Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0008842

Physical Location & Seq

Genomic Coordinates Forward (+)

42909528 .. 42911531

Gene Structure 2004 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0281600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGAGGAGGTCGTTGGTGGTTTTGTCCGGAAGCTGGCAATTTCAGATCCGAGTGTGGTGGAGGTGGTTTTGCCTGAGAAGCCGGCTGGCAATCGATCACAACGTTTCTTCATGGTGGGAGAGTTGTTGACTTGTAAGCCCTACCGGACAGAGGCCCTCATTAGTACTCTTAAGGGTCTCTGGGTTCCGAAGAATGGGCCGGTGGATAGATCGAGAATTACTGTCTGCAGCCTAGAAGGAAGCAACAGGCTGCTGTTTTCCTTCAAGTATGAGGCGGACGTGAAGTGGGTGGTACGCGGCTGCCCATGGACTTTTGAGAAGGCGCTGTTTGCCGTAGCAATAACGGACGGGACGGTGGATCCAATGAAGGTGTCGTTGGCCACCCAATACTTCTGGATTAGGATTAGGGGACTTCCTACGAAGTATATGGACGATAAAACGGGGAAGAGTATTGGCAATGCGGTGGGCGAATATGTTCGAACCTTCAAGGACCGGCAGGGGAGTTGTTTGGGAAGTTACCTCCGTATCCGAGTGGGGGTTAAGGTGGATGAGCCGCTGGTTAAGGAAGTTGCTTTCCGGCCGTCTGGTTGGCCTGAGAGTAGGATTTACCGAGTGGAGTATGAACACTTACCCCATTTTTGCCTCTTCTGTGGCTTGTTATCCCACACAGGTAACAGTTGTCCTCGCCGGGAGGCCGGGGAGGTGACGGAGCACAAGTATGATGTTCTCCTCAATGCAGAGCGCATGGAGGAGTGGATCGTCTCACAACAGAGGGCGAGGTCAAATGAGAGCCCGGAGAAGACCTGGACAGGCAGAAGGTTTGGCTTGTTCTCTGGGAGGCGTAGTGGGTGGACCATGGTGGCGCCGGATTTTCCCACGTGTGGGGTGGTCCGGTCCAGGGAGGAAATGGAAGGTGGAGATGTGGTACTGGAGTCCAGCACAGATCGTGCACAAGAGGAGGATGGCATGGATGTTGCGCTGATGGAGGAGGAGGATGAGTCAGGGGCTGGGCCGAGCACGAAACGGCGGTGCTTGACCTGGACCGGTGGCGGGCACGGTGGTCCAACACCGATGGCTGGAGTGGATGGGCAGCTACGGGAGGTGCCTGTTCAGGAATGTCCAGATTTTCCGTGGGAATTGATTAGGAAATCTGGATCCGCTATCTCAGGCGGGAGTTTTGGCCAATTAGGATCTCCTAATTCTTTGGAGAAAGTAATGGTACAGACGACCACCACTGATGATGCGGCGCAAGTGGGTAAGAGTAATTTAAAAAAGAATGTAGTTGATGTGGGGCCTAGGGTTCGCAAGAATGGTGCTGCTACTATTTCTTCTGGAAGTTTCTTGAAGAAGAAGGGGGAACAATTATTGCATGGGAAGTCTGTGAGTAAGGTTGGAGGGCGGGGGCAGGCCGAGTCGTCCTCCAAAGAATGTAGGCCTGAGAAGAAGGTAATGGGTGGGAGTGGTAAGAAAGAGAAGAAAGGGTTTGTGGTAAGACATATTGGTGATGGGTGGCAAGTTTCCGAAGTTGAGTCATGGACGTACTCTCGAACGTTCATCCGTGATGGGTCCGGAGCTGGCCCATCACGAGCCATGAATATTCTCTGCTGGAACTGTCAGGGGCTCGGGAACCCTTGGACAGTTCAGGGGCTTAAAGGGTTGTTAACCCTAAACCATCCCACAATTGTGTTTTTGAGTGAGACGCGGTGTACGGCTGATGAGATAACAAGGGTTCGTAGGCAAGTAGGGTGGAAGAATAGTTTTGCTGTTTCTTGTAATTTCAAAAAAAAGAAAGGGGATAAGGGGGTCAGTAGGTCCGGTGGAGTTGCTTTATTATGGAAGGAGGATGTAATGGTGTCTCTGAGTACTTACTCAGGAAATCACATTGACGTTATAGTTGGAGATGATAATGGAGTAGGGCGATGGAGGTTTACAGGGGTTGTATGGTTTCCCAAAGGTGGAGGATCGGCATCGTACATGGGCTCTATTGAAAGAGTTAGCTCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

667

Amino Acids

73.42

Weight (kDa)

9.15

Isoelectric Point (pI)

38.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008842)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29630 FvH4_2g29630 FvH4_2g29630 FvH4_2g29630 FvH4_2g29630
malus_domestica	MD08G1145000.v1.1 MD15G1120600.v1.1
prunus_persica	Prupe.1G473300_v2.0.a1
pyrus_communis	pycom08g12230 pycom15g10880
rosa_chinensis	RchiOBHm_Chr6g0298601
rosa_laevigata	RLG00000011500
rosa_multiflora	Rmu_sc0004500.1_g000014
rosa_roxburghii	Rroxscaffold_7G00169500
rosa_rugosa	Rorug06G0281300.1 Rorug06G0281400 Rorug06G0281500 Rorug06G0281600
rosa_samantha	Rh6AG393000 Rh6BG400700 Rh6CG406600 Rh6DG393300
rosa_wichuraiana	Rw6G034350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	862, 1102
AccII	CGCG	2 cut(s)	297, 1702
AccIII	TCCGGA	2 cut(s)	27, 1568
AclI	AACGTT	2 cut(s)	103, 1550
AclWI	GGATC	8 cut(s)	41, 353, 366, 764, 1149, 1162, 1198, 1969
AcoI	YGGCCR	3 cut(s)	378, 578, 1180
AcvI	CACGTG	1 cut(s)	879
AcyI	GRCGYC	1 cut(s)	863
AfaI	GTAC	8 cut(s)	166, 294, 927, 1221, 1541, 1708, 1864, 1973
AflII	CTTAAG	1 cut(s)	170
AflIII	ACRYGT	1 cut(s)	878
AgeI	ACCGGT	1 cut(s)	1043
AgsI	TTSAA	5 cut(s)	265, 487, 1345, 1780, 1988
AjiI	CACGTC	1 cut(s)	280
AjnI	CCWGG	3 cut(s)	803, 896, 1037
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AleI	CACNNNNGTG	1 cut(s)	1682
AluBI	AGCT	4 cut(s)	34, 1093, 1574, 1998
AluI	AGCT	4 cut(s)	34, 1093, 1574, 1998
Alw21I	GWGCWC	3 cut(s)	714, 952, 1019
Alw26I	GTCTC	4 cut(s)	182, 766, 1691, 1860
Alw44I	GTGCAC	1 cut(s)	948
AlwI	GGATC	8 cut(s)	41, 353, 366, 764, 1149, 1162, 1198, 1969
AlwNI	CAGNNNCTG	1 cut(s)	1007
Ama87I	CYCGRG	1 cut(s)	1622
Aor13HI	TCCGGA	2 cut(s)	27, 1568
ApaLI	GTGCAC	1 cut(s)	948
ApeKI	GCWGC	5 cut(s)	228, 250, 300, 1090, 1316
AsiGI	ACCGGT	1 cut(s)	1043
Asp700I	GAANNNNTTC	1 cut(s)	474
AspA2I	CCTAGG	1 cut(s)	1295
AspLEI	GCGC	5 cut(s)	325, 744, 865, 979, 1249
AsuC2I	CCSGG	3 cut(s)	689, 697, 794
AsuHPI	GGTGA	2 cut(s)	715, 1514
AsuII	TTCGAA	1 cut(s)	478
AvaI	CYCGRG	1 cut(s)	1622
AvaII	GGWCC	8 cut(s)	490, 852, 889, 894, 1041, 1061, 1566, 1812
AvrII	CCTAGG	1 cut(s)	1295
BaeGI	GKGCMC	2 cut(s)	952, 1056
BaeI	ACNNNNGTAYC	4 cut(s)	508, 541, 917, 950
BalI	TGGCCA	2 cut(s)	380, 1182
BamHI	GGATCC	2 cut(s)	358, 1154
BanI	GGYRCC	2 cut(s)	862, 1102
BanII	GRGCYC	3 cut(s)	794, 1623, 1982
BauI	CACGAG	1 cut(s)	1584
BbrPI	CACGTG	1 cut(s)	879
BbsI	GAAGAC	1 cut(s)	806
Bbv12I	GWGCWC	3 cut(s)	714, 952, 1019
BbvI	GCAGC	5 cut(s)	237, 240, 287, 1102, 1303
BccI	CCATC	9 cut(s)	956, 976, 1066, 1079, 1499, 1556, 1588, 1680, 1914
BceAI	ACGGC	4 cut(s)	317, 565, 1040, 1725
BciT130I	CCWGG	3 cut(s)	805, 898, 1039
BciVI	GTATCC	1 cut(s)	536
BcnI	CCSGG	3 cut(s)	689, 697, 794
BcoDI	GTCTC	4 cut(s)	182, 766, 1691, 1860
BfaI	CTAG	2 cut(s)	233, 1296
BfmI	CTRYAG	1 cut(s)	226
BfoI	RGCGCY	2 cut(s)	326, 866
BfrI	CTTAAG	1 cut(s)	170
BfuI	GTATCC	1 cut(s)	536
BisI	GCNGC	8 cut(s)	229, 251, 298, 301, 554, 1091, 1245, 1317
BlnI	CCTAGG	1 cut(s)	1295
BlsI	GCNGC	8 cut(s)	230, 252, 299, 302, 555, 1092, 1246, 1318
BmcAI	AGTACT	2 cut(s)	166, 1864
Bme1390I	CCNGG	6 cut(s)	689, 697, 794, 805, 898, 1039
Bme18I	GGWCC	8 cut(s)	490, 852, 889, 894, 1041, 1061, 1566, 1812
BmeT110I	CYCGRG	1 cut(s)	1622
BmgBI	CACGTC	1 cut(s)	280
BmiI	GGNNCC	8 cut(s)	186, 360, 864, 1104, 1156, 1293, 1567, 1628
BmrFI	CCNGG	6 cut(s)	689, 697, 794, 805, 898, 1039
BmsI	GCATC	2 cut(s)	1231, 1976
BpiI	GAAGAC	1 cut(s)	806
BplI	GAGNNNNNCTC	2 cut(s)	1403, 1435
BpmI	CTGGAG	2 cut(s)	950, 1098
Bpu14I	TTCGAA	1 cut(s)	478
BpuMI	CCSGG	3 cut(s)	689, 697, 794
Bsa29I	ATCGAT	1 cut(s)	94
BsaAI	YACGTR	1 cut(s)	879
BsaBI	GATNNNNATC	1 cut(s)	1966
BsaHI	GRCGYC	1 cut(s)	863
BsaI	GGTCTC	1 cut(s)	182
BsaJI	CCNNGG	7 cut(s)	305, 696, 855, 897, 1130, 1295, 1631
BsaWI	WCCGGW	6 cut(s)	27, 144, 891, 1043, 1568, 1814
BsaXI	ACNNNNNCTCC	8 cut(s)	701, 731, 829, 859, 909, 939, 983, 1013
Bse118I	RCCGGY	4 cut(s)	82, 199, 492, 1043
Bse1I	ACTGG	1 cut(s)	933
Bse3DI	GCAATG	1 cut(s)	463
Bse8I	GATNNNNATC	1 cut(s)	1966
BseAI	TCCGGA	2 cut(s)	27, 1568
BseBI	CCWGG	3 cut(s)	805, 898, 1039
BseCI	ATCGAT	1 cut(s)	94
BseDI	CCNNGG	7 cut(s)	305, 696, 855, 897, 1130, 1295, 1631
BseGI	GGATG	8 cut(s)	553, 967, 976, 1000, 1090, 1554, 1672, 1849
BseJI	GATNNNNATC	1 cut(s)	1966
BseMI	GCAATG	1 cut(s)	463
BseMII	CTCAG	6 cut(s)	66, 585, 1179, 1428, 1850, 1884
BseNI	ACTGG	1 cut(s)	933
BseRI	GAGGAG	6 cut(s)	20, 719, 764, 971, 1001, 1004
BseSI	GKGCMC	2 cut(s)	952, 1056
BseX3I	CGGCCG	1 cut(s)	578
BseXI	GCAGC	5 cut(s)	237, 240, 287, 1102, 1303
BseYI	CCCAGC	1 cut(s)	1007
Bsh1236I	CGCG	2 cut(s)	297, 1702
Bsh1285I	CGRYCG	1 cut(s)	581
BshNI	GGYRCC	2 cut(s)	862, 1102
BshTI	ACCGGT	1 cut(s)	1043
BshVI	ATCGAT	1 cut(s)	94
BsiEI	CGRYCG	1 cut(s)	581
BsiHKAI	GWGCWC	3 cut(s)	714, 952, 1019
BsiHKCI	CYCGRG	1 cut(s)	1622
BslFI	GGGAC	2 cut(s)	364, 423
BsmAI	GTCTC	4 cut(s)	182, 766, 1691, 1860
BsmBI	CGTCTC	2 cut(s)	766, 1691
BsmFI	GGGAC	2 cut(s)	364, 423
Bso31I	GGTCTC	1 cut(s)	182
BsoBI	CYCGRG	1 cut(s)	1622
Bsp119I	TTCGAA	1 cut(s)	478
Bsp1286I	GDGCHC	7 cut(s)	714, 794, 952, 1019, 1056, 1623, 1982
Bsp13I	TCCGGA	2 cut(s)	27, 1568
Bsp143I	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
Bsp19I	CCATGG	2 cut(s)	305, 855
BspCNI	CTCAG	6 cut(s)	67, 586, 1178, 1429, 1851, 1883
BspDI	ATCGAT	1 cut(s)	94
BspEI	TCCGGA	2 cut(s)	27, 1568
BspFNI	CGCG	2 cut(s)	297, 1702
BspLI	GGNNCC	8 cut(s)	186, 360, 864, 1104, 1156, 1293, 1567, 1628
BspMAI	CTGCAG	1 cut(s)	230
BspPI	GGATC	8 cut(s)	41, 353, 366, 764, 1149, 1162, 1198, 1969
BspT104I	TTCGAA	1 cut(s)	478
BspT107I	GGYRCC	2 cut(s)	862, 1102
BspTI	CTTAAG	1 cut(s)	170
BspTNI	GGTCTC	1 cut(s)	182
BsrDI	GCAATG	1 cut(s)	463
BsrFI	RCCGGY	4 cut(s)	82, 199, 492, 1043
BsrI	ACTGG	1 cut(s)	933
BssAI	RCCGGY	4 cut(s)	82, 199, 492, 1043
BssECI	CCNNGG	7 cut(s)	305, 696, 855, 897, 1130, 1295, 1631
BssMI	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
BssNI	GRCGYC	1 cut(s)	863
BssSI	CACGAG	1 cut(s)	1584
BssT1I	CCWWGG	4 cut(s)	305, 855, 1295, 1631
Bst2BI	CACGAG	1 cut(s)	1584
Bst2UI	CCWGG	3 cut(s)	805, 898, 1039
Bst4CI	ACNGT	6 cut(s)	223, 355, 677, 1058, 1613, 1639
Bst6I	CTCTTC	2 cut(s)	440, 650
BstACI	GRCGYC	1 cut(s)	863
BstAFI	CTTAAG	1 cut(s)	170
BstBAI	YACGTR	1 cut(s)	879
BstBI	TTCGAA	1 cut(s)	478
BstC8I	GCNNGC	6 cut(s)	36, 84, 88, 1052, 1407, 1576
BstDEI	CTNAG	6 cut(s)	75, 594, 1165, 1437, 1859, 1870
BstDSI	CCRYGG	3 cut(s)	305, 855, 1130
BstF5I	GGATG	8 cut(s)	553, 967, 976, 1000, 1090, 1554, 1672, 1849
BstFNI	CGCG	2 cut(s)	297, 1702
BstH2I	RGCGCY	2 cut(s)	326, 866
BstHHI	GCGC	5 cut(s)	325, 744, 865, 979, 1249
BstKTI	GATC	9 cut(s)	49, 98, 212, 361, 759, 946, 1157, 1193, 1964
BstMAI	GTCTC	4 cut(s)	182, 766, 1691, 1860
BstMBI	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
BstMCI	CGRYCG	1 cut(s)	581
BstMWI	GCNNNNNNNGC	2 cut(s)	79, 329
BstNI	CCWGG	3 cut(s)	805, 898, 1039
BstSCI	CCNGG	6 cut(s)	687, 695, 792, 803, 896, 1037
BstSFI	CTRYAG	1 cut(s)	226
BstSLI	GKGCMC	2 cut(s)	952, 1056
BstUI	CGCG	2 cut(s)	297, 1702
BstV1I	GCAGC	5 cut(s)	237, 240, 287, 1102, 1303
BstV2I	GAAGAC	1 cut(s)	806
BstX2I	RGATCY	4 cut(s)	46, 358, 1154, 1190
BstYI	RGATCY	4 cut(s)	46, 358, 1154, 1190
BstZI	CGGCCG	1 cut(s)	578
Bsu15I	ATCGAT	1 cut(s)	94
BsuI	GTATCC	1 cut(s)	536
BsuTUI	ATCGAT	1 cut(s)	94
BtgI	CCRYGG	3 cut(s)	305, 855, 1130
BtgZI	GCGATG	1 cut(s)	1933
BtrI	CACGTC	1 cut(s)	280
BtsCI	GGATG	8 cut(s)	553, 967, 976, 1000, 1090, 1554, 1672, 1849
BtsIMutI	CAGTG	1 cut(s)	1233
Cac8I	GCNNGC	6 cut(s)	36, 84, 88, 1052, 1407, 1576
CaiI	CAGNNNCTG	1 cut(s)	1007
CfoI	GCGC	5 cut(s)	325, 744, 865, 979, 1249
Cfr10I	RCCGGY	4 cut(s)	82, 199, 492, 1043
ClaI	ATCGAT	1 cut(s)	94
CseI	GACGC	1 cut(s)	1708
Csp6I	GTAC	8 cut(s)	165, 293, 926, 1220, 1540, 1707, 1863, 1972
CspAI	ACCGGT	1 cut(s)	1043
CspCI	CAANNNNNGTGG	2 cut(s)	1727, 1762
CviAII	CATG	9 cut(s)	112, 306, 745, 856, 967, 1370, 1533, 1591, 1975
CviQI	GTAC	8 cut(s)	165, 293, 926, 1220, 1540, 1707, 1863, 1972
DdeI	CTNAG	6 cut(s)	75, 594, 1165, 1437, 1859, 1870
DinI	GGCGCC	1 cut(s)	864
DpnI	GATC	9 cut(s)	48, 97, 211, 360, 758, 945, 1156, 1192, 1963
DpnII	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
DraI	TTTAAA	1 cut(s)	1269
EaeI	YGGCCR	3 cut(s)	378, 578, 1180
EagI	CGGCCG	1 cut(s)	578
Eam1104I	CTCTTC	2 cut(s)	440, 650
EarI	CTCTTC	2 cut(s)	440, 650
EciI	GGCGGA	1 cut(s)	290
EclXI	CGGCCG	1 cut(s)	578
Eco130I	CCWWGG	4 cut(s)	305, 855, 1295, 1631
Eco147I	AGGCCT	1 cut(s)	1435
Eco24I	GRGCYC	3 cut(s)	794, 1623, 1982
Eco31I	GGTCTC	1 cut(s)	182
Eco47I	GGWCC	8 cut(s)	490, 852, 889, 894, 1041, 1061, 1566, 1812
Eco52I	CGGCCG	1 cut(s)	578
Eco72I	CACGTG	1 cut(s)	879
Eco88I	CYCGRG	1 cut(s)	1622
EcoO109I	RGGNCCY	2 cut(s)	154, 1292
EcoRII	CCWGG	3 cut(s)	803, 896, 1037
EcoT14I	CCWWGG	4 cut(s)	305, 855, 1295, 1631
EcoT38I	GRGCYC	3 cut(s)	794, 1623, 1982
EgeI	GGCGCC	1 cut(s)	864
EheI	GGCGCC	1 cut(s)	864
ErhI	CCWWGG	4 cut(s)	305, 855, 1295, 1631
Esp3I	CGTCTC	2 cut(s)	766, 1691
FaeI	CATG	9 cut(s)	115, 309, 748, 859, 970, 1373, 1536, 1594, 1978
FaqI	GGGAC	2 cut(s)	364, 423
FatI	CATG	9 cut(s)	111, 305, 744, 855, 966, 1369, 1532, 1590, 1974
FauI	CCCGC	3 cut(s)	1043, 1163, 1392
Fnu4HI	GCNGC	8 cut(s)	229, 251, 298, 301, 554, 1091, 1245, 1317
FokI	GGATG	8 cut(s)	560, 974, 983, 1007, 1097, 1541, 1659, 1856
FriOI	GRGCYC	3 cut(s)	794, 1623, 1982
Fsp4HI	GCNGC	8 cut(s)	229, 251, 298, 301, 554, 1091, 1245, 1317
FspBI	CTAG	2 cut(s)	233, 1296
GlaI	GCGC	5 cut(s)	324, 743, 864, 978, 1248
GluI	GCNGC	8 cut(s)	229, 251, 298, 301, 554, 1091, 1245, 1317
GsaI	CCCAGC	1 cut(s)	1011
GsuI	CTGGAG	2 cut(s)	950, 1098
HaeII	RGCGCY	2 cut(s)	326, 866
HgaI	GACGC	1 cut(s)	1708
HhaI	GCGC	5 cut(s)	325, 744, 865, 979, 1249
Hin1I	GRCGYC	1 cut(s)	863
Hin1II	CATG	9 cut(s)	115, 309, 748, 859, 970, 1373, 1536, 1594, 1978
Hin6I	GCGC	5 cut(s)	323, 742, 863, 977, 1247
HinP1I	GCGC	5 cut(s)	323, 742, 863, 977, 1247
HincII	GTYRAC	2 cut(s)	129, 1662
HindII	GTYRAC	2 cut(s)	129, 1662
HinfI	GANTC	4 cut(s)	932, 998, 1412, 1529
HpaI	GTTAAC	1 cut(s)	1662
HphI	GGTGA	2 cut(s)	715, 1514
Hpy166II	GTNNAC	6 cut(s)	129, 852, 950, 1662, 1707, 1929
Hpy188I	TCNGA	6 cut(s)	46, 51, 189, 530, 1522, 1860
Hpy8I	GTNNAC	6 cut(s)	129, 852, 950, 1662, 1707, 1929
HpyCH4III	ACNGT	6 cut(s)	223, 355, 677, 1058, 1613, 1639
HpyCH4IV	ACGT	6 cut(s)	103, 279, 878, 1538, 1550, 1887
HpyCH4V	TGCA	4 cut(s)	228, 737, 950, 1369
HpyF10VI	GCNNNNNNNGC	2 cut(s)	79, 329
HpyF3I	CTNAG	6 cut(s)	75, 594, 1165, 1437, 1859, 1870
HpySE526I	ACGT	6 cut(s)	103, 279, 878, 1538, 1550, 1887
Hsp92I	GRCGYC	1 cut(s)	863
Hsp92II	CATG	9 cut(s)	115, 309, 748, 859, 970, 1373, 1536, 1594, 1978
HspAI	GCGC	5 cut(s)	323, 742, 863, 977, 1247
KasI	GGCGCC	1 cut(s)	862
Kpn2I	TCCGGA	2 cut(s)	27, 1568
KroI	GCCGGC	1 cut(s)	82
KroNI	GCCGGC	1 cut(s)	84
KspAI	GTTAAC	1 cut(s)	1662
Kzo9I	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
LmnI	GCTCC	2 cut(s)	709, 1571
Lsp1109I	GCAGC	5 cut(s)	237, 240, 287, 1102, 1303
LweI	GCATC	2 cut(s)	1231, 1976
MaeI	CTAG	2 cut(s)	233, 1296
MaeII	ACGT	6 cut(s)	103, 279, 878, 1538, 1550, 1887
MaeIII	GTNAC	3 cut(s)	515, 671, 703
MalI	GATC	9 cut(s)	48, 97, 211, 360, 758, 945, 1156, 1192, 1963
MboI	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
MfeI	CAATTG	1 cut(s)	1680
MflI	RGATCY	4 cut(s)	46, 358, 1154, 1190
MhlI	GDGCHC	7 cut(s)	714, 794, 952, 1019, 1056, 1623, 1982
MlsI	TGGCCA	2 cut(s)	380, 1182
MluCI	AATT	9 cut(s)	39, 216, 1136, 1184, 1198, 1264, 1361, 1680, 1774
MluNI	TGGCCA	2 cut(s)	380, 1182
Mly113I	GGCGCC	1 cut(s)	863
MlyI	GAGTC	4 cut(s)	941, 1007, 1421, 1538
MmeI	TCCRAC	3 cut(s)	1088, 1372, 1876
Mox20I	TGGCCA	2 cut(s)	380, 1182
MroI	TCCGGA	2 cut(s)	27, 1568
MroNI	GCCGGC	1 cut(s)	82
MroXI	GAANNNNTTC	1 cut(s)	474
MscI	TGGCCA	2 cut(s)	380, 1182
MseI	TTAA	6 cut(s)	171, 540, 561, 1268, 1650, 1661
MslI	CAYNNNNRTG	3 cut(s)	717, 1500, 1682
Msp20I	TGGCCA	2 cut(s)	380, 1182
MspA1I	CMGCKG	1 cut(s)	556
MspCI	CTTAAG	1 cut(s)	170
MspR9I	CCNGG	6 cut(s)	689, 697, 794, 805, 898, 1039
MunI	CAATTG	1 cut(s)	1680
MvaI	CCWGG	3 cut(s)	805, 898, 1039
MvnI	CGCG	2 cut(s)	297, 1702
MwoI	GCNNNNNNNGC	2 cut(s)	79, 329
NaeI	GCCGGC	1 cut(s)	84
NarI	GGCGCC	1 cut(s)	863
NciI	CCSGG	3 cut(s)	689, 697, 794
NcoI	CCATGG	2 cut(s)	305, 855
NdeII	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
NgoMIV	GCCGGC	1 cut(s)	82
NlaIII	CATG	9 cut(s)	115, 309, 748, 859, 970, 1373, 1536, 1594, 1978
NlaIV	GGNNCC	8 cut(s)	186, 360, 864, 1104, 1156, 1293, 1567, 1628
NmeAIII	GCCGAG	2 cut(s)	1038, 1435
NmuCI	GTSAC	1 cut(s)	703
NspV	TTCGAA	1 cut(s)	478
OliI	CACNNNNGTG	1 cut(s)	1682
PceI	AGGCCT	1 cut(s)	1435
PcsI	WCGNNNNNNNCGW	1 cut(s)	100
PdiI	GCCGGC	1 cut(s)	84
PdmI	GAANNNNTTC	1 cut(s)	474
PinAI	ACCGGT	1 cut(s)	1043
PkrI	GCNGC	8 cut(s)	230, 252, 299, 302, 555, 1092, 1246, 1318
PleI	GAGTC	4 cut(s)	940, 1006, 1420, 1537
PluTI	GGCGCC	1 cut(s)	866
PmaCI	CACGTG	1 cut(s)	879
PmlI	CACGTG	1 cut(s)	879
PpsI	GAGTC	4 cut(s)	940, 1006, 1420, 1537
Ppu21I	YACGTR	1 cut(s)	879
Psp1406I	AACGTT	2 cut(s)	103, 1550
Psp6I	CCWGG	3 cut(s)	803, 896, 1037
PspCI	CACGTG	1 cut(s)	879
PspFI	CCCAGC	1 cut(s)	1007
PspGI	CCWGG	3 cut(s)	803, 896, 1037
PspN4I	GGNNCC	8 cut(s)	186, 360, 864, 1104, 1156, 1293, 1567, 1628
PstI	CTGCAG	1 cut(s)	230
PstNI	CAGNNNCTG	1 cut(s)	1007
PsuI	RGATCY	4 cut(s)	46, 358, 1154, 1190
RsaI	GTAC	8 cut(s)	166, 294, 927, 1221, 1541, 1708, 1864, 1973
RsaNI	GTAC	8 cut(s)	165, 293, 926, 1220, 1540, 1707, 1863, 1972
RseI	CAYNNNNRTG	3 cut(s)	717, 1500, 1682
SaqAI	TTAA	6 cut(s)	171, 540, 561, 1268, 1650, 1661
SatI	GCNGC	8 cut(s)	229, 251, 298, 301, 554, 1091, 1245, 1317
Sau3AI	GATC	9 cut(s)	46, 95, 209, 358, 756, 943, 1154, 1190, 1961
ScaI	AGTACT	2 cut(s)	166, 1864
SchI	GAGTC	4 cut(s)	941, 1007, 1421, 1538
ScrFI	CCNGG	6 cut(s)	689, 697, 794, 805, 898, 1039
SduI	GDGCHC	7 cut(s)	714, 794, 952, 1019, 1056, 1623, 1982
SfaNI	GCATC	2 cut(s)	1231, 1976
SfcI	CTRYAG	1 cut(s)	226
SfoI	GGCGCC	1 cut(s)	864
SfuI	TTCGAA	1 cut(s)	478
SinI	GGWCC	8 cut(s)	490, 852, 889, 894, 1041, 1061, 1566, 1812
SmiMI	CAYNNNNRTG	3 cut(s)	717, 1500, 1682
SmlI	CTYRAG	1 cut(s)	170
SmoI	CTYRAG	1 cut(s)	170
Sse9I	AATT	9 cut(s)	39, 216, 1136, 1184, 1198, 1264, 1361, 1680, 1774
SseBI	AGGCCT	1 cut(s)	1435
SspDI	GGCGCC	1 cut(s)	862
SspI	AATATT	1 cut(s)	1597
SspMI	CTAG	2 cut(s)	233, 1296
StuI	AGGCCT	1 cut(s)	1435
StyD4I	CCNGG	6 cut(s)	687, 695, 792, 803, 896, 1037
StyI	CCWWGG	4 cut(s)	305, 855, 1295, 1631
TaaI	ACNGT	6 cut(s)	223, 355, 677, 1058, 1613, 1639
TaiI	ACGT	6 cut(s)	106, 282, 881, 1541, 1553, 1890
TaqI	TCGA	4 cut(s)	94, 212, 478, 1546
TasI	AATT	9 cut(s)	39, 216, 1136, 1184, 1198, 1264, 1361, 1680, 1774
TatI	WGTACW	2 cut(s)	164, 1862
TauI	GCSGC	3 cut(s)	300, 556, 1247
Tru1I	TTAA	6 cut(s)	171, 540, 561, 1268, 1650, 1661
Tru9I	TTAA	6 cut(s)	171, 540, 561, 1268, 1650, 1661
TscAI	CASTG	1 cut(s)	1240
TseFI	GTSAC	1 cut(s)	703
TseI	GCWGC	5 cut(s)	228, 250, 300, 1090, 1316
Tsp45I	GTSAC	1 cut(s)	703
TspDTI	ATGAA	5 cut(s)	100, 380, 636, 1543, 1607
TspGWI	ACGGA	5 cut(s)	359, 512, 722, 1119, 1547
TspRI	CASTG	1 cut(s)	1240
Vha464I	CTTAAG	1 cut(s)	170
VneI	GTGCAC	1 cut(s)	948
VpaK11BI	GGWCC	8 cut(s)	490, 852, 889, 894, 1041, 1061, 1566, 1812
XcmI	CCANNNNNNNNNTGG	3 cut(s)	883, 904, 1128
XmaJI	CCTAGG	1 cut(s)	1295
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	2 cut(s)	233, 1296
ZrmI	AGTACT	2 cut(s)	166, 1864

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.