Rroxscaffold_7G00169500

Peptidyl-prolyl cis-trans isomerase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0008842
Physical Location & Seq
Forward (+)
10108296 .. 10115515
7220 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00169500.1

Sequence Viewer

Length: 2550 bp
ATGGAAAGCACAACGGGCCAACGGGGCTACAGTTTGAACCAGAAAATAAAGCGGAGATGTGTTGTTAGTTCAGCTGGATGCTGTGATTTTCATGTTCTAGGCATGCATTTGATTTTAGGGTTTGTGGATATTCGACTAGCCTCAACATTTGCTGATCTGAGTTTGCTGTACATGATTGAAGCCCGTAGACAAAGGAATATGGCGAAGAAGAAGAATCCCTTGGTGTTTATGGATGTGTGCATTGATGGAGATCCTGCTGAAAAGATGATTTTTGAGCTTTTCTATGACCGTGCTCCCAAGACTGCCGATAATTTCCGTGCTCTCTGTACAGGTGAAAAGGGAATTGGTCCAAAGAGTGGGAGACCACTACACTACAAAGGGTCTTTCTTCCATCGCATTGTAAAAGGTTACTATGCCCAGGATACAGGGCTGACGGTCACGACTGCTTTTCTTGGTGGTGATTTTGTCAAAAGGGATGGCACTGGTGGTGAAAGCATTTACAGTGAGGAGGAGTTTCCAGCTAACTTTGCTTCAGATGAGTCGTCCAAGCTAAAACACAACGGACCTGGACTTCTTTCTATGCCTGTTGCTGTTCGTGACTCTCTAGGTTCTCAGTTCATTATCACCTTTGAAGCTAATCATAGTCTAGACAGAAAGCATGTCATTTTTGGGAAGCTAACACATGGATGGGGCGTTTTGAAAAGAATAGAAAATGCGGGTGATGTAGATGGGAATCCAACTGTGACAGTGAAAGTCATCAACTGTGGTGAATATAGTGAAGACAAAAAGAAAGTAAAAGGGGCAAAGGAAGCTTCTTCAGATGCTGATAGTCATGAAGTGAAGCGTAAGGGAAAGCACAAGAAATCTTCAAGAGATAGAAGGAAGAGGAGGAAAAGGAGATACGAATATGATTCATCGACATCTGAGAGTGACTCGGATTCTGAATTGGATTCATCTGAATCTGATAGTGATTCTGACTCTGATTTGTCCTCATCCTCTTATGACAGTTCTTCAAGTGATGACAGGCGTAAGAAAAGAAAGAGGTCTTATAAAAGAGACAAGTATAAACGTGCAAAAAGGCGGGATAAAGGACGAGACAAAAAGCGTAGACGGCGTGATAAGAGATCTAAGATCAGATCAAGAAGGGCCTCAGAAAGCCTTACAGATACCGAGGGTGACAGTAACCCTGAAGATGATGGTCTTAATGCAGAAAGGAAGGATAAGAAGTCTAAAAAGGAGACCTCTCAGAAAGCTGCTGGGAACCAATCTTCTATTGCAGTGGATGGAGATGCTTCTTCAATTCACCATAAAAAGAGGGAGCAAGAAATTGTGCTTGAGAAAGATAGTGGATTTCCCAAGGAGAACGGAGAGCAGCGGAGCAATGGCGTGCGAACAGATGCTAAATATGACAAAATTGCAGACAGGCAACCGGACATAGTTGATGATCACCCAGGCAAATCTAGGAGCCGAAGCTTGAGTCCTAAAAGGATCCTGAGTAAGAGTATGAGTATTAGTCCCAGGAGGAGTCCGATCAATAGTCCAAGTGTAAGTCCCAAGAGCCAGAGTTTGAGTGTTAGTAGAAGCCCTCCTCGGGCCCCTCAAAGGAGTAGAAGCATCAGCAGGAGTCCTCTTAAAAGTGATAGCAGTAGAAGCCCAGCAAGAAGTTTCAGCAGGAGTCCAGTGAAGAGTTGGAGGGGTAGGAGCCCAGTTAAATCCCGGTCTCAAAGAACTATTAGCAATAGTCCTGCATCCCTACCCAGACGAAGTGTTAGCCCAAGCCCTCCTAGAAAAGTATCCAAAAAATCAATGAGCAGAAGCCCTGTGAGATTTTCAAGAAGCCGAAGCCCTGCCAGATCTTCTCGAAGGAGTGCAAGTAGAAGCTCAGGTAGGGTTGCTAATCGGAAAAACATTAGCCGCAGTCCTGTCAGGCCGGTGAGTGGGAATAACCGTCGCAGCTACTCAAGGAGTCGAAGCCCAGTACGTCGGGCTAGATCACCTCCATCTGATAGGGATAGGAGCTTGTCAAGAAGTGTTTCACCCGATGGCTCACCCAAGCGCATTAGAAGGGGACGGGGTTTCAGCCAGCGGTACTCTTATGCACGGCGGTACAGAACTCCTTCATTATCTCCTGTGAGACCATATCGTTATGGAGGTCGAAGTGATCGTGACAGGTATTCAAGTTATAGAAGGTACTCACCGAGGCGTTATAGAAGCCCACCAAGAGCAAGAACACCTCTGAGATACAGGAGCAGAAGAACCAGGTCTCCTGTATCACGTAGCCCCCGTCGTGGTCACCGCTACAGTAGGAGCCGTAGCCCCATCCGGAGCCGCAGTCCCATCCGAAGTCGTTCTCGTTCCCCAGTGGAGGTGGCTGCTCGGGTTGTGAAGCGCAGATCTCCTTCAAGAAGCAGGAGCCCATCAGCTTCAAGGTCCTCAGACTCACAATCTCCAAGGCAGGTGAGCAAAAACAAATCAAGGTCTTCGTCGGAGAGTCCAAATGAGAAGAAGGGCCTGGTTTCTTATGGTGATGGTTCCCCGGACTCAGAGTGA

Protein Analysis

849

Amino Acids

95.83

Weight (kDa)

11.05

Isoelectric Point (pI)

104.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pro_isomerase PF00160 80 - 256 1.8e-31 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1050
AarI CACCTGC 1 cut(s) 2446
Acc36I ACCTGC 1 cut(s) 2446
AccB7I CCANNNNNTGG 1 cut(s) 356
AccI GTMKAC 2 cut(s) 187, 1108
AccIII TCCGGA 1 cut(s) 2322
AciI CCGC 9 cut(s) 52, 716, 1081, 1375, 1915, 2086, 2104, 2296, 2329
AclWI GGATC 3 cut(s) 245, 1483, 1496
AcuI CTGAAG 3 cut(s) 516, 801, 1209
AfaI GTAC 6 cut(s) 170, 328, 1980, 2090, 2108, 2192
AfiI CCNNNNNNNGG 6 cut(s) 356, 1591, 1602, 1937, 2288, 2365
AjnI CCWGG 6 cut(s) 417, 565, 1450, 1517, 2258, 2511
AjuI GAANNNNNNNTTGG 4 cut(s) 203, 235, 327, 359
AloI GAACNNNNNNTCC 2 cut(s) 2248, 2280
Alw21I GWGCWC 2 cut(s) 295, 322
Alw26I GTCTC 7 cut(s) 355, 1050, 1089, 1232, 1725, 2128, 2268
AlwI GGATC 3 cut(s) 245, 1483, 1496
AlwNI CAGNNNCTG 1 cut(s) 824
Ama87I CYCGRG 2 cut(s) 1590, 2376
Aor13HI TCCGGA 1 cut(s) 2322
AoxI GGCC 5 cut(s) 16, 1146, 1593, 1928, 2509
ApaI GGGCCC 1 cut(s) 1597
ApeKI GCWGC 4 cut(s) 1253, 1372, 1953, 2372
ArsI GACNNNNNNTTYG 2 cut(s) 1462, 1494
Asp700I GAANNNNTTC 3 cut(s) 2032, 2116, 2347
AspLEI GCGC 2 cut(s) 2058, 2391
AspS9I GGNCC 8 cut(s) 16, 347, 563, 1146, 1593, 1594, 2430, 2509
AsuC2I CCSGG 2 cut(s) 1717, 2537
AvaI CYCGRG 2 cut(s) 1590, 2376
AvaII GGWCC 3 cut(s) 347, 563, 2430
BaeGI GKGCMC 1 cut(s) 1597
BamHI GGATCC 1 cut(s) 1488
BanII GRGCYC 3 cut(s) 1597, 1706, 2417
BbsI GAAGAC 2 cut(s) 786, 2472
Bbv12I GWGCWC 2 cut(s) 295, 322
BbvI GCAGC 4 cut(s) 1240, 1384, 1965, 2359
BceAI ACGGC 3 cut(s) 1127, 2117, 2295
BciT130I CCWGG 6 cut(s) 419, 567, 1452, 1519, 2260, 2513
BciVI GTATCC 2 cut(s) 415, 1804
BclI TGATCA 1 cut(s) 1444
BcnI CCSGG 2 cut(s) 1717, 2537
BcoDI GTCTC 7 cut(s) 355, 1050, 1089, 1232, 1725, 2128, 2268
BfaI CTAG 7 cut(s) 98, 137, 605, 647, 1461, 1785, 1989
BfmI CTRYAG 2 cut(s) 28, 2299
BfuAI ACCTGC 1 cut(s) 2446
BfuI GTATCC 2 cut(s) 415, 1804
BglI GCCNNNNNGGC 1 cut(s) 24
BglII AGATCT 3 cut(s) 1124, 1853, 2393
BisI GCNGC 6 cut(s) 1254, 1373, 1915, 1954, 2329, 2373
BlsI GCNGC 6 cut(s) 1255, 1374, 1916, 1955, 2330, 2374
Bme1390I CCNGG 8 cut(s) 419, 567, 1452, 1519, 1717, 2260, 2513, 2537
Bme18I GGWCC 3 cut(s) 347, 563, 2430
BmeT110I CYCGRG 2 cut(s) 1590, 2376
BmgT120I GGNCC 8 cut(s) 16, 347, 563, 1146, 1593, 1594, 2430, 2509
BmrFI CCNGG 8 cut(s) 419, 567, 1452, 1519, 1717, 2260, 2513, 2537
BmrI ACTGGG 3 cut(s) 1700, 1970, 2354
BmsI GCATC 6 cut(s) 68, 811, 1279, 1387, 1623, 1757
BmuI ACTGGG 3 cut(s) 1700, 1970, 2354
BpiI GAAGAC 2 cut(s) 786, 2472
BplI GAGNNNNNCTC 2 cut(s) 917, 949
Bpu10I CCTNAGC 1 cut(s) 1882
BpuEI CTTGAG 3 cut(s) 1355, 1495, 1945
BpuMI CCSGG 2 cut(s) 1717, 2537
BsaAI YACGTR 1 cut(s) 2276
BsaBI GATNNNNATC 2 cut(s) 249, 732
BsaI GGTCTC 5 cut(s) 355, 1232, 1725, 2128, 2268
BsaWI WCCGGW 2 cut(s) 1429, 2322
BsaXI ACNNNNNCTCC 6 cut(s) 1858, 1888, 2248, 2278, 2317, 2347
Bsc4I CCNNNNNNNGG 6 cut(s) 356, 1591, 1602, 1937, 2288, 2365
Bse118I RCCGGY 1 cut(s) 1930
Bse1I ACTGG 5 cut(s) 487, 1679, 1706, 1976, 2360
Bse3DI GCAATG 1 cut(s) 1387
Bse8I GATNNNNATC 2 cut(s) 249, 732
BseAI TCCGGA 1 cut(s) 2322
BseBI CCWGG 6 cut(s) 419, 567, 1452, 1519, 2260, 2513
BseGI GGATG 9 cut(s) 83, 238, 481, 692, 992, 1288, 1748, 2319, 2337
BseJI GATNNNNATC 2 cut(s) 249, 732
BseLI CCNNNNNNNGG 6 cut(s) 356, 1591, 1602, 1937, 2288, 2365
BseMI GCAATG 1 cut(s) 1387
BseMII CTCAG 9 cut(s) 149, 626, 915, 1164, 1259, 1484, 1896, 2228, 2448
BseNI ACTGG 5 cut(s) 487, 1679, 1706, 1976, 2360
BseRI GAGGAG 5 cut(s) 521, 524, 901, 1537, 1578
BseSI GKGCMC 1 cut(s) 1597
BseXI GCAGC 4 cut(s) 1240, 1384, 1965, 2359
BseYI CCCAGC 2 cut(s) 1256, 1654
BshFI GGCC 5 cut(s) 18, 1148, 1595, 1930, 2511
BsiHKAI GWGCWC 2 cut(s) 295, 322
BsiHKCI CYCGRG 2 cut(s) 1590, 2376
BsiSI CCGG 5 cut(s) 1430, 1717, 1931, 2323, 2537
BslFI GGGAC 4 cut(s) 1500, 1536, 2082, 2319
BslI CCNNNNNNNGG 6 cut(s) 356, 1591, 1602, 1937, 2288, 2365
BsmAI GTCTC 7 cut(s) 355, 1050, 1089, 1232, 1725, 2128, 2268
BsmFI GGGAC 4 cut(s) 1500, 1536, 2082, 2319
BsnI GGCC 5 cut(s) 18, 1148, 1595, 1930, 2511
Bso31I GGTCTC 5 cut(s) 355, 1232, 1725, 2128, 2268
BsoBI CYCGRG 2 cut(s) 1590, 2376
Bsp120I GGGCCC 1 cut(s) 1593
Bsp1286I GDGCHC 5 cut(s) 295, 322, 1597, 1706, 2417
Bsp13I TCCGGA 1 cut(s) 2322
Bsp1407I TGTACA 2 cut(s) 168, 326
BspACI CCGC 9 cut(s) 52, 716, 1081, 1375, 1915, 2086, 2104, 2296, 2329
BspANI GGCC 5 cut(s) 18, 1148, 1595, 1930, 2511
BspCNI CTCAG 9 cut(s) 150, 625, 916, 1163, 1258, 1485, 1895, 2229, 2447
BspEI TCCGGA 1 cut(s) 2322
BspHI TCATGA 1 cut(s) 832
BspMI ACCTGC 1 cut(s) 2446
BspPI GGATC 3 cut(s) 245, 1483, 1496
BspTNI GGTCTC 5 cut(s) 355, 1232, 1725, 2128, 2268
BsrDI GCAATG 1 cut(s) 1387
BsrFI RCCGGY 1 cut(s) 1930
BsrGI TGTACA 2 cut(s) 168, 326
BsrI ACTGG 5 cut(s) 487, 1679, 1706, 1976, 2360
BssAI RCCGGY 1 cut(s) 1930
BssT1I CCWWGG 3 cut(s) 219, 1356, 2450
Bst2UI CCWGG 6 cut(s) 419, 567, 1452, 1519, 2260, 2513
Bst6I CTCTTC 2 cut(s) 878, 1679
BstAUI TGTACA 2 cut(s) 168, 326
BstBAI YACGTR 1 cut(s) 2276
BstC8I GCNNGC 3 cut(s) 104, 1388, 2084
BstEII GGTNACC 1 cut(s) 2291
BstF5I GGATG 9 cut(s) 83, 238, 481, 692, 992, 1288, 1748, 2319, 2337
BstHHI GCGC 2 cut(s) 2058, 2391
BstMAI GTCTC 7 cut(s) 355, 1050, 1089, 1232, 1725, 2128, 2268
BstMWI GCNNNNNNNGC 6 cut(s) 15, 24, 527, 809, 1111, 1650
BstNI CCWGG 6 cut(s) 419, 567, 1452, 1519, 2260, 2513
BstNSI RCATGY 2 cut(s) 106, 662
BstPI GGTNACC 1 cut(s) 2291
BstSCI CCNGG 8 cut(s) 417, 565, 1450, 1517, 1715, 2258, 2511, 2535
BstSFI CTRYAG 2 cut(s) 28, 2299
BstSLI GKGCMC 1 cut(s) 1597
BstV1I GCAGC 4 cut(s) 1240, 1384, 1965, 2359
BstV2I GAAGAC 2 cut(s) 786, 2472
BstX2I RGATCY 5 cut(s) 250, 1124, 1488, 1853, 2393
BstYI RGATCY 5 cut(s) 250, 1124, 1488, 1853, 2393
BsuI GTATCC 2 cut(s) 415, 1804
BsuRI GGCC 5 cut(s) 18, 1148, 1595, 1930, 2511
BtgZI GCGATG 1 cut(s) 377
BtsCI GGATG 9 cut(s) 83, 238, 481, 692, 992, 1288, 1748, 2319, 2337
BtsI GCAGTG 1 cut(s) 1284
BtsIMutI CAGTG 6 cut(s) 480, 508, 753, 1284, 1686, 2367
BveI ACCTGC 1 cut(s) 2446
Cac8I GCNNGC 3 cut(s) 104, 1388, 2084
CaiI CAGNNNCTG 1 cut(s) 824
CciI TCATGA 1 cut(s) 832
CfoI GCGC 2 cut(s) 2058, 2391
Cfr10I RCCGGY 1 cut(s) 1930
Cfr13I GGNCC 8 cut(s) 16, 347, 563, 1146, 1593, 1594, 2430, 2509
CsiI ACCWGGT 1 cut(s) 2258
Csp6I GTAC 6 cut(s) 169, 327, 1979, 2089, 2107, 2191
CviAII CATG 6 cut(s) 92, 103, 172, 659, 683, 833
CviQI GTAC 6 cut(s) 169, 327, 1979, 2089, 2107, 2191
Eam1104I CTCTTC 2 cut(s) 878, 1679
EarI CTCTTC 2 cut(s) 878, 1679
Eco130I CCWWGG 3 cut(s) 219, 1356, 2450
Eco24I GRGCYC 3 cut(s) 1597, 1706, 2417
Eco31I GGTCTC 5 cut(s) 355, 1232, 1725, 2128, 2268
Eco47I GGWCC 3 cut(s) 347, 563, 2430
Eco57I CTGAAG 3 cut(s) 516, 801, 1209
Eco88I CYCGRG 2 cut(s) 1590, 2376
Eco91I GGTNACC 1 cut(s) 2291
EcoO109I RGGNCCY 4 cut(s) 1146, 1594, 2430, 2509
EcoO65I GGTNACC 1 cut(s) 2291
EcoRII CCWGG 6 cut(s) 417, 565, 1450, 1517, 2258, 2511
EcoT14I CCWWGG 3 cut(s) 219, 1356, 2450
EcoT22I ATGCAT 1 cut(s) 108
EcoT38I GRGCYC 3 cut(s) 1597, 1706, 2417
ErhI CCWWGG 3 cut(s) 219, 1356, 2450
FaeI CATG 6 cut(s) 95, 106, 175, 662, 686, 836
FalI AAGNNNNNCTT 2 cut(s) 203, 235
FaqI GGGAC 4 cut(s) 1500, 1536, 2082, 2319
FatI CATG 6 cut(s) 91, 102, 171, 658, 682, 832
FauI CCCGC 2 cut(s) 709, 1074
FbaI TGATCA 1 cut(s) 1444
FblI GTMKAC 2 cut(s) 187, 1108
Fnu4HI GCNGC 6 cut(s) 1254, 1373, 1915, 1954, 2329, 2373
FokI GGATG 9 cut(s) 90, 245, 488, 699, 979, 1295, 1735, 2306, 2324
FriOI GRGCYC 3 cut(s) 1597, 1706, 2417
Fsp4HI GCNGC 6 cut(s) 1254, 1373, 1915, 1954, 2329, 2373
FspBI CTAG 7 cut(s) 98, 137, 605, 647, 1461, 1785, 1989
GlaI GCGC 2 cut(s) 2057, 2390
GluI GCNGC 6 cut(s) 1254, 1373, 1915, 1954, 2329, 2373
GsaI CCCAGC 2 cut(s) 1260, 1658
HaeIII GGCC 5 cut(s) 18, 1148, 1595, 1930, 2511
HapII CCGG 5 cut(s) 1430, 1717, 1931, 2323, 2537
HhaI GCGC 2 cut(s) 2058, 2391
Hin1II CATG 6 cut(s) 95, 106, 175, 662, 686, 836
Hin6I GCGC 2 cut(s) 2056, 2389
HinP1I GCGC 2 cut(s) 2056, 2389
HindIII AAGCTT 2 cut(s) 810, 1471
HpaII CCGG 5 cut(s) 1430, 1717, 1931, 2323, 2537
Hpy166II GTNNAC 2 cut(s) 188, 1109
Hpy8I GTNNAC 2 cut(s) 188, 1109
Hpy99I CGWCG 4 cut(s) 1953, 1986, 2289, 2488
HpyAV CCTTC 9 cut(s) 873, 1137, 1210, 1857, 2058, 2127, 2181, 2409, 2500
HpyCH4IV ACGT 3 cut(s) 1069, 1981, 2275
HpyCH4V TGCA 9 cut(s) 106, 240, 1073, 1208, 1277, 1418, 1748, 1871, 2099
HpyF10VI GCNNNNNNNGC 6 cut(s) 15, 24, 527, 809, 1111, 1650
HpySE526I ACGT 3 cut(s) 1069, 1981, 2275
Hsp92II CATG 6 cut(s) 95, 106, 175, 662, 686, 836
HspAI GCGC 2 cut(s) 2056, 2389
Kpn2I TCCGGA 1 cut(s) 2322
Ksp22I TGATCA 1 cut(s) 1444
Lsp1109I GCAGC 4 cut(s) 1240, 1384, 1965, 2359
LweI GCATC 6 cut(s) 68, 811, 1279, 1387, 1623, 1757
MabI ACCWGGT 1 cut(s) 2258
MaeI CTAG 7 cut(s) 98, 137, 605, 647, 1461, 1785, 1989
MaeII ACGT 3 cut(s) 1069, 1981, 2275
MaeIII GTNAC 9 cut(s) 407, 436, 596, 742, 929, 1175, 1181, 2165, 2291
MflI RGATCY 5 cut(s) 250, 1124, 1488, 1853, 2393
MhlI GDGCHC 5 cut(s) 295, 322, 1597, 1706, 2417
MluCI AATT 6 cut(s) 310, 342, 944, 1299, 1326, 1413
MmeI TCCRAC 3 cut(s) 761, 1670, 2466
Mph1103I ATGCAT 1 cut(s) 108
MroI TCCGGA 1 cut(s) 2322
MroXI GAANNNNTTC 3 cut(s) 2032, 2116, 2347
MseI TTAA 3 cut(s) 1203, 1632, 1710
MslI CAYNNNNRTG 1 cut(s) 685
MspA1I CMGCKG 3 cut(s) 74, 1375, 2086
MspI CCGG 5 cut(s) 1430, 1717, 1931, 2323, 2537
MspR9I CCNGG 8 cut(s) 419, 567, 1452, 1519, 1717, 2260, 2513, 2537
MvaI CCWGG 6 cut(s) 419, 567, 1452, 1519, 2260, 2513
MwoI GCNNNNNNNGC 6 cut(s) 15, 24, 527, 809, 1111, 1650
NciI CCSGG 2 cut(s) 1717, 2537
NlaIII CATG 6 cut(s) 95, 106, 175, 662, 686, 836
NmuCI GTSAC 7 cut(s) 436, 596, 742, 929, 1175, 2165, 2291
NsiI ATGCAT 1 cut(s) 108
NspI RCATGY 2 cut(s) 106, 662
PaeI GCATGC 1 cut(s) 106
PagI TCATGA 1 cut(s) 832
PaqCI CACCTGC 1 cut(s) 2446
PcsI WCGNNNNNNNCGW 2 cut(s) 2161, 2281
PdmI GAANNNNTTC 3 cut(s) 2032, 2116, 2347
PfeI GAWTC 7 cut(s) 214, 733, 911, 938, 950, 959, 971
PflMI CCANNNNNTGG 1 cut(s) 356
PkrI GCNGC 6 cut(s) 1255, 1374, 1916, 1955, 2330, 2374
Ppu21I YACGTR 1 cut(s) 2276
PpuMI RGGWCCY 1 cut(s) 2430
PsiI TTATAA 1 cut(s) 1050
Psp5II RGGWCCY 1 cut(s) 2430
Psp6I CCWGG 6 cut(s) 417, 565, 1450, 1517, 2258, 2511
PspEI GGTNACC 1 cut(s) 2291
PspFI CCCAGC 2 cut(s) 1256, 1654
PspGI CCWGG 6 cut(s) 417, 565, 1450, 1517, 2258, 2511
PspOMI GGGCCC 1 cut(s) 1593
PspPI GGNCC 8 cut(s) 16, 347, 563, 1146, 1593, 1594, 2430, 2509
PspPPI RGGWCCY 1 cut(s) 2430
PstNI CAGNNNCTG 1 cut(s) 824
PsuI RGATCY 5 cut(s) 250, 1124, 1488, 1853, 2393
PvuII CAGCTG 1 cut(s) 74
RsaI GTAC 6 cut(s) 170, 328, 1980, 2090, 2108, 2192
RsaNI GTAC 6 cut(s) 169, 327, 1979, 2089, 2107, 2191
RseI CAYNNNNRTG 1 cut(s) 685
SaqAI TTAA 3 cut(s) 1203, 1632, 1710
SatI GCNGC 6 cut(s) 1254, 1373, 1915, 1954, 2329, 2373
Sau96I GGNCC 8 cut(s) 16, 347, 563, 1146, 1593, 1594, 2430, 2509
ScrFI CCNGG 8 cut(s) 419, 567, 1452, 1519, 1717, 2260, 2513, 2537
SduI GDGCHC 5 cut(s) 295, 322, 1597, 1706, 2417
SexAI ACCWGGT 1 cut(s) 2258
SfaNI GCATC 6 cut(s) 68, 811, 1279, 1387, 1623, 1757
SfcI CTRYAG 2 cut(s) 28, 2299
SinI GGWCC 3 cut(s) 347, 563, 2430
SmiMI CAYNNNNRTG 1 cut(s) 685
SmlI CTYRAG 3 cut(s) 1334, 1474, 1960
SmoI CTYRAG 3 cut(s) 1334, 1474, 1960
SphI GCATGC 1 cut(s) 106
Sse9I AATT 6 cut(s) 310, 342, 944, 1299, 1326, 1413
SsiI CCGC 9 cut(s) 52, 716, 1081, 1375, 1915, 2086, 2104, 2296, 2329
SspMI CTAG 7 cut(s) 98, 137, 605, 647, 1461, 1785, 1989
StyD4I CCNGG 8 cut(s) 417, 565, 1450, 1517, 1715, 2258, 2511, 2535
StyI CCWWGG 3 cut(s) 219, 1356, 2450
TaiI ACGT 3 cut(s) 1072, 1984, 2278
TaqI TCGA 5 cut(s) 133, 917, 1861, 1969, 2155
TasI AATT 6 cut(s) 310, 342, 944, 1299, 1326, 1413
TatI WGTACW 2 cut(s) 168, 326
TauI GCSGC 2 cut(s) 1917, 2331
TfiI GAWTC 7 cut(s) 214, 733, 911, 938, 950, 959, 971
Tru1I TTAA 3 cut(s) 1203, 1632, 1710
Tru9I TTAA 3 cut(s) 1203, 1632, 1710
TscAI CASTG 6 cut(s) 487, 508, 753, 1284, 1686, 2367
TseFI GTSAC 7 cut(s) 436, 596, 742, 929, 1175, 2165, 2291
TseI GCWGC 4 cut(s) 1253, 1372, 1953, 2372
Tsp45I GTSAC 7 cut(s) 436, 596, 742, 929, 1175, 2165, 2291
TspDTI ATGAA 6 cut(s) 80, 607, 849, 903, 942, 2109
TspGWI ACGGA 3 cut(s) 305, 576, 1380
TspRI CASTG 6 cut(s) 487, 508, 753, 1284, 1686, 2367
Van91I CCANNNNNTGG 1 cut(s) 356
VpaK11BI GGWCC 3 cut(s) 347, 563, 2430
XbaI TCTAGA 1 cut(s) 646
XceI RCATGY 2 cut(s) 106, 662
XcmI CCANNNNNNNNNTGG 1 cut(s) 1686
XmiI GTMKAC 2 cut(s) 187, 1108
XmnI GAANNNNTTC 3 cut(s) 2032, 2116, 2347
XspI CTAG 7 cut(s) 98, 137, 605, 647, 1461, 1785, 1989
Zsp2I ATGCAT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.