RchiOBHm_Chr6g0306811

Calcineurin-binding protein

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Forward (+)
65347199 .. 65357231
10033 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ27583

Sequence Viewer

Length: 5979 bp
ATGTTCTCAATTGCAGCTATCAATGACGATACTGACTCCAAAGGCACGTGGGAGCCCTTAGCTCCTACCAAAGAAGCTCAGGCATGCCTCTCCATCCCCTCTCTCTCAGAATTTCATCTCTCACAAACTTATCATGAAGGACTTCACAAGTTACAAACTAAAGAATACAAGAGGGCTAGTGAGTTGTTAGAGTCTGTTCTAAAAGACCCTTTAATAGAAAACGCGCGGGTGGATGGTAATGTCAGCGATTGTCATCTATTGCAACTCAGATTTTTGGCACTGAAGAACCTTGCCAATGTTTTTCTTCAACAAGGTTCAGAACATTATGAGAGTGCTCTACGATGTTATCTCCAAGCTGTAGAGATTGATACCAAAGATTCTGTTGTCTGGAACCAGCTAGGAACATTATCATGCTCGATGGGCTCTCTGAGTATATCACGTTGGGCATTTGAGCAAGGGCTTTTGTGCAGCCCTAATAATTGGAACTGCATGGAGAAATTGTTGGAAGTTCTTATTGCTATCGGTGATGAGGTTGCATGCCTTTCTGTGGCAGAGTTAATTTTGAGGCATTGGCCGTCACATTCTCGTGCTTTGCATGTCAAGAAAACAATTGAAGAGTCAGAGCCGGTTCCATTTGCTCCGAGAGGTATAGATAAGCTGGAACCTAAACATGTCCGTCTCAAATTTGTTGACAAGAGAAAAGCATCTCAAGCACTTCTGGAGGAGGACGTTGCATCCAAGAAGCTGAACCAGAGCATGGATTTGAACCTTGCAGACGCTACTTGGGCAGCTGTTGCTGATGCACTCTTGGATATCTTACTTCCGTTGAATGGCTGTAGATCTGAGATGGGGAATGCAAAAGAATACAGATCTGGAGACATCAGATTAATTTTACACTTACCTTCTAGTTCAGAAGGTAACAGAGGGTCTGAGGAAAGAAAAGGACATAACTTGGCCCCAATTCGTGAAAATACCTCTTCCGGTGATTGCAACACTGGAAGAACAGGTGTTAAAGAGAAAGACACAAGTCTTCTAGAATTCCAAAAACAGGAGAGGCGGAGTACTCGCCTTGAAAGGCTTAGAACTCGTAAACCAGGGAAAGAAGATCTTGACTTTGCTAATGGTAAAGCTCAGGCCAAGGTTGTTATTCAGTGTCTAGAACCTTTTATTGCTGGCGGATCAGGAATCAAAGATTCCAATCATTCTAGTAATCATTCTGTTTCATGTCCTGATCAAGCTAATCCCTGGGATACTGAATATGGTGATGTTTGCAGATTTGTTGAAAAAGCTTCAAAGAACTACGGTGCTTTCCATTTGGCTCACTTGCTTTTGGAAGAGGTTGCAAGTAGAGATCTTCAGCATCAGGATGCATTTGTTAAGTTTCTGGACTTGGAAAAGATGACAAGGAATTGGGGGAAGGATAGGACCCCTGAATGCTGCCTTTTCCTGGCTGAGCTTTATTATGACCTTGGTTCATTGTCTGATGCTTCAAGGTTGTCAGTATTCATGTCCGAGGCATCTTATCATCTTTGTAAGATTCTCGAATCAGTAGCTTTGGAAGATGAAAGCATCTCTGGGCTTAAGAGAATCTTCGGTAATAATGGAATATCAGCCAACAATTCTGTTTGCAAGGATGTATCATTAGGTGACAAGTTGTTAGCAAGTAGCTCCTTTTGGGTTCGGTTTTTCTGGTTAAGTGGACGATTATCTATTTTAGACGGCAACAAGGAAAAAGCCCACCAAGAATTCTGTATATCCTTGTCACTTTTGGCAAACAAGGAAAATATCAGTGATTCGCAGCGTGTAATCCGCCTCCCATATTGCAAGGTTCTTAAAGAGTTAACTGTTGGTAGGATTCTCCATGAAATTAACATTTTAAAGGTTGATTTCTTGACGCAGAAGACTTTAAGTGAGATGATTGAGAAGGAAATGTATATGGAGTGCATGACCTTGCTTGTTCCGCTTCTATTTGCCACAAGAAATGTGCCCCCTGATGCATTACCTCTACGCTTAGCTAATAAAGGAGGCGAAGGAGTTACTTCAGTTGAACTGTCAGCACTAGACATTTTAATCAAAGCTTGTGAAAAGACAAAACCTGTGGATGTTGACATTTATTTGAATTGTCATCGTCGGAAACTGCAAATTCTTATGGCAGCAGCAGGGATTGATGAATGCCTGGCTTCCTGTAAATCCTTCCTTTCTAAATCAGGGTCAAAAGCTCGCTTCCATTCTGTCATAGATTCAAATGAAAGTTCGAGCAAGCAGTGCTGGAATTTCTTGGTTGCAGAGGAAGTAAAGGCCATTTCTCAATGTGCGTCCCAAGTGAAGAATTTTATTGATCAACCTGGAGCTTCTGACAGCAATTCTGTTCCAATGAGCAGCATAGGTGATCTCCAATGCTTGCTCTTGTCAGTCATGTGTAATGTTGCAAGCATATTCCTCTGTAAGAAATCTACTGAGCTAGTGACGGCTGATGAAATTGAACAAAGTTGCTTTATTGAAGCTTCCATTGCATTCTGCAAACTTCAACACCTCAACCACATGATACCTGTTAAAACTCAAGTTGACTTAATTGTCACTATGCACGATCTACTGGCGGAATATGGACTCTGCTGTGCGGGTCAGGGTACTGAAAAGGAGGAAGGAATGTTTCTTAAATTTGCAATTAAGCATCTATTGGCCTTGGATATGAAGTTTAAATCTACCTTTAACTCATCAAGCAAAGAAACAACTGAAGACAACGAGCTGCTTGACCTAAATAGTCCTGCCAAAATAACTCTAAATGAATCAAAATCAGATACACTAGATGTGGAAATGGTTCACACTGGAAGAGATGAAATCAGTACTGCAGGGAAGGATGTATCAGAAGCAATATCATCAAAAAACATTTTATCTGATAAAGCTCTAGAGGAAGATCTTAATTTGGAATCAGAAGGTAGAAAGCAAGATGAAGATGGTTCTGGTGCTAAGTTCAACAGAGGTGAAGAAGCAAGCGATCAATTGAATGAAGATGAAGATGAACTCATAGAAGATGAAAGGGAGGAGCTTGAGTTGAAAATTGATTATGCCTTGGATCAGTGTTTCTTCTGCTTATATGGTCTAAATATTAGATCTGATTCATCCTATGAAGATGACTTAGCTGTGCACAAAAATACTAGCCCTGGTGATTACCAGACAAAGGAACAATGTGCTGATGTTTTTCAGTACATACTTCCTTATGCAAAGGCTTCTTCTAGGACAGGACTAGTCAAAGTTCGAAGAGTACTCAGAGCCATACGCAAACACTTTCCACAACCACCAGAAGATGTTTTGGCTGGAAATGCAATAGATAAGTTCTTAGATGATCTCAATTTATGTGAAGATAAGCTCTCAGATGAGGCTGGGTCTGACGGCTTTCTTGAGACCATAACGAAGGTGATACTTCCTGATGAGAGAAGGTTTAAACAACAAAAGTCATCATCCGTTGGGAGCTCTGAACCATATCTGGATGTCTATTGCAATTTATATTATTTCCTTGCCCTCTCTGAGGAAATGAGTGCTACAGACAAGTGGCCTGGCTTTGTGCTTACAAAGGAAGGGGAAGAATTTGTACAGCATAATGCGAATCTCTTCAAATATGATTTACTCTATAACCCTCTGCGTTTTGAAAGTTGGCAAAGACTAGGACATATCTATGACGAGGAAGTGGACTTGTTACTAAATGATGGCAGTAAACACATCAATGTGGCAGGATGGAGGAAGAATGTTACATTACCTCAGAGGGTTGAGACAAGTCGAAGGAGGAGTAGGCGGTGTCTGTTAATGAGTTTGGCTTTGGCAAAGACATCAGCTCAGCAGAGTGAGATACACGAGTTATTGGCATTGGTATACTATGATAGCCTTCAAAGCGTGGTGCCATTTTATGATCAACGAACTGTTGTACCCTTGAAGGATGCAGCATGGGTGGTGTTTTGCGAGAACTCGATGAGACACTTTAAAAAGGCTTTTGCTCACAAGCAAGACTGGTCCCATGCTTACTATATTGGGAAGCTCTGTGAAAAGCTTGGGTACTCCTATGAGACATCTTTATCATATTATGATAAAGCTATTGCTCTGAATCCAACAGCTGTAGATCCTGTTTACAGGATGCATGCTTCGCGCCTGAAATTACTTTTTACATGTGGAAAACAAAATCTAGAAGCTTTAAAGGTTCTTTCAGCATATGCCTTTAGTCAATCAACGAAGGATGCTGTCATGACAATGTTAGGTGACATGGATGCGGAAATGTCAAATTCACCAAAGGATAGAAGCACAGAAACAAACTCTGAGAAGGTGAAGCATGAAGATGCGGTTAAATCAAAGGTGTGGAACATGCTTTACAGCGACTGTCTTTGTGCCCTTGAAACTTGTATTGAAGGGGAGCTTAAACATTTTCATAAAGCCAGATATATGCTTGCACAAGGTCTGCATCGAAGAGGGGAAAGTGGTGCATCTGAGAGAGCAAAAGATGAACTCTCTTTTTGCTTCAAGTCATCTCGGTCATCATTTACAATAAATATGTGGGAAATTGATAGTACAGCCAAAAAAGGAAGGCGGAAAACTCCTGGAGTTTGCGGGAGCAAAAGGTCCCTTGAGGTTAACTTACCTGAAAGTTCTAGAAAATTCATCACTTGCATTAGGAAATATCTTCTGTTCTATTTGAAACTGTTGGAGGAGACTGGAGACATCTGTACTCTTGACCGTGCTTATATCTCTCTTCGGTCTGATAAGAGGTTTTCACTATGCATTGAAGATCTTGTTCCAGTTGCCCTTGGGAGGTATGTAAAGGCCCTTGTTTTATCAATCCGCCAAGTTGAAACTGTTGGCTCTGGTGCTGTAGATAATTCCGAGCATATATTGGAGAAAGTGTTTTCTTTGTTCATGGAACAGGGGAACTTATGGCCTGAAATATGTGGTTTGCCTGAGATTAAGGTCACAGAAACATCAGAAAGCAGTTTATATGGATATCTTCATGAACATATCATATCATTAGAGGAAAATGGTAAATTGGACACTCTTGAAGCCATAAATGAGAAGATTCGAAAGCGTTTCAAGAATCCAAAATTGTCAAACAGCAACTGTGCGAAAGTTTGCAGGCATGCATCCATTGCTTGGTGTAGATCTCTTATATTGTGGTTGGCACAGATCACTCCTTCACAGTCTGAAATCGCAAGTGAGATTCAGGTTCTAAATCCTTCAGATGGTGGGTTGGAAAATAGCCAGCTGCTCTGTGTTGATTTGCAGACAGATGAATTGTGGAGTTCAGCTTTTGAGGACCCAACCCATTTTAAAAAGCTTGAGGCAAAACGAAATCCTGTTTTCTCTAAAATAAAGAACTTAGTTGTTAAGAAAGCTTCAGATGAAAATTTAGAGACTGCCAGTGCTTTGCTTCGATCTTCGTACAACTTCTATCGTGAGAGCTCAAGTGTAATGCCTTCATCCGGTGTCAATCTGTATTTAGTTTCATCATGGTTAGCAAGGGATACACAATTCAGACCAAGCACGGAGGGGGCTGAAATCCTTGACCTTAGCATTCCAAGGAAGCTTCTCTTGTGGGCTTACACACTATTGCATGGCCGTTACACAAACATCTCTTTTGTTGTAAAGCATTGTGAAGAAAATGCAAGGTCTAAAATGAAAAAAGGAGCAGGAACCTCAACTGTGCCCTCAAACACAAGCATAGCAAACACCACCACTGCTCACACAGCTACAGCATCGGTAGCAGCTTGTGGCAGAGACGGAATCGGACATAGTGGAACCGGCGACACAGATCCAGCAAACGCAGTAGTATCTACCTCATTGCCTGAGAGCACAACGCAATGTACAAATCAACCACCTTCTGACATGTACCAGACGAGTTCATTTGCTGCTCCCCCACTTCAGCATTGCAACAACCCCGTTACAGAGAGGAGCAATACAACAGCAGCAGATGAAGGAGCTCCAGACAAAGTTGACATATAA

Protein Analysis

1992

Amino Acids

222.86

Weight (kDa)

5.7

Isoelectric Point (pI)

49.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0010312)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2573
AccB1I GGYRCC 1 cut(s) 3892
AccB7I CCANNNNNTGG 2 cut(s) 757, 5130
AccI GTMKAC 1 cut(s) 3867
AccII CGCG 3 cut(s) 224, 226, 4138
AclWI GGATC 4 cut(s) 1186, 3081, 4106, 5783
AcoI YGGCCR 2 cut(s) 572, 5593
AcuI CTGAAG 7 cut(s) 302, 1340, 2025, 2754, 5199, 5358, 5882
AcvI CACGTG 1 cut(s) 48
AflII CTTAAG 1 cut(s) 1580
AflIII ACRYGT 3 cut(s) 670, 4157, 5862
AhlI ACTAGT 1 cut(s) 3244
AjnI CCWGG 8 cut(s) 1093, 1244, 1446, 2175, 2344, 3160, 3553, 4582
Alw21I GWGCWC 6 cut(s) 337, 3147, 3473, 5441, 5831, 5959
Alw44I GTGCAC 1 cut(s) 3143
AlwI GGATC 4 cut(s) 1186, 3081, 4106, 5783
AlwNI CAGNNNCTG 2 cut(s) 4365, 5097
AoxI GGCC 9 cut(s) 572, 954, 1134, 2298, 2679, 3551, 4806, 4919, 5593
ApaLI GTGCAC 1 cut(s) 3143
AseI ATTAAT 1 cut(s) 887
Asp700I GAANNNNTTC 3 cut(s) 141, 2817, 3608
AspLEI GCGC 2 cut(s) 226, 4140
AspS9I GGNCC 6 cut(s) 955, 1425, 4005, 4605, 4807, 5293
AsuII TTCGAA 2 cut(s) 3256, 5059
AvaII GGWCC 4 cut(s) 1425, 4005, 4605, 5293
BaeGI GKGCMC 4 cut(s) 1989, 3147, 4378, 5685
BaeI ACNNNNGTAYC 4 cut(s) 3836, 3869, 3903, 3936
BanI GGYRCC 1 cut(s) 3892
BanII GRGCYC 5 cut(s) 57, 425, 3473, 5441, 5959
BarI GAAGNNNNNNTAC 2 cut(s) 3573, 3605
BauI CACGAG 2 cut(s) 585, 3848
BbrPI CACGTG 1 cut(s) 48
BbsI GAAGAC 3 cut(s) 1022, 1907, 2742
Bbv12I GWGCWC 6 cut(s) 337, 3147, 3473, 5441, 5831, 5959
BccI CCATC 8 cut(s) 101, 227, 412, 841, 2948, 3698, 3726, 5213
BceAI ACGGC 5 cut(s) 559, 1735, 2484, 3406, 5580
BciT130I CCWGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
BciVI GTATCC 2 cut(s) 1243, 5494
BclI TGATCA 3 cut(s) 1231, 2338, 3904
BcuI ACTAGT 1 cut(s) 3244
BfmI CTRYAG 7 cut(s) 357, 835, 2847, 3540, 4107, 4854, 5727
BfrI CTTAAG 1 cut(s) 1580
BfuI GTATCC 2 cut(s) 1243, 5494
BglII AGATCT 8 cut(s) 839, 869, 1105, 1351, 2914, 3110, 4771, 5138
BlpI GCTNAGC 3 cut(s) 1452, 2011, 3831
BmcAI AGTACT 3 cut(s) 1063, 2845, 3264
Bme1390I CCNGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
Bme18I GGWCC 4 cut(s) 1425, 4005, 4605, 5293
BmgT120I GGNCC 6 cut(s) 955, 1425, 4005, 4605, 4807, 5293
BmrFI CCNGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
BoxI GACNNNNGTC 1 cut(s) 1026
BpiI GAAGAC 3 cut(s) 1022, 1907, 2742
BpmI CTGGAG 6 cut(s) 740, 894, 2367, 4605, 4719, 5943
Bpu10I CCTNAGC 4 cut(s) 58, 78, 1131, 5546
Bpu1102I GCTNAGC 3 cut(s) 1452, 2011, 3831
Bpu14I TTCGAA 2 cut(s) 3256, 5059
BpuEI CTTGAG 7 cut(s) 693, 2544, 3068, 3419, 4631, 5336, 5425
BsaAI YACGTR 1 cut(s) 48
BsaBI GATNNNNATC 2 cut(s) 252, 1197
BsaI GGTCTC 1 cut(s) 3395
BsaWI WCCGGW 2 cut(s) 980, 5459
BsaXI ACNNNNNCTCC 6 cut(s) 485, 515, 3035, 3065, 4871, 4901
Bse118I RCCGGY 2 cut(s) 625, 5777
Bse1I ACTGG 7 cut(s) 1000, 2598, 2830, 4007, 4702, 4781, 5397
Bse3DI GCAATG 5 cut(s) 2508, 5124, 5816, 5843, 5902
Bse8I GATNNNNATC 2 cut(s) 252, 1197
BseBI CCWGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
BseJI GATNNNNATC 2 cut(s) 252, 1197
BseMI GCAATG 5 cut(s) 2508, 5124, 5816, 5843, 5902
BseNI ACTGG 7 cut(s) 1000, 2598, 2830, 4007, 4702, 4781, 5397
BseRI GAGGAG 5 cut(s) 737, 3056, 3796, 4706, 5941
BseSI GKGCMC 4 cut(s) 1989, 3147, 4378, 5685
BseYI CCCAGC 1 cut(s) 3380
BsgI GTGCAG 1 cut(s) 487
Bsh1236I CGCG 3 cut(s) 224, 226, 4138
BshFI GGCC 9 cut(s) 574, 956, 1136, 2300, 2681, 3553, 4808, 4921, 5595
BshNI GGYRCC 1 cut(s) 3892
BsiHKAI GWGCWC 6 cut(s) 337, 3147, 3473, 5441, 5831, 5959
BsiSI CCGG 4 cut(s) 626, 981, 5460, 5778
BslFI GGGAC 3 cut(s) 2302, 3991, 4591
BsmBI CGTCTC 2 cut(s) 683, 5748
BsmFI GGGAC 3 cut(s) 2302, 3991, 4591
BsmI GAATGC 5 cut(s) 859, 1439, 2177, 2513, 5550
BsnI GGCC 9 cut(s) 574, 956, 1136, 2300, 2681, 3553, 4808, 4921, 5595
Bso31I GGTCTC 1 cut(s) 3395
Bsp119I TTCGAA 2 cut(s) 3256, 5059
Bsp1407I TGTACA 2 cut(s) 3589, 5840
Bsp1720I GCTNAGC 3 cut(s) 1452, 2011, 3831
BspANI GGCC 9 cut(s) 574, 956, 1136, 2300, 2681, 3553, 4808, 4921, 5595
BspFNI CGCG 3 cut(s) 224, 226, 4138
BspHI TCATGA 3 cut(s) 133, 4233, 4990
BspMAI CTGCAG 1 cut(s) 2851
BspPI GGATC 4 cut(s) 1186, 3081, 4106, 5783
BspT104I TTCGAA 2 cut(s) 3256, 5059
BspT107I GGYRCC 1 cut(s) 3892
BspTI CTTAAG 1 cut(s) 1580
BspTNI GGTCTC 1 cut(s) 3395
BsrDI GCAATG 5 cut(s) 2508, 5124, 5816, 5843, 5902
BsrFI RCCGGY 2 cut(s) 625, 5777
BsrGI TGTACA 2 cut(s) 3589, 5840
BsrI ACTGG 7 cut(s) 1000, 2598, 2830, 4007, 4702, 4781, 5397
BssAI RCCGGY 2 cut(s) 625, 5777
BssNAI GTATAC 1 cut(s) 3868
BssSI CACGAG 2 cut(s) 585, 3848
BssT1I CCWWGG 6 cut(s) 1137, 1468, 2682, 3069, 4789, 5555
Bst1107I GTATAC 1 cut(s) 3868
Bst2BI CACGAG 2 cut(s) 585, 3848
Bst2UI CCWGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
Bst6I CTCTTC 8 cut(s) 609, 982, 1329, 2824, 3253, 3614, 4447, 4740
BstAFI CTTAAG 1 cut(s) 1580
BstAPI GCANNNNNTGC 3 cut(s) 794, 2265, 5126
BstAUI TGTACA 2 cut(s) 3589, 5840
BstBAI YACGTR 1 cut(s) 48
BstBI TTCGAA 2 cut(s) 3256, 5059
BstENI CCTNNNNNAGG 1 cut(s) 3524
BstFNI CGCG 3 cut(s) 224, 226, 4138
BstHHI GCGC 2 cut(s) 226, 4140
BstNI CCWGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
BstNSI RCATGY 9 cut(s) 87, 540, 599, 674, 4133, 4161, 4354, 5120, 5866
BstPAI GACNNNNGTC 1 cut(s) 1026
BstSCI CCNGG 8 cut(s) 1093, 1244, 1446, 2175, 2344, 3160, 3553, 4582
BstSFI CTRYAG 7 cut(s) 357, 835, 2847, 3540, 4107, 4854, 5727
BstSLI GKGCMC 4 cut(s) 1989, 3147, 4378, 5685
BstUI CGCG 3 cut(s) 224, 226, 4138
BstV2I GAAGAC 3 cut(s) 1022, 1907, 2742
BstZ17I GTATAC 1 cut(s) 3868
BsuI GTATCC 2 cut(s) 1243, 5494
BsuRI GGCC 9 cut(s) 574, 956, 1136, 2300, 2681, 3553, 4808, 4921, 5595
BtsI GCAGTG 2 cut(s) 2270, 5712
BtsIMutI CAGTG 9 cut(s) 278, 993, 1157, 1795, 2270, 2823, 3083, 5404, 5712
CaiI CAGNNNCTG 2 cut(s) 4365, 5097
CciI TCATGA 3 cut(s) 133, 4233, 4990
CfoI GCGC 2 cut(s) 226, 4140
Cfr10I RCCGGY 2 cut(s) 625, 5777
Cfr13I GGNCC 6 cut(s) 955, 1425, 4005, 4605, 4807, 5293
CseI GACGC 3 cut(s) 785, 1903, 2304
CspCI CAANNNNNGTGG 2 cut(s) 2079, 2114
DraI TTTAAA 6 cut(s) 1878, 2698, 3442, 3976, 4185, 5308
DrdI GACNNNNNNGTC 1 cut(s) 2573
DseDI GACNNNNNNGTC 1 cut(s) 2573
EaeI YGGCCR 2 cut(s) 572, 5593
Eam1104I CTCTTC 8 cut(s) 609, 982, 1329, 2824, 3253, 3614, 4447, 4740
EarI CTCTTC 8 cut(s) 609, 982, 1329, 2824, 3253, 3614, 4447, 4740
EciI GGCGGA 6 cut(s) 1072, 1191, 1799, 2612, 4588, 4814
Ecl136II GAGCTC 3 cut(s) 3471, 5439, 5957
Eco130I CCWWGG 6 cut(s) 1137, 1468, 2682, 3069, 4789, 5555
Eco24I GRGCYC 5 cut(s) 57, 425, 3473, 5441, 5959
Eco31I GGTCTC 1 cut(s) 3395
Eco32I GATATC 2 cut(s) 814, 4985
Eco47I GGWCC 4 cut(s) 1425, 4005, 4605, 5293
Eco53kI GAGCTC 3 cut(s) 3471, 5439, 5957
Eco57I CTGAAG 7 cut(s) 302, 1340, 2025, 2754, 5199, 5358, 5882
Eco72I CACGTG 1 cut(s) 48
EcoICRI GAGCTC 3 cut(s) 3471, 5439, 5957
EcoNI CCTNNNNNAGG 1 cut(s) 3524
EcoO109I RGGNCCY 4 cut(s) 1425, 4605, 4807, 5293
EcoRI GAATTC 2 cut(s) 1037, 1745
EcoRII CCWGG 8 cut(s) 1093, 1244, 1446, 2175, 2344, 3160, 3553, 4582
EcoRV GATATC 2 cut(s) 814, 4985
EcoT14I CCWWGG 6 cut(s) 1137, 1468, 2682, 3069, 4789, 5555
EcoT22I ATGCAT 5 cut(s) 1372, 1999, 4131, 4766, 5122
EcoT38I GRGCYC 5 cut(s) 57, 425, 3473, 5441, 5959
ErhI CCWWGG 6 cut(s) 1137, 1468, 2682, 3069, 4789, 5555
Esp3I CGTCTC 2 cut(s) 683, 5748
FalI AAGNNNNNCTT 8 cut(s) 1092, 1124, 1574, 1606, 4386, 4418, 5552, 5584
FaqI GGGAC 3 cut(s) 2302, 3991, 4591
FauI CCCGC 3 cut(s) 219, 2611, 4586
FauNDI CATATG 1 cut(s) 4201
FbaI TGATCA 3 cut(s) 1231, 2338, 3904
FblI GTMKAC 1 cut(s) 3867
FriOI GRGCYC 5 cut(s) 57, 425, 3473, 5441, 5959
GlaI GCGC 2 cut(s) 225, 4139
GsaI CCCAGC 1 cut(s) 3384
GsuI CTGGAG 6 cut(s) 740, 894, 2367, 4605, 4719, 5943
HaeIII GGCC 9 cut(s) 574, 956, 1136, 2300, 2681, 3553, 4808, 4921, 5595
HapII CCGG 4 cut(s) 626, 981, 5460, 5778
HgaI GACGC 3 cut(s) 785, 1903, 2304
HhaI GCGC 2 cut(s) 226, 4140
Hin6I GCGC 2 cut(s) 224, 4138
HinP1I GCGC 2 cut(s) 224, 4138
HincII GTYRAC 6 cut(s) 691, 1842, 2107, 2566, 4618, 5971
HindII GTYRAC 6 cut(s) 691, 1842, 2107, 2566, 4618, 5971
HindIII AAGCTT 8 cut(s) 1287, 2076, 2502, 4040, 4179, 5312, 5370, 5561
HpaI GTTAAC 2 cut(s) 1842, 4618
HpaII CCGG 4 cut(s) 626, 981, 5460, 5778
Hpy99I CGWCG 1 cut(s) 2133
HpyCH4IV ACGT 3 cut(s) 47, 439, 729
HpySE526I ACGT 3 cut(s) 47, 439, 729
HspAI GCGC 2 cut(s) 224, 4138
Ksp22I TGATCA 3 cut(s) 1231, 2338, 3904
KspAI GTTAAC 2 cut(s) 1842, 4618
MaeII ACGT 3 cut(s) 47, 439, 729
MfeI CAATTG 3 cut(s) 9, 609, 2999
MlyI GAGTC 4 cut(s) 29, 200, 626, 2601
MmeI TCCRAC 5 cut(s) 483, 2111, 4124, 4668, 5208
Mph1103I ATGCAT 5 cut(s) 1372, 1999, 4131, 4766, 5122
MroXI GAANNNNTTC 3 cut(s) 141, 2817, 3608
MslI CAYNNNNRTG 8 cut(s) 409, 585, 1365, 3672, 3720, 3722, 4238, 4323
MspA1I CMGCKG 3 cut(s) 791, 4106, 5242
MspCI CTTAAG 1 cut(s) 1580
MspI CCGG 4 cut(s) 626, 981, 5460, 5778
MspR9I CCNGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
MssI GTTTAAAC 1 cut(s) 3442
MunI CAATTG 3 cut(s) 9, 609, 2999
Mva1269I GAATGC 5 cut(s) 859, 1439, 2177, 2513, 5550
MvaI CCWGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
MvnI CGCG 3 cut(s) 224, 226, 4138
NdeI CATATG 1 cut(s) 4201
NmuCI GTSAC 7 cut(s) 576, 1646, 1761, 2464, 2575, 4247, 4951
NsiI ATGCAT 5 cut(s) 1372, 1999, 4131, 4766, 5122
NspI RCATGY 9 cut(s) 87, 540, 599, 674, 4133, 4161, 4354, 5120, 5866
NspV TTCGAA 2 cut(s) 3256, 5059
PaeI GCATGC 4 cut(s) 87, 540, 4133, 5120
PagI TCATGA 3 cut(s) 133, 4233, 4990
PasI CCCWGGG 1 cut(s) 1245
PciI ACATGT 3 cut(s) 670, 4157, 5862
PctI GAATGC 5 cut(s) 859, 1439, 2177, 2513, 5550
PdmI GAANNNNTTC 3 cut(s) 141, 2817, 3608
PflMI CCANNNNNTGG 2 cut(s) 757, 5130
PfoI TCCNGGA 1 cut(s) 4582
PleI GAGTC 4 cut(s) 29, 199, 625, 2601
PmaCI CACGTG 1 cut(s) 48
PmeI GTTTAAAC 1 cut(s) 3442
PmlI CACGTG 1 cut(s) 48
PpsI GAGTC 4 cut(s) 29, 199, 625, 2601
Ppu21I YACGTR 1 cut(s) 48
PpuMI RGGWCCY 3 cut(s) 1425, 4605, 5293
PscI ACATGT 3 cut(s) 670, 4157, 5862
PshAI GACNNNNGTC 1 cut(s) 1026
PshBI ATTAAT 1 cut(s) 887
Psp124BI GAGCTC 3 cut(s) 3473, 5441, 5959
Psp5II RGGWCCY 3 cut(s) 1425, 4605, 5293
Psp6I CCWGG 8 cut(s) 1093, 1244, 1446, 2175, 2344, 3160, 3553, 4582
PspCI CACGTG 1 cut(s) 48
PspFI CCCAGC 1 cut(s) 3380
PspGI CCWGG 8 cut(s) 1093, 1244, 1446, 2175, 2344, 3160, 3553, 4582
PspPI GGNCC 6 cut(s) 955, 1425, 4005, 4605, 4807, 5293
PspPPI RGGWCCY 3 cut(s) 1425, 4605, 5293
PsrI GAACNNNNNNTAC 2 cut(s) 4340, 4372
PstI CTGCAG 1 cut(s) 2851
PstNI CAGNNNCTG 2 cut(s) 4365, 5097
PvuII CAGCTG 3 cut(s) 791, 4106, 5242
RseI CAYNNNNRTG 8 cut(s) 409, 585, 1365, 3672, 3720, 3722, 4238, 4323
SacI GAGCTC 3 cut(s) 3473, 5441, 5959
Sau96I GGNCC 6 cut(s) 955, 1425, 4005, 4605, 4807, 5293
ScaI AGTACT 3 cut(s) 1063, 2845, 3264
SchI GAGTC 4 cut(s) 29, 200, 626, 2601
ScrFI CCNGG 8 cut(s) 1095, 1246, 1448, 2177, 2346, 3162, 3555, 4584
SfcI CTRYAG 7 cut(s) 357, 835, 2847, 3540, 4107, 4854, 5727
SfuI TTCGAA 2 cut(s) 3256, 5059
SinI GGWCC 4 cut(s) 1425, 4005, 4605, 5293
SmiMI CAYNNNNRTG 8 cut(s) 409, 585, 1365, 3672, 3720, 3722, 4238, 4323
SmlI CTYRAG 8 cut(s) 708, 1580, 2559, 3047, 3398, 4610, 5315, 5440
SmoI CTYRAG 8 cut(s) 708, 1580, 2559, 3047, 3398, 4610, 5315, 5440
SpeI ACTAGT 1 cut(s) 3244
SphI GCATGC 4 cut(s) 87, 540, 4133, 5120
SspI AATATT 1 cut(s) 3106
SstI GAGCTC 3 cut(s) 3473, 5441, 5959
StyD4I CCNGG 8 cut(s) 1093, 1244, 1446, 2175, 2344, 3160, 3553, 4582
StyI CCWWGG 6 cut(s) 1137, 1468, 2682, 3069, 4789, 5555
TaiI ACGT 3 cut(s) 50, 442, 732
TaqI TCGA 9 cut(s) 416, 1542, 2255, 3256, 3775, 3962, 4450, 5059, 5410
TaqII GACCGA 2 cut(s) 4506, 4728
TatI WGTACW 8 cut(s) 1061, 2843, 3204, 3262, 3589, 4553, 4709, 5840
TscAI CASTG 9 cut(s) 285, 1000, 1157, 1795, 2270, 2830, 3083, 5404, 5719
TseFI GTSAC 7 cut(s) 576, 1646, 1761, 2464, 2575, 4247, 4951
Tsp45I GTSAC 7 cut(s) 576, 1646, 1761, 2464, 2575, 4247, 4951
TspGWI ACGGA 5 cut(s) 665, 813, 3451, 5537, 5772
TspRI CASTG 9 cut(s) 285, 1000, 1157, 1795, 2270, 2830, 3083, 5404, 5719
Van91I CCANNNNNTGG 2 cut(s) 757, 5130
Vha464I CTTAAG 1 cut(s) 1580
VneI GTGCAC 1 cut(s) 3143
VpaK11BI GGWCC 4 cut(s) 1425, 4005, 4605, 5293
VspI ATTAAT 1 cut(s) 887
XagI CCTNNNNNAGG 1 cut(s) 3524
XbaI TCTAGA 5 cut(s) 1033, 1156, 2905, 4174, 4634
XceI RCATGY 9 cut(s) 87, 540, 599, 674, 4133, 4161, 4354, 5120, 5866
XmiI GTMKAC 1 cut(s) 3867
XmnI GAANNNNTTC 3 cut(s) 141, 2817, 3608
ZrmI AGTACT 3 cut(s) 1063, 2845, 3264
Zsp2I ATGCAT 5 cut(s) 1372, 1999, 4131, 4766, 5122
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.