MD08G1145000.v1.1

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0008842
Physical Location & Seq
Forward (+)
14409053 .. 14416828
7776 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1145000.v1.1.491

Sequence Viewer

Length: 2556 bp
ATGACGAAGAAGAAGAACCCCTTTGTTTTTATGGATGTGTCCGTTGATGGCGATCCTTATGAAAGAATGGTTTTTGAGCTTTTCTCTGATGTTGCTCCCAAGACTGCAGAAAATTTTCGTGCTCTATGTACAGGAGAGCAGGGAATCGGTCCAAAAAGTAGAAAACCGCTGCACTACAAAGGGTCCTTTTTCCATCGTATTGTAAAAGGTTATAACGCACAGGGTGGCGATTTTGTGAAAAGAGATGGCACAGCTGGTGAAAGCATTTATGGCGAGAAGTTTCCAGATGAGTCACCTGTGCTCAAACACTCTGGACCTGGCCTTCTATCTATGCCTGTTGCTGTTCGTGACTCTTTAGGTTCTCATTTCAACATCACTTTTGCAGCTAATCGTAATCTTGACAGAAAGAATATAGTTTTTGGGAAGCTTGCACAAGGGCATGAGGTCCTGAAAAAGATTGAAAATGCGGGCGATGAAGATGGGAATCCAACTGTATTAGTTAAAGTGATCAATTGTGGCGAATATAACGAAGAGATAAAGAGAGCAAGTAAAGTGAAAGTTGGGAAGGATGCTTCTTCGGAAGCTAATAGTCATGAACTGAGGCGAAGGGTTAAACACAAAAAATCTTCTAAAGATAGAAGGAAGAGGAGGAGAAGGATATATGATTCATCTGAATCAGACAGTTCCTCAGATTCTGAATCTGAGTCATCTGAGTCAGATAGTGAGTCTGACTCAGATGTGTCCTCATCATCTTATGCTAGTTCTTCAAGTGATGACAGGCATAAGAAAAGAAAGAGATCTTCTAAAAGAGACAAGCATAGACGTGGAAAGAGGCGGGATAAAAGGCGTGACAAAAAGCGAAGGCGGCATGATAAGAAATCTAAGATCAGATCAAAAAGGGCATCACATGGTCATACTGATTCTGAGAGTGAAATTAAAAGTGAAAGTAGCTGTGAAGATGATGGCCTTGACGCCAAAAGGAAGGATCAAAAGTCTAAGAAGGACATCTCTGAAAAATCTGGCGAAGGTGATGCTTCAATCTACCTTACGAAGAGGGAGGAAGCTGAAGTGCTTGTGAAAGACGGTGCATATCCTAAGGAGAATGGAGATCAGCAGAGCAATGGACTTGCAGGTGGTAAATATGACAAAAGTGCAGATAGACAGCCTGACATAGTTGATGATCACCCAGGCAAATCTAGGAGCCGAAGCTTCAGTCCTAAGAGGGCCATGAGTAAGAGTATGAGTATTAGTCCCAGGAGGAGTCCGACCAAGAGCCCAAGTTTAAGTCGCAAACGGAGTGAGAGCAGGAGTTCGAGTGTTAGTAGAAGCCCTCCTCCTCCCCCTCAAAGGAGCAGGAGCATCAGCAGGAGTCCTGTTAGAAGCGATAGCAGTAGAAGCCCAGCCAGAGGTTTCAACAAAAGACCAATGAAGGGCTGGAAGGGTAGGAGTCCAGTGAAAGCCCGGTCTCAAAGAAGCATAAGCAGGAGCCCACCATATGGCAGAAGCCCAGTAAAAGTTCCAAGAAGCATAAGCGGAAGTCCACCTAGAAAACCACCACATAAATCAATTAGCAGAAGCCCTGCCAGAGCTTCAAGCACAAGCAGAAGTCCACCAAGAAAATCATTGCACAAATCAAATAGTAGAAGCCCTGTAAGAGTTTCAAGAAGCAGAAGCCCAGTTATATCTTCTCGAAGGAGAGCAAGCAAAAGCCCTGTAAGAGTCTCAAGAACTAGAAGCCCAGTTAGATCTTCTCGAAGGAGTGCAAGCAGAAGCCCTGTAAGAGTATCAAGAAGCAGAAGCCCAGTTAGATCTTCTCGAAGGAGTGCAAGCAGAAGTTCAGGTAGGTTTCGTTCTAGGAAAACTGCTAGCCGCAGTCCGCTGAGGGCCCCAAGCGGGAATAACCATCGCAGCTATTCAAGGAGTCCTAGCCCAGTAGCGCGTAGGGTAAGGTCGCCTTTATCACCAGATCGGGGGAGGAGCTTGTCAAGAAGTGTTTCACCTGATGCCTCACCAAAGCGCGTTAGAAGAGGACGGGGTTTCAGTCAGCGGTACTCTTATGCACGGAGGTACAGAACCCCTTCTTTGTCTCCTCCTGTGAGATCTTATCGTTATGGTGGTGGTCGAAGTGATCGTGACAGGTATTCAAGTTATAGAAGGTCCAGGTATTCTCCGAGGCGCTATAGAAGCCCACCAAGAAGAACACCTCCTAGATACAGAAGCAGAAGAAGCAGAAGTCCAGTATCACGCAGCCCTCGTTACCGCAGCCGAAACTATAGTCGTAGCAGTAGCCCCATCAGGAGTCGTAGCCCAGTGCGAAGTCGTAGCCCCATTCAGAGCCGCAGTCGTTCTCCAGTGGAGGTGGGTAGATCACACGTCTCTCCTCGGGTTGAGAGGGCAAGATCTTCATCAAGAAGCAGAAGCCCATCAAGGTCGAGATCAAGGTCCTCATTGGATTCCAGATCCCCAATTCGGACGGGCAAAAGCAGGTCCAGGTCATCGTCAGGAAGCCCAAAAGGGAAGAAGGGCCTGGTTTCGTACGATGATGTTTCCCCTTAG

Protein Analysis

852

Amino Acids

95.74

Weight (kDa)

11.58

Isoelectric Point (pI)

122.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 11 - 173 2.4e-35 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 213
AarI CACCTGC 1 cut(s) 1121
Acc36I ACCTGC 2 cut(s) 1121, 2475
AccB7I CCANNNNNTGG 1 cut(s) 1496
AccII CGCG 2 cut(s) 1939, 2019
AclWI GGATC 3 cut(s) 47, 993, 2454
AcsI RAATTY 1 cut(s) 112
AcuI CTGAAG 2 cut(s) 1086, 1195
AcyI GRCGYC 1 cut(s) 972
AdeI CACNNNGTG 1 cut(s) 224
AfaI GTAC 4 cut(s) 130, 2051, 2069, 2537
AfiI CCNNNNNNNGG 7 cut(s) 1347, 1406, 1430, 1496, 1893, 1970, 2469
AflIII ACRYGT 1 cut(s) 2371
AgsI TTSAA 9 cut(s) 370, 461, 768, 1038, 1414, 1593, 1662, 1917, 2145
AjiI CACGTC 2 cut(s) 824, 2374
AjnI CCWGG 6 cut(s) 316, 1186, 1253, 2159, 2489, 2526
Alw21I GWGCWC 2 cut(s) 124, 303
Alw26I GTCTC 5 cut(s) 804, 1470, 1726, 2091, 2380
AlwI GGATC 3 cut(s) 47, 993, 2454
AlwNI CAGNNNCTG 1 cut(s) 695
Ama87I CYCGRG 1 cut(s) 2382
AoxI GGCC 5 cut(s) 319, 964, 1224, 1884, 2524
ApaI GGGCCC 1 cut(s) 1888
ApeKI GCWGC 5 cut(s) 169, 383, 1908, 2247, 2262
ApoI RAATTY 1 cut(s) 112
ArsI GACNNNNNNTTYG 4 cut(s) 1198, 1230, 2260, 2292
Asp700I GAANNNNTTC 3 cut(s) 114, 1993, 2077
AspLEI GCGC 3 cut(s) 1939, 2019, 2178
AsuC2I CCSGG 1 cut(s) 1462
AsuHPI GGTGA 7 cut(s) 269, 285, 1040, 1175, 1953, 1989, 2001
AsuNHI GCTAGC 1 cut(s) 1865
AvaI CYCGRG 1 cut(s) 2382
AvaII GGWCC 7 cut(s) 149, 183, 314, 445, 2157, 2442, 2487
AxyI CCTNAGG 1 cut(s) 1095
BaeGI GKGCMC 1 cut(s) 1888
BanII GRGCYC 3 cut(s) 1277, 1490, 1888
Bbv12I GWGCWC 2 cut(s) 124, 303
BbvCI CCTCAGC 1 cut(s) 1880
BbvI GCAGC 5 cut(s) 156, 395, 1920, 2259, 2274
BccI CCATC 8 cut(s) 41, 201, 239, 473, 956, 1911, 2300, 2431
BcgI CGANNNNNNTGC 2 cut(s) 1013, 1047
BciT130I CCWGG 6 cut(s) 318, 1188, 1255, 2161, 2491, 2528
BclI TGATCA 2 cut(s) 507, 1180
BcnI CCSGG 1 cut(s) 1462
BcoDI GTCTC 5 cut(s) 804, 1470, 1726, 2091, 2380
BfaI CTAG 8 cut(s) 759, 1197, 1545, 1731, 1854, 1866, 1926, 2208
BfmI CTRYAG 3 cut(s) 105, 2179, 2272
BfoI RGCGCY 1 cut(s) 2179
BfuAI ACCTGC 2 cut(s) 1121, 2475
BglII AGATCT 5 cut(s) 797, 1745, 1808, 2099, 2399
BisI GCNGC 8 cut(s) 170, 384, 866, 1870, 1909, 2248, 2263, 2338
BlsI GCNGC 8 cut(s) 171, 385, 867, 1871, 1910, 2249, 2264, 2339
Bme1390I CCNGG 7 cut(s) 318, 1188, 1255, 1462, 2161, 2491, 2528
Bme18I GGWCC 7 cut(s) 149, 183, 314, 445, 2157, 2442, 2487
BmeT110I CYCGRG 1 cut(s) 2382
BmgBI CACGTC 2 cut(s) 824, 2374
BmiI GGNNCC 5 cut(s) 184, 1202, 1487, 1886, 1887
BmrFI CCNGG 7 cut(s) 318, 1188, 1255, 1462, 2161, 2491, 2528
BmrI ACTGGG 6 cut(s) 1502, 1670, 1733, 1796, 1925, 2303
BmsI GCATC 5 cut(s) 559, 911, 1021, 1368, 1993
BmtI GCTAGC 1 cut(s) 1869
BmuI ACTGGG 6 cut(s) 1502, 1670, 1733, 1796, 1925, 2303
BplI GAGNNNNNCTC 4 cut(s) 68, 100, 716, 748
BpmI CTGGAG 1 cut(s) 2334
Bpu10I CCTNAGC 1 cut(s) 1880
BpuEI CTTGAG 1 cut(s) 1708
BpuMI CCSGG 1 cut(s) 1462
BsaBI GATNNNNATC 3 cut(s) 51, 483, 2404
BsaHI GRCGYC 1 cut(s) 972
BsaI GGTCTC 1 cut(s) 1470
BsaJI CCNNGG 4 cut(s) 1186, 1253, 2171, 2381
BsaXI ACNNNNNCTCC 2 cut(s) 1300, 1330
Bsc4I CCNNNNNNNGG 7 cut(s) 1347, 1406, 1430, 1496, 1893, 1970, 2469
Bse1I ACTGG 9 cut(s) 1451, 1508, 1676, 1739, 1802, 1931, 2237, 2309, 2351
Bse21I CCTNAGG 1 cut(s) 1095
Bse3DI GCAATG 2 cut(s) 1126, 1622
Bse8I GATNNNNATC 3 cut(s) 51, 483, 2404
BseBI CCWGG 6 cut(s) 318, 1188, 1255, 2161, 2491, 2528
BseDI CCNNGG 4 cut(s) 1186, 1253, 2171, 2381
BseGI GGATG 2 cut(s) 40, 574
BseJI GATNNNNATC 3 cut(s) 51, 483, 2404
BseLI CCNNNNNNNGG 7 cut(s) 1347, 1406, 1430, 1496, 1893, 1970, 2469
BseMI GCAATG 2 cut(s) 1126, 1622
BseMII CTCAG 7 cut(s) 590, 693, 702, 702, 747, 915, 1871
BseNI ACTGG 9 cut(s) 1451, 1508, 1676, 1739, 1802, 1931, 2237, 2309, 2351
BseRI GAGGAG 8 cut(s) 661, 664, 1273, 1323, 1326, 1990, 2079, 2370
BseSI GKGCMC 1 cut(s) 1888
BseXI GCAGC 5 cut(s) 156, 395, 1920, 2259, 2274
BseYI CCCAGC 1 cut(s) 1399
BsgI GTGCAG 2 cut(s) 155, 1173
Bsh1236I CGCG 2 cut(s) 1939, 2019
BshFI GGCC 5 cut(s) 321, 966, 1226, 1886, 2526
BsiHKAI GWGCWC 2 cut(s) 124, 303
BsiHKCI CYCGRG 1 cut(s) 2382
BsiSI CCGG 1 cut(s) 1462
BsiWI CGTACG 1 cut(s) 2535
BslFI GGGAC 1 cut(s) 1236
BslI CCNNNNNNNGG 7 cut(s) 1347, 1406, 1430, 1496, 1893, 1970, 2469
BsmAI GTCTC 5 cut(s) 804, 1470, 1726, 2091, 2380
BsmBI CGTCTC 1 cut(s) 2380
BsmFI GGGAC 1 cut(s) 1236
BsnI GGCC 5 cut(s) 321, 966, 1226, 1886, 2526
Bso31I GGTCTC 1 cut(s) 1470
BsoBI CYCGRG 1 cut(s) 2382
Bsp120I GGGCCC 1 cut(s) 1884
Bsp1286I GDGCHC 5 cut(s) 124, 303, 1277, 1490, 1888
Bsp1407I TGTACA 1 cut(s) 128
BspANI GGCC 5 cut(s) 321, 966, 1226, 1886, 2526
BspCNI CTCAG 7 cut(s) 591, 694, 701, 703, 746, 916, 1872
BspFNI CGCG 2 cut(s) 1939, 2019
BspHI TCATGA 1 cut(s) 592
BspLI GGNNCC 5 cut(s) 184, 1202, 1487, 1886, 1887
BspMAI CTGCAG 1 cut(s) 109
BspMI ACCTGC 2 cut(s) 1121, 2475
BspOI GCTAGC 1 cut(s) 1869
BspPI GGATC 3 cut(s) 47, 993, 2454
BspTNI GGTCTC 1 cut(s) 1470
BsrDI GCAATG 2 cut(s) 1126, 1622
BsrGI TGTACA 1 cut(s) 128
BsrI ACTGG 9 cut(s) 1451, 1508, 1676, 1739, 1802, 1931, 2237, 2309, 2351
BssECI CCNNGG 4 cut(s) 1186, 1253, 2171, 2381
BssNI GRCGYC 1 cut(s) 972
Bst2UI CCWGG 6 cut(s) 318, 1188, 1255, 2161, 2491, 2528
Bst4CI ACNGT 3 cut(s) 493, 683, 1085
Bst6I CTCTTC 4 cut(s) 525, 638, 1046, 2020
BstACI GRCGYC 1 cut(s) 972
BstAUI TGTACA 1 cut(s) 128
BstC8I GCNNGC 6 cut(s) 429, 469, 1702, 1765, 1828, 1867
BstF5I GGATG 2 cut(s) 40, 574
BstFNI CGCG 2 cut(s) 1939, 2019
BstH2I RGCGCY 1 cut(s) 2179
BstHHI GCGC 3 cut(s) 1939, 2019, 2178
BstMAI GTCTC 5 cut(s) 804, 1470, 1726, 2091, 2380
BstMWI GCNNNNNNNGC 5 cut(s) 270, 865, 1395, 2184, 2226
BstNI CCWGG 6 cut(s) 318, 1188, 1255, 2161, 2491, 2528
BstSCI CCNGG 7 cut(s) 316, 1186, 1253, 1460, 2159, 2489, 2526
BstSFI CTRYAG 3 cut(s) 105, 2179, 2272
BstSLI GKGCMC 1 cut(s) 1888
BstUI CGCG 2 cut(s) 1939, 2019
BstV1I GCAGC 5 cut(s) 156, 395, 1920, 2259, 2274
BstX2I RGATCY 6 cut(s) 797, 1745, 1808, 2099, 2399, 2459
BstYI RGATCY 6 cut(s) 797, 1745, 1808, 2099, 2399, 2459
Bsu36I CCTNAGG 1 cut(s) 1095
BsuRI GGCC 5 cut(s) 321, 966, 1226, 1886, 2526
BtgZI GCGATG 2 cut(s) 486, 1889
BtrI CACGTC 2 cut(s) 824, 2374
BtsCI GGATG 2 cut(s) 40, 574
BtsIMutI CAGTG 3 cut(s) 1458, 2316, 2358
BveI ACCTGC 2 cut(s) 1121, 2475
Cac8I GCNNGC 6 cut(s) 429, 469, 1702, 1765, 1828, 1867
CaiI CAGNNNCTG 1 cut(s) 695
CciI TCATGA 1 cut(s) 592
CfoI GCGC 3 cut(s) 1939, 2019, 2178
CseI GACGC 1 cut(s) 980
Csp6I GTAC 4 cut(s) 129, 2050, 2068, 2536
CviAII CATG 5 cut(s) 440, 593, 869, 908, 1228
CviQI GTAC 4 cut(s) 129, 2050, 2068, 2536
DraIII CACNNNGTG 1 cut(s) 224
Eam1104I CTCTTC 4 cut(s) 525, 638, 1046, 2020
EarI CTCTTC 4 cut(s) 525, 638, 1046, 2020
Eco24I GRGCYC 3 cut(s) 1277, 1490, 1888
Eco31I GGTCTC 1 cut(s) 1470
Eco47I GGWCC 7 cut(s) 149, 183, 314, 445, 2157, 2442, 2487
Eco57I CTGAAG 2 cut(s) 1086, 1195
Eco81I CCTNAGG 1 cut(s) 1095
Eco88I CYCGRG 1 cut(s) 2382
EcoO109I RGGNCCY 6 cut(s) 183, 445, 1884, 1885, 2442, 2524
EcoRII CCWGG 6 cut(s) 316, 1186, 1253, 2159, 2489, 2526
EcoT38I GRGCYC 3 cut(s) 1277, 1490, 1888
Esp3I CGTCTC 1 cut(s) 2380
FaeI CATG 5 cut(s) 443, 596, 872, 911, 1231
FalI AAGNNNNNCTT 3 cut(s) 37, 1939, 1971
FaqI GGGAC 1 cut(s) 1236
FatI CATG 5 cut(s) 439, 592, 868, 907, 1227
FauI CCCGC 3 cut(s) 460, 828, 1886
FauNDI CATATG 1 cut(s) 1495
FbaI TGATCA 2 cut(s) 507, 1180
Fnu4HI GCNGC 8 cut(s) 170, 384, 866, 1870, 1909, 2248, 2263, 2338
FokI GGATG 2 cut(s) 47, 581
FriOI GRGCYC 3 cut(s) 1277, 1490, 1888
Fsp4HI GCNGC 8 cut(s) 170, 384, 866, 1870, 1909, 2248, 2263, 2338
FspBI CTAG 8 cut(s) 759, 1197, 1545, 1731, 1854, 1866, 1926, 2208
GlaI GCGC 3 cut(s) 1938, 2018, 2177
GluI GCNGC 8 cut(s) 170, 384, 866, 1870, 1909, 2248, 2263, 2338
GsaI CCCAGC 1 cut(s) 1403
GsuI CTGGAG 1 cut(s) 2334
HaeII RGCGCY 1 cut(s) 2179
HaeIII GGCC 5 cut(s) 321, 966, 1226, 1886, 2526
HapII CCGG 1 cut(s) 1462
HgaI GACGC 1 cut(s) 980
HhaI GCGC 3 cut(s) 1939, 2019, 2178
Hin1I GRCGYC 1 cut(s) 972
Hin1II CATG 5 cut(s) 443, 596, 872, 911, 1231
Hin6I GCGC 3 cut(s) 1937, 2017, 2176
HinP1I GCGC 3 cut(s) 1937, 2017, 2176
HindIII AAGCTT 2 cut(s) 425, 1207
HpaII CCGG 1 cut(s) 1462
HphI GGTGA 7 cut(s) 269, 285, 1040, 1175, 1953, 1989, 2001
Hpy166II GTNNAC 2 cut(s) 1541, 1610
Hpy8I GTNNAC 2 cut(s) 1541, 1610
HpyCH4III ACNGT 3 cut(s) 493, 683, 1085
HpyCH4IV ACGT 2 cut(s) 823, 2373
HpyF10VI GCNNNNNNNGC 5 cut(s) 270, 865, 1395, 2184, 2226
HpySE526I ACGT 2 cut(s) 823, 2373
Hsp92I GRCGYC 1 cut(s) 972
Hsp92II CATG 5 cut(s) 443, 596, 872, 911, 1231
HspAI GCGC 3 cut(s) 1937, 2017, 2176
Ksp22I TGATCA 2 cut(s) 507, 1180
LmnI GCTCC 6 cut(s) 100, 1200, 1350, 1356, 1485, 1977
Lsp1109I GCAGC 5 cut(s) 156, 395, 1920, 2259, 2274
LweI GCATC 5 cut(s) 559, 911, 1021, 1368, 1993
MaeI CTAG 8 cut(s) 759, 1197, 1545, 1731, 1854, 1866, 1926, 2208
MaeII ACGT 2 cut(s) 823, 2373
MaeIII GTNAC 5 cut(s) 291, 347, 848, 2132, 2255
MfeI CAATTG 1 cut(s) 511
MflI RGATCY 6 cut(s) 797, 1745, 1808, 2099, 2399, 2459
MhlI GDGCHC 5 cut(s) 124, 303, 1277, 1490, 1888
MluCI AATT 5 cut(s) 112, 511, 933, 1566, 2466
MmeI TCCRAC 2 cut(s) 512, 1289
MroXI GAANNNNTTC 3 cut(s) 114, 1993, 2077
MseI TTAA 4 cut(s) 501, 612, 936, 1283
MslI CAYNNNNRTG 1 cut(s) 822
MspA1I CMGCKG 4 cut(s) 169, 254, 1879, 2047
MspI CCGG 1 cut(s) 1462
MspR9I CCNGG 7 cut(s) 318, 1188, 1255, 1462, 2161, 2491, 2528
MunI CAATTG 1 cut(s) 511
MvaI CCWGG 6 cut(s) 318, 1188, 1255, 2161, 2491, 2528
MvnI CGCG 2 cut(s) 1939, 2019
MwoI GCNNNNNNNGC 5 cut(s) 270, 865, 1395, 2184, 2226
NciI CCSGG 1 cut(s) 1462
NdeI CATATG 1 cut(s) 1495
NheI GCTAGC 1 cut(s) 1865
NlaIII CATG 5 cut(s) 443, 596, 872, 911, 1231
NlaIV GGNNCC 5 cut(s) 184, 1202, 1487, 1886, 1887
NmuCI GTSAC 4 cut(s) 291, 347, 848, 2132
PagI TCATGA 1 cut(s) 592
PaqCI CACCTGC 1 cut(s) 1121
PcsI WCGNNNNNNNCGW 2 cut(s) 2128, 2251
PdmI GAANNNNTTC 3 cut(s) 114, 1993, 2077
PfeI GAWTC 8 cut(s) 144, 484, 665, 674, 692, 698, 920, 2453
Pfl23II CGTACG 1 cut(s) 2535
PflMI CCANNNNNTGG 1 cut(s) 1496
PkrI GCNGC 8 cut(s) 171, 385, 867, 1871, 1910, 2249, 2264, 2339
PpuMI RGGWCCY 3 cut(s) 183, 445, 2442
PsiI TTATAA 1 cut(s) 213
Psp5II RGGWCCY 3 cut(s) 183, 445, 2442
Psp6I CCWGG 6 cut(s) 316, 1186, 1253, 2159, 2489, 2526
PspFI CCCAGC 1 cut(s) 1399
PspGI CCWGG 6 cut(s) 316, 1186, 1253, 2159, 2489, 2526
PspLI CGTACG 1 cut(s) 2535
PspN4I GGNNCC 5 cut(s) 184, 1202, 1487, 1886, 1887
PspOMI GGGCCC 1 cut(s) 1884
PspPPI RGGWCCY 3 cut(s) 183, 445, 2442
PsrI GAACNNNNNNTAC 2 cut(s) 1834, 1866
PstI CTGCAG 1 cut(s) 109
PstNI CAGNNNCTG 1 cut(s) 695
PsuI RGATCY 6 cut(s) 797, 1745, 1808, 2099, 2399, 2459
PvuII CAGCTG 1 cut(s) 254
RsaI GTAC 4 cut(s) 130, 2051, 2069, 2537
RsaNI GTAC 4 cut(s) 129, 2050, 2068, 2536
RseI CAYNNNNRTG 1 cut(s) 822
SaqAI TTAA 4 cut(s) 501, 612, 936, 1283
SatI GCNGC 8 cut(s) 170, 384, 866, 1870, 1909, 2248, 2263, 2338
ScrFI CCNGG 7 cut(s) 318, 1188, 1255, 1462, 2161, 2491, 2528
SduI GDGCHC 5 cut(s) 124, 303, 1277, 1490, 1888
SfaNI GCATC 5 cut(s) 559, 911, 1021, 1368, 1993
SfcI CTRYAG 3 cut(s) 105, 2179, 2272
SinI GGWCC 7 cut(s) 149, 183, 314, 445, 2157, 2442, 2487
SmiMI CAYNNNNRTG 1 cut(s) 822
SmlI CTYRAG 1 cut(s) 1723
SmoI CTYRAG 1 cut(s) 1723
Sse9I AATT 5 cut(s) 112, 511, 933, 1566, 2466
SspMI CTAG 8 cut(s) 759, 1197, 1545, 1731, 1854, 1866, 1926, 2208
StyD4I CCNGG 7 cut(s) 316, 1186, 1253, 1460, 2159, 2489, 2526
TaaI ACNGT 3 cut(s) 493, 683, 1085
TaiI ACGT 2 cut(s) 826, 2376
TaqI TCGA 6 cut(s) 1313, 1690, 1753, 1816, 2122, 2432
TaqII GACCGA 1 cut(s) 137
TasI AATT 5 cut(s) 112, 511, 933, 1566, 2466
TatI WGTACW 1 cut(s) 128
TauI GCSGC 3 cut(s) 868, 1872, 2340
TfiI GAWTC 8 cut(s) 144, 484, 665, 674, 692, 698, 920, 2453
Tru1I TTAA 4 cut(s) 501, 612, 936, 1283
Tru9I TTAA 4 cut(s) 501, 612, 936, 1283
TscAI CASTG 3 cut(s) 1458, 2316, 2358
TseFI GTSAC 4 cut(s) 291, 347, 848, 2132
TseI GCWGC 5 cut(s) 169, 383, 1908, 2247, 2262
Tsp45I GTSAC 4 cut(s) 291, 347, 848, 2132
TspDTI ATGAA 6 cut(s) 75, 489, 609, 657, 1442, 2394
TspGWI ACGGA 3 cut(s) 31, 1309, 2077
TspRI CASTG 3 cut(s) 1458, 2316, 2358
Van91I CCANNNNNTGG 1 cut(s) 1496
VpaK11BI GGWCC 7 cut(s) 149, 183, 314, 445, 2157, 2442, 2487
XapI RAATTY 1 cut(s) 112
XcmI CCANNNNNNNNNTGG 1 cut(s) 1431
XmnI GAANNNNTTC 3 cut(s) 114, 1993, 2077
XspI CTAG 8 cut(s) 759, 1197, 1545, 1731, 1854, 1866, 1926, 2208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.