCGAAATCCTTGACCTTAGCATTCCAAGAAAGCTTCTCTTGTGGGCTTACACATTACTGCATGGCCGTTACACAAACATCTCTTTTGTTGTAAAGCATTGTGAAGAAAATGCAAAGACTAAATTGAAAAAAGGAGCTGGAACCTCATCAGTGTCCCCGAACACAAGCATACCCAATACCGGCATTGTGCATACAGGTATTGCGAGAGATGGAACCGACCATACTGGAACCAGTGACGCAGAGGCCACTCCAGTGAAAACCATAGCACCCACCTCATTTCCCGAGGACTCCATTCAATCTGCCAATCCACCACCTTCCAGCATACATCAAGCGGGTTTATTTGCTTCTCCCTTACTGCAGCATTGCAACAACAGCGTTACAGAGAGGAGCAATACAACAGCAGATGGAGGAGGTTCGGACATAAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004864 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006996 GO:0008150 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0010941 GO:0014823 GO:0016043 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019888 GO:0019899 GO:0019902 GO:0019903 GO:0019904 GO:0022607 GO:0030234 GO:0030346 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031497 GO:0032268 GO:0032269 GO:0032515 GO:0034622 GO:0034724 GO:0034728 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0043933 GO:0044085 GO:0044092 GO:0044424 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051276 GO:0051336 GO:0051346 GO:0060255 GO:0060548 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0071103 GO:0071824 GO:0071840 GO:0080090 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1988

Amino Acids

222.67

Weight (kDa)

5.79

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0010312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32820 AT4G32820 AT4G32820
fragaria_vesca	FvH4_2g35140
malus_domestica	MD08G1108900.v1.1
prunus_persica	Prupe.1G443500_v2.0.a1 Prupe.1G443500_v2.0.a1
pyrus_communis	pycom08g09070 pycom10g04690
rosa_chinensis	RchiOBHm_Chr6g0306811
rosa_laevigata	RLG00000010764
rosa_multiflora	Rmu_sc0009381.1_g000003
rosa_roxburghii	Rroxscaffold_7G00161450
rosa_rugosa	Rorug06G0353200 Rorug06G0353300 Rorug06G0353300
rosa_samantha	Rh6AG465000 Rh6BG435800 Rh6CG479400 Rh6DG466300
rosa_wichuraiana	Rw6G040520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	5427
AarI	CACCTGC	1 cut(s)	244
AasI	GACNNNNNNGTC	1 cut(s)	4078
AatII	GACGTC	1 cut(s)	4973
Acc16I	TGCGCA	1 cut(s)	252
Acc36I	ACCTGC	1 cut(s)	244
AccB1I	GGYRCC	2 cut(s)	3904, 5534
AccB7I	CCANNNNNTGG	2 cut(s)	992, 5139
AccI	GTMKAC	3 cut(s)	2262, 3699, 4131
AccII	CGCG	1 cut(s)	4150
AciI	CCGC	7 cut(s)	1087, 1834, 2155, 3767, 4173, 4582, 5867
AclI	AACGTT	2 cut(s)	2442, 2721
AclWI	GGATC	8 cut(s)	227, 1167, 1825, 2242, 2982, 3087, 3344, 4118
AcoI	YGGCCR	4 cut(s)	599, 4566, 4928, 5599
AcuI	CTGAAG	4 cut(s)	329, 794, 2891, 2898
AcyI	GRCGYC	2 cut(s)	4970, 5535
AflII	CTTAAG	3 cut(s)	1604, 2669, 5216
AflIII	ACRYGT	4 cut(s)	697, 1287, 2102, 2956
AjiI	CACGTC	1 cut(s)	1288
AjnI	CCWGG	5 cut(s)	1123, 1514, 2736, 3565, 4591
AjuI	GAANNNNNNNTTGG	4 cut(s)	1581, 1613, 1913, 1945
AleI	CACNNNNGTG	1 cut(s)	5786
Alw21I	GWGCWC	7 cut(s)	2835, 3030, 3153, 3273, 3485, 4881, 5447
Alw26I	GTCTC	9 cut(s)	1791, 2796, 3664, 3773, 3973, 4064, 4704, 4961, 5324
Alw44I	GTGCAC	2 cut(s)	2831, 3149
AlwI	GGATC	8 cut(s)	227, 1167, 1825, 2242, 2982, 3087, 3344, 4118
AlwNI	CAGNNNCTG	3 cut(s)	1577, 2816, 5106
Ama87I	CYCGRG	1 cut(s)	5816
ApaLI	GTGCAC	2 cut(s)	2831, 3149
ArsI	GACNNNNNNTTYG	2 cut(s)	168, 200
AseI	ATTAAT	2 cut(s)	914, 3812
Asp700I	GAANNNNTTC	2 cut(s)	168, 4237
AspLEI	GCGC	5 cut(s)	253, 758, 2034, 4152, 5537
AspS9I	GGNCC	3 cut(s)	4816, 5212, 5299
AsuC2I	CCSGG	3 cut(s)	2635, 3168, 3431
AsuHPI	GGTGA	8 cut(s)	563, 1022, 1295, 2417, 2657, 3182, 3462, 5188
AvaI	CYCGRG	1 cut(s)	5816
AvaII	GGWCC	2 cut(s)	5212, 5299
AxyI	CCTNAGG	1 cut(s)	4290
BaeGI	GKGCMC	2 cut(s)	2835, 3153
BaeI	ACNNNNGTAYC	2 cut(s)	3848, 3881
BalI	TGGCCA	2 cut(s)	601, 4930
BanI	GGYRCC	2 cut(s)	3904, 5534
BanII	GRGCYC	4 cut(s)	1451, 3030, 3485, 5447
BarI	GAAGNNNNNNTAC	8 cut(s)	1940, 1972, 3585, 3617, 4614, 4646, 5113, 5145
BauI	CACGAG	2 cut(s)	612, 3860
BbsI	GAAGAC	5 cut(s)	1494, 1931, 2117, 3470, 4709
Bbv12I	GWGCWC	7 cut(s)	2835, 3030, 3153, 3273, 3485, 4881, 5447
BceAI	ACGGC	4 cut(s)	1101, 3475, 4581, 5586
BciT130I	CCWGG	5 cut(s)	1125, 1516, 2738, 3567, 4593
BciVI	GTATCC	3 cut(s)	1264, 2877, 5500
BclI	TGATCA	5 cut(s)	1252, 2362, 2488, 3001, 3916
BcnI	CCSGG	3 cut(s)	2635, 3168, 3431
BcoDI	GTCTC	9 cut(s)	1791, 2796, 3664, 3773, 3973, 4064, 4704, 4961, 5324
BfmI	CTRYAG	5 cut(s)	384, 2859, 4119, 4132, 5891
BfoI	RGCGCY	2 cut(s)	759, 5538
BfrI	CTTAAG	3 cut(s)	1604, 2669, 5216
BfuAI	ACCTGC	1 cut(s)	244
BfuI	GTATCC	3 cut(s)	1264, 2877, 5500
BglII	AGATCT	3 cut(s)	787, 3116, 4780
BlpI	GCTNAGC	1 cut(s)	2035
BmcAI	AGTACT	1 cut(s)	1093
Bme1390I	CCNGG	8 cut(s)	1125, 1516, 2635, 2738, 3168, 3431, 3567, 4593
Bme18I	GGWCC	2 cut(s)	5212, 5299
BmeT110I	CYCGRG	1 cut(s)	5816
BmgBI	CACGTC	1 cut(s)	1288
BmgT120I	GGNCC	3 cut(s)	4816, 5212, 5299
BmrFI	CCNGG	8 cut(s)	1125, 1516, 2635, 2738, 3168, 3431, 3567, 4593
BmrI	ACTGGG	1 cut(s)	4326
BmuI	ACTGGG	1 cut(s)	4326
BoxI	GACNNNNGTC	1 cut(s)	1729
BpiI	GAAGAC	5 cut(s)	1494, 1931, 2117, 3470, 4709
BplI	GAGNNNNNCTC	2 cut(s)	3012, 3044
BpmI	CTGGAG	4 cut(s)	921, 3039, 4728, 5769
Bpu10I	CCTNAGC	2 cut(s)	75, 5552
Bpu1102I	GCTNAGC	1 cut(s)	2035
BpuEI	CTTGAG	3 cut(s)	2559, 3074, 4431
BpuMI	CCSGG	3 cut(s)	2635, 3168, 3431
BsaBI	GATNNNNATC	2 cut(s)	279, 741
BsaHI	GRCGYC	2 cut(s)	4970, 5535
BsaXI	ACNNNNNCTCC	8 cut(s)	1081, 1111, 1955, 1985, 4487, 4517, 4880, 4910
Bse118I	RCCGGY	1 cut(s)	5714
Bse21I	CCTNAGG	1 cut(s)	4290
Bse3DI	GCAATG	3 cut(s)	2420, 5133, 5896
Bse8I	GATNNNNATC	2 cut(s)	279, 741
BseBI	CCWGG	5 cut(s)	1125, 1516, 2738, 3567, 4593
BseJI	GATNNNNATC	2 cut(s)	279, 741
BseMI	GCAATG	3 cut(s)	2420, 5133, 5896
BseRI	GAGGAG	5 cut(s)	656, 764, 3808, 5935, 5958
BseSI	GKGCMC	2 cut(s)	2835, 3153
BseYI	CCCAGC	3 cut(s)	424, 3386, 5302
Bsh1236I	CGCG	1 cut(s)	4150
BshNI	GGYRCC	2 cut(s)	3904, 5534
BsiHKAI	GWGCWC	7 cut(s)	2835, 3030, 3153, 3273, 3485, 4881, 5447
BsiHKCI	CYCGRG	1 cut(s)	5816
BsiSI	CCGG	4 cut(s)	2634, 3168, 3431, 5715
BslFI	GGGAC	2 cut(s)	4600, 5674
BsmAI	GTCTC	9 cut(s)	1791, 2796, 3664, 3773, 3973, 4064, 4704, 4961, 5324
BsmBI	CGTCTC	1 cut(s)	4961
BsmFI	GGGAC	2 cut(s)	4600, 5674
BsmI	GAATGC	8 cut(s)	364, 2201, 2528, 3445, 3553, 3760, 4662, 5556
BsoBI	CYCGRG	1 cut(s)	5816
Bsp1286I	GDGCHC	8 cut(s)	1451, 2835, 3030, 3153, 3273, 3485, 4881, 5447
Bsp1407I	TGTACA	3 cut(s)	1956, 2436, 3601
Bsp1720I	GCTNAGC	1 cut(s)	2035
Bsp19I	CCATGG	2 cut(s)	1265, 5526
BspACI	CCGC	7 cut(s)	1087, 1834, 2155, 3767, 4173, 4582, 5867
BspFNI	CGCG	1 cut(s)	4150
BspHI	TCATGA	3 cut(s)	160, 4245, 4999
BspMAI	CTGCAG	1 cut(s)	5895
BspMI	ACCTGC	1 cut(s)	244
BspPI	GGATC	8 cut(s)	227, 1167, 1825, 2242, 2982, 3087, 3344, 4118
BspQI	GCTCTTC	1 cut(s)	3626
BspT107I	GGYRCC	2 cut(s)	3904, 5534
BspTI	CTTAAG	3 cut(s)	1604, 2669, 5216
BsrDI	GCAATG	3 cut(s)	2420, 5133, 5896
BsrFI	RCCGGY	1 cut(s)	5714
BsrGI	TGTACA	3 cut(s)	1956, 2436, 3601
BssAI	RCCGGY	1 cut(s)	5714
BssNI	GRCGYC	2 cut(s)	4970, 5535
BssSI	CACGAG	2 cut(s)	612, 3860
BssT1I	CCWWGG	7 cut(s)	1167, 1265, 2200, 2697, 2796, 3582, 5526
Bst2BI	CACGAG	2 cut(s)	612, 3860
Bst2UI	CCWGG	5 cut(s)	1125, 1516, 2738, 3567, 4593
Bst6I	CTCTTC	4 cut(s)	3375, 3626, 4749, 5066
BstACI	GRCGYC	2 cut(s)	4970, 5535
BstAFI	CTTAAG	3 cut(s)	1604, 2669, 5216
BstAPI	GCANNNNNTGC	2 cut(s)	2289, 2419
BstAUI	TGTACA	3 cut(s)	1956, 2436, 3601
BstDSI	CCRYGG	2 cut(s)	1265, 5526
BstENI	CCTNNNNNAGG	1 cut(s)	3536
BstFNI	CGCG	1 cut(s)	4150
BstH2I	RGCGCY	2 cut(s)	759, 5538
BstHHI	GCGC	5 cut(s)	253, 758, 2034, 4152, 5537
BstMAI	GTCTC	9 cut(s)	1791, 2796, 3664, 3773, 3973, 4064, 4704, 4961, 5324
BstMWI	GCNNNNNNNGC	9 cut(s)	812, 2161, 2289, 2419, 2525, 3326, 4147, 5135, 5907
BstNI	CCWGG	5 cut(s)	1125, 1516, 2738, 3567, 4593
BstPAI	GACNNNNGTC	1 cut(s)	1729
BstSCI	CCNGG	8 cut(s)	1123, 1514, 2633, 2736, 3166, 3429, 3565, 4591
BstSFI	CTRYAG	5 cut(s)	384, 2859, 4119, 4132, 5891
BstSLI	GKGCMC	2 cut(s)	2835, 3153
BstUI	CGCG	1 cut(s)	4150
BstV2I	GAAGAC	5 cut(s)	1494, 1931, 2117, 3470, 4709
BstX2I	RGATCY	6 cut(s)	232, 787, 2987, 3116, 4123, 4780
BstYI	RGATCY	6 cut(s)	232, 787, 2987, 3116, 4123, 4780
Bsu36I	CCTNAGG	1 cut(s)	4290
BsuI	GTATCC	3 cut(s)	1264, 2877, 5500
BtgI	CCRYGG	2 cut(s)	1265, 5526
BtgZI	GCGATG	1 cut(s)	2509
BtrI	CACGTC	1 cut(s)	1288
BtsI	GCAGTG	1 cut(s)	2294
BveI	ACCTGC	1 cut(s)	244
CaiI	CAGNNNCTG	3 cut(s)	1577, 2816, 5106
CciI	TCATGA	3 cut(s)	160, 4245, 4999
CfoI	GCGC	5 cut(s)	253, 758, 2034, 4152, 5537
Cfr10I	RCCGGY	1 cut(s)	5714
Cfr13I	GGNCC	3 cut(s)	4816, 5212, 5299
CseI	GACGC	2 cut(s)	4199, 5780
DinI	GGCGCC	1 cut(s)	5536
DraI	TTTAAA	4 cut(s)	1902, 2713, 3988, 4197
DrdI	GACNNNNNNGTC	1 cut(s)	4078
DseDI	GACNNNNNNGTC	1 cut(s)	4078
EaeI	YGGCCR	4 cut(s)	599, 4566, 4928, 5599
Eam1104I	CTCTTC	4 cut(s)	3375, 3626, 4749, 5066
EarI	CTCTTC	4 cut(s)	3375, 3626, 4749, 5066
EciI	GGCGGA	3 cut(s)	1102, 1823, 4597
Ecl136II	GAGCTC	3 cut(s)	3028, 3483, 5445
Eco130I	CCWWGG	7 cut(s)	1167, 1265, 2200, 2697, 2796, 3582, 5526
Eco24I	GRGCYC	4 cut(s)	1451, 3030, 3485, 5447
Eco32I	GATATC	1 cut(s)	841
Eco47I	GGWCC	2 cut(s)	5212, 5299
Eco53kI	GAGCTC	3 cut(s)	3028, 3483, 5445
Eco57I	CTGAAG	4 cut(s)	329, 794, 2891, 2898
Eco81I	CCTNAGG	1 cut(s)	4290
Eco88I	CYCGRG	1 cut(s)	5816
EcoICRI	GAGCTC	3 cut(s)	3028, 3483, 5445
EcoNI	CCTNNNNNAGG	1 cut(s)	3536
EcoO109I	RGGNCCY	3 cut(s)	4816, 5212, 5299
EcoRI	GAATTC	5 cut(s)	137, 1526, 1769, 1878, 2911
EcoRII	CCWGG	5 cut(s)	1123, 1514, 2736, 3565, 4591
EcoRV	GATATC	1 cut(s)	841
EcoT14I	CCWWGG	7 cut(s)	1167, 1265, 2200, 2697, 2796, 3582, 5526
EcoT22I	ATGCAT	6 cut(s)	1393, 2023, 2601, 3076, 4143, 4775
EcoT38I	GRGCYC	4 cut(s)	1451, 3030, 3485, 5447
EgeI	GGCGCC	1 cut(s)	5536
EheI	GGCGCC	1 cut(s)	5536
ErhI	CCWWGG	7 cut(s)	1167, 1265, 2200, 2697, 2796, 3582, 5526
Esp3I	CGTCTC	1 cut(s)	4961
FalI	AAGNNNNNCTT	8 cut(s)	222, 254, 1598, 1630, 4395, 4427, 5558, 5590
FaqI	GGGAC	2 cut(s)	4600, 5674
FauI	CCCGC	1 cut(s)	5860
FauNDI	CATATG	1 cut(s)	4213
FbaI	TGATCA	5 cut(s)	1252, 2362, 2488, 3001, 3916
FblI	GTMKAC	3 cut(s)	2262, 3699, 4131
FriOI	GRGCYC	4 cut(s)	1451, 3030, 3485, 5447
FspI	TGCGCA	1 cut(s)	252
GlaI	GCGC	5 cut(s)	252, 757, 2033, 4151, 5536
GsaI	CCCAGC	3 cut(s)	428, 3390, 5306
GsuI	CTGGAG	4 cut(s)	921, 3039, 4728, 5769
HaeII	RGCGCY	2 cut(s)	759, 5538
HapII	CCGG	4 cut(s)	2634, 3168, 3431, 5715
HgaI	GACGC	2 cut(s)	4199, 5780
HhaI	GCGC	5 cut(s)	253, 758, 2034, 4152, 5537
Hin1I	GRCGYC	2 cut(s)	4970, 5535
Hin6I	GCGC	5 cut(s)	251, 756, 2032, 4150, 5535
HinP1I	GCGC	5 cut(s)	251, 756, 2032, 4150, 5535
HincII	GTYRAC	5 cut(s)	718, 1866, 2725, 4627, 5473
HindII	GTYRAC	5 cut(s)	718, 1866, 2725, 4627, 5473
HindIII	AAGCTT	5 cut(s)	804, 2517, 3993, 5376, 5567
HpaI	GTTAAC	3 cut(s)	1866, 2725, 4627
HpaII	CCGG	4 cut(s)	2634, 3168, 3431, 5715
HphI	GGTGA	8 cut(s)	563, 1022, 1295, 2417, 2657, 3182, 3462, 5188
Hpy99I	CGWCG	2 cut(s)	3267, 4975
HpyCH4IV	ACGT	9 cut(s)	1287, 2259, 2442, 2721, 3652, 4729, 4809, 4834, 4970
HpyF10VI	GCNNNNNNNGC	9 cut(s)	812, 2161, 2289, 2419, 2525, 3326, 4147, 5135, 5907
HpySE526I	ACGT	9 cut(s)	1287, 2259, 2442, 2721, 3652, 4729, 4809, 4834, 4970
Hsp92I	GRCGYC	2 cut(s)	4970, 5535
HspAI	GCGC	5 cut(s)	251, 756, 2032, 4150, 5535
KasI	GGCGCC	1 cut(s)	5534
Ksp22I	TGATCA	5 cut(s)	1252, 2362, 2488, 3001, 3916
KspAI	GTTAAC	3 cut(s)	1866, 2725, 4627
LguI	GCTCTTC	1 cut(s)	3626
MaeII	ACGT	9 cut(s)	1287, 2259, 2442, 2721, 3652, 4729, 4809, 4834, 4970
MfeI	CAATTG	1 cut(s)	5513
MflI	RGATCY	6 cut(s)	232, 787, 2987, 3116, 4123, 4780
MhlI	GDGCHC	8 cut(s)	1451, 2835, 3030, 3153, 3273, 3485, 4881, 5447
MlsI	TGGCCA	2 cut(s)	601, 4930
MluNI	TGGCCA	2 cut(s)	601, 4930
Mly113I	GGCGCC	1 cut(s)	5535
MlyI	GAGTC	4 cut(s)	41, 653, 3666, 5816
MmeI	TCCRAC	4 cut(s)	1096, 1392, 4677, 4953
Mox20I	TGGCCA	2 cut(s)	601, 4930
Mph1103I	ATGCAT	6 cut(s)	1393, 2023, 2601, 3076, 4143, 4775
MroXI	GAANNNNTTC	2 cut(s)	168, 4237
MscI	TGGCCA	2 cut(s)	601, 4930
MslI	CAYNNNNRTG	8 cut(s)	436, 612, 2961, 3009, 3360, 3732, 3734, 5786
Msp20I	TGGCCA	2 cut(s)	601, 4930
MspA1I	CMGCKG	3 cut(s)	424, 2155, 4118
MspCI	CTTAAG	3 cut(s)	1604, 2669, 5216
MspI	CCGG	4 cut(s)	2634, 3168, 3431, 5715
MspR9I	CCNGG	8 cut(s)	1125, 1516, 2635, 2738, 3168, 3431, 3567, 4593
MunI	CAATTG	1 cut(s)	5513
Mva1269I	GAATGC	8 cut(s)	364, 2201, 2528, 3445, 3553, 3760, 4662, 5556
MvaI	CCWGG	5 cut(s)	1125, 1516, 2738, 3567, 4593
MvnI	CGCG	1 cut(s)	4150
MwoI	GCNNNNNNNGC	9 cut(s)	812, 2161, 2289, 2419, 2525, 3326, 4147, 5135, 5907
NarI	GGCGCC	1 cut(s)	5535
NciI	CCSGG	3 cut(s)	2635, 3168, 3431
NcoI	CCATGG	2 cut(s)	1265, 5526
NdeI	CATATG	1 cut(s)	4213
NmuCI	GTSAC	6 cut(s)	1283, 2340, 2590, 4017, 4960, 5768
NsbI	TGCGCA	1 cut(s)	252
NsiI	ATGCAT	6 cut(s)	1393, 2023, 2601, 3076, 4143, 4775
OliI	CACNNNNGTG	1 cut(s)	5786
PaeI	GCATGC	5 cut(s)	84, 567, 4145, 4173, 5129
PagI	TCATGA	3 cut(s)	160, 4245, 4999
PaqCI	CACCTGC	1 cut(s)	244
PciI	ACATGT	3 cut(s)	697, 2102, 2956
PciSI	GCTCTTC	1 cut(s)	3626
PctI	GAATGC	8 cut(s)	364, 2201, 2528, 3445, 3553, 3760, 4662, 5556
PdmI	GAANNNNTTC	2 cut(s)	168, 4237
PflFI	GACNNNGTC	1 cut(s)	3804
PflMI	CCANNNNNTGG	2 cut(s)	992, 5139
PfoI	TCCNGGA	1 cut(s)	3429
PleI	GAGTC	4 cut(s)	40, 652, 3666, 5816
PluTI	GGCGCC	1 cut(s)	5538
PpsI	GAGTC	4 cut(s)	40, 652, 3666, 5816
PpuMI	RGGWCCY	2 cut(s)	5212, 5299
PscI	ACATGT	3 cut(s)	697, 2102, 2956
PshAI	GACNNNNGTC	1 cut(s)	1729
PshBI	ATTAAT	2 cut(s)	914, 3812
PsiI	TTATAA	1 cut(s)	5427
Psp124BI	GAGCTC	3 cut(s)	3030, 3485, 5447
Psp1406I	AACGTT	2 cut(s)	2442, 2721
Psp5II	RGGWCCY	2 cut(s)	5212, 5299
Psp6I	CCWGG	5 cut(s)	1123, 1514, 2736, 3565, 4591
PspFI	CCCAGC	3 cut(s)	424, 3386, 5302
PspGI	CCWGG	5 cut(s)	1123, 1514, 2736, 3565, 4591
PspPI	GGNCC	3 cut(s)	4816, 5212, 5299
PspPPI	RGGWCCY	2 cut(s)	5212, 5299
PsrI	GAACNNNNNNTAC	4 cut(s)	4349, 4381, 5740, 5772
PstI	CTGCAG	1 cut(s)	5895
PstNI	CAGNNNCTG	3 cut(s)	1577, 2816, 5106
PsuI	RGATCY	6 cut(s)	232, 787, 2987, 3116, 4123, 4780
PsyI	GACNNNGTC	1 cut(s)	3804
PvuII	CAGCTG	2 cut(s)	424, 4118
RseI	CAYNNNNRTG	8 cut(s)	436, 612, 2961, 3009, 3360, 3732, 3734, 5786
SacI	GAGCTC	3 cut(s)	3030, 3485, 5447
SapI	GCTCTTC	1 cut(s)	3626
Sau96I	GGNCC	3 cut(s)	4816, 5212, 5299
ScaI	AGTACT	1 cut(s)	1093
SchI	GAGTC	4 cut(s)	41, 653, 3666, 5816
ScrFI	CCNGG	8 cut(s)	1125, 1516, 2635, 2738, 3168, 3431, 3567, 4593
SduI	GDGCHC	8 cut(s)	1451, 2835, 3030, 3153, 3273, 3485, 4881, 5447
SfcI	CTRYAG	5 cut(s)	384, 2859, 4119, 4132, 5891
SfoI	GGCGCC	1 cut(s)	5536
SinI	GGWCC	2 cut(s)	5212, 5299
SmiMI	CAYNNNNRTG	8 cut(s)	436, 612, 2961, 3009, 3360, 3732, 3734, 5786
SmlI	CTYRAG	6 cut(s)	1604, 2574, 2669, 3053, 4446, 5216
SmoI	CTYRAG	6 cut(s)	1604, 2574, 2669, 3053, 4446, 5216
SphI	GCATGC	5 cut(s)	84, 567, 4145, 4173, 5129
SsiI	CCGC	7 cut(s)	1087, 1834, 2155, 3767, 4173, 4582, 5867
SspDI	GGCGCC	1 cut(s)	5534
SspI	AATATT	1 cut(s)	3112
SstI	GAGCTC	3 cut(s)	3030, 3485, 5447
StyD4I	CCNGG	8 cut(s)	1123, 1514, 2633, 2736, 3166, 3429, 3565, 4591
StyI	CCWWGG	7 cut(s)	1167, 1265, 2200, 2697, 2796, 3582, 5526
TaiI	ACGT	9 cut(s)	1290, 2262, 2445, 2724, 3655, 4732, 4812, 4837, 4973
TatI	WGTACW	8 cut(s)	1091, 1174, 1956, 2436, 3210, 3601, 3879, 4718
TseFI	GTSAC	6 cut(s)	1283, 2340, 2590, 4017, 4960, 5768
Tsp45I	GTSAC	6 cut(s)	1283, 2340, 2590, 4017, 4960, 5768
TspGWI	ACGGA	7 cut(s)	44, 211, 692, 1624, 2905, 5083, 5347
Tth111I	GACNNNGTC	1 cut(s)	3804
Van91I	CCANNNNNTGG	2 cut(s)	992, 5139
Vha464I	CTTAAG	3 cut(s)	1604, 2669, 5216
VneI	GTGCAC	2 cut(s)	2831, 3149
VpaK11BI	GGWCC	2 cut(s)	5212, 5299
VspI	ATTAAT	2 cut(s)	914, 3812
XagI	CCTNNNNNAGG	1 cut(s)	3536
XbaI	TCTAGA	4 cut(s)	745, 1063, 1186, 4186
XmiI	GTMKAC	3 cut(s)	2262, 3699, 4131
XmnI	GAANNNNTTC	2 cut(s)	168, 4237
ZraI	GACGTC	1 cut(s)	4971
ZrmI	AGTACT	1 cut(s)	1093
Zsp2I	ATGCAT	6 cut(s)	1393, 2023, 2601, 3076, 4143, 4775

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.