MD08G1181400.v1.1
ERF Family

Major Facilitator Superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
OG0013955
Physical Location & Seq
Forward (+)
22497810 .. 22500906
3097 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1181400.v1.1.491

Sequence Viewer

Length: 1569 bp
ATGAAGGCGGAGGCTTTGACTCTGGTTCTGGTCAACTTGGCCGGTATCATGGAGCGAGCCGACGAGTCGTTGCTGCCGGGCGTCTACAAGGAGGTCGGCGCCGCTCTGCACACCGACCCGACCGGGCTCGGCTCGCTCACGCTCTTCCGGTCCATTGTGCAGTCCGCTTGCTACCCAATTGCGGCGTACCTGGCCGTGCGCCACAACCGTGCCCACGTCATTGCCTTCGGCGCCTTCCTCTGGGCCGCCGCTACTTTTCTCGTCGCGTTTTCCTCCACTTTCACCGAGGTGGCTATATCCAGAGCTTTGAATGGGATTGGCCTTGCTCTAGTTGCTCCGGCTATGCAGTCCCTTGTAGCTGACTCAACTGATGACAACAACCGCGGTATGGCTTTTGGATGGCTTCAACTAACTGGCAATGTTGGTTCGATAATTGGTGGCCTTTGTTCGATATTAATAGCTCCAATAACAGTCATGGGTATCCCTGGATGGAGAATTTCCTTTCACCTTGTTGGATTAATTAGTGTTTTAGTTGGTGTTTTAGTCCGTCTGTATGCTACTGACCCACACTTTCCAGATGGCGAAACAAAAGATAGCAGTCAGAATTCCAGTAGTTCCTTGTGGTCACAAGTGAAGGAACTGGCCCTTGAAGCTAGGTCGGTTGTTAAAATTCCTTCTTTCCAGATTATTGTGGCGCAGGGCGTTACTGGTTCGTTTCCCTGGTCAGCATTGTCATTTGCACCCATGTGGTTGGAACTCACTGGCTTCTCTCATGGGAAATCCGCTTTCCTCATCGCCTTGTTCGTGATTGGAAGTTCCCTTGGTGGCTTGTTTGGGGGTAAAATGGGAGATATCCTTTCCACACGTCTTCCAAACGCAGGAAGGATTATACTAGCACAAATAAGCTCCGCAACTGCCATTCCTCTTGCAGCAGTTCTTCTGCTTGCATTACCTGTGGATCCATCTACGCCTGTCATCCATGGTTTCATGTTGTTCTTCATGGGATTCTTTATTTCATGGAATGCTCCGGCTACAAACAATCCCATTTTTGCGGAGATAGTTCCTGAGAGATCGCGAACAAATGTATATGCTTTGGACAGGTCATTCGAGTCCATACTCTCATCATTCGCTCCTCCAGTAGTTGGGATATTGGCTCAACACATGTATGGTTATAAGCCAGTTCGTCAAGGGTCCAGTGCATCGGAAGAGATTACCACGGACAGAGGGAATGCTTTGTCGTTGGCAAAAGCACTATACACAGCAATAGGAATTCCAATGGCTCTCTGTTGTGTCATCTACTCATTCCTATACTGTACCTACCCAAGAGATAGGGAGCGGGCTCGGATGGAGGTTTTAATAGAAGCAGAGATGCAACAAATAGAATTAGAAGATTCGCCTGCTGGAGAAGAATATTCACGTGCTCGGTTTCCAGAGTCGGAAGAGCTGTATGTGACTGATGAAACTGTCATTGATGTGGAGTATGAGGGTGAGGATGCTGCTGGTTCCGATACCGATGAACAGACACTGCTGTACCGCCAGTTAACGTTTGCCAATATGAGCCGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0002165 GO:0003006 GO:0003376 GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0006897 GO:0006915 GO:0006928 GO:0006950 GO:0006996 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007399 GO:0007416 GO:0007417 GO:0007528 GO:0007610 GO:0007617 GO:0007618 GO:0007619 GO:0008150 GO:0008219 GO:0008333 GO:0008347 GO:0008582 GO:0009267 GO:0009605 GO:0009653 GO:0009791 GO:0009886 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010001 GO:0010008 GO:0010623 GO:0010646 GO:0010648 GO:0010876 GO:0010941 GO:0012501 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016477 GO:0019098 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031090 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033554 GO:0035193 GO:0036465 GO:0040007 GO:0040008 GO:0040011 GO:0042063 GO:0042594 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045476 GO:0045477 GO:0045595 GO:0045924 GO:0046624 GO:0046907 GO:0048468 GO:0048477 GO:0048488 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048609 GO:0048638 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0050808 GO:0050896 GO:0051124 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051716 GO:0051960 GO:0051963 GO:0060180 GO:0060284 GO:0065007 GO:0065008 GO:0071496 GO:0071702 GO:0071840 GO:0080171 GO:0090092 GO:0090097 GO:0090099 GO:0090101 GO:0090520 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0099003 GO:0099504 GO:1902742 GO:1904396 GO:1904748 GO:1905879 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 Sugar_tr

Protein Analysis

523

Amino Acids

56.3

Weight (kDa)

4.96

Isoelectric Point (pI)

40.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 13 - 378 4.7e-41 Major Facilitator Superfamily
Sugar_tr PF00083 58 - 181 2e-06 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013955)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78130
fragaria_vesca FvH4_5g37680
malus_domestica MD08G1181400.v1.1
prunus_persica Prupe.1G514700_v2.0.a1 Prupe.1G514700_v2.0.a1
pyrus_communis pycom15g32900
rosa_chinensis RchiOBHm_Chr7g0239341
rosa_laevigata RLG00000000761
rosa_multiflora Rmu_sc0008456.1_g000005
rosa_roxburghii Rroxscaffold_3G00220990
rosa_rugosa Rorug07G0327600 Rorug07G0327700
rosa_samantha Rh7AG480900 Rh7BG453500 Rh7CG498800 Rh7DG466900
rosa_wichuraiana Rw7G040300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
AccB1I GGYRCC 2 cut(s) 98, 230
AccB7I CCANNNNNTGG 1 cut(s) 1142
AccBSI CCGCTC 2 cut(s) 104, 1336
AccI GTMKAC 1 cut(s) 84
AccII CGCG 3 cut(s) 266, 384, 1075
AclI AACGTT 1 cut(s) 1544
AclWI GGATC 2 cut(s) 953, 966
AcoI YGGCCR 2 cut(s) 39, 192
AcsI RAATTY 4 cut(s) 495, 604, 669, 1269
AcvI CACGTG 1 cut(s) 1418
AcyI GRCGYC 3 cut(s) 81, 99, 231
AfaI GTAC 3 cut(s) 188, 1315, 1532
AfiI CCNNNNNNNGG 5 cut(s) 181, 240, 388, 878, 1142
AflIII ACRYGT 2 cut(s) 863, 1161
AgsI TTSAA 3 cut(s) 310, 407, 650
AjiI CACGTC 2 cut(s) 217, 866
AjnI CCWGG 3 cut(s) 189, 484, 719
AleI CACNNNNGTG 3 cut(s) 207, 287, 745
AluBI AGCT 6 cut(s) 305, 359, 461, 653, 906, 1444
AluI AGCT 6 cut(s) 305, 359, 461, 653, 906, 1444
Alw21I GWGCWC 1 cut(s) 1423
AlwI GGATC 2 cut(s) 953, 966
AlwNI CAGNNNCTG 1 cut(s) 1525
AoxI GGCC 6 cut(s) 39, 192, 243, 319, 439, 642
ApeKI GCWGC 3 cut(s) 73, 929, 1496
ApoI RAATTY 4 cut(s) 495, 604, 669, 1269
ArsI GACNNNNNNTTYG 2 cut(s) 1088, 1120
AseI ATTAAT 2 cut(s) 455, 518
AspLEI GCGC 4 cut(s) 101, 201, 233, 697
AspS9I GGNCC 4 cut(s) 150, 243, 643, 1191
AsuC2I CCSGG 3 cut(s) 78, 124, 1562
AsuHPI GGTGA 3 cut(s) 274, 497, 1499
AvaII GGWCC 2 cut(s) 150, 1191
BaeGI GKGCMC 1 cut(s) 214
BaeI ACNNNNGTAYC 2 cut(s) 1514, 1547
BamHI GGATCC 1 cut(s) 958
BanI GGYRCC 2 cut(s) 98, 230
BanII GRGCYC 2 cut(s) 129, 1342
BbrPI CACGTG 1 cut(s) 1418
BbsI GAAGAC 1 cut(s) 860
Bbv12I GWGCWC 1 cut(s) 1423
BbvI GCAGC 3 cut(s) 60, 941, 1483
BccI CCATC 5 cut(s) 393, 483, 572, 970, 1339
BceAI ACGGC 1 cut(s) 179
BciT130I CCWGG 3 cut(s) 191, 486, 721
BciVI GTATCC 1 cut(s) 491
BcnI CCSGG 3 cut(s) 78, 124, 1562
BfaI CTAG 3 cut(s) 329, 654, 893
BfoI RGCGCY 2 cut(s) 102, 234
BfuI GTATCC 1 cut(s) 491
BisI GCNGC 7 cut(s) 74, 102, 183, 246, 249, 930, 1497
BlsI GCNGC 7 cut(s) 75, 103, 184, 247, 250, 931, 1498
Bme1390I CCNGG 6 cut(s) 78, 124, 191, 486, 721, 1562
Bme18I GGWCC 2 cut(s) 150, 1191
BmgBI CACGTC 2 cut(s) 217, 866
BmgT120I GGNCC 4 cut(s) 150, 243, 643, 1191
BmiI GGNNCC 5 cut(s) 100, 232, 960, 1192, 1504
BmrFI CCNGG 6 cut(s) 78, 124, 191, 486, 721, 1562
BmsI GCATC 3 cut(s) 1208, 1359, 1483
BpiI GAAGAC 1 cut(s) 860
BpmI CTGGAG 2 cut(s) 1119, 1422
BpuMI CCSGG 3 cut(s) 78, 124, 1562
BsaAI YACGTR 1 cut(s) 1418
BsaHI GRCGYC 3 cut(s) 81, 99, 231
BsaJI CCNNGG 7 cut(s) 285, 382, 484, 719, 820, 979, 1215
BsaWI WCCGGW 1 cut(s) 147
Bsc4I CCNNNNNNNGG 5 cut(s) 181, 240, 388, 878, 1142
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 9 cut(s) 418, 609, 645, 712, 766, 1136, 1178, 1194, 1537
Bse3DI GCAATG 2 cut(s) 219, 424
BseBI CCWGG 3 cut(s) 191, 486, 721
BseDI CCNNGG 7 cut(s) 285, 382, 484, 719, 820, 979, 1215
BseGI GGATG 5 cut(s) 404, 494, 975, 1350, 1498
BseLI CCNNNNNNNGG 5 cut(s) 181, 240, 388, 878, 1142
BseMI GCAATG 2 cut(s) 219, 424
BseMII CTCAG 1 cut(s) 1056
BseNI ACTGG 9 cut(s) 418, 609, 645, 712, 766, 1136, 1178, 1194, 1537
BseRI GAGGAG 1 cut(s) 1122
BseSI GKGCMC 1 cut(s) 214
BseXI GCAGC 3 cut(s) 60, 941, 1483
BsgI GTGCAG 2 cut(s) 92, 179
Bsh1236I CGCG 3 cut(s) 266, 384, 1075
Bsh1285I CGRYCG 1 cut(s) 123
BshFI GGCC 6 cut(s) 41, 194, 245, 321, 441, 644
BshNI GGYRCC 2 cut(s) 98, 230
BsiEI CGRYCG 1 cut(s) 123
BsiHKAI GWGCWC 1 cut(s) 1423
BsiSI CCGG 7 cut(s) 42, 77, 123, 148, 338, 1028, 1561
BslFI GGGAC 1 cut(s) 334
BslI CCNNNNNNNGG 5 cut(s) 181, 240, 388, 878, 1142
BsmFI GGGAC 1 cut(s) 334
BsmI GAATGC 2 cut(s) 1027, 1234
BsnI GGCC 6 cut(s) 41, 194, 245, 321, 441, 644
Bsp1286I GDGCHC 4 cut(s) 129, 214, 1342, 1423
Bsp143I GATC 2 cut(s) 958, 1070
Bsp19I CCATGG 1 cut(s) 979
Bsp68I TCGCGA 1 cut(s) 1075
BspANI GGCC 6 cut(s) 41, 194, 245, 321, 441, 644
BspCNI CTCAG 1 cut(s) 1057
BspFNI CGCG 3 cut(s) 266, 384, 1075
BspLI GGNNCC 5 cut(s) 100, 232, 960, 1192, 1504
BspPI GGATC 2 cut(s) 953, 966
BspQI GCTCTTC 2 cut(s) 149, 1434
BspT107I GGYRCC 2 cut(s) 98, 230
BsrBI CCGCTC 2 cut(s) 104, 1336
BsrDI GCAATG 2 cut(s) 219, 424
BsrFI RCCGGY 1 cut(s) 41
BsrI ACTGG 9 cut(s) 418, 609, 645, 712, 766, 1136, 1178, 1194, 1537
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 7 cut(s) 285, 382, 484, 719, 820, 979, 1215
BssMI GATC 2 cut(s) 958, 1070
BssNI GRCGYC 3 cut(s) 81, 99, 231
BssT1I CCWWGG 2 cut(s) 820, 979
Bst2UI CCWGG 3 cut(s) 191, 486, 721
Bst4CI ACNGT 4 cut(s) 209, 472, 1313, 1465
Bst6I CTCTTC 3 cut(s) 149, 1200, 1434
BstACI GRCGYC 3 cut(s) 81, 99, 231
BstBAI YACGTR 1 cut(s) 1418
BstC8I GCNNGC 6 cut(s) 57, 134, 169, 945, 1338, 1398
BstDEI CTNAG 1 cut(s) 1065
BstDSI CCRYGG 3 cut(s) 382, 979, 1215
BstF5I GGATG 5 cut(s) 404, 494, 975, 1350, 1498
BstFNI CGCG 3 cut(s) 266, 384, 1075
BstH2I RGCGCY 2 cut(s) 102, 234
BstHHI GCGC 4 cut(s) 101, 201, 233, 697
BstKTI GATC 2 cut(s) 961, 1073
BstMBI GATC 2 cut(s) 958, 1070
BstMCI CGRYCG 1 cut(s) 123
BstMWI GCNNNNNNNGC 5 cut(s) 133, 191, 230, 332, 650
BstNI CCWGG 3 cut(s) 191, 486, 721
BstNSI RCATGY 1 cut(s) 1165
BstSCI CCNGG 6 cut(s) 76, 122, 189, 484, 719, 1560
BstSLI GKGCMC 1 cut(s) 214
BstUI CGCG 3 cut(s) 266, 384, 1075
BstV1I GCAGC 3 cut(s) 60, 941, 1483
BstV2I GAAGAC 1 cut(s) 860
BstX2I RGATCY 1 cut(s) 958
BstXI CCANNNNNNTGG 1 cut(s) 751
BstYI RGATCY 1 cut(s) 958
BsuI GTATCC 1 cut(s) 491
BsuRI GGCC 6 cut(s) 41, 194, 245, 321, 441, 644
BtgI CCRYGG 3 cut(s) 382, 979, 1215
BtgZI GCGATG 1 cut(s) 778
BtrI CACGTC 2 cut(s) 217, 866
BtsCI GGATG 5 cut(s) 404, 494, 975, 1350, 1498
BtsI GCAGTG 1 cut(s) 1523
BtsIMutI CAGTG 3 cut(s) 759, 1201, 1523
BtuMI TCGCGA 1 cut(s) 1075
Cac8I GCNNGC 6 cut(s) 57, 134, 169, 945, 1338, 1398
CaiI CAGNNNCTG 1 cut(s) 1525
CfoI GCGC 4 cut(s) 101, 201, 233, 697
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 4 cut(s) 150, 243, 643, 1191
Cfr42I CCGCGG 1 cut(s) 385
CseI GACGC 1 cut(s) 70
Csp6I GTAC 3 cut(s) 187, 1314, 1531
CviAII CATG 9 cut(s) 49, 475, 745, 773, 980, 988, 1000, 1017, 1162
CviQI GTAC 3 cut(s) 187, 1314, 1531
DdeI CTNAG 1 cut(s) 1065
DinI GGCGCC 2 cut(s) 100, 232
DpnI GATC 2 cut(s) 960, 1072
DpnII GATC 2 cut(s) 958, 1070
EaeI YGGCCR 2 cut(s) 39, 192
Eam1104I CTCTTC 3 cut(s) 149, 1200, 1434
EarI CTCTTC 3 cut(s) 149, 1200, 1434
EciI GGCGGA 1 cut(s) 23
Eco130I CCWWGG 2 cut(s) 820, 979
Eco24I GRGCYC 2 cut(s) 129, 1342
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 2 cut(s) 150, 1191
Eco72I CACGTG 1 cut(s) 1418
EcoRI GAATTC 2 cut(s) 604, 1269
EcoRII CCWGG 3 cut(s) 189, 484, 719
EcoRV GATATC 1 cut(s) 853
EcoT14I CCWWGG 2 cut(s) 820, 979
EcoT38I GRGCYC 2 cut(s) 129, 1342
EgeI GGCGCC 2 cut(s) 100, 232
EheI GGCGCC 2 cut(s) 100, 232
ErhI CCWWGG 2 cut(s) 820, 979
FaeI CATG 9 cut(s) 52, 478, 748, 776, 983, 991, 1003, 1020, 1165
FaqI GGGAC 1 cut(s) 334
FatI CATG 9 cut(s) 48, 474, 744, 772, 979, 987, 999, 1016, 1161
FauI CCCGC 1 cut(s) 1329
FblI GTMKAC 1 cut(s) 84
Fnu4HI GCNGC 7 cut(s) 74, 102, 183, 246, 249, 930, 1497
FokI GGATG 5 cut(s) 411, 501, 962, 1357, 1505
FriOI GRGCYC 2 cut(s) 129, 1342
Fsp4HI GCNGC 7 cut(s) 74, 102, 183, 246, 249, 930, 1497
FspBI CTAG 3 cut(s) 329, 654, 893
GlaI GCGC 4 cut(s) 100, 200, 232, 696
GluI GCNGC 7 cut(s) 74, 102, 183, 246, 249, 930, 1497
GsuI CTGGAG 2 cut(s) 1119, 1422
HaeII RGCGCY 2 cut(s) 102, 234
HaeIII GGCC 6 cut(s) 41, 194, 245, 321, 441, 644
HapII CCGG 7 cut(s) 42, 77, 123, 148, 338, 1028, 1561
HgaI GACGC 1 cut(s) 70
HhaI GCGC 4 cut(s) 101, 201, 233, 697
Hin1I GRCGYC 3 cut(s) 81, 99, 231
Hin1II CATG 9 cut(s) 52, 478, 748, 776, 983, 991, 1003, 1020, 1165
Hin6I GCGC 4 cut(s) 99, 199, 231, 695
HinP1I GCGC 4 cut(s) 99, 199, 231, 695
HincII GTYRAC 2 cut(s) 34, 1542
HindII GTYRAC 2 cut(s) 34, 1542
HinfI GANTC 7 cut(s) 19, 65, 362, 1005, 1109, 1391, 1433
HpaI GTTAAC 1 cut(s) 1542
HpaII CCGG 7 cut(s) 42, 77, 123, 148, 338, 1028, 1561
HphI GGTGA 3 cut(s) 274, 497, 1499
Hpy166II GTNNAC 3 cut(s) 34, 85, 1542
Hpy188I TCNGA 5 cut(s) 603, 1204, 1344, 1438, 1507
Hpy188III TCNNGA 7 cut(s) 300, 575, 682, 805, 1064, 1074, 1430
Hpy8I GTNNAC 3 cut(s) 34, 85, 1542
Hpy99I CGWCG 2 cut(s) 65, 266
HpyAV CCTTC 5 cut(s) 235, 244, 628, 684, 876
HpyCH4III ACNGT 4 cut(s) 209, 472, 1313, 1465
HpyCH4IV ACGT 4 cut(s) 216, 865, 1417, 1544
HpyCH4V TGCA 8 cut(s) 109, 160, 346, 740, 929, 947, 1199, 1372
HpyF10VI GCNNNNNNNGC 5 cut(s) 133, 191, 230, 332, 650
HpyF3I CTNAG 1 cut(s) 1065
HpySE526I ACGT 4 cut(s) 216, 865, 1417, 1544
Hsp92I GRCGYC 3 cut(s) 81, 99, 231
Hsp92II CATG 9 cut(s) 52, 478, 748, 776, 983, 991, 1003, 1020, 1165
HspAI GCGC 4 cut(s) 99, 199, 231, 695
KasI GGCGCC 2 cut(s) 98, 230
KspAI GTTAAC 1 cut(s) 1542
KspI CCGCGG 1 cut(s) 385
Kzo9I GATC 2 cut(s) 958, 1070
LguI GCTCTTC 2 cut(s) 149, 1434
LmnI GCTCC 7 cut(s) 52, 340, 466, 911, 1030, 1135, 1333
Lsp1109I GCAGC 3 cut(s) 60, 941, 1483
LweI GCATC 3 cut(s) 1208, 1359, 1483
MaeI CTAG 3 cut(s) 329, 654, 893
MaeII ACGT 4 cut(s) 216, 865, 1417, 1544
MaeIII GTNAC 3 cut(s) 624, 703, 1450
MalI GATC 2 cut(s) 960, 1072
MbiI CCGCTC 2 cut(s) 104, 1336
MboI GATC 2 cut(s) 958, 1070
MboII GAAGA 8 cut(s) 136, 860, 929, 988, 1217, 1400, 1418, 1451
MfeI CAATTG 1 cut(s) 177
MflI RGATCY 1 cut(s) 958
MhlI GDGCHC 4 cut(s) 129, 214, 1342, 1423
MluCI AATT 8 cut(s) 177, 432, 495, 519, 604, 669, 1269, 1382
Mly113I GGCGCC 2 cut(s) 99, 231
MlyI GAGTC 5 cut(s) 13, 74, 356, 1118, 1442
MmeI TCCRAC 3 cut(s) 493, 732, 1416
MseI TTAA 5 cut(s) 455, 518, 666, 1355, 1541
MslI CAYNNNNRTG 5 cut(s) 207, 287, 745, 1164, 1472
MspA1I CMGCKG 1 cut(s) 384
MspI CCGG 7 cut(s) 42, 77, 123, 148, 338, 1028, 1561
MspR9I CCNGG 6 cut(s) 78, 124, 191, 486, 721, 1562
MunI CAATTG 1 cut(s) 177
Mva1269I GAATGC 2 cut(s) 1027, 1234
MvaI CCWGG 3 cut(s) 191, 486, 721
MvnI CGCG 3 cut(s) 266, 384, 1075
MwoI GCNNNNNNNGC 5 cut(s) 133, 191, 230, 332, 650
NarI GGCGCC 2 cut(s) 99, 231
NciI CCSGG 3 cut(s) 78, 124, 1562
NcoI CCATGG 1 cut(s) 979
NdeII GATC 2 cut(s) 958, 1070
NlaIII CATG 9 cut(s) 52, 478, 748, 776, 983, 991, 1003, 1020, 1165
NlaIV GGNNCC 5 cut(s) 100, 232, 960, 1192, 1504
NmeAIII GCCGAG 1 cut(s) 108
NmuCI GTSAC 2 cut(s) 624, 1450
NruI TCGCGA 1 cut(s) 1075
NspI RCATGY 1 cut(s) 1165
OliI CACNNNNGTG 3 cut(s) 207, 287, 745
PciI ACATGT 1 cut(s) 1161
PciSI GCTCTTC 2 cut(s) 149, 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 801
PctI GAATGC 2 cut(s) 1027, 1234
PfeI GAWTC 2 cut(s) 1005, 1391
PflMI CCANNNNNTGG 1 cut(s) 1142
PkrI GCNGC 7 cut(s) 75, 103, 184, 247, 250, 931, 1498
PleI GAGTC 5 cut(s) 13, 73, 356, 1117, 1441
PluTI GGCGCC 2 cut(s) 102, 234
PmaCI CACGTG 1 cut(s) 1418
PmlI CACGTG 1 cut(s) 1418
PpsI GAGTC 5 cut(s) 13, 73, 356, 1117, 1441
Ppu21I YACGTR 1 cut(s) 1418
PscI ACATGT 1 cut(s) 1161
PshBI ATTAAT 2 cut(s) 455, 518
PsiI TTATAA 1 cut(s) 1173
Psp1406I AACGTT 1 cut(s) 1544
Psp6I CCWGG 3 cut(s) 189, 484, 719
PspCI CACGTG 1 cut(s) 1418
PspGI CCWGG 3 cut(s) 189, 484, 719
PspN4I GGNNCC 5 cut(s) 100, 232, 960, 1192, 1504
PspPI GGNCC 4 cut(s) 150, 243, 643, 1191
PstNI CAGNNNCTG 1 cut(s) 1525
PsuI RGATCY 1 cut(s) 958
RruI TCGCGA 1 cut(s) 1075
RsaI GTAC 3 cut(s) 188, 1315, 1532
RsaNI GTAC 3 cut(s) 187, 1314, 1531
RseI CAYNNNNRTG 5 cut(s) 207, 287, 745, 1164, 1472
SacII CCGCGG 1 cut(s) 385
SapI GCTCTTC 2 cut(s) 149, 1434
SaqAI TTAA 5 cut(s) 455, 518, 666, 1355, 1541
SatI GCNGC 7 cut(s) 74, 102, 183, 246, 249, 930, 1497
Sau3AI GATC 2 cut(s) 958, 1070
Sau96I GGNCC 4 cut(s) 150, 243, 643, 1191
SchI GAGTC 5 cut(s) 13, 74, 356, 1118, 1442
ScrFI CCNGG 6 cut(s) 78, 124, 191, 486, 721, 1562
SduI GDGCHC 4 cut(s) 129, 214, 1342, 1423
SfaNI GCATC 3 cut(s) 1208, 1359, 1483
SfoI GGCGCC 2 cut(s) 100, 232
Sfr303I CCGCGG 1 cut(s) 385
SgrBI CCGCGG 1 cut(s) 385
SinI GGWCC 2 cut(s) 150, 1191
SmiMI CAYNNNNRTG 5 cut(s) 207, 287, 745, 1164, 1472
Sse9I AATT 8 cut(s) 177, 432, 495, 519, 604, 669, 1269, 1382
SspDI GGCGCC 2 cut(s) 98, 230
SspI AATATT 1 cut(s) 1412
SspMI CTAG 3 cut(s) 329, 654, 893
StyD4I CCNGG 6 cut(s) 76, 122, 189, 484, 719, 1560
StyI CCWWGG 2 cut(s) 820, 979
TaaI ACNGT 4 cut(s) 209, 472, 1313, 1465
TaiI ACGT 4 cut(s) 219, 868, 1420, 1547
TaqI TCGA 3 cut(s) 428, 449, 1107
TasI AATT 8 cut(s) 177, 432, 495, 519, 604, 669, 1269, 1382
TauI GCSGC 4 cut(s) 104, 185, 248, 251
TfiI GAWTC 2 cut(s) 1005, 1391
Tru1I TTAA 5 cut(s) 455, 518, 666, 1355, 1541
Tru9I TTAA 5 cut(s) 455, 518, 666, 1355, 1541
TscAI CASTG 3 cut(s) 766, 1201, 1530
TseFI GTSAC 2 cut(s) 624, 1450
TseI GCWGC 3 cut(s) 73, 929, 1496
Tsp45I GTSAC 2 cut(s) 624, 1450
TspDTI ATGAA 6 cut(s) 17, 976, 988, 1005, 1473, 1530
TspGWI ACGGA 2 cut(s) 536, 1232
TspRI CASTG 3 cut(s) 766, 1201, 1530
Van91I CCANNNNNTGG 1 cut(s) 1142
VpaK11BI GGWCC 2 cut(s) 150, 1191
VspI ATTAAT 2 cut(s) 455, 518
XapI RAATTY 4 cut(s) 495, 604, 669, 1269
XceI RCATGY 1 cut(s) 1165
XmiI GTMKAC 1 cut(s) 84
XspI CTAG 3 cut(s) 329, 654, 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.