COP9 signalosome complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22920 AT1G22920 AT1G71230 |
| fragaria_vesca | FvH4_2g36890 FvH4_2g36890 FvH4_2g36890 |
| malus_domestica | MD08G1130400.v1.1 MD15G1108500.v1.1 |
| prunus_persica | Prupe.1G460800_v2.0.a1 |
| pyrus_communis | pycom08g10950 |
| rosa_chinensis | RchiOBHm_Chr6g0304891 |
| rosa_laevigata | RLG00000010941 |
| rosa_multiflora | Rmu_ssc0000278.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00163370 |
| rosa_rugosa | Rorug06G0336100 |
| rosa_samantha | Rh6AG447300 Rh6BG454200 Rh6CG460800 Rh6DG447800 |
| rosa_wichuraiana | Rw6G038940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 964 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 623 |
| Acc36I | ACCTGC | 1 cut(s) | 964 |
| Acc65I | GGTACC | 1 cut(s) | 435 |
| AccB1I | GGYRCC | 1 cut(s) | 435 |
| AccII | CGCG | 3 cut(s) | 8, 189, 209 |
| AciI | CCGC | 8 cut(s) | 65, 89, 128, 201, 243, 407, 412, 854 |
| AclWI | GGATC | 3 cut(s) | 533, 614, 750 |
| AcoI | YGGCCR | 1 cut(s) | 99 |
| AcsI | RAATTY | 1 cut(s) | 822 |
| AcyI | GRCGYC | 2 cut(s) | 105, 291 |
| AfaI | GTAC | 3 cut(s) | 437, 593, 1026 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 271, 329, 455, 794 |
| AgsI | TTSAA | 6 cut(s) | 184, 217, 329, 715, 1018, 1097 |
| AjnI | CCWGG | 1 cut(s) | 158 |
| AluBI | AGCT | 3 cut(s) | 34, 836, 844 |
| AluI | AGCT | 3 cut(s) | 34, 836, 844 |
| Alw21I | GWGCWC | 2 cut(s) | 36, 231 |
| Alw26I | GTCTC | 3 cut(s) | 332, 631, 798 |
| Alw44I | GTGCAC | 1 cut(s) | 227 |
| AlwI | GGATC | 3 cut(s) | 533, 614, 750 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 557 |
| Ama87I | CYCGRG | 2 cut(s) | 35, 469 |
| AoxI | GGCC | 4 cut(s) | 99, 162, 262, 884 |
| ApaLI | GTGCAC | 1 cut(s) | 227 |
| ApoI | RAATTY | 1 cut(s) | 822 |
| AseI | ATTAAT | 1 cut(s) | 890 |
| Asp718I | GGTACC | 1 cut(s) | 435 |
| AspLEI | GCGC | 3 cut(s) | 10, 189, 211 |
| AspS9I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| AsuC2I | CCSGG | 2 cut(s) | 235, 450 |
| AsuHPI | GGTGA | 3 cut(s) | 725, 777, 778 |
| AvaI | CYCGRG | 2 cut(s) | 35, 469 |
| AvaII | GGWCC | 2 cut(s) | 91, 246 |
| BaeGI | GKGCMC | 1 cut(s) | 231 |
| BanI | GGYRCC | 1 cut(s) | 435 |
| BanII | GRGCYC | 2 cut(s) | 36, 519 |
| BauI | CACGAG | 1 cut(s) | 945 |
| BbsI | GAAGAC | 1 cut(s) | 711 |
| Bbv12I | GWGCWC | 2 cut(s) | 36, 231 |
| BccI | CCATC | 5 cut(s) | 214, 257, 593, 1063, 1078 |
| BceAI | ACGGC | 2 cut(s) | 114, 301 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 475, 509 |
| BciT130I | CCWGG | 1 cut(s) | 160 |
| BcnI | CCSGG | 2 cut(s) | 235, 450 |
| BcoDI | GTCTC | 3 cut(s) | 332, 631, 798 |
| BfaI | CTAG | 3 cut(s) | 342, 833, 845 |
| BfmI | CTRYAG | 1 cut(s) | 1049 |
| BfuAI | ACCTGC | 1 cut(s) | 964 |
| BglII | AGATCT | 2 cut(s) | 195, 1040 |
| BisI | GCNGC | 2 cut(s) | 65, 129 |
| BlsI | GCNGC | 2 cut(s) | 66, 130 |
| Bme1390I | CCNGG | 3 cut(s) | 160, 235, 450 |
| Bme18I | GGWCC | 2 cut(s) | 91, 246 |
| BmeT110I | CYCGRG | 2 cut(s) | 35, 469 |
| BmgT120I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| BmiI | GGNNCC | 4 cut(s) | 93, 247, 437, 516 |
| BmrFI | CCNGG | 3 cut(s) | 160, 235, 450 |
| BmsI | GCATC | 3 cut(s) | 352, 449, 483 |
| BpiI | GAAGAC | 1 cut(s) | 711 |
| BpmI | CTGGAG | 1 cut(s) | 597 |
| Bpu10I | CCTNAGC | 2 cut(s) | 132, 354 |
| BpuMI | CCSGG | 2 cut(s) | 235, 450 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 291 |
| BsaJI | CCNNGG | 3 cut(s) | 54, 158, 159 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 795, 825 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 271, 329, 455, 794 |
| BseBI | CCWGG | 1 cut(s) | 160 |
| BseDI | CCNNGG | 3 cut(s) | 54, 158, 159 |
| BseGI | GGATG | 2 cut(s) | 445, 464 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 271, 329, 455, 794 |
| BseMII | CTCAG | 3 cut(s) | 146, 327, 368 |
| BseSI | GKGCMC | 1 cut(s) | 231 |
| BseX3I | CGGCCG | 1 cut(s) | 99 |
| BseYI | CCCAGC | 1 cut(s) | 18 |
| Bsh1236I | CGCG | 3 cut(s) | 8, 189, 209 |
| Bsh1285I | CGRYCG | 1 cut(s) | 102 |
| BshFI | GGCC | 4 cut(s) | 101, 164, 264, 886 |
| BshNI | GGYRCC | 1 cut(s) | 435 |
| BsiEI | CGRYCG | 1 cut(s) | 102 |
| BsiHKAI | GWGCWC | 2 cut(s) | 36, 231 |
| BsiHKCI | CYCGRG | 2 cut(s) | 35, 469 |
| BsiSI | CCGG | 2 cut(s) | 235, 449 |
| BslFI | GGGAC | 2 cut(s) | 259, 346 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 271, 329, 455, 794 |
| BsmAI | GTCTC | 3 cut(s) | 332, 631, 798 |
| BsmFI | GGGAC | 2 cut(s) | 259, 346 |
| BsmI | GAATGC | 1 cut(s) | 581 |
| BsnI | GGCC | 4 cut(s) | 101, 164, 264, 886 |
| BsoBI | CYCGRG | 2 cut(s) | 35, 469 |
| Bsp1286I | GDGCHC | 3 cut(s) | 36, 231, 519 |
| Bsp143I | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| Bsp19I | CCATGG | 1 cut(s) | 54 |
| BspACI | CCGC | 8 cut(s) | 65, 89, 128, 201, 243, 407, 412, 854 |
| BspANI | GGCC | 4 cut(s) | 101, 164, 264, 886 |
| BspCNI | CTCAG | 3 cut(s) | 145, 328, 367 |
| BspFNI | CGCG | 3 cut(s) | 8, 189, 209 |
| BspLI | GGNNCC | 4 cut(s) | 93, 247, 437, 516 |
| BspMI | ACCTGC | 1 cut(s) | 964 |
| BspPI | GGATC | 3 cut(s) | 533, 614, 750 |
| BspT107I | GGYRCC | 1 cut(s) | 435 |
| BssECI | CCNNGG | 3 cut(s) | 54, 158, 159 |
| BssMI | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| BssNI | GRCGYC | 2 cut(s) | 105, 291 |
| BssSI | CACGAG | 1 cut(s) | 945 |
| BssT1I | CCWWGG | 1 cut(s) | 54 |
| Bst2BI | CACGAG | 1 cut(s) | 945 |
| Bst2UI | CCWGG | 1 cut(s) | 160 |
| Bst4CI | ACNGT | 5 cut(s) | 553, 680, 687, 953, 967 |
| BstACI | GRCGYC | 2 cut(s) | 105, 291 |
| BstC8I | GCNNGC | 4 cut(s) | 231, 405, 464, 852 |
| BstDEI | CTNAG | 3 cut(s) | 132, 336, 354 |
| BstDSI | CCRYGG | 1 cut(s) | 54 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 269, 327 |
| BstF5I | GGATG | 2 cut(s) | 445, 464 |
| BstFNI | CGCG | 3 cut(s) | 8, 189, 209 |
| BstHHI | GCGC | 3 cut(s) | 10, 189, 211 |
| BstKTI | GATC | 6 cut(s) | 198, 541, 622, 745, 832, 1043 |
| BstMAI | GTCTC | 3 cut(s) | 332, 631, 798 |
| BstMBI | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| BstMCI | CGRYCG | 1 cut(s) | 102 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 14, 154, 409, 502 |
| BstNI | CCWGG | 1 cut(s) | 160 |
| BstSCI | CCNGG | 3 cut(s) | 158, 233, 448 |
| BstSFI | CTRYAG | 1 cut(s) | 1049 |
| BstSLI | GKGCMC | 1 cut(s) | 231 |
| BstUI | CGCG | 3 cut(s) | 8, 189, 209 |
| BstV2I | GAAGAC | 1 cut(s) | 711 |
| BstX2I | RGATCY | 3 cut(s) | 195, 742, 1040 |
| BstYI | RGATCY | 3 cut(s) | 195, 742, 1040 |
| BstZI | CGGCCG | 1 cut(s) | 99 |
| BsuRI | GGCC | 4 cut(s) | 101, 164, 264, 886 |
| BtgI | CCRYGG | 1 cut(s) | 54 |
| BtsCI | GGATG | 2 cut(s) | 445, 464 |
| BtsIMutI | CAGTG | 3 cut(s) | 558, 676, 958 |
| BveI | ACCTGC | 1 cut(s) | 964 |
| Cac8I | GCNNGC | 4 cut(s) | 231, 405, 464, 852 |
| CaiI | CAGNNNCTG | 1 cut(s) | 557 |
| CfoI | GCGC | 3 cut(s) | 10, 189, 211 |
| Cfr13I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| CseI | GACGC | 6 cut(s) | 14, 113, 178, 299, 317, 496 |
| Csp6I | GTAC | 3 cut(s) | 436, 592, 1025 |
| CviAII | CATG | 6 cut(s) | 27, 55, 259, 268, 304, 980 |
| CviQI | GTAC | 3 cut(s) | 436, 592, 1025 |
| DdeI | CTNAG | 3 cut(s) | 132, 336, 354 |
| DpnI | GATC | 6 cut(s) | 197, 540, 621, 744, 831, 1042 |
| DpnII | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 623 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 623 |
| EaeI | YGGCCR | 1 cut(s) | 99 |
| EagI | CGGCCG | 1 cut(s) | 99 |
| EciI | GGCGGA | 2 cut(s) | 104, 190 |
| Ecl136II | GAGCTC | 1 cut(s) | 34 |
| EclXI | CGGCCG | 1 cut(s) | 99 |
| Eco130I | CCWWGG | 1 cut(s) | 54 |
| Eco24I | GRGCYC | 2 cut(s) | 36, 519 |
| Eco32I | GATATC | 1 cut(s) | 703 |
| Eco47I | GGWCC | 2 cut(s) | 91, 246 |
| Eco52I | CGGCCG | 1 cut(s) | 99 |
| Eco53kI | GAGCTC | 1 cut(s) | 34 |
| Eco88I | CYCGRG | 2 cut(s) | 35, 469 |
| EcoICRI | GAGCTC | 1 cut(s) | 34 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 269, 327 |
| EcoRII | CCWGG | 1 cut(s) | 158 |
| EcoRV | GATATC | 1 cut(s) | 703 |
| EcoT14I | CCWWGG | 1 cut(s) | 54 |
| EcoT38I | GRGCYC | 2 cut(s) | 36, 519 |
| ErhI | CCWWGG | 1 cut(s) | 54 |
| FaeI | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 983 |
| FaqI | GGGAC | 2 cut(s) | 259, 346 |
| FatI | CATG | 6 cut(s) | 26, 54, 258, 267, 303, 979 |
| FauI | CCCGC | 2 cut(s) | 236, 400 |
| Fnu4HI | GCNGC | 2 cut(s) | 65, 129 |
| FokI | GGATG | 2 cut(s) | 432, 471 |
| FriOI | GRGCYC | 2 cut(s) | 36, 519 |
| Fsp4HI | GCNGC | 2 cut(s) | 65, 129 |
| FspBI | CTAG | 3 cut(s) | 342, 833, 845 |
| GlaI | GCGC | 3 cut(s) | 9, 188, 210 |
| GluI | GCNGC | 2 cut(s) | 65, 129 |
| GsaI | CCCAGC | 1 cut(s) | 22 |
| GsuI | CTGGAG | 1 cut(s) | 597 |
| HaeIII | GGCC | 4 cut(s) | 101, 164, 264, 886 |
| HapII | CCGG | 2 cut(s) | 235, 449 |
| HgaI | GACGC | 6 cut(s) | 14, 113, 178, 299, 317, 496 |
| HhaI | GCGC | 3 cut(s) | 10, 189, 211 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 291 |
| Hin1II | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 983 |
| Hin6I | GCGC | 3 cut(s) | 8, 187, 209 |
| HinP1I | GCGC | 3 cut(s) | 8, 187, 209 |
| HincII | GTYRAC | 1 cut(s) | 571 |
| HindII | GTYRAC | 1 cut(s) | 571 |
| HinfI | GANTC | 2 cut(s) | 859, 923 |
| HpaII | CCGG | 2 cut(s) | 235, 449 |
| HphI | GGTGA | 3 cut(s) | 725, 777, 778 |
| Hpy166II | GTNNAC | 4 cut(s) | 229, 571, 676, 683 |
| Hpy188I | TCNGA | 7 cut(s) | 549, 631, 639, 651, 829, 987, 1078 |
| Hpy8I | GTNNAC | 4 cut(s) | 229, 571, 676, 683 |
| Hpy99I | CGWCG | 6 cut(s) | 100, 107, 125, 287, 293, 490 |
| HpyAV | CCTTC | 2 cut(s) | 79, 323 |
| HpyCH4III | ACNGT | 5 cut(s) | 553, 680, 687, 953, 967 |
| HpyCH4IV | ACGT | 2 cut(s) | 45, 590 |
| HpyCH4V | TGCA | 5 cut(s) | 229, 271, 581, 956, 979 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 14, 154, 409, 502 |
| HpyF3I | CTNAG | 3 cut(s) | 132, 336, 354 |
| HpySE526I | ACGT | 2 cut(s) | 45, 590 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 291 |
| Hsp92II | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 983 |
| HspAI | GCGC | 3 cut(s) | 8, 187, 209 |
| KpnI | GGTACC | 1 cut(s) | 439 |
| Kzo9I | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| LmnI | GCTCC | 2 cut(s) | 31, 514 |
| LweI | GCATC | 3 cut(s) | 352, 449, 483 |
| MaeI | CTAG | 3 cut(s) | 342, 833, 845 |
| MaeII | ACGT | 2 cut(s) | 45, 590 |
| MaeIII | GTNAC | 2 cut(s) | 947, 990 |
| MalI | GATC | 6 cut(s) | 197, 540, 621, 744, 831, 1042 |
| MboI | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| MboII | GAAGA | 5 cut(s) | 229, 711, 771, 932, 1065 |
| MflI | RGATCY | 3 cut(s) | 195, 742, 1040 |
| MhlI | GDGCHC | 3 cut(s) | 36, 231, 519 |
| MluCI | AATT | 4 cut(s) | 657, 822, 939, 1018 |
| MmeI | TCCRAC | 3 cut(s) | 396, 566, 1059 |
| MseI | TTAA | 3 cut(s) | 348, 498, 890 |
| MspI | CCGG | 2 cut(s) | 235, 449 |
| MspR9I | CCNGG | 3 cut(s) | 160, 235, 450 |
| Mva1269I | GAATGC | 1 cut(s) | 581 |
| MvaI | CCWGG | 1 cut(s) | 160 |
| MvnI | CGCG | 3 cut(s) | 8, 189, 209 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 14, 154, 409, 502 |
| NciI | CCSGG | 2 cut(s) | 235, 450 |
| NcoI | CCATGG | 1 cut(s) | 54 |
| NdeII | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| NlaIII | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 983 |
| NlaIV | GGNNCC | 4 cut(s) | 93, 247, 437, 516 |
| NmeAIII | GCCGAG | 1 cut(s) | 93 |
| NmuCI | GTSAC | 2 cut(s) | 947, 990 |
| PaeR7I | CTCGAG | 1 cut(s) | 35 |
| PaqCI | CACCTGC | 1 cut(s) | 964 |
| PasI | CCCWGGG | 1 cut(s) | 159 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 42, 297 |
| PctI | GAATGC | 1 cut(s) | 581 |
| PfeI | GAWTC | 2 cut(s) | 859, 923 |
| PflFI | GACNNNGTC | 1 cut(s) | 553 |
| PkrI | GCNGC | 2 cut(s) | 66, 130 |
| PshBI | ATTAAT | 1 cut(s) | 890 |
| Psp124BI | GAGCTC | 1 cut(s) | 36 |
| Psp6I | CCWGG | 1 cut(s) | 158 |
| PspFI | CCCAGC | 1 cut(s) | 18 |
| PspGI | CCWGG | 1 cut(s) | 158 |
| PspN4I | GGNNCC | 4 cut(s) | 93, 247, 437, 516 |
| PspPI | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| PstNI | CAGNNNCTG | 1 cut(s) | 557 |
| PsuI | RGATCY | 3 cut(s) | 195, 742, 1040 |
| PsyI | GACNNNGTC | 1 cut(s) | 553 |
| RsaI | GTAC | 3 cut(s) | 437, 593, 1026 |
| RsaNI | GTAC | 3 cut(s) | 436, 592, 1025 |
| SacI | GAGCTC | 1 cut(s) | 36 |
| SaqAI | TTAA | 3 cut(s) | 348, 498, 890 |
| SatI | GCNGC | 2 cut(s) | 65, 129 |
| Sau3AI | GATC | 6 cut(s) | 195, 538, 619, 742, 829, 1040 |
| Sau96I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| ScrFI | CCNGG | 3 cut(s) | 160, 235, 450 |
| SduI | GDGCHC | 3 cut(s) | 36, 231, 519 |
| SfaNI | GCATC | 3 cut(s) | 352, 449, 483 |
| SfcI | CTRYAG | 1 cut(s) | 1049 |
| Sfr274I | CTCGAG | 1 cut(s) | 35 |
| SinI | GGWCC | 2 cut(s) | 91, 246 |
| SlaI | CTCGAG | 1 cut(s) | 35 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| Sse9I | AATT | 4 cut(s) | 657, 822, 939, 1018 |
| SsiI | CCGC | 8 cut(s) | 65, 89, 128, 201, 243, 407, 412, 854 |
| SspMI | CTAG | 3 cut(s) | 342, 833, 845 |
| SstI | GAGCTC | 1 cut(s) | 36 |
| StyD4I | CCNGG | 3 cut(s) | 158, 233, 448 |
| StyI | CCWWGG | 1 cut(s) | 54 |
| TaaI | ACNGT | 5 cut(s) | 553, 680, 687, 953, 967 |
| TaiI | ACGT | 2 cut(s) | 48, 593 |
| TaqI | TCGA | 4 cut(s) | 36, 252, 485, 969 |
| TaqII | GACCGA | 1 cut(s) | 296 |
| TasI | AATT | 4 cut(s) | 657, 822, 939, 1018 |
| TauI | GCSGC | 2 cut(s) | 67, 131 |
| TfiI | GAWTC | 2 cut(s) | 859, 923 |
| Tru1I | TTAA | 3 cut(s) | 348, 498, 890 |
| Tru9I | TTAA | 3 cut(s) | 348, 498, 890 |
| TscAI | CASTG | 3 cut(s) | 558, 683, 958 |
| TseFI | GTSAC | 2 cut(s) | 947, 990 |
| Tsp45I | GTSAC | 2 cut(s) | 947, 990 |
| TspRI | CASTG | 3 cut(s) | 558, 683, 958 |
| Tth111I | GACNNNGTC | 1 cut(s) | 553 |
| VneI | GTGCAC | 1 cut(s) | 227 |
| VpaK11BI | GGWCC | 2 cut(s) | 91, 246 |
| VspI | ATTAAT | 1 cut(s) | 890 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 269, 327 |
| XapI | RAATTY | 1 cut(s) | 822 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 256, 301 |
| XhoI | CTCGAG | 1 cut(s) | 35 |
| XspI | CTAG | 3 cut(s) | 342, 833, 845 |