Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0008842

Physical Location & Seq

Genomic Coordinates Forward (+)

42892801 .. 42897830

Gene Structure 5030 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0281400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGTAAAGAGAAGCAAAAAGAGCAAAAGCAAGAGAGTGCCTCTGAAGAAGAAGTACAAGGTGATAAGGAAGGTGAAGGAGCACCACAAGAAGAAGGCCAAGGACGCCAAGAAGCTCGGCTTCCAGCGCAAGAAGGTCGAGAAGGACCCAGGTATCCCTAACGACTGGCCTTTCAAGGAGCAGGAGCTCAAGGCCCTCGAAGCTCGCCGCGCTCGTGTCATCGATGAAATCGAGCAGAAGAAAGCTGCCCGCAAAGAAAGGGCTCAGAAGAGGAAGCTGGGAGAGTTAGAGGACGACGATGACGAGGACTCCAAGTTGGATGAAGTACTAGAGGAAAAGAGTACTGATGACACCATTGGGTTTGCTAAGAATAGGGATAGCTCAGATAGGGCTTTCTACAAGGAGTTGGTTAAAGTTATTGAAGCATCAGATGTCATTTTGGAGGTTCTTGATGCTCGAGATCCCCTGGGTACACGATGTGTTGATATGGAAAAGATGGTGAGGAAGTCGGGTCCTAATAAGCATCTTGTGTTACTTCTTAACAAAATCGATCTTATCCCACGTGAAGCTGTTGAGAAGTGGCTCACTTATCTTAGGGAGGAGTTGCCAGCTGTTGCCTTCAAATGCAGCACCCAAGAACAAAAATCAAACTTAGGGTGGAAATCGTCCTCTAAAAAATCAAAACCTAGCAACCTTTTGCAGACAAGTGACTGTCTAGGAGCTGAAACTCTTCTTAAATTGTTGAAGAACTATTCAAGAAGTCATGAGATCAAGAAGTCGATTACAGTGGGTATTATTGGCCTACCTAATGTTGGTAAGAGTAGTCTCATTAACAGTTTGAAGAGATGCCGTGTCGTCAATGTTGGTTCCACTCCAGGGTTAACAAGATCACTACAAGAAGTCCAGTTGGATAATAATGTCAAATTGATAGATTGCCCTGGTGTTGTAATGCTCAAATCTACAGAAAATGATGCCTCTATAGCTCTTCGAAATTGCAAAAGAATTGAGAAGTTAGAGGATCCAATTGCTCCAGTGAGGGAAATTTTGAAGCTGTGCCCAGCCAGATTGTTGGTATCTATATACAAGCTCCCAAGCTTTGATACCGTTGATGACTTTCTGCAGAAGGTGGCTACTGTTAGGGGTAAGCTGAAAAAGGGTGGTGTTGTAGATATTGGAGCTGCAGCCAGAATTGTTCTGCATGACTGGAATGAGGGTAAAATTCCGTACTACACTATGCCCCCAGCTAGGAGTCAAGAAGAACCTTCAGAGGCGAAAATTGTTTCGAAGCTGGGCAAGGAGTTGAACATTGACGAAGTATACAATGGAGAATCTTCATTCATTGGAAGCCTCAAATCTGTTAATGATTTCCATCCTGTTGAAGTTCCTCCCAGTTGCCCACTCAATTTTGATGAGGATATGGAAGAGAATAAAAGACCATCAAGTCAAGCTAATGGAAGTCCTAAGGATATGGTTGATGCAGACGATGACCAGTCCATGGCAGTTGAAGAGGATGATTCAGGCAAGGCAAAAGAAAAGACAGCTACCAAAACTAGCAGGCAGAATGAGAAATTGTATGCAGCTGAAGGTATGCTTAATACAAGGAAGAAGAAAGCAGAGAAGAAGATGAGGAAAAAGGCCAAATCAGCTTCCACGGATGCTATGGAAGATGATTATGATTTTAAAGTTGATTACATCAAGAAGGGATCTGCCATGGATGTTGGTGATGGCATTGGGGGAAAAGATGACGGTCAAATTATTGGAAAGGTACCTATGTCTGGTATTGGATTTGATGAACCGGAGGAAGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0036211 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pro_isomerase

Protein Analysis

602

Amino Acids

67.48

Weight (kDa)

9.02

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GN3L_Grn1	PF08701	15 - 90	1e-18	GNL3L/Grn1 putative GTPase
MMR_HSR1	PF01926	262 - 325	1.6e-15	50S ribosome-binding GTPase
FeoB_N	PF02421	262 - 329	7.9e-09	Ferrous iron transport protein B

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008842)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g29630 FvH4_2g29630 FvH4_2g29630 FvH4_2g29630 FvH4_2g29630
malus_domestica	MD08G1145000.v1.1 MD15G1120600.v1.1
prunus_persica	Prupe.1G473300_v2.0.a1
pyrus_communis	pycom08g12230 pycom15g10880
rosa_chinensis	RchiOBHm_Chr6g0298601
rosa_laevigata	RLG00000011500
rosa_multiflora	Rmu_sc0004500.1_g000014
rosa_roxburghii	Rroxscaffold_7G00169500
rosa_rugosa	Rorug06G0281300.1 Rorug06G0281400 Rorug06G0281500 Rorug06G0281600
rosa_samantha	Rh6AG393000 Rh6BG400700 Rh6CG406600 Rh6DG393300
rosa_wichuraiana	Rw6G034350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1440
Acc65I	GGTACC	1 cut(s)	1765
AccB1I	GGYRCC	1 cut(s)	1765
AccB7I	CCANNNNNTGG	1 cut(s)	1495
AccI	GTMKAC	1 cut(s)	1317
AccII	CGCG	1 cut(s)	210
AciI	CCGC	2 cut(s)	208, 250
AclWI	GGATC	4 cut(s)	455, 1013, 1026, 1711
AcsI	RAATTY	2 cut(s)	1041, 1218
AcuI	CTGAAG	3 cut(s)	65, 1248, 1602
AcvI	CACGTG	1 cut(s)	563
AcyI	GRCGYC	1 cut(s)	105
AdeI	CACNNNGTG	1 cut(s)	479
AfaI	GTAC	6 cut(s)	56, 327, 343, 472, 1226, 1767
AfiI	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
AjnI	CCWGG	4 cut(s)	148, 465, 874, 937
Alw21I	GWGCWC	2 cut(s)	84, 189
Alw26I	GTCTC	1 cut(s)	830
AlwI	GGATC	4 cut(s)	455, 1013, 1026, 1711
Ama87I	CYCGRG	1 cut(s)	456
AoxI	GGCC	5 cut(s)	96, 167, 192, 799, 1635
ApeKI	GCWGC	5 cut(s)	245, 627, 1178, 1181, 1577
ApoI	RAATTY	2 cut(s)	1041, 1218
Asp700I	GAANNNNTTC	1 cut(s)	729
Asp718I	GGTACC	1 cut(s)	1765
AspLEI	GCGC	2 cut(s)	129, 212
AspS9I	GGNCC	3 cut(s)	145, 193, 512
AsuHPI	GGTGA	4 cut(s)	73, 85, 511, 1733
AsuII	TTCGAA	2 cut(s)	988, 1283
AvaI	CYCGRG	1 cut(s)	456
AvaII	GGWCC	2 cut(s)	145, 512
AxyI	CCTNAGG	1 cut(s)	1461
BaeGI	GKGCMC	1 cut(s)	1058
BaeI	ACNNNNGTAYC	4 cut(s)	136, 169, 1757, 1790
BamHI	GGATCC	1 cut(s)	1018
BanI	GGYRCC	1 cut(s)	1765
BanII	GRGCYC	2 cut(s)	189, 265
BarI	GAAGNNNNNNTAC	2 cut(s)	38, 70
BauI	CACGAG	1 cut(s)	213
BbrPI	CACGTG	1 cut(s)	563
Bbv12I	GWGCWC	2 cut(s)	84, 189
BbvI	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
BccI	CCATC	4 cut(s)	490, 1377, 1444, 1718
BceAI	ACGGC	1 cut(s)	834
BcgI	CGANNNNNNTGC	2 cut(s)	118, 152
BciT130I	CCWGG	4 cut(s)	150, 467, 876, 939
BciVI	GTATCC	1 cut(s)	164
BcoDI	GTCTC	1 cut(s)	830
BfaI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
BfmI	CTRYAG	4 cut(s)	960, 978, 1118, 1179
BfuI	GTATCC	1 cut(s)	164
BisI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
BlsI	GCNGC	6 cut(s)	209, 247, 629, 1180, 1183, 1579
BmcAI	AGTACT	2 cut(s)	327, 343
Bme1390I	CCNGG	4 cut(s)	150, 467, 876, 939
Bme18I	GGWCC	2 cut(s)	145, 512
BmeT110I	CYCGRG	1 cut(s)	456
BmgT120I	GGNCC	3 cut(s)	145, 193, 512
BmiI	GGNNCC	5 cut(s)	147, 513, 868, 1020, 1767
BmrFI	CCNGG	4 cut(s)	150, 467, 876, 939
BmrI	ACTGGG	1 cut(s)	1383
BmsI	GCATC	7 cut(s)	434, 442, 532, 836, 961, 1465, 1645
BmuI	ACTGGG	1 cut(s)	1383
BplI	GAGNNNNNCTC	2 cut(s)	25, 57
BpmI	CTGGAG	2 cut(s)	858, 1014
Bpu14I	TTCGAA	2 cut(s)	988, 1283
BpuEI	CTTGAG	1 cut(s)	173
Bsa29I	ATCGAT	2 cut(s)	222, 549
BsaAI	YACGTR	1 cut(s)	563
BsaBI	GATNNNNATC	1 cut(s)	1368
BsaHI	GRCGYC	1 cut(s)	105
BsaJI	CCNNGG	9 cut(s)	99, 148, 465, 466, 875, 937, 1494, 1650, 1710
BsaWI	WCCGGW	1 cut(s)	1795
BsaXI	ACNNNNNCTCC	2 cut(s)	293, 323
Bsc4I	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
Bse1I	ACTGG	6 cut(s)	170, 904, 1031, 1208, 1389, 1489
Bse21I	CCTNAGG	1 cut(s)	1461
Bse8I	GATNNNNATC	1 cut(s)	1368
BseBI	CCWGG	4 cut(s)	150, 467, 876, 939
BseCI	ATCGAT	2 cut(s)	222, 549
BseDI	CCNNGG	9 cut(s)	99, 148, 465, 466, 875, 937, 1494, 1650, 1710
BseGI	GGATG	5 cut(s)	325, 1369, 1516, 1660, 1720
BseJI	GATNNNNATC	1 cut(s)	1368
BseLI	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
BseMII	CTCAG	2 cut(s)	278, 396
BseNI	ACTGG	6 cut(s)	170, 904, 1031, 1208, 1389, 1489
BseRI	GAGGAG	1 cut(s)	614
BseSI	GKGCMC	1 cut(s)	1058
BseXI	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
BseYI	CCCAGC	4 cut(s)	277, 1057, 1240, 1288
Bsh1236I	CGCG	1 cut(s)	210
BshFI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BshNI	GGYRCC	1 cut(s)	1765
BshVI	ATCGAT	2 cut(s)	222, 549
BsiHKAI	GWGCWC	2 cut(s)	84, 189
BsiHKCI	CYCGRG	1 cut(s)	456
BsiSI	CCGG	1 cut(s)	1796
BslI	CCNNNNNNNGG	5 cut(s)	812, 876, 1245, 1495, 1775
BsmAI	GTCTC	1 cut(s)	830
BsnI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BsoBI	CYCGRG	1 cut(s)	456
Bsp119I	TTCGAA	2 cut(s)	988, 1283
Bsp1286I	GDGCHC	4 cut(s)	84, 189, 265, 1058
Bsp143I	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
Bsp19I	CCATGG	2 cut(s)	1494, 1710
BspACI	CCGC	2 cut(s)	208, 250
BspANI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BspCNI	CTCAG	2 cut(s)	277, 395
BspDI	ATCGAT	2 cut(s)	222, 549
BspFNI	CGCG	1 cut(s)	210
BspHI	TCATGA	1 cut(s)	763
BspLI	GGNNCC	5 cut(s)	147, 513, 868, 1020, 1767
BspMAI	CTGCAG	2 cut(s)	1122, 1183
BspPI	GGATC	4 cut(s)	455, 1013, 1026, 1711
BspQI	GCTCTTC	1 cut(s)	990
BspT104I	TTCGAA	2 cut(s)	988, 1283
BspT107I	GGYRCC	1 cut(s)	1765
BsrI	ACTGG	6 cut(s)	170, 904, 1031, 1208, 1389, 1489
BssECI	CCNNGG	9 cut(s)	99, 148, 465, 466, 875, 937, 1494, 1650, 1710
BssMI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
BssNAI	GTATAC	1 cut(s)	1318
BssNI	GRCGYC	1 cut(s)	105
BssSI	CACGAG	1 cut(s)	213
BssT1I	CCWWGG	3 cut(s)	99, 1494, 1710
Bst1107I	GTATAC	1 cut(s)	1318
Bst2BI	CACGAG	1 cut(s)	213
Bst2UI	CCWGG	4 cut(s)	150, 467, 876, 939
Bst4CI	ACNGT	6 cut(s)	713, 787, 836, 1105, 1135, 1748
Bst6I	CTCTTC	6 cut(s)	263, 735, 836, 990, 1416, 1500
BstACI	GRCGYC	1 cut(s)	105
BstBAI	YACGTR	1 cut(s)	563
BstBI	TTCGAA	2 cut(s)	988, 1283
BstC8I	GCNNGC	4 cut(s)	205, 250, 609, 1556
BstDEI	CTNAG	6 cut(s)	264, 366, 382, 593, 652, 1461
BstDSI	CCRYGG	3 cut(s)	1494, 1650, 1710
BstF5I	GGATG	5 cut(s)	325, 1369, 1516, 1660, 1720
BstFNI	CGCG	1 cut(s)	210
BstHHI	GCGC	2 cut(s)	129, 212
BstKTI	GATC	6 cut(s)	463, 553, 771, 890, 1021, 1706
BstMAI	GTCTC	1 cut(s)	830
BstMBI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
BstMWI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 980, 1643
BstNI	CCWGG	4 cut(s)	150, 467, 876, 939
BstSCI	CCNGG	4 cut(s)	148, 465, 874, 937
BstSFI	CTRYAG	4 cut(s)	960, 978, 1118, 1179
BstSLI	GKGCMC	1 cut(s)	1058
BstUI	CGCG	1 cut(s)	210
BstV1I	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
BstX2I	RGATCY	3 cut(s)	460, 1018, 1703
BstXI	CCANNNNNNTGG	1 cut(s)	1069
BstYI	RGATCY	3 cut(s)	460, 1018, 1703
BstZ17I	GTATAC	1 cut(s)	1318
Bsu15I	ATCGAT	2 cut(s)	222, 549
Bsu36I	CCTNAGG	1 cut(s)	1461
BsuI	GTATCC	1 cut(s)	164
BsuRI	GGCC	5 cut(s)	98, 169, 194, 801, 1637
BsuTUI	ATCGAT	2 cut(s)	222, 549
BtgI	CCRYGG	3 cut(s)	1494, 1650, 1710
BtsCI	GGATG	5 cut(s)	325, 1369, 1516, 1660, 1720
BtsIMutI	CAGTG	2 cut(s)	792, 1038
Cac8I	GCNNGC	4 cut(s)	205, 250, 609, 1556
CciI	TCATGA	1 cut(s)	763
CfoI	GCGC	2 cut(s)	129, 212
Cfr13I	GGNCC	3 cut(s)	145, 193, 512
ClaI	ATCGAT	2 cut(s)	222, 549
CseI	GACGC	1 cut(s)	113
Csp6I	GTAC	6 cut(s)	55, 326, 342, 471, 1225, 1766
CviAII	CATG	4 cut(s)	764, 1199, 1495, 1711
CviQI	GTAC	6 cut(s)	55, 326, 342, 471, 1225, 1766
DdeI	CTNAG	6 cut(s)	264, 366, 382, 593, 652, 1461
DpnI	GATC	6 cut(s)	462, 552, 770, 889, 1020, 1705
DpnII	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
DraI	TTTAAA	1 cut(s)	1681
DraIII	CACNNNGTG	1 cut(s)	479
DrdI	GACNNNNNNGTC	1 cut(s)	1440
DseDI	GACNNNNNNGTC	1 cut(s)	1440
Eam1104I	CTCTTC	6 cut(s)	263, 735, 836, 990, 1416, 1500
EarI	CTCTTC	6 cut(s)	263, 735, 836, 990, 1416, 1500
Ecl136II	GAGCTC	1 cut(s)	187
Eco130I	CCWWGG	3 cut(s)	99, 1494, 1710
Eco24I	GRGCYC	2 cut(s)	189, 265
Eco47I	GGWCC	2 cut(s)	145, 512
Eco53kI	GAGCTC	1 cut(s)	187
Eco57I	CTGAAG	3 cut(s)	65, 1248, 1602
Eco72I	CACGTG	1 cut(s)	563
Eco81I	CCTNAGG	1 cut(s)	1461
Eco88I	CYCGRG	1 cut(s)	456
EcoICRI	GAGCTC	1 cut(s)	187
EcoO109I	RGGNCCY	3 cut(s)	145, 193, 512
EcoRII	CCWGG	4 cut(s)	148, 465, 874, 937
EcoT14I	CCWWGG	3 cut(s)	99, 1494, 1710
EcoT38I	GRGCYC	2 cut(s)	189, 265
ErhI	CCWWGG	3 cut(s)	99, 1494, 1710
FaeI	CATG	4 cut(s)	767, 1202, 1498, 1714
FalI	AAGNNNNNCTT	4 cut(s)	104, 136, 1575, 1607
FatI	CATG	4 cut(s)	763, 1198, 1494, 1710
FauI	CCCGC	1 cut(s)	257
FblI	GTMKAC	1 cut(s)	1317
Fnu4HI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
FokI	GGATG	5 cut(s)	332, 1356, 1523, 1667, 1727
FriOI	GRGCYC	2 cut(s)	189, 265
Fsp4HI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
FspBI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
GlaI	GCGC	2 cut(s)	128, 211
GluI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
GsaI	CCCAGC	4 cut(s)	281, 1061, 1244, 1292
GsuI	CTGGAG	2 cut(s)	858, 1014
HaeIII	GGCC	5 cut(s)	98, 169, 194, 801, 1637
HapII	CCGG	1 cut(s)	1796
HgaI	GACGC	1 cut(s)	113
HhaI	GCGC	2 cut(s)	129, 212
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	4 cut(s)	767, 1202, 1498, 1714
Hin6I	GCGC	2 cut(s)	127, 210
HinP1I	GCGC	2 cut(s)	127, 210
HincII	GTYRAC	1 cut(s)	882
HindII	GTYRAC	1 cut(s)	882
HindIII	AAGCTT	1 cut(s)	1093
HinfI	GANTC	4 cut(s)	308, 1249, 1328, 1514
HpaI	GTTAAC	1 cut(s)	882
HpaII	CCGG	1 cut(s)	1796
HphI	GGTGA	4 cut(s)	73, 85, 511, 1733
Hpy166II	GTNNAC	3 cut(s)	473, 882, 1318
Hpy188I	TCNGA	5 cut(s)	45, 267, 385, 430, 1267
Hpy188III	TCNNGA	8 cut(s)	139, 449, 458, 756, 764, 772, 1253, 1696
Hpy8I	GTNNAC	3 cut(s)	473, 882, 1318
Hpy99I	CGWCG	1 cut(s)	299
HpyCH4III	ACNGT	6 cut(s)	713, 787, 836, 1105, 1135, 1748
HpyCH4IV	ACGT	1 cut(s)	562
HpyCH4V	TGCA	8 cut(s)	627, 700, 996, 1120, 1181, 1198, 1478, 1577
HpyF10VI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 980, 1643
HpyF3I	CTNAG	6 cut(s)	264, 366, 382, 593, 652, 1461
HpySE526I	ACGT	1 cut(s)	562
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	4 cut(s)	767, 1202, 1498, 1714
HspAI	GCGC	2 cut(s)	127, 210
KpnI	GGTACC	1 cut(s)	1769
KspAI	GTTAAC	1 cut(s)	882
Kzo9I	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
LguI	GCTCTTC	1 cut(s)	990
LmnI	GCTCC	7 cut(s)	79, 178, 184, 719, 1033, 1092, 1175
Lsp1109I	GCAGC	5 cut(s)	232, 639, 1165, 1193, 1589
LweI	GCATC	7 cut(s)	434, 442, 532, 836, 961, 1465, 1645
MaeI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
MaeII	ACGT	1 cut(s)	562
MaeIII	GTNAC	2 cut(s)	531, 707
MalI	GATC	6 cut(s)	462, 552, 770, 889, 1020, 1705
MboI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
MfeI	CAATTG	1 cut(s)	1023
MflI	RGATCY	3 cut(s)	460, 1018, 1703
MhlI	GDGCHC	4 cut(s)	84, 189, 265, 1058
MlyI	GAGTC	2 cut(s)	302, 1258
MmeI	TCCRAC	2 cut(s)	297, 888
MroXI	GAANNNNTTC	1 cut(s)	729
MseI	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
MspA1I	CMGCKG	2 cut(s)	611, 1580
MspI	CCGG	1 cut(s)	1796
MspR9I	CCNGG	4 cut(s)	150, 467, 876, 939
MunI	CAATTG	1 cut(s)	1023
MvaI	CCWGG	4 cut(s)	150, 467, 876, 939
MvnI	CGCG	1 cut(s)	210
MwoI	GCNNNNNNNGC	7 cut(s)	21, 104, 126, 200, 209, 980, 1643
NcoI	CCATGG	2 cut(s)	1494, 1710
NdeII	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
NlaIII	CATG	4 cut(s)	767, 1202, 1498, 1714
NlaIV	GGNNCC	5 cut(s)	147, 513, 868, 1020, 1767
NmeAIII	GCCGAG	1 cut(s)	96
NmuCI	GTSAC	1 cut(s)	707
NspV	TTCGAA	2 cut(s)	988, 1283
PaeR7I	CTCGAG	1 cut(s)	456
PagI	TCATGA	1 cut(s)	763
PasI	CCCWGGG	1 cut(s)	466
PciSI	GCTCTTC	1 cut(s)	990
PcsI	WCGNNNNNNNCGW	3 cut(s)	211, 228, 300
PdmI	GAANNNNTTC	1 cut(s)	729
PfeI	GAWTC	2 cut(s)	1328, 1514
PflMI	CCANNNNNTGG	1 cut(s)	1495
PkrI	GCNGC	6 cut(s)	209, 247, 629, 1180, 1183, 1579
PleI	GAGTC	2 cut(s)	302, 1257
PmaCI	CACGTG	1 cut(s)	563
PmlI	CACGTG	1 cut(s)	563
PpsI	GAGTC	2 cut(s)	302, 1257
Ppu21I	YACGTR	1 cut(s)	563
PpuMI	RGGWCCY	2 cut(s)	145, 512
Psp124BI	GAGCTC	1 cut(s)	189
Psp5II	RGGWCCY	2 cut(s)	145, 512
Psp6I	CCWGG	4 cut(s)	148, 465, 874, 937
PspCI	CACGTG	1 cut(s)	563
PspFI	CCCAGC	4 cut(s)	277, 1057, 1240, 1288
PspGI	CCWGG	4 cut(s)	148, 465, 874, 937
PspN4I	GGNNCC	5 cut(s)	147, 513, 868, 1020, 1767
PspPI	GGNCC	3 cut(s)	145, 193, 512
PspPPI	RGGWCCY	2 cut(s)	145, 512
PstI	CTGCAG	2 cut(s)	1122, 1183
PsuI	RGATCY	3 cut(s)	460, 1018, 1703
PvuII	CAGCTG	2 cut(s)	611, 1580
RsaI	GTAC	6 cut(s)	56, 327, 343, 472, 1226, 1767
RsaNI	GTAC	6 cut(s)	55, 326, 342, 471, 1225, 1766
SacI	GAGCTC	1 cut(s)	189
SapI	GCTCTTC	1 cut(s)	990
SaqAI	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
SatI	GCNGC	6 cut(s)	208, 246, 628, 1179, 1182, 1578
Sau3AI	GATC	6 cut(s)	460, 550, 768, 887, 1018, 1703
Sau96I	GGNCC	3 cut(s)	145, 193, 512
ScaI	AGTACT	2 cut(s)	327, 343
SchI	GAGTC	2 cut(s)	302, 1258
ScrFI	CCNGG	4 cut(s)	150, 467, 876, 939
SduI	GDGCHC	4 cut(s)	84, 189, 265, 1058
SfaNI	GCATC	7 cut(s)	434, 442, 532, 836, 961, 1465, 1645
SfcI	CTRYAG	4 cut(s)	960, 978, 1118, 1179
Sfr274I	CTCGAG	1 cut(s)	456
SfuI	TTCGAA	2 cut(s)	988, 1283
SinI	GGWCC	2 cut(s)	145, 512
SlaI	CTCGAG	1 cut(s)	456
SmlI	CTYRAG	2 cut(s)	188, 456
SmoI	CTYRAG	2 cut(s)	188, 456
SsiI	CCGC	2 cut(s)	208, 250
SspMI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
SstI	GAGCTC	1 cut(s)	189
StyD4I	CCNGG	4 cut(s)	148, 465, 874, 937
StyI	CCWWGG	3 cut(s)	99, 1494, 1710
TaaI	ACNGT	6 cut(s)	713, 787, 836, 1105, 1135, 1748
TaiI	ACGT	1 cut(s)	565
TaqI	TCGA	9 cut(s)	138, 198, 222, 231, 457, 549, 779, 988, 1283
TatI	WGTACW	3 cut(s)	54, 325, 341
TauI	GCSGC	1 cut(s)	210
TfiI	GAWTC	2 cut(s)	1328, 1514
Tru1I	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
Tru9I	TTAA	8 cut(s)	411, 540, 735, 831, 881, 1359, 1593, 1680
TscAI	CASTG	2 cut(s)	792, 1038
TseFI	GTSAC	1 cut(s)	707
TseI	GCWGC	5 cut(s)	245, 627, 1178, 1181, 1577
Tsp45I	GTSAC	1 cut(s)	707
TspDTI	ATGAA	5 cut(s)	240, 336, 1323, 1327, 1806
TspGWI	ACGGA	2 cut(s)	1212, 1667
TspRI	CASTG	2 cut(s)	792, 1038
Van91I	CCANNNNNTGG	1 cut(s)	1495
VpaK11BI	GGWCC	2 cut(s)	145, 512
XapI	RAATTY	2 cut(s)	1041, 1218
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1657
XhoI	CTCGAG	1 cut(s)	456
XmiI	GTMKAC	1 cut(s)	1317
XmnI	GAANNNNTTC	1 cut(s)	729
XspI	CTAG	5 cut(s)	329, 687, 716, 1245, 1551
ZrmI	AGTACT	2 cut(s)	327, 343

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.