Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0010312

Physical Location & Seq

Genomic Coordinates Forward (+)

64288412 .. 64297930

Gene Structure 9519 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G040520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 5826 bp

ATGTTCTCAATTGCAGCTATCAATGACGATACTGACTCCAAAGGCACGTGGGAGCCCTTAGCTCCTACCAAAGAAGCTCAGGAATTTCATCTCTCACAAACTTATCATGAAGGACTTCACAAGTTACAAACTAAAGAATACAAGAGGGCTAGTGAGTTGTTAGAATCTGTTCTAAAAGACCCTTTAATAGAAAACGCGCGGGTGGATGGTAATGTCAGCGATTGTCATCTATTGCAACTCAGATTTTTGGCACTGAAGAACCTTGCCAATGTTTTTCTTCAACAAGGTTCAGAACATTATGAGAGTGCCCTACGATGTTATCTCCAAGCCGTAGAGATTGATACCAAAGATTCTGTTGTCTGGAACCAGCTCGGAACATTATCATGCTCGATGGGCTCTCTGAGTATATCACGTTGGGCATTTGAGCAAGGGCTTTTGTGCAGCCCTAATAATTGGAACTGCATGGAGAAATTGTTGGAAGTTCTTATTGCTATCGGTGATGAGGTTGCGTGCCTTTCTGTGGCAGAGTTAATTTTGAGGCATTGGCCATCACATTCTCGTGCTTTGCATGTCAAGAAAACAATTGAAGAGTCAGAGCCAGTTCCATTTGCTCCTAGAGGTATAGATAAGCTGGAACCTAAACATGTCCGTCTCAAATTTGTTGACAAGAGAAAAGCATCTCAAGCACTTCTGGAGGAGGACGTTGCATCCAAGAAGCTGAACCAGAGCATGGATTTGAACCTTGCAGACGCTACTTGGGCAGCTCTTGCTGATGCACTCTTGGATATCTTACTTCCGTTGAATGGCTGTAGATCTGAGATGGGGAATGCAAAAGAATACAGATCTGGAGACATCAGATTAATTTTACACTTACCTTCTAGTTCAGAAGGTAACAGAGGGTCTGAGGAAAGAAAAGGACATAACTTGGCCCCAGTTGGTGAAAATACCTCTTCTGGTGATTGCAACACTGGAAGAACAGGTGTTAAAGAGAAAGACACAAGTCTTCTAGAATTCCAAAAACAGGAGAGGCGGAGTACTCGCCTTGAAAGGCTTAGAACTCGTAAACCAGGGAAAGAAGATCTTGACTTTGCTAATGGTAAAGCTCAGGCCAAGGTTGTTATTCAGTGTCTAGAACCTTTTATTGCTGGCGGATCAGGAATCAAAGATTCCAATCATTCTAGTAATCATTCTGTTTCATGTCCTGATCAAGCTAATCCCTGGGATACTGAATATGGTGATGTTTGCAGATTTGTTGAAAAAGCTTCAAAGAACTATGGTGCTTTCCATTTGGCTCACTTGCTTTTGGAAGAGGTTGCAAGTAGAGATCTTCACCATCAGGATGCATTTGTTAAGTTTCTGGACTTGGAAAAGATGACAAGGAATTGGGGGAAGGATAGGACCCCTGAATGCTGCCTTTTCCTTGCTGAGCTTTATTATGACCTTGGTTCAGTATCTGATGCTTCAAGGTTGTCAGTATTCATGTCCGAGGCATCTTATCATCTTTGTAAGATTCTCGAATCAGTAGCTTTGGAAGATGAAAGCATTTCTGGGCTTAAGAGACTCTTCGGTAATAATGGAATATCAGCCGACAATTCTGTTTGCAAGGATGTATCATTAGGTGACAAGTTGTTAGCAAGTAGCTCCTTTTGGGTTCGGTTTTTCTGGTTAAGTGGACGATTATCTATTTTAGATGGCAACAAGGAAAAAGCCCACCAAGAATTCTGTATATCCTTGTCGCTTTTGGCAAACAAGGAAAATATCAGTGATTCGCAGCGTGTAATCCGCCTTCCATATTGCAAGGTTGTTAAAGAGTTCACTGTTGGTAGGATTCTCCATGAAATTAACATTTTAAAGGTTGATTTCTTGACGCAGAAGACTTTAGGTGAGATGATTGAGAAGGAAATGTATATGGAGTGCATGACCTTGCTTGTTCCGCTTCTATTTGCCACAAGAAATGTGCCCCCTGATGCATTACCTCTACGCTTAGCTAATAAAGGAGGCGAAGGAATTACTTCAGTTGAACTGTCAGCACTAGACATTTTAATCAAAGCTTGTGAAAAGACAAAACCTGTGGATGTTGACATTTATTTGAATTGTCATCGTCGGAAACTGCAAATTCTTATGGCAGCAGCAGGGATTGATGAATGCCTGGCTTCTGTAAATCCTTCCTTTCTAAATCAGGATTCAAATGAAAGTTCGAGCAAGCAGTGCTGGAATTTCTTGGTTGCAGAGGAAGTAAAGGCCATTTCTCAATGTGCGTCCCAAGTGAAGAACTTTATTGATCAACCTGGAGCTTCTGACAGCAATTCTGTTCCAATGAGCAGCATAGGTGATCTCCAATGCTTGCTCTTGTCAGTCATGTGTAATGTTGCAAGCATATTCCTCTGTAAGAAATCTACTGAGCTAGTGACGGCTGATGAAATTGAACAAAGTTGCTTTATTGAAGCTTCCATTGCATTCTGCAAACTTCAACACCTCAACCACATGATACCTGTTAAAACTCAAGTTGACTTAATTGTCACCATGCACGATCTACTGGCAGAATATGGACTCTGCTGTGCGGGTCAGGGTACTGAAAAGGAGGAAGGAATGTTTCTTAAATTTGCAATTAAGCATCTATTGGCCTTGGATATGAAGTTTAAATCTACCTTTAACTCATCAAGTAAAGAAACAACTGAAGACAACGAGCTGCTTGACCTAAATAGTCCTGCCAAAATAACTCTAAATGAATCAAAATCAGATACACTAGATGTGGAAATGGTTCACACTGGAAGAGATGAAATCAGTACCGCAGGGAAGGATGTATCAGAAGCAATATCATCAAAAAACATTTTATCTGATAAAGCTCTAGAGGAAGATCTTAATTTGGAATCAGAAGGTAGAAAGCAAGATGAAGATGCAAGCGATCAATTGAATGAAGACGAAGATGAACTCATAGAAGATGAAAGGGAGGAGCTTGAGTTGAAAATTGATTATGCCTTGGATCAGTGTTTCTTCTGCTTATATGGTCTAAATATTAGATCTGATTCATCCTATGAAGATGACTTAGCTGTGCACAAAAATACTAGCCCTGGTGATTACCAGACAAAGGAACAATGTGCTGATGTTTTTCAGTACATACTTCCTTATGCAAAGGCTTCTTCTAGGACAGGACTAGTCAAAGTTCGAAGAGTACTCAGAGCCATACGCAAACACTTTCCACAACCACCAGAAGATGTTTTGGCTGGAAATGCAATAGATAAGTTCTTAGATGATCTCAATTTATGTGAAGATAAGCTCTCAGATGAGGCTGGGTCTGACGGCTTTCTTGAGACCATAACAAGCTCTGAACCATATCTGGATGTCTATTGCAATTTATATTATTTCCTTGCCCTCTCTGAGGAAATGAGTGCTACAGACAAGTGGCCTGGCTTTGTGCTTACAAAGGAAGGGGAAGAATTTGTACAGCATAATGCGAATCTCTTCAAATATGATTTACTCTACAACCCTCTGCGTTTTGAAAGTTGGCAAAGACTAGGACATATCTATGACGAGGAAGTGGACTTGTTACTAAATGATGGCAGTAAACACATCAATGTGGCAGGATGGAGGAAGAATGTTACATTACCTCAGAGGGTTGAGACAAGTCGAAGGAGGAGTAGGCGGTGTCTGTTAATGAGTTTGGCTTTGGCAAAGACATCAGCTCAGCAGAGTGAGATACACGAGTTATTGGCATTGGTATACTATGATAGCCTTCAAAGCGTGGTGCCATTTTATGATCAACGAACTGTTGTACCCTTGAAGGATGCAGCATGGGTGGTGTTTTGCGAGAACTCGATGAGACACTTTAAAAAGGCTTTTGCTCACAAGCAAGACTGGTCCCATGCTTACTATATTGGGAAGCTCTGTGAAAAGCTTGGGTACTCCTATGAGACATCTTTATCATATTATGATAAAGCTATTGCTCTGAATCCAACAGCTGTAGATCCTGTTTACAGGATGCATGCTTCGCGCCTGAAATTACTTTTTACATGTGGAAAACAAAATCTAGAAGCTTTAAAGGTTCTTTCAGCATATGCCTTTAGTCAATCAACGAAGGATGCTGTCATGACAATGTTAGGTGACATGGATGCGGAAATGTCAAATTCACCAAAGGATAGAAGCACAGAAACAAACTCTGAGAAGGTGAAGCATGAAGATGCGGTTAAATCAGAGGTGTGGAACATGCTTTACAGCGACTGTCTTTGTGCCCTTGAAACTTGTATTGAAGGGGAGCTTAAACATTTTCATAAAGCCAGATATATGCTTGCACAAGGTCTGCATCGAAGAGGGGAAAGTGGTGCATCTGAGAGAGCAAAAGATGAACTCTCTTTTTGCTTCAAGTCATCTCGGTCATCATTTACAATAAATATGTGGGAAATTGATAGTACAGCCAAAAAAGGAAGGCGGAAAACTCCTGGAGTTTGCGGGAGCAAAAGGTCCCTTGAGGTTAACTTACCTGAAAGTTCTAGAAAATTCATCACTTGCATTAGGAAATATCTTCTGTTCTATTTGAAACTGTTGGAGGAGACTGGAGACATCTGTACTCTTGACCGTGCTTATATCTCTCTTCGGTCTGATAAGAGGTTTTCTCTATGCATTGAAGATCTTGTTCCAGTTGCCCTTGGGAGGTATGTAAAGGCCCTTGTTTCATCGATCCGCCAAGTTGAAACTGTTGGCTCTGGTGCTGTAGATAATTCCGAGCATATATTGGAGAAAGTGTTTTCTTTGTTCATGGAACAGGGGAACTTATGGCCTGAAATATGTGGTTTGCCTGAGATTAAGGTCACAGAAACATCAGAAAGCAGTTTATATGGATATCTTCATGAACATATCATATCATTAGAGGAAAATGGTAAATTGGACACTCTCGAAGCCATAAATGAGAAGATTCGAAAGCGTTTCAAGAATCCAAAATTGTCAAACAGCAACTGTGCGAAAGTTTGCAGGCATGCATCCATTGCTTGGTGCAGATCTCTTATATTGTGGTTGGCACAGATCACTCCTTCACAGTCTGAAATCGCAAGTGAGATTCAGGTTCTAAATCCTTCAGATGGTGGGTTGGAAAATGGCCAGCTGCTCTGTGTTGATTTGCAGACAGATGAATTGTGGAGTTCAGCTTTTGAGGACCCAACCCATTTTAAAAAGCTTGAGGCAAAACGAAATCCTGTTTTCTCTAAAATAAAGAACTTAGTTGTTAAGAAAGCTTCAGATGAAAATTTAGAGACTGCCAGTGCTTTGCTTCGATCTTCGTACAACTTCTATCGTGAGAGCTCAAGTGTAATGCCTTCATCCGGTGTCAATCTGTATTTAGTTTCATCATGGTTAGCAAGGGATACACAATTCAGACCAAGCACGGAGGGGGCTGAAATCCTTGACCTTAGCATTCCAAGGAAGCTTCTGTTGTGGGCTTACACACTATTGCATGGCCGTTACACAAACATCTCTTTTGTTGTAAAGCATTGTGAAGAAAATGCAAGGTCTAAAATGAAAAAAGGAGCAGGAACCTCATCTGTGCCCTCAAACACAAGCATAGCAAACACCACCACTGCTCACACAGCATCGGTAGCAGCTTGTGGCAGAGACGGAGTCAGACATAGTGGAACCAGCGACACAGATCCAGCAAACGCAGTAGTATCTACCTCATTGCCTGAGAGCACAACGCAATGTACAAATCAACCACCTTCTGACACATACCAGACGAGTTCATTTGCTGCTCCCCCACTTCAGCATTGCAACAACCCCGTTACAGAGAGGAGCAATACAACAGCAGCAGATGAAGGAGCTTCAGACAAAGTTGACATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0004857 GO:0004864 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006996 GO:0008150 GO:0009892 GO:0009987 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0010941 GO:0014823 GO:0016043 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019888 GO:0019899 GO:0019902 GO:0019903 GO:0019904 GO:0022607 GO:0030234 GO:0030346 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031497 GO:0032268 GO:0032269 GO:0032515 GO:0034622 GO:0034724 GO:0034728 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0043086 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0043933 GO:0044085 GO:0044092 GO:0044424 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051276 GO:0051336 GO:0051346 GO:0060255 GO:0060548 GO:0065003 GO:0065004 GO:0065007 GO:0065009 GO:0071103 GO:0071824 GO:0071840 GO:0080090 GO:0098772

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

1941

Amino Acids

217.34

Weight (kDa)

5.51

Isoelectric Point (pI)

49.1

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Publication-ready

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Orthologous Genes (Group: OG0010312)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G32820 AT4G32820 AT4G32820
fragaria_vesca	FvH4_2g35140
malus_domestica	MD08G1108900.v1.1
prunus_persica	Prupe.1G443500_v2.0.a1 Prupe.1G443500_v2.0.a1
pyrus_communis	pycom08g09070 pycom10g04690
rosa_chinensis	RchiOBHm_Chr6g0306811
rosa_laevigata	RLG00000010764
rosa_multiflora	Rmu_sc0009381.1_g000003
rosa_roxburghii	Rroxscaffold_7G00161450
rosa_rugosa	Rorug06G0353200 Rorug06G0353300 Rorug06G0353300
rosa_samantha	Rh6AG465000 Rh6BG435800 Rh6CG479400 Rh6DG466300
rosa_wichuraiana	Rw6G040520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	2516
AccB1I	GGYRCC	1 cut(s)	3745
AccB7I	CCANNNNNTGG	2 cut(s)	730, 4983
AccI	GTMKAC	1 cut(s)	3720
AccII	CGCG	3 cut(s)	197, 199, 3991
AclWI	GGATC	5 cut(s)	1159, 2991, 3959, 4669, 5630
AcoI	YGGCCR	3 cut(s)	545, 5089, 5446
AcuI	CTGAAG	7 cut(s)	275, 1998, 2697, 5052, 5211, 5729, 5790
AcvI	CACGTG	1 cut(s)	48
AflII	CTTAAG	1 cut(s)	1553
AflIII	ACRYGT	2 cut(s)	643, 4010
AhlI	ACTAGT	1 cut(s)	3154
AjnI	CCWGG	7 cut(s)	1066, 1217, 2148, 2287, 3070, 3406, 4435
Alw21I	GWGCWC	3 cut(s)	3057, 5294, 5678
Alw44I	GTGCAC	1 cut(s)	3053
AlwI	GGATC	5 cut(s)	1159, 2991, 3959, 4669, 5630
AlwNI	CAGNNNCTG	3 cut(s)	1454, 4218, 4950
ApaLI	GTGCAC	1 cut(s)	3053
AseI	ATTAAT	1 cut(s)	860
Asp700I	GAANNNNTTC	5 cut(s)	114, 168, 2011, 2760, 3461
AspLEI	GCGC	2 cut(s)	199, 3993
AspS9I	GGNCC	6 cut(s)	928, 1398, 3858, 4458, 4660, 5146
AsuII	TTCGAA	2 cut(s)	3166, 4912
AvaII	GGWCC	4 cut(s)	1398, 3858, 4458, 5146
BaeGI	GKGCMC	5 cut(s)	310, 1962, 3057, 4231, 5538
BaeI	ACNNNNGTAYC	4 cut(s)	3689, 3722, 3756, 3789
BalI	TGGCCA	2 cut(s)	547, 5091
BanI	GGYRCC	1 cut(s)	3745
BanII	GRGCYC	3 cut(s)	57, 398, 5294
BarI	GAAGNNNNNNTAC	4 cut(s)	1770, 1802, 3426, 3458
BauI	CACGAG	2 cut(s)	558, 3701
BbrPI	CACGTG	1 cut(s)	48
BbsI	GAAGAC	4 cut(s)	995, 1880, 2685, 2925
Bbv12I	GWGCWC	3 cut(s)	3057, 5294, 5678
BccI	CCATC	9 cut(s)	200, 385, 556, 814, 1341, 1685, 3551, 3579, 5066
BceAI	ACGGC	4 cut(s)	314, 2427, 3316, 5433
BciT130I	CCWGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
BciVI	GTATCC	2 cut(s)	1216, 5347
BclI	TGATCA	3 cut(s)	1204, 2281, 3757
BcuI	ACTAGT	1 cut(s)	3154
BfmI	CTRYAG	4 cut(s)	808, 3393, 3960, 4707
BfrI	CTTAAG	1 cut(s)	1553
BfuI	GTATCC	2 cut(s)	1216, 5347
BglII	AGATCT	8 cut(s)	812, 842, 1078, 1324, 2857, 3020, 4624, 4991
BlpI	GCTNAGC	3 cut(s)	1425, 1984, 3684
BmcAI	AGTACT	2 cut(s)	1036, 3174
Bme1390I	CCNGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
Bme18I	GGWCC	4 cut(s)	1398, 3858, 4458, 5146
BmgT120I	GGNCC	6 cut(s)	928, 1398, 3858, 4458, 4660, 5146
BmrFI	CCNGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
BmrI	ACTGGG	1 cut(s)	926
BmuI	ACTGGG	1 cut(s)	926
BoxI	GACNNNNGTC	1 cut(s)	999
BpiI	GAAGAC	4 cut(s)	995, 1880, 2685, 2925
BplI	GAGNNNNNCTC	2 cut(s)	4594, 4626
BpmI	CTGGAG	5 cut(s)	713, 867, 2310, 4458, 4572
Bpu10I	CCTNAGC	4 cut(s)	58, 78, 1104, 5399
Bpu1102I	GCTNAGC	3 cut(s)	1425, 1984, 3684
Bpu14I	TTCGAA	2 cut(s)	3166, 4912
BpuEI	CTTGAG	7 cut(s)	666, 2487, 2978, 3329, 4484, 5189, 5278
Bsa29I	ATCGAT	1 cut(s)	4673
BsaAI	YACGTR	1 cut(s)	48
BsaBI	GATNNNNATC	2 cut(s)	225, 1170
BsaI	GGTCTC	1 cut(s)	3305
BsaWI	WCCGGW	1 cut(s)	5312
BsaXI	ACNNNNNCTCC	6 cut(s)	458, 488, 2945, 2975, 4724, 4754
Bse1I	ACTGG	9 cut(s)	599, 932, 973, 2541, 2773, 3860, 4555, 4634, 5250
Bse3DI	GCAATG	5 cut(s)	2451, 4977, 5663, 5690, 5749
Bse8I	GATNNNNATC	2 cut(s)	225, 1170
BseBI	CCWGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
BseCI	ATCGAT	1 cut(s)	4673
BseJI	GATNNNNATC	2 cut(s)	225, 1170
BseMI	GCAATG	5 cut(s)	2451, 4977, 5663, 5690, 5749
BseNI	ACTGG	9 cut(s)	599, 932, 973, 2541, 2773, 3860, 4555, 4634, 5250
BseRI	GAGGAG	5 cut(s)	710, 2966, 3649, 4559, 5788
BseSI	GKGCMC	5 cut(s)	310, 1962, 3057, 4231, 5538
BseYI	CCCAGC	1 cut(s)	3290
BsgI	GTGCAG	2 cut(s)	460, 5008
Bsh1236I	CGCG	3 cut(s)	197, 199, 3991
BshNI	GGYRCC	1 cut(s)	3745
BshVI	ATCGAT	1 cut(s)	4673
BsiHKAI	GWGCWC	3 cut(s)	3057, 5294, 5678
BsiSI	CCGG	1 cut(s)	5313
BslFI	GGGAC	3 cut(s)	2245, 3844, 4444
BsmBI	CGTCTC	2 cut(s)	656, 5595
BsmFI	GGGAC	3 cut(s)	2245, 3844, 4444
BsmI	GAATGC	5 cut(s)	832, 1412, 2150, 2456, 5403
Bso31I	GGTCTC	1 cut(s)	3305
Bsp119I	TTCGAA	2 cut(s)	3166, 4912
Bsp1286I	GDGCHC	9 cut(s)	57, 310, 398, 1962, 3057, 4231, 5294, 5538, 5678
Bsp1407I	TGTACA	2 cut(s)	3442, 5687
Bsp1720I	GCTNAGC	3 cut(s)	1425, 1984, 3684
BspDI	ATCGAT	1 cut(s)	4673
BspFNI	CGCG	3 cut(s)	197, 199, 3991
BspHI	TCATGA	3 cut(s)	106, 4086, 4843
BspPI	GGATC	5 cut(s)	1159, 2991, 3959, 4669, 5630
BspT104I	TTCGAA	2 cut(s)	3166, 4912
BspT107I	GGYRCC	1 cut(s)	3745
BspTI	CTTAAG	1 cut(s)	1553
BspTNI	GGTCTC	1 cut(s)	3305
BsrDI	GCAATG	5 cut(s)	2451, 4977, 5663, 5690, 5749
BsrGI	TGTACA	2 cut(s)	3442, 5687
BsrI	ACTGG	9 cut(s)	599, 932, 973, 2541, 2773, 3860, 4555, 4634, 5250
BssNAI	GTATAC	1 cut(s)	3721
BssSI	CACGAG	2 cut(s)	558, 3701
BssT1I	CCWWGG	6 cut(s)	1110, 1441, 2625, 2979, 4642, 5408
Bst1107I	GTATAC	1 cut(s)	3721
Bst2BI	CACGAG	2 cut(s)	558, 3701
Bst2UI	CCWGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
Bst4CI	ACNGT	9 cut(s)	1819, 2025, 3769, 4220, 4539, 4574, 4693, 4952, 5031
Bst6I	CTCTTC	9 cut(s)	582, 955, 1302, 1568, 2767, 3163, 3467, 4300, 4593
BstAFI	CTTAAG	1 cut(s)	1553
BstAPI	GCANNNNNTGC	3 cut(s)	767, 2208, 4979
BstAUI	TGTACA	2 cut(s)	3442, 5687
BstBAI	YACGTR	1 cut(s)	48
BstBI	TTCGAA	2 cut(s)	3166, 4912
BstENI	CCTNNNNNAGG	1 cut(s)	3377
BstFNI	CGCG	3 cut(s)	197, 199, 3991
BstHHI	GCGC	2 cut(s)	199, 3993
BstNI	CCWGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
BstNSI	RCATGY	6 cut(s)	572, 647, 3986, 4014, 4207, 4973
BstPAI	GACNNNNGTC	1 cut(s)	999
BstSCI	CCNGG	7 cut(s)	1066, 1217, 2148, 2287, 3070, 3406, 4435
BstSFI	CTRYAG	4 cut(s)	808, 3393, 3960, 4707
BstSLI	GKGCMC	5 cut(s)	310, 1962, 3057, 4231, 5538
BstUI	CGCG	3 cut(s)	197, 199, 3991
BstV2I	GAAGAC	4 cut(s)	995, 1880, 2685, 2925
BstZ17I	GTATAC	1 cut(s)	3721
Bsu15I	ATCGAT	1 cut(s)	4673
BsuI	GTATCC	2 cut(s)	1216, 5347
BsuTUI	ATCGAT	1 cut(s)	4673
BtsI	GCAGTG	2 cut(s)	2213, 5565
CaiI	CAGNNNCTG	3 cut(s)	1454, 4218, 4950
CciI	TCATGA	3 cut(s)	106, 4086, 4843
CfoI	GCGC	2 cut(s)	199, 3993
Cfr13I	GGNCC	6 cut(s)	928, 1398, 3858, 4458, 4660, 5146
ClaI	ATCGAT	1 cut(s)	4673
CseI	GACGC	3 cut(s)	758, 1876, 2247
CspCI	CAANNNNNGTGG	2 cut(s)	2052, 2087
DraI	TTTAAA	5 cut(s)	1851, 2641, 3829, 4038, 5161
DrdI	GACNNNNNNGTC	1 cut(s)	2516
DseDI	GACNNNNNNGTC	1 cut(s)	2516
EaeI	YGGCCR	3 cut(s)	545, 5089, 5446
Eam1104I	CTCTTC	9 cut(s)	582, 955, 1302, 1568, 2767, 3163, 3467, 4300, 4593
EarI	CTCTTC	9 cut(s)	582, 955, 1302, 1568, 2767, 3163, 3467, 4300, 4593
EciI	GGCGGA	5 cut(s)	1045, 1164, 1772, 4441, 4667
Ecl136II	GAGCTC	1 cut(s)	5292
Eco130I	CCWWGG	6 cut(s)	1110, 1441, 2625, 2979, 4642, 5408
Eco24I	GRGCYC	3 cut(s)	57, 398, 5294
Eco31I	GGTCTC	1 cut(s)	3305
Eco32I	GATATC	2 cut(s)	787, 4838
Eco47I	GGWCC	4 cut(s)	1398, 3858, 4458, 5146
Eco53kI	GAGCTC	1 cut(s)	5292
Eco57I	CTGAAG	7 cut(s)	275, 1998, 2697, 5052, 5211, 5729, 5790
Eco72I	CACGTG	1 cut(s)	48
EcoICRI	GAGCTC	1 cut(s)	5292
EcoNI	CCTNNNNNAGG	1 cut(s)	3377
EcoO109I	RGGNCCY	4 cut(s)	1398, 4458, 4660, 5146
EcoRI	GAATTC	2 cut(s)	1010, 1718
EcoRII	CCWGG	7 cut(s)	1066, 1217, 2148, 2287, 3070, 3406, 4435
EcoRV	GATATC	2 cut(s)	787, 4838
EcoT14I	CCWWGG	6 cut(s)	1110, 1441, 2625, 2979, 4642, 5408
EcoT22I	ATGCAT	5 cut(s)	1345, 1972, 3984, 4619, 4975
EcoT38I	GRGCYC	3 cut(s)	57, 398, 5294
ErhI	CCWWGG	6 cut(s)	1110, 1441, 2625, 2979, 4642, 5408
Esp3I	CGTCTC	2 cut(s)	656, 5595
FalI	AAGNNNNNCTT	6 cut(s)	1065, 1097, 1547, 1579, 4239, 4271
FaqI	GGGAC	3 cut(s)	2245, 3844, 4444
FauI	CCCGC	3 cut(s)	192, 2554, 4439
FauNDI	CATATG	1 cut(s)	4054
FbaI	TGATCA	3 cut(s)	1204, 2281, 3757
FblI	GTMKAC	1 cut(s)	3720
FriOI	GRGCYC	3 cut(s)	57, 398, 5294
GlaI	GCGC	2 cut(s)	198, 3992
GsaI	CCCAGC	1 cut(s)	3294
GsuI	CTGGAG	5 cut(s)	713, 867, 2310, 4458, 4572
HapII	CCGG	1 cut(s)	5313
HgaI	GACGC	3 cut(s)	758, 1876, 2247
HhaI	GCGC	2 cut(s)	199, 3993
Hin6I	GCGC	2 cut(s)	197, 3991
HinP1I	GCGC	2 cut(s)	197, 3991
HincII	GTYRAC	5 cut(s)	664, 2080, 2509, 4471, 5818
HindII	GTYRAC	5 cut(s)	664, 2080, 2509, 4471, 5818
HindIII	AAGCTT	8 cut(s)	1260, 2049, 2445, 3893, 4032, 5165, 5223, 5414
HpaI	GTTAAC	1 cut(s)	4471
HpaII	CCGG	1 cut(s)	5313
Hpy99I	CGWCG	1 cut(s)	2106
HpyCH4III	ACNGT	9 cut(s)	1819, 2025, 3769, 4220, 4539, 4574, 4693, 4952, 5031
HpyCH4IV	ACGT	3 cut(s)	47, 412, 702
HpySE526I	ACGT	3 cut(s)	47, 412, 702
HspAI	GCGC	2 cut(s)	197, 3991
Ksp22I	TGATCA	3 cut(s)	1204, 2281, 3757
KspAI	GTTAAC	1 cut(s)	4471
MaeII	ACGT	3 cut(s)	47, 412, 702
MfeI	CAATTG	3 cut(s)	9, 582, 2909
MhlI	GDGCHC	9 cut(s)	57, 310, 398, 1962, 3057, 4231, 5294, 5538, 5678
MlsI	TGGCCA	2 cut(s)	547, 5091
MluNI	TGGCCA	2 cut(s)	547, 5091
MlyI	GAGTC	5 cut(s)	29, 599, 1554, 2544, 5616
MmeI	TCCRAC	5 cut(s)	456, 2084, 3977, 4521, 5061
Mox20I	TGGCCA	2 cut(s)	547, 5091
Mph1103I	ATGCAT	5 cut(s)	1345, 1972, 3984, 4619, 4975
MroXI	GAANNNNTTC	5 cut(s)	114, 168, 2011, 2760, 3461
MscI	TGGCCA	2 cut(s)	547, 5091
MslI	CAYNNNNRTG	8 cut(s)	382, 558, 1338, 3525, 3573, 3575, 4091, 4176
Msp20I	TGGCCA	2 cut(s)	547, 5091
MspA1I	CMGCKG	2 cut(s)	3959, 5095
MspCI	CTTAAG	1 cut(s)	1553
MspI	CCGG	1 cut(s)	5313
MspR9I	CCNGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
MunI	CAATTG	3 cut(s)	9, 582, 2909
Mva1269I	GAATGC	5 cut(s)	832, 1412, 2150, 2456, 5403
MvaI	CCWGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
MvnI	CGCG	3 cut(s)	197, 199, 3991
NdeI	CATATG	1 cut(s)	4054
NmuCI	GTSAC	5 cut(s)	1619, 2407, 2518, 4100, 4804
NsiI	ATGCAT	5 cut(s)	1345, 1972, 3984, 4619, 4975
NspI	RCATGY	6 cut(s)	572, 647, 3986, 4014, 4207, 4973
NspV	TTCGAA	2 cut(s)	3166, 4912
PaeI	GCATGC	2 cut(s)	3986, 4973
PagI	TCATGA	3 cut(s)	106, 4086, 4843
PasI	CCCWGGG	1 cut(s)	1218
PciI	ACATGT	2 cut(s)	643, 4010
PctI	GAATGC	5 cut(s)	832, 1412, 2150, 2456, 5403
PdmI	GAANNNNTTC	5 cut(s)	114, 168, 2011, 2760, 3461
PflFI	GACNNNGTC	1 cut(s)	5606
PflMI	CCANNNNNTGG	2 cut(s)	730, 4983
PfoI	TCCNGGA	1 cut(s)	4435
PleI	GAGTC	5 cut(s)	29, 598, 1554, 2544, 5615
PmaCI	CACGTG	1 cut(s)	48
PmlI	CACGTG	1 cut(s)	48
PpsI	GAGTC	5 cut(s)	29, 598, 1554, 2544, 5615
Ppu21I	YACGTR	1 cut(s)	48
PpuMI	RGGWCCY	3 cut(s)	1398, 4458, 5146
PscI	ACATGT	2 cut(s)	643, 4010
PshAI	GACNNNNGTC	1 cut(s)	999
PshBI	ATTAAT	1 cut(s)	860
Psp124BI	GAGCTC	1 cut(s)	5294
Psp5II	RGGWCCY	3 cut(s)	1398, 4458, 5146
Psp6I	CCWGG	7 cut(s)	1066, 1217, 2148, 2287, 3070, 3406, 4435
PspCI	CACGTG	1 cut(s)	48
PspFI	CCCAGC	1 cut(s)	3290
PspGI	CCWGG	7 cut(s)	1066, 1217, 2148, 2287, 3070, 3406, 4435
PspPI	GGNCC	6 cut(s)	928, 1398, 3858, 4458, 4660, 5146
PspPPI	RGGWCCY	3 cut(s)	1398, 4458, 5146
PsrI	GAACNNNNNNTAC	2 cut(s)	4193, 4225
PstNI	CAGNNNCTG	3 cut(s)	1454, 4218, 4950
PsyI	GACNNNGTC	1 cut(s)	5606
PvuII	CAGCTG	2 cut(s)	3959, 5095
RseI	CAYNNNNRTG	8 cut(s)	382, 558, 1338, 3525, 3573, 3575, 4091, 4176
SacI	GAGCTC	1 cut(s)	5294
Sau96I	GGNCC	6 cut(s)	928, 1398, 3858, 4458, 4660, 5146
ScaI	AGTACT	2 cut(s)	1036, 3174
SchI	GAGTC	5 cut(s)	29, 599, 1554, 2544, 5616
ScrFI	CCNGG	7 cut(s)	1068, 1219, 2150, 2289, 3072, 3408, 4437
SduI	GDGCHC	9 cut(s)	57, 310, 398, 1962, 3057, 4231, 5294, 5538, 5678
SfcI	CTRYAG	4 cut(s)	808, 3393, 3960, 4707
SfuI	TTCGAA	2 cut(s)	3166, 4912
SinI	GGWCC	4 cut(s)	1398, 3858, 4458, 5146
SmiMI	CAYNNNNRTG	8 cut(s)	382, 558, 1338, 3525, 3573, 3575, 4091, 4176
SmlI	CTYRAG	8 cut(s)	681, 1553, 2502, 2957, 3308, 4463, 5168, 5293
SmoI	CTYRAG	8 cut(s)	681, 1553, 2502, 2957, 3308, 4463, 5168, 5293
SpeI	ACTAGT	1 cut(s)	3154
SphI	GCATGC	2 cut(s)	3986, 4973
SspI	AATATT	1 cut(s)	3016
SstI	GAGCTC	1 cut(s)	5294
StyD4I	CCNGG	7 cut(s)	1066, 1217, 2148, 2287, 3070, 3406, 4435
StyI	CCWWGG	6 cut(s)	1110, 1441, 2625, 2979, 4642, 5408
TaaI	ACNGT	9 cut(s)	1819, 2025, 3769, 4220, 4539, 4574, 4693, 4952, 5031
TaiI	ACGT	3 cut(s)	50, 415, 705
TaqII	GACCGA	2 cut(s)	4359, 4581
TatI	WGTACW	7 cut(s)	1034, 3114, 3172, 3442, 4406, 4562, 5687
TseFI	GTSAC	5 cut(s)	1619, 2407, 2518, 4100, 4804
Tsp45I	GTSAC	5 cut(s)	1619, 2407, 2518, 4100, 4804
TspGWI	ACGGA	4 cut(s)	638, 786, 5390, 5619
Tth111I	GACNNNGTC	1 cut(s)	5606
Van91I	CCANNNNNTGG	2 cut(s)	730, 4983
Vha464I	CTTAAG	1 cut(s)	1553
VneI	GTGCAC	1 cut(s)	3053
VpaK11BI	GGWCC	4 cut(s)	1398, 3858, 4458, 5146
VspI	ATTAAT	1 cut(s)	860
XagI	CCTNNNNNAGG	1 cut(s)	3377
XbaI	TCTAGA	5 cut(s)	1006, 1129, 2848, 4027, 4487
XceI	RCATGY	6 cut(s)	572, 647, 3986, 4014, 4207, 4973
XmiI	GTMKAC	1 cut(s)	3720
XmnI	GAANNNNTTC	5 cut(s)	114, 168, 2011, 2760, 3461
ZrmI	AGTACT	2 cut(s)	1036, 3174
Zsp2I	ATGCAT	5 cut(s)	1345, 1972, 3984, 4619, 4975

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.