JAB/MPN domain
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G22920 AT1G22920 AT1G71230 |
| fragaria_vesca | FvH4_2g36890 FvH4_2g36890 FvH4_2g36890 |
| malus_domestica | MD08G1130400.v1.1 MD15G1108500.v1.1 |
| prunus_persica | Prupe.1G460800_v2.0.a1 |
| pyrus_communis | pycom08g10950 |
| rosa_chinensis | RchiOBHm_Chr6g0304891 |
| rosa_laevigata | RLG00000010941 |
| rosa_multiflora | Rmu_ssc0000278.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00163370 |
| rosa_rugosa | Rorug06G0336100 |
| rosa_samantha | Rh6AG447300 Rh6BG454200 Rh6CG460800 Rh6DG447800 |
| rosa_wichuraiana | Rw6G038940 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 970 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 100 |
| Acc36I | ACCTGC | 1 cut(s) | 970 |
| Acc65I | GGTACC | 1 cut(s) | 441 |
| AccB1I | GGYRCC | 3 cut(s) | 251, 338, 441 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 745 |
| AccII | CGCG | 5 cut(s) | 80, 195, 215, 239, 241 |
| AciI | CCGC | 7 cut(s) | 75, 80, 134, 207, 249, 413, 883 |
| AclWI | GGATC | 2 cut(s) | 620, 756 |
| AcoI | YGGCCR | 1 cut(s) | 105 |
| AcsI | RAATTY | 1 cut(s) | 828 |
| AcuI | CTGAAG | 1 cut(s) | 242 |
| AcyI | GRCGYC | 3 cut(s) | 111, 297, 315 |
| AfaI | GTAC | 1 cut(s) | 443 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 71, 74, 226, 277, 335, 348, 461, 745, 800 |
| AgsI | TTSAA | 3 cut(s) | 190, 492, 721 |
| AjnI | CCWGG | 3 cut(s) | 26, 360, 454 |
| AluBI | AGCT | 3 cut(s) | 34, 842, 850 |
| AluI | AGCT | 3 cut(s) | 34, 842, 850 |
| Alw21I | GWGCWC | 2 cut(s) | 36, 684 |
| Alw26I | GTCTC | 3 cut(s) | 338, 804, 879 |
| Alw44I | GTGCAC | 1 cut(s) | 680 |
| AlwI | GGATC | 2 cut(s) | 620, 756 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 563 |
| Ama87I | CYCGRG | 1 cut(s) | 35 |
| AoxI | GGCC | 3 cut(s) | 105, 268, 363 |
| ApaLI | GTGCAC | 1 cut(s) | 680 |
| ApoI | RAATTY | 1 cut(s) | 828 |
| Asp718I | GGTACC | 1 cut(s) | 441 |
| AspLEI | GCGC | 6 cut(s) | 80, 139, 195, 217, 241, 243 |
| AspS9I | GGNCC | 3 cut(s) | 97, 268, 890 |
| AsuHPI | GGTGA | 3 cut(s) | 443, 783, 784 |
| AvaI | CYCGRG | 1 cut(s) | 35 |
| AvaII | GGWCC | 2 cut(s) | 97, 890 |
| BaeGI | GKGCMC | 2 cut(s) | 341, 684 |
| BanI | GGYRCC | 3 cut(s) | 251, 338, 441 |
| BanII | GRGCYC | 2 cut(s) | 36, 525 |
| BbsI | GAAGAC | 1 cut(s) | 98 |
| Bbv12I | GWGCWC | 2 cut(s) | 36, 684 |
| BccI | CCATC | 7 cut(s) | 49, 122, 220, 263, 308, 432, 638 |
| BceAI | ACGGC | 2 cut(s) | 148, 307 |
| BciT130I | CCWGG | 3 cut(s) | 28, 362, 456 |
| BcoDI | GTCTC | 3 cut(s) | 338, 804, 879 |
| BfaI | CTAG | 2 cut(s) | 348, 951 |
| BfuAI | ACCTGC | 1 cut(s) | 970 |
| BglII | AGATCT | 1 cut(s) | 201 |
| BisI | GCNGC | 4 cut(s) | 76, 81, 135, 250 |
| BlsI | GCNGC | 4 cut(s) | 77, 82, 136, 251 |
| Bme1390I | CCNGG | 3 cut(s) | 28, 362, 456 |
| Bme18I | GGWCC | 2 cut(s) | 97, 890 |
| BmeT110I | CYCGRG | 1 cut(s) | 35 |
| BmgT120I | GGNCC | 3 cut(s) | 97, 268, 890 |
| BmiI | GGNNCC | 5 cut(s) | 99, 253, 340, 443, 522 |
| BmrFI | CCNGG | 3 cut(s) | 28, 362, 456 |
| BmsI | GCATC | 2 cut(s) | 358, 455 |
| BoxI | GACNNNNGTC | 1 cut(s) | 350 |
| BpiI | GAAGAC | 1 cut(s) | 98 |
| BpmI | CTGGAG | 3 cut(s) | 443, 603, 872 |
| BsaHI | GRCGYC | 3 cut(s) | 111, 297, 315 |
| BsaJI | CCNNGG | 4 cut(s) | 27, 164, 360, 454 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 149, 179, 201, 227, 231, 257, 801, 831 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 71, 74, 226, 277, 335, 348, 461, 745, 800 |
| Bse118I | RCCGGY | 1 cut(s) | 328 |
| Bse1I | ACTGG | 1 cut(s) | 426 |
| BseBI | CCWGG | 3 cut(s) | 28, 362, 456 |
| BseDI | CCNNGG | 4 cut(s) | 27, 164, 360, 454 |
| BseGI | GGATG | 4 cut(s) | 10, 443, 470, 928 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 71, 74, 226, 277, 335, 348, 461, 745, 800 |
| BseMII | CTCAG | 1 cut(s) | 509 |
| BseNI | ACTGG | 1 cut(s) | 426 |
| BsePI | GCGCGC | 1 cut(s) | 239 |
| BseSI | GKGCMC | 2 cut(s) | 341, 684 |
| BseX3I | CGGCCG | 1 cut(s) | 105 |
| Bsh1236I | CGCG | 5 cut(s) | 80, 195, 215, 239, 241 |
| Bsh1285I | CGRYCG | 1 cut(s) | 108 |
| BshFI | GGCC | 3 cut(s) | 107, 270, 365 |
| BshNI | GGYRCC | 3 cut(s) | 251, 338, 441 |
| BsiEI | CGRYCG | 1 cut(s) | 108 |
| BsiHKAI | GWGCWC | 2 cut(s) | 36, 684 |
| BsiHKCI | CYCGRG | 1 cut(s) | 35 |
| BsiSI | CCGG | 3 cut(s) | 72, 246, 329 |
| BslFI | GGGAC | 1 cut(s) | 35 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 71, 74, 226, 277, 335, 348, 461, 745, 800 |
| BsmAI | GTCTC | 3 cut(s) | 338, 804, 879 |
| BsmFI | GGGAC | 1 cut(s) | 35 |
| BsmI | GAATGC | 1 cut(s) | 587 |
| BsnI | GGCC | 3 cut(s) | 107, 270, 365 |
| BsoBI | CYCGRG | 1 cut(s) | 35 |
| Bsp1286I | GDGCHC | 4 cut(s) | 36, 341, 525, 684 |
| Bsp143I | GATC | 3 cut(s) | 201, 625, 748 |
| BspACI | CCGC | 7 cut(s) | 75, 80, 134, 207, 249, 413, 883 |
| BspANI | GGCC | 3 cut(s) | 107, 270, 365 |
| BspCNI | CTCAG | 1 cut(s) | 508 |
| BspFNI | CGCG | 5 cut(s) | 80, 195, 215, 239, 241 |
| BspLI | GGNNCC | 5 cut(s) | 99, 253, 340, 443, 522 |
| BspMI | ACCTGC | 1 cut(s) | 970 |
| BspPI | GGATC | 2 cut(s) | 620, 756 |
| BspT107I | GGYRCC | 3 cut(s) | 251, 338, 441 |
| BsrFI | RCCGGY | 1 cut(s) | 328 |
| BsrI | ACTGG | 1 cut(s) | 426 |
| BssAI | RCCGGY | 1 cut(s) | 328 |
| BssECI | CCNNGG | 4 cut(s) | 27, 164, 360, 454 |
| BssHII | GCGCGC | 1 cut(s) | 239 |
| BssMI | GATC | 3 cut(s) | 201, 625, 748 |
| BssNI | GRCGYC | 3 cut(s) | 111, 297, 315 |
| Bst2UI | CCWGG | 3 cut(s) | 28, 362, 456 |
| Bst4CI | ACNGT | 4 cut(s) | 559, 686, 693, 973 |
| Bst6I | CTCTTC | 1 cut(s) | 790 |
| BstACI | GRCGYC | 3 cut(s) | 111, 297, 315 |
| BstC8I | GCNNGC | 3 cut(s) | 241, 470, 858 |
| BstDEI | CTNAG | 1 cut(s) | 495 |
| BstDSI | CCRYGG | 1 cut(s) | 164 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 275 |
| BstF5I | GGATG | 4 cut(s) | 10, 443, 470, 928 |
| BstFNI | CGCG | 5 cut(s) | 80, 195, 215, 239, 241 |
| BstHHI | GCGC | 6 cut(s) | 80, 139, 195, 217, 241, 243 |
| BstKTI | GATC | 3 cut(s) | 204, 628, 751 |
| BstMAI | GTCTC | 3 cut(s) | 338, 804, 879 |
| BstMBI | GATC | 3 cut(s) | 201, 625, 748 |
| BstMCI | CGRYCG | 1 cut(s) | 108 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 14, 160, 249 |
| BstNI | CCWGG | 3 cut(s) | 28, 362, 456 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 350 |
| BstSCI | CCNGG | 3 cut(s) | 26, 360, 454 |
| BstSLI | GKGCMC | 2 cut(s) | 341, 684 |
| BstUI | CGCG | 5 cut(s) | 80, 195, 215, 239, 241 |
| BstV2I | GAAGAC | 1 cut(s) | 98 |
| BstX2I | RGATCY | 2 cut(s) | 201, 748 |
| BstYI | RGATCY | 2 cut(s) | 201, 748 |
| BstZI | CGGCCG | 1 cut(s) | 105 |
| BsuRI | GGCC | 3 cut(s) | 107, 270, 365 |
| BtgI | CCRYGG | 1 cut(s) | 164 |
| BtsCI | GGATG | 4 cut(s) | 10, 443, 470, 928 |
| BtsIMutI | CAGTG | 2 cut(s) | 564, 682 |
| BveI | ACCTGC | 1 cut(s) | 970 |
| Cac8I | GCNNGC | 3 cut(s) | 241, 470, 858 |
| CaiI | CAGNNNCTG | 1 cut(s) | 563 |
| CfoI | GCGC | 6 cut(s) | 80, 139, 195, 217, 241, 243 |
| Cfr10I | RCCGGY | 1 cut(s) | 328 |
| Cfr13I | GGNCC | 3 cut(s) | 97, 268, 890 |
| CseI | GACGC | 4 cut(s) | 119, 184, 305, 323 |
| Csp6I | GTAC | 1 cut(s) | 442 |
| CviAII | CATG | 4 cut(s) | 265, 274, 310, 986 |
| CviQI | GTAC | 1 cut(s) | 442 |
| DdeI | CTNAG | 1 cut(s) | 495 |
| DpnI | GATC | 3 cut(s) | 203, 627, 750 |
| DpnII | GATC | 3 cut(s) | 201, 625, 748 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 100 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 100 |
| EaeI | YGGCCR | 1 cut(s) | 105 |
| EagI | CGGCCG | 1 cut(s) | 105 |
| Eam1104I | CTCTTC | 1 cut(s) | 790 |
| EarI | CTCTTC | 1 cut(s) | 790 |
| Ecl136II | GAGCTC | 1 cut(s) | 34 |
| EclXI | CGGCCG | 1 cut(s) | 105 |
| Eco24I | GRGCYC | 2 cut(s) | 36, 525 |
| Eco32I | GATATC | 1 cut(s) | 709 |
| Eco47I | GGWCC | 2 cut(s) | 97, 890 |
| Eco52I | CGGCCG | 1 cut(s) | 105 |
| Eco53kI | GAGCTC | 1 cut(s) | 34 |
| Eco57I | CTGAAG | 1 cut(s) | 242 |
| Eco88I | CYCGRG | 1 cut(s) | 35 |
| EcoICRI | GAGCTC | 1 cut(s) | 34 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 275 |
| EcoRII | CCWGG | 3 cut(s) | 26, 360, 454 |
| EcoRV | GATATC | 1 cut(s) | 709 |
| EcoT38I | GRGCYC | 2 cut(s) | 36, 525 |
| FaeI | CATG | 4 cut(s) | 268, 277, 313, 989 |
| FaqI | GGGAC | 1 cut(s) | 35 |
| FatI | CATG | 4 cut(s) | 264, 273, 309, 985 |
| FauI | CCCGC | 2 cut(s) | 406, 890 |
| Fnu4HI | GCNGC | 4 cut(s) | 76, 81, 135, 250 |
| FokI | GGATG | 4 cut(s) | 17, 450, 477, 935 |
| FriOI | GRGCYC | 2 cut(s) | 36, 525 |
| Fsp4HI | GCNGC | 4 cut(s) | 76, 81, 135, 250 |
| FspBI | CTAG | 2 cut(s) | 348, 951 |
| GlaI | GCGC | 6 cut(s) | 79, 138, 194, 216, 240, 242 |
| GluI | GCNGC | 4 cut(s) | 76, 81, 135, 250 |
| GsuI | CTGGAG | 3 cut(s) | 443, 603, 872 |
| HaeIII | GGCC | 3 cut(s) | 107, 270, 365 |
| HapII | CCGG | 3 cut(s) | 72, 246, 329 |
| HgaI | GACGC | 4 cut(s) | 119, 184, 305, 323 |
| HhaI | GCGC | 6 cut(s) | 80, 139, 195, 217, 241, 243 |
| Hin1I | GRCGYC | 3 cut(s) | 111, 297, 315 |
| Hin1II | CATG | 4 cut(s) | 268, 277, 313, 989 |
| Hin6I | GCGC | 6 cut(s) | 78, 137, 193, 215, 239, 241 |
| HinP1I | GCGC | 6 cut(s) | 78, 137, 193, 215, 239, 241 |
| HincII | GTYRAC | 2 cut(s) | 172, 577 |
| HindII | GTYRAC | 2 cut(s) | 172, 577 |
| HinfI | GANTC | 3 cut(s) | 734, 865, 929 |
| HpaI | GTTAAC | 1 cut(s) | 172 |
| HpaII | CCGG | 3 cut(s) | 72, 246, 329 |
| HphI | GGTGA | 3 cut(s) | 443, 783, 784 |
| Hpy166II | GTNNAC | 5 cut(s) | 172, 235, 577, 682, 689 |
| Hpy188I | TCNGA | 6 cut(s) | 498, 555, 637, 645, 835, 993 |
| Hpy8I | GTNNAC | 5 cut(s) | 172, 235, 577, 682, 689 |
| Hpy99I | CGWCG | 5 cut(s) | 106, 113, 131, 293, 299 |
| HpyAV | CCTTC | 2 cut(s) | 535, 913 |
| HpyCH4III | ACNGT | 4 cut(s) | 559, 686, 693, 973 |
| HpyCH4V | TGCA | 6 cut(s) | 277, 587, 682, 821, 962, 985 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 14, 160, 249 |
| HpyF3I | CTNAG | 1 cut(s) | 495 |
| Hsp92I | GRCGYC | 3 cut(s) | 111, 297, 315 |
| Hsp92II | CATG | 4 cut(s) | 268, 277, 313, 989 |
| HspAI | GCGC | 6 cut(s) | 78, 137, 193, 215, 239, 241 |
| KpnI | GGTACC | 1 cut(s) | 445 |
| KspAI | GTTAAC | 1 cut(s) | 172 |
| Kzo9I | GATC | 3 cut(s) | 201, 625, 748 |
| LmnI | GCTCC | 6 cut(s) | 31, 222, 248, 520, 853, 976 |
| LweI | GCATC | 2 cut(s) | 358, 455 |
| MaeI | CTAG | 2 cut(s) | 348, 951 |
| MaeIII | GTNAC | 2 cut(s) | 898, 996 |
| MalI | GATC | 3 cut(s) | 203, 627, 750 |
| MboI | GATC | 3 cut(s) | 201, 625, 748 |
| MboII | GAAGA | 6 cut(s) | 103, 109, 178, 235, 777, 938 |
| MflI | RGATCY | 2 cut(s) | 201, 748 |
| MhlI | GDGCHC | 4 cut(s) | 36, 341, 525, 684 |
| MluCI | AATT | 4 cut(s) | 512, 663, 828, 945 |
| MlyI | GAGTC | 1 cut(s) | 728 |
| MmeI | TCCRAC | 1 cut(s) | 415 |
| MseI | TTAA | 3 cut(s) | 171, 503, 657 |
| MslI | CAYNNNNRTG | 1 cut(s) | 308 |
| MspI | CCGG | 3 cut(s) | 72, 246, 329 |
| MspR9I | CCNGG | 3 cut(s) | 28, 362, 456 |
| Mva1269I | GAATGC | 1 cut(s) | 587 |
| MvaI | CCWGG | 3 cut(s) | 28, 362, 456 |
| MvnI | CGCG | 5 cut(s) | 80, 195, 215, 239, 241 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 14, 160, 249 |
| NdeII | GATC | 3 cut(s) | 201, 625, 748 |
| NlaIII | CATG | 4 cut(s) | 268, 277, 313, 989 |
| NlaIV | GGNNCC | 5 cut(s) | 99, 253, 340, 443, 522 |
| NmuCI | GTSAC | 1 cut(s) | 996 |
| PaeR7I | CTCGAG | 1 cut(s) | 35 |
| PaqCI | CACCTGC | 1 cut(s) | 970 |
| PauI | GCGCGC | 1 cut(s) | 239 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 303 |
| PctI | GAATGC | 1 cut(s) | 587 |
| PfeI | GAWTC | 2 cut(s) | 865, 929 |
| PflFI | GACNNNGTC | 1 cut(s) | 559 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 745 |
| PkrI | GCNGC | 4 cut(s) | 77, 82, 136, 251 |
| PleI | GAGTC | 1 cut(s) | 728 |
| PpsI | GAGTC | 1 cut(s) | 728 |
| PshAI | GACNNNNGTC | 1 cut(s) | 350 |
| Psp124BI | GAGCTC | 1 cut(s) | 36 |
| Psp6I | CCWGG | 3 cut(s) | 26, 360, 454 |
| PspGI | CCWGG | 3 cut(s) | 26, 360, 454 |
| PspN4I | GGNNCC | 5 cut(s) | 99, 253, 340, 443, 522 |
| PspPI | GGNCC | 3 cut(s) | 97, 268, 890 |
| PstNI | CAGNNNCTG | 1 cut(s) | 563 |
| PsuI | RGATCY | 2 cut(s) | 201, 748 |
| PsyI | GACNNNGTC | 1 cut(s) | 559 |
| PteI | GCGCGC | 1 cut(s) | 239 |
| RsaI | GTAC | 1 cut(s) | 443 |
| RsaNI | GTAC | 1 cut(s) | 442 |
| RseI | CAYNNNNRTG | 1 cut(s) | 308 |
| SacI | GAGCTC | 1 cut(s) | 36 |
| SaqAI | TTAA | 3 cut(s) | 171, 503, 657 |
| SatI | GCNGC | 4 cut(s) | 76, 81, 135, 250 |
| Sau3AI | GATC | 3 cut(s) | 201, 625, 748 |
| Sau96I | GGNCC | 3 cut(s) | 97, 268, 890 |
| SchI | GAGTC | 1 cut(s) | 728 |
| ScrFI | CCNGG | 3 cut(s) | 28, 362, 456 |
| SduI | GDGCHC | 4 cut(s) | 36, 341, 525, 684 |
| SetI | ASST | 9 cut(s) | 29, 36, 264, 744, 796, 844, 852, 984, 1005 |
| SfaNI | GCATC | 2 cut(s) | 358, 455 |
| Sfr274I | CTCGAG | 1 cut(s) | 35 |
| SinI | GGWCC | 2 cut(s) | 97, 890 |
| SlaI | CTCGAG | 1 cut(s) | 35 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 308 |
| SmlI | CTYRAG | 1 cut(s) | 35 |
| SmoI | CTYRAG | 1 cut(s) | 35 |
| Sse9I | AATT | 4 cut(s) | 512, 663, 828, 945 |
| SsiI | CCGC | 7 cut(s) | 75, 80, 134, 207, 249, 413, 883 |
| SspMI | CTAG | 2 cut(s) | 348, 951 |
| SstI | GAGCTC | 1 cut(s) | 36 |
| StyD4I | CCNGG | 3 cut(s) | 26, 360, 454 |
| TaaI | ACNGT | 4 cut(s) | 559, 686, 693, 973 |
| TaqI | TCGA | 4 cut(s) | 36, 258, 387, 543 |
| TaqII | GACCGA | 1 cut(s) | 302 |
| TasI | AATT | 4 cut(s) | 512, 663, 828, 945 |
| TauI | GCSGC | 4 cut(s) | 78, 83, 137, 252 |
| TfiI | GAWTC | 2 cut(s) | 865, 929 |
| Tru1I | TTAA | 3 cut(s) | 171, 503, 657 |
| Tru9I | TTAA | 3 cut(s) | 171, 503, 657 |
| TscAI | CASTG | 2 cut(s) | 564, 689 |
| TseFI | GTSAC | 1 cut(s) | 996 |
| Tsp45I | GTSAC | 1 cut(s) | 996 |
| TspDTI | ATGAA | 1 cut(s) | 939 |
| TspGWI | ACGGA | 2 cut(s) | 57, 110 |
| TspRI | CASTG | 2 cut(s) | 564, 689 |
| Tth111I | GACNNNGTC | 1 cut(s) | 559 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 745 |
| VneI | GTGCAC | 1 cut(s) | 680 |
| VpaK11BI | GGWCC | 2 cut(s) | 97, 890 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 275 |
| XapI | RAATTY | 1 cut(s) | 828 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 262, 307, 452 |
| XhoI | CTCGAG | 1 cut(s) | 35 |
| XspI | CTAG | 2 cut(s) | 348, 951 |