COP9 signalosome complex subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22920 AT1G22920 AT1G71230 |
| fragaria_vesca | FvH4_2g36890 FvH4_2g36890 FvH4_2g36890 |
| malus_domestica | MD08G1130400.v1.1 MD15G1108500.v1.1 |
| prunus_persica | Prupe.1G460800_v2.0.a1 |
| pyrus_communis | pycom08g10950 |
| rosa_chinensis | RchiOBHm_Chr6g0304891 |
| rosa_laevigata | RLG00000010941 |
| rosa_multiflora | Rmu_ssc0000278.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00163370 |
| rosa_rugosa | Rorug06G0336100 |
| rosa_samantha | Rh6AG447300 Rh6BG454200 Rh6CG460800 Rh6DG447800 |
| rosa_wichuraiana | Rw6G038940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 964 |
| Acc36I | ACCTGC | 1 cut(s) | 964 |
| Acc65I | GGTACC | 1 cut(s) | 435 |
| AccB1I | GGYRCC | 1 cut(s) | 435 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 739 |
| AccII | CGCG | 3 cut(s) | 8, 189, 209 |
| AciI | CCGC | 4 cut(s) | 89, 128, 201, 412 |
| AclWI | GGATC | 2 cut(s) | 533, 750 |
| AcoI | YGGCCR | 1 cut(s) | 99 |
| AcsI | RAATTY | 1 cut(s) | 822 |
| AcyI | GRCGYC | 2 cut(s) | 105, 291 |
| AfaI | GTAC | 4 cut(s) | 228, 374, 437, 1026 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 271, 329, 455, 739, 794 |
| AgsI | TTSAA | 6 cut(s) | 184, 217, 329, 715, 1018, 1094 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 625 |
| AjnI | CCWGG | 2 cut(s) | 158, 448 |
| AluBI | AGCT | 3 cut(s) | 34, 560, 836 |
| AluI | AGCT | 3 cut(s) | 34, 560, 836 |
| Alw21I | GWGCWC | 2 cut(s) | 678, 981 |
| Alw26I | GTCTC | 2 cut(s) | 332, 873 |
| Alw44I | GTGCAC | 2 cut(s) | 674, 977 |
| AlwI | GGATC | 2 cut(s) | 533, 750 |
| AoxI | GGCC | 5 cut(s) | 99, 135, 262, 357, 884 |
| ApaLI | GTGCAC | 2 cut(s) | 674, 977 |
| ApoI | RAATTY | 1 cut(s) | 822 |
| AseI | ATTAAT | 1 cut(s) | 890 |
| Asp718I | GGTACC | 1 cut(s) | 435 |
| AspLEI | GCGC | 4 cut(s) | 10, 133, 189, 211 |
| AspS9I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| AsuHPI | GGTGA | 2 cut(s) | 777, 778 |
| AvaII | GGWCC | 3 cut(s) | 91, 162, 246 |
| BaeGI | GKGCMC | 2 cut(s) | 678, 981 |
| BanI | GGYRCC | 1 cut(s) | 435 |
| BanII | GRGCYC | 1 cut(s) | 519 |
| BauI | CACGAG | 1 cut(s) | 945 |
| BbsI | GAAGAC | 1 cut(s) | 711 |
| Bbv12I | GWGCWC | 2 cut(s) | 678, 981 |
| BccI | CCATC | 5 cut(s) | 214, 257, 1063, 1078, 1081 |
| BciT130I | CCWGG | 2 cut(s) | 160, 450 |
| BcoDI | GTCTC | 2 cut(s) | 332, 873 |
| BfaI | CTAG | 3 cut(s) | 35, 342, 833 |
| BfuAI | ACCTGC | 1 cut(s) | 964 |
| BglII | AGATCT | 1 cut(s) | 195 |
| BisI | GCNGC | 1 cut(s) | 129 |
| BlsI | GCNGC | 1 cut(s) | 130 |
| Bme1390I | CCNGG | 2 cut(s) | 160, 450 |
| Bme18I | GGWCC | 3 cut(s) | 91, 162, 246 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 625 |
| BmgT120I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| BmiI | GGNNCC | 5 cut(s) | 93, 247, 437, 516, 1068 |
| BmrFI | CCNGG | 2 cut(s) | 160, 450 |
| BmsI | GCATC | 3 cut(s) | 352, 449, 483 |
| BpiI | GAAGAC | 1 cut(s) | 711 |
| BpmI | CTGGAG | 2 cut(s) | 597, 866 |
| Bpu10I | CCTNAGC | 1 cut(s) | 354 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 291 |
| BsaJI | CCNNGG | 2 cut(s) | 54, 158 |
| BsaWI | WCCGGW | 1 cut(s) | 239 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 795, 825 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 271, 329, 455, 739, 794 |
| Bse1I | ACTGG | 1 cut(s) | 849 |
| Bse3DI | GCAATG | 1 cut(s) | 805 |
| BseBI | CCWGG | 2 cut(s) | 160, 450 |
| BseDI | CCNNGG | 2 cut(s) | 54, 158 |
| BseGI | GGATG | 2 cut(s) | 445, 464 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 271, 329, 455, 739, 794 |
| BseMI | GCAATG | 1 cut(s) | 805 |
| BseMII | CTCAG | 2 cut(s) | 327, 368 |
| BseNI | ACTGG | 1 cut(s) | 849 |
| BseSI | GKGCMC | 2 cut(s) | 678, 981 |
| BseX3I | CGGCCG | 1 cut(s) | 99 |
| BseYI | CCCAGC | 1 cut(s) | 18 |
| Bsh1236I | CGCG | 3 cut(s) | 8, 189, 209 |
| Bsh1285I | CGRYCG | 1 cut(s) | 102 |
| BshFI | GGCC | 5 cut(s) | 101, 137, 264, 359, 886 |
| BshNI | GGYRCC | 1 cut(s) | 435 |
| BsiEI | CGRYCG | 1 cut(s) | 102 |
| BsiHKAI | GWGCWC | 2 cut(s) | 678, 981 |
| BsiSI | CCGG | 1 cut(s) | 240 |
| BslFI | GGGAC | 3 cut(s) | 259, 302, 346 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 271, 329, 455, 739, 794 |
| BsmAI | GTCTC | 2 cut(s) | 332, 873 |
| BsmFI | GGGAC | 3 cut(s) | 259, 302, 346 |
| BsmI | GAATGC | 1 cut(s) | 581 |
| BsnI | GGCC | 5 cut(s) | 101, 137, 264, 359, 886 |
| Bsp1286I | GDGCHC | 3 cut(s) | 519, 678, 981 |
| Bsp143I | GATC | 4 cut(s) | 195, 538, 742, 829 |
| Bsp19I | CCATGG | 1 cut(s) | 54 |
| BspACI | CCGC | 4 cut(s) | 89, 128, 201, 412 |
| BspANI | GGCC | 5 cut(s) | 101, 137, 264, 359, 886 |
| BspCNI | CTCAG | 2 cut(s) | 328, 367 |
| BspFNI | CGCG | 3 cut(s) | 8, 189, 209 |
| BspLI | GGNNCC | 5 cut(s) | 93, 247, 437, 516, 1068 |
| BspMI | ACCTGC | 1 cut(s) | 964 |
| BspPI | GGATC | 2 cut(s) | 533, 750 |
| BspT107I | GGYRCC | 1 cut(s) | 435 |
| BsrDI | GCAATG | 1 cut(s) | 805 |
| BsrI | ACTGG | 1 cut(s) | 849 |
| BssECI | CCNNGG | 2 cut(s) | 54, 158 |
| BssMI | GATC | 4 cut(s) | 195, 538, 742, 829 |
| BssNI | GRCGYC | 2 cut(s) | 105, 291 |
| BssSI | CACGAG | 1 cut(s) | 945 |
| BssT1I | CCWWGG | 1 cut(s) | 54 |
| Bst2BI | CACGAG | 1 cut(s) | 945 |
| Bst2UI | CCWGG | 2 cut(s) | 160, 450 |
| Bst4CI | ACNGT | 6 cut(s) | 553, 680, 687, 953, 967, 983 |
| BstACI | GRCGYC | 2 cut(s) | 105, 291 |
| BstC8I | GCNNGC | 4 cut(s) | 135, 405, 464, 852 |
| BstDEI | CTNAG | 2 cut(s) | 336, 354 |
| BstDSI | CCRYGG | 1 cut(s) | 54 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 269, 327 |
| BstF5I | GGATG | 2 cut(s) | 445, 464 |
| BstFNI | CGCG | 3 cut(s) | 8, 189, 209 |
| BstHHI | GCGC | 4 cut(s) | 10, 133, 189, 211 |
| BstKTI | GATC | 4 cut(s) | 198, 541, 745, 832 |
| BstMAI | GTCTC | 2 cut(s) | 332, 873 |
| BstMBI | GATC | 4 cut(s) | 195, 538, 742, 829 |
| BstMCI | CGRYCG | 1 cut(s) | 102 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 14, 134, 154, 409, 502 |
| BstNI | CCWGG | 2 cut(s) | 160, 450 |
| BstSCI | CCNGG | 2 cut(s) | 158, 448 |
| BstSLI | GKGCMC | 2 cut(s) | 678, 981 |
| BstUI | CGCG | 3 cut(s) | 8, 189, 209 |
| BstV2I | GAAGAC | 1 cut(s) | 711 |
| BstX2I | RGATCY | 2 cut(s) | 195, 742 |
| BstYI | RGATCY | 2 cut(s) | 195, 742 |
| BstZI | CGGCCG | 1 cut(s) | 99 |
| BsuRI | GGCC | 5 cut(s) | 101, 137, 264, 359, 886 |
| BtgI | CCRYGG | 1 cut(s) | 54 |
| BtsCI | GGATG | 2 cut(s) | 445, 464 |
| BtsIMutI | CAGTG | 3 cut(s) | 558, 676, 958 |
| BveI | ACCTGC | 1 cut(s) | 964 |
| Cac8I | GCNNGC | 4 cut(s) | 135, 405, 464, 852 |
| CfoI | GCGC | 4 cut(s) | 10, 133, 189, 211 |
| Cfr13I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| CseI | GACGC | 5 cut(s) | 14, 113, 178, 299, 317 |
| Csp6I | GTAC | 4 cut(s) | 227, 373, 436, 1025 |
| CviAII | CATG | 6 cut(s) | 27, 55, 259, 268, 304, 376 |
| CviQI | GTAC | 4 cut(s) | 227, 373, 436, 1025 |
| DdeI | CTNAG | 2 cut(s) | 336, 354 |
| DpnI | GATC | 4 cut(s) | 197, 540, 744, 831 |
| DpnII | GATC | 4 cut(s) | 195, 538, 742, 829 |
| DriI | GACNNNNNGTC | 1 cut(s) | 625 |
| EaeI | YGGCCR | 1 cut(s) | 99 |
| EagI | CGGCCG | 1 cut(s) | 99 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 625 |
| EciI | GGCGGA | 2 cut(s) | 104, 190 |
| EclXI | CGGCCG | 1 cut(s) | 99 |
| Eco130I | CCWWGG | 1 cut(s) | 54 |
| Eco24I | GRGCYC | 1 cut(s) | 519 |
| Eco32I | GATATC | 1 cut(s) | 703 |
| Eco47I | GGWCC | 3 cut(s) | 91, 162, 246 |
| Eco52I | CGGCCG | 1 cut(s) | 99 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 269, 327 |
| EcoRII | CCWGG | 2 cut(s) | 158, 448 |
| EcoRV | GATATC | 1 cut(s) | 703 |
| EcoT14I | CCWWGG | 1 cut(s) | 54 |
| EcoT38I | GRGCYC | 1 cut(s) | 519 |
| ErhI | CCWWGG | 1 cut(s) | 54 |
| FaeI | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 379 |
| FaqI | GGGAC | 3 cut(s) | 259, 302, 346 |
| FatI | CATG | 6 cut(s) | 26, 54, 258, 267, 303, 375 |
| Fnu4HI | GCNGC | 1 cut(s) | 129 |
| FokI | GGATG | 2 cut(s) | 432, 471 |
| FriOI | GRGCYC | 1 cut(s) | 519 |
| Fsp4HI | GCNGC | 1 cut(s) | 129 |
| FspBI | CTAG | 3 cut(s) | 35, 342, 833 |
| GlaI | GCGC | 4 cut(s) | 9, 132, 188, 210 |
| GluI | GCNGC | 1 cut(s) | 129 |
| GsaI | CCCAGC | 1 cut(s) | 22 |
| GsuI | CTGGAG | 2 cut(s) | 597, 866 |
| HaeIII | GGCC | 5 cut(s) | 101, 137, 264, 359, 886 |
| HapII | CCGG | 1 cut(s) | 240 |
| HgaI | GACGC | 5 cut(s) | 14, 113, 178, 299, 317 |
| HhaI | GCGC | 4 cut(s) | 10, 133, 189, 211 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 291 |
| Hin1II | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 379 |
| Hin6I | GCGC | 4 cut(s) | 8, 131, 187, 209 |
| HinP1I | GCGC | 4 cut(s) | 8, 131, 187, 209 |
| HincII | GTYRAC | 1 cut(s) | 571 |
| HindII | GTYRAC | 1 cut(s) | 571 |
| HinfI | GANTC | 1 cut(s) | 923 |
| HpaII | CCGG | 1 cut(s) | 240 |
| HphI | GGTGA | 2 cut(s) | 777, 778 |
| Hpy166II | GTNNAC | 6 cut(s) | 229, 382, 571, 676, 683, 979 |
| Hpy188I | TCNGA | 8 cut(s) | 69, 549, 631, 639, 651, 829, 987, 1075 |
| Hpy188III | TCNNGA | 8 cut(s) | 193, 214, 512, 586, 614, 698, 725, 947 |
| Hpy8I | GTNNAC | 6 cut(s) | 229, 382, 571, 676, 683, 979 |
| Hpy99I | CGWCG | 3 cut(s) | 100, 107, 125 |
| HpyAV | CCTTC | 4 cut(s) | 79, 323, 593, 907 |
| HpyCH4III | ACNGT | 6 cut(s) | 553, 680, 687, 953, 967, 983 |
| HpyCH4IV | ACGT | 1 cut(s) | 1027 |
| HpyCH4V | TGCA | 5 cut(s) | 271, 581, 676, 956, 979 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 14, 134, 154, 409, 502 |
| HpyF3I | CTNAG | 2 cut(s) | 336, 354 |
| HpySE526I | ACGT | 1 cut(s) | 1027 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 291 |
| Hsp92II | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 379 |
| HspAI | GCGC | 4 cut(s) | 8, 131, 187, 209 |
| KpnI | GGTACC | 1 cut(s) | 439 |
| Kzo9I | GATC | 4 cut(s) | 195, 538, 742, 829 |
| LmnI | GCTCC | 3 cut(s) | 31, 514, 847 |
| LweI | GCATC | 3 cut(s) | 352, 449, 483 |
| MaeI | CTAG | 3 cut(s) | 35, 342, 833 |
| MaeII | ACGT | 1 cut(s) | 1027 |
| MaeIII | GTNAC | 2 cut(s) | 947, 990 |
| MalI | GATC | 4 cut(s) | 197, 540, 744, 831 |
| MboI | GATC | 4 cut(s) | 195, 538, 742, 829 |
| MboII | GAAGA | 5 cut(s) | 229, 711, 737, 771, 932 |
| MflI | RGATCY | 2 cut(s) | 195, 742 |
| MhlI | GDGCHC | 3 cut(s) | 519, 678, 981 |
| MluCI | AATT | 5 cut(s) | 506, 657, 822, 939, 1018 |
| MmeI | TCCRAC | 3 cut(s) | 396, 566, 1059 |
| MseI | TTAA | 2 cut(s) | 348, 890 |
| MslI | CAYNNNNRTG | 1 cut(s) | 491 |
| MspA1I | CMGCKG | 1 cut(s) | 560 |
| MspI | CCGG | 1 cut(s) | 240 |
| MspR9I | CCNGG | 2 cut(s) | 160, 450 |
| Mva1269I | GAATGC | 1 cut(s) | 581 |
| MvaI | CCWGG | 2 cut(s) | 160, 450 |
| MvnI | CGCG | 3 cut(s) | 8, 189, 209 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 14, 134, 154, 409, 502 |
| NcoI | CCATGG | 1 cut(s) | 54 |
| NdeII | GATC | 4 cut(s) | 195, 538, 742, 829 |
| NlaIII | CATG | 6 cut(s) | 30, 58, 262, 271, 307, 379 |
| NlaIV | GGNNCC | 5 cut(s) | 93, 247, 437, 516, 1068 |
| NmuCI | GTSAC | 2 cut(s) | 947, 990 |
| PaqCI | CACCTGC | 1 cut(s) | 964 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 297 |
| PctI | GAATGC | 1 cut(s) | 581 |
| PfeI | GAWTC | 1 cut(s) | 923 |
| PflFI | GACNNNGTC | 1 cut(s) | 553 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 739 |
| PkrI | GCNGC | 1 cut(s) | 130 |
| PshBI | ATTAAT | 1 cut(s) | 890 |
| Psp6I | CCWGG | 2 cut(s) | 158, 448 |
| PspFI | CCCAGC | 1 cut(s) | 18 |
| PspGI | CCWGG | 2 cut(s) | 158, 448 |
| PspN4I | GGNNCC | 5 cut(s) | 93, 247, 437, 516, 1068 |
| PspPI | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| PsuI | RGATCY | 2 cut(s) | 195, 742 |
| PsyI | GACNNNGTC | 1 cut(s) | 553 |
| PvuII | CAGCTG | 1 cut(s) | 560 |
| RsaI | GTAC | 4 cut(s) | 228, 374, 437, 1026 |
| RsaNI | GTAC | 4 cut(s) | 227, 373, 436, 1025 |
| RseI | CAYNNNNRTG | 1 cut(s) | 491 |
| SaqAI | TTAA | 2 cut(s) | 348, 890 |
| SatI | GCNGC | 1 cut(s) | 129 |
| Sau3AI | GATC | 4 cut(s) | 195, 538, 742, 829 |
| Sau96I | GGNCC | 5 cut(s) | 91, 162, 246, 262, 884 |
| ScrFI | CCNGG | 2 cut(s) | 160, 450 |
| SduI | GDGCHC | 3 cut(s) | 519, 678, 981 |
| SfaNI | GCATC | 3 cut(s) | 352, 449, 483 |
| SinI | GGWCC | 3 cut(s) | 91, 162, 246 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 491 |
| Sse9I | AATT | 5 cut(s) | 506, 657, 822, 939, 1018 |
| SsiI | CCGC | 4 cut(s) | 89, 128, 201, 412 |
| SspMI | CTAG | 3 cut(s) | 35, 342, 833 |
| StyD4I | CCNGG | 2 cut(s) | 158, 448 |
| StyI | CCWWGG | 1 cut(s) | 54 |
| TaaI | ACNGT | 6 cut(s) | 553, 680, 687, 953, 967, 983 |
| TaiI | ACGT | 1 cut(s) | 1030 |
| TaqI | TCGA | 3 cut(s) | 83, 252, 969 |
| TasI | AATT | 5 cut(s) | 506, 657, 822, 939, 1018 |
| TatI | WGTACW | 1 cut(s) | 372 |
| TauI | GCSGC | 1 cut(s) | 131 |
| TfiI | GAWTC | 1 cut(s) | 923 |
| Tru1I | TTAA | 2 cut(s) | 348, 890 |
| Tru9I | TTAA | 2 cut(s) | 348, 890 |
| TscAI | CASTG | 3 cut(s) | 558, 683, 958 |
| TseFI | GTSAC | 2 cut(s) | 947, 990 |
| Tsp45I | GTSAC | 2 cut(s) | 947, 990 |
| TspGWI | ACGGA | 2 cut(s) | 296, 1079 |
| TspRI | CASTG | 3 cut(s) | 558, 683, 958 |
| Tth111I | GACNNNGTC | 1 cut(s) | 553 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 739 |
| VneI | GTGCAC | 2 cut(s) | 674, 977 |
| VpaK11BI | GGWCC | 3 cut(s) | 91, 162, 246 |
| VspI | ATTAAT | 1 cut(s) | 890 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 269, 327 |
| XapI | RAATTY | 1 cut(s) | 822 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 256, 301, 446 |
| XspI | CTAG | 3 cut(s) | 35, 342, 833 |