RchiOBHm_Chr7g0239341
ERF Family

Major Facilitator Superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0013955
Physical Location & Seq
Reverse (-)
64805799 .. 64808884
3086 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ21448

Sequence Viewer

Length: 1593 bp
ATGAAACTGAGATTCAGAATGGAGCCCGAGACGTTGACCCTGGTGCTGGTCAACCTCGCCGGGATCATGGAGCGAGCCGACGAGTCGTTACTTCCTGGTGTGTACAAGGAGGTCGGTGCGGCTCTTCACACCGACCCGACTGGGCTCGGGTCGCTCACTCTTTTCCGGTCCATGGTCCAGTCCCTCTGTTACCCCATCGCGGCTTACCTGGCCGTGCGTCACAACCGGGCCCACGTCATCGCCCTCGGCGCCTTTCTCTGGGCCGCCGCCACTTTTCTCGTCGCGTTTTCCTCCACTTTCTATCAGGTGGCTATATCCAGAGCTTTGAATGGGATTGGTCTTGCTCTAGTTGCTCCTGCTATGCAGTCCCTTGTGGCCGACTCAACTGATGATAGCAGCCGGGGTACGGCTTTTGGGTGGCTTCAGCTAACTGGCAACATTGGTTCGATAATTGGTGGCCTTTGCTCAATACTGATAGCTCCATTGACGATCATGGGGATCCCTGGTTGGAGGATTTCCTTTCATCTTGTTGGACTGATTAGTGTTGTAGTAGGTATTTTAGTCCGTATATATGCCACTGATCCACATTTTCCAGAGGGTGCAACAAAAGAAAGCAGTCAGACTCCTAGTAAATCGTTTTTGTCAGAAGTTAAGGAGCTGGCTAAAGAAGCTAAGTCGGTTATTAAAATCCCTTCTTTCCAGATTGTTGTGGCACAGGGTGTTACCGGCTCGTTTCCTTGGTCAGCATTGTCATTTGCGCCAATGTGGCTGGAACTTACTGGCTTTTCTCATGGGAAATCCGCTTTCCTCATTGCCTTGTTTGTGATTGGTAGTTCTCTTGGGGGTGTATTTGGAGGTAAAATGGGGGATATCTTATCGGTGCGTTTTCCAAATGCTGGAAGGATAATTCTAGCACAGATAAGCTCAGCGTCTGCAATACCTCTTGCAGCAATTCTGCTGCTTGTTTTGCCTGATGATCCATCCACAGCTGTCATCCATGGTTTAGTTTTGTTCATCATGGGATTCTTAATATCTTGGAATGCTCCAGCTGCAAACAATCCAATTTTTGCTGAGATAGTTCCTGAGAGATCCCGAACAAATGTATATGCTCTGGACAGATCTTTTGAGTCCATACTCTCGTCATTTGCTCCTCCAATAGTTGGGATTTTGGCACAGCATGTTTATGGTTATAAACCAGTTGCTGCAGGGTCCAGCACATCTGAAGAGATCGCCACAGATAGAGGGAATGCATCATCTTTGGCAAAAGCACTGTACACAGCAATCGGAATTCCAATGGCTCTGTGTTGTGTTATATACTCGTTCCTATACTGCACCTACCCAAGAGACAGGGAGCGTGCTCGAATGGAGGTTTTAATAGAGTCAGAGATGCAACAAATAGAACTAGAAAATTCACCTAGAGGAGGAGAACATTCAGAGATGCACTTTCCTGAGTCGGAAGAATTATTTGTGAATGATAGAACTGTCATTGACTTGGAGTATGAGGGTGAGAAAGACCTTGTTGGTGATGCTGAGGATGATGAACAGGTGTTGCTTTACCGCCAGTTGACCTTCGCCAATATGAGCCGGGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0002165 GO:0003006 GO:0003376 GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0006897 GO:0006915 GO:0006928 GO:0006950 GO:0006996 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007399 GO:0007416 GO:0007417 GO:0007528 GO:0007610 GO:0007617 GO:0007618 GO:0007619 GO:0008150 GO:0008219 GO:0008333 GO:0008347 GO:0008582 GO:0009267 GO:0009605 GO:0009653 GO:0009791 GO:0009886 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010001 GO:0010008 GO:0010623 GO:0010646 GO:0010648 GO:0010876 GO:0010941 GO:0012501 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016477 GO:0019098 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031090 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033554 GO:0035193 GO:0036465 GO:0040007 GO:0040008 GO:0040011 GO:0042063 GO:0042594 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045476 GO:0045477 GO:0045595 GO:0045924 GO:0046624 GO:0046907 GO:0048468 GO:0048477 GO:0048488 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048609 GO:0048638 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0050808 GO:0050896 GO:0051124 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051716 GO:0051960 GO:0051963 GO:0060180 GO:0060284 GO:0065007 GO:0065008 GO:0071496 GO:0071702 GO:0071840 GO:0080171 GO:0090092 GO:0090097 GO:0090099 GO:0090101 GO:0090520 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0099003 GO:0099504 GO:1902742 GO:1904396 GO:1904748 GO:1905879 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 Sugar_tr

Protein Analysis

530

Amino Acids

57.24

Weight (kDa)

5.27

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 19 - 384 1.6e-40 Major Facilitator Superfamily
Sugar_tr PF00083 66 - 190 1.3e-06 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013955)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78130
fragaria_vesca FvH4_5g37680
malus_domestica MD08G1181400.v1.1
prunus_persica Prupe.1G514700_v2.0.a1 Prupe.1G514700_v2.0.a1
pyrus_communis pycom15g32900
rosa_chinensis RchiOBHm_Chr7g0239341
rosa_laevigata RLG00000000761
rosa_multiflora Rmu_sc0008456.1_g000005
rosa_roxburghii Rroxscaffold_3G00220990
rosa_rugosa Rorug07G0327600 Rorug07G0327700
rosa_samantha Rh7AG480900 Rh7BG453500 Rh7CG498800 Rh7DG466900
rosa_wichuraiana Rw7G040300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AccB1I GGYRCC 1 cut(s) 248
AccB7I CCANNNNNTGG 2 cut(s) 896, 1160
AccII CGCG 2 cut(s) 200, 284
AciI CCGC 6 cut(s) 119, 200, 264, 267, 801, 1558
AclWI GGATC 6 cut(s) 71, 493, 506, 575, 971, 1083
AcoI YGGCCR 2 cut(s) 210, 375
AcsI RAATTY 2 cut(s) 1287, 1408
AcuI CTGAAG 2 cut(s) 407, 1242
AcyI GRCGYC 1 cut(s) 249
AdeI CACNNNGTG 1 cut(s) 719
AfaI GTAC 3 cut(s) 104, 406, 1274
AfiI CCNNNNNNNGG 8 cut(s) 46, 172, 199, 258, 406, 896, 1160, 1421
AgsI TTSAA 1 cut(s) 328
AjiI CACGTC 1 cut(s) 235
AjnI CCWGG 4 cut(s) 39, 94, 207, 502
AluBI AGCT 8 cut(s) 323, 427, 479, 658, 671, 924, 989, 1049
AluI AGCT 8 cut(s) 323, 427, 479, 658, 671, 924, 989, 1049
Alw21I GWGCWC 1 cut(s) 1360
Alw26I GTCTC 2 cut(s) 23, 1338
AlwI GGATC 6 cut(s) 71, 493, 506, 575, 971, 1083
AlwNI CAGNNNCTG 2 cut(s) 932, 1202
Ama87I CYCGRG 2 cut(s) 26, 146
AoxI GGCC 5 cut(s) 210, 228, 261, 375, 457
ApaI GGGCCC 1 cut(s) 232
ApeKI GCWGC 5 cut(s) 396, 947, 958, 1049, 1202
ApoI RAATTY 2 cut(s) 1287, 1408
ArsI GACNNNNNNTTYG 2 cut(s) 1106, 1138
AspLEI GCGC 2 cut(s) 251, 760
AspS9I GGNCC 6 cut(s) 168, 175, 228, 229, 261, 1209
AsuC2I CCSGG 4 cut(s) 61, 227, 401, 1586
AsuHPI GGTGA 3 cut(s) 1404, 1517, 1535
AvaI CYCGRG 2 cut(s) 26, 146
AvaII GGWCC 3 cut(s) 168, 175, 1209
BaeGI GKGCMC 1 cut(s) 232
BamHI GGATCC 1 cut(s) 498
BanI GGYRCC 1 cut(s) 248
BanII GRGCYC 3 cut(s) 27, 147, 232
Bbv12I GWGCWC 1 cut(s) 1360
BbvCI CCTCAGC 1 cut(s) 1530
BbvI GCAGC 5 cut(s) 408, 945, 959, 1036, 1189
BccI CCATC 2 cut(s) 203, 988
BceAI ACGGC 2 cut(s) 197, 423
BciT130I CCWGG 4 cut(s) 41, 96, 209, 504
BcnI CCSGG 4 cut(s) 61, 227, 401, 1586
BcoDI GTCTC 2 cut(s) 23, 1338
BfaI CTAG 5 cut(s) 347, 627, 911, 1403, 1416
BfmI CTRYAG 1 cut(s) 1203
BfoI RGCGCY 1 cut(s) 252
BglI GCCNNNNNGGC 1 cut(s) 766
BglII AGATCT 1 cut(s) 1118
BisI GCNGC 9 cut(s) 120, 201, 264, 267, 397, 948, 959, 1050, 1203
BlpI GCTNAGC 1 cut(s) 925
BlsI GCNGC 9 cut(s) 121, 202, 265, 268, 398, 949, 960, 1051, 1204
Bme1390I CCNGG 8 cut(s) 41, 61, 96, 209, 227, 401, 504, 1586
Bme18I GGWCC 3 cut(s) 168, 175, 1209
BmeT110I CYCGRG 2 cut(s) 26, 146
BmgBI CACGTC 1 cut(s) 235
BmgT120I GGNCC 6 cut(s) 168, 175, 228, 229, 261, 1209
BmiI GGNNCC 5 cut(s) 24, 230, 250, 500, 1210
BmrFI CCNGG 8 cut(s) 41, 61, 96, 209, 227, 401, 504, 1586
BmrI ACTGGG 1 cut(s) 150
BmsI GCATC 4 cut(s) 1259, 1377, 1428, 1516
BmuI ACTGGG 1 cut(s) 150
BpmI CTGGAG 1 cut(s) 1029
Bpu10I CCTNAGC 1 cut(s) 1530
Bpu1102I GCTNAGC 1 cut(s) 925
BpuMI CCSGG 4 cut(s) 61, 227, 401, 1586
BsaHI GRCGYC 1 cut(s) 249
BsaJI CCNNGG 7 cut(s) 39, 171, 244, 400, 502, 737, 997
BsaWI WCCGGW 1 cut(s) 165
Bsc4I CCNNNNNNNGG 8 cut(s) 46, 172, 199, 258, 406, 896, 1160, 1421
Bse118I RCCGGY 1 cut(s) 725
Bse1I ACTGG 6 cut(s) 145, 178, 436, 784, 1196, 1561
Bse3DI GCAATG 1 cut(s) 810
BseBI CCWGG 4 cut(s) 41, 96, 209, 504
BseDI CCNNGG 7 cut(s) 39, 171, 244, 400, 502, 737, 997
BseGI GGATG 3 cut(s) 980, 993, 1540
BseLI CCNNNNNNNGG 8 cut(s) 46, 172, 199, 258, 406, 896, 1160, 1421
BseMI GCAATG 1 cut(s) 810
BseMII CTCAG 5 cut(s) 939, 1062, 1074, 1440, 1521
BseNI ACTGG 6 cut(s) 145, 178, 436, 784, 1196, 1561
BseRI GAGGAG 3 cut(s) 1140, 1434, 1437
BseSI GKGCMC 1 cut(s) 232
BseXI GCAGC 5 cut(s) 408, 945, 959, 1036, 1189
BsgI GTGCAG 1 cut(s) 1315
Bsh1236I CGCG 2 cut(s) 200, 284
BshFI GGCC 5 cut(s) 212, 230, 263, 377, 459
BshNI GGYRCC 1 cut(s) 248
BsiHKAI GWGCWC 1 cut(s) 1360
BsiHKCI CYCGRG 2 cut(s) 26, 146
BsiSI CCGG 6 cut(s) 60, 166, 226, 400, 726, 1585
BslFI GGGAC 2 cut(s) 166, 352
BslI CCNNNNNNNGG 8 cut(s) 46, 172, 199, 258, 406, 896, 1160, 1421
BsmAI GTCTC 2 cut(s) 23, 1338
BsmBI CGTCTC 1 cut(s) 23
BsmFI GGGAC 2 cut(s) 166, 352
BsmI GAATGC 2 cut(s) 1045, 1252
BsnI GGCC 5 cut(s) 212, 230, 263, 377, 459
BsoBI CYCGRG 2 cut(s) 26, 146
Bsp120I GGGCCC 1 cut(s) 228
Bsp1286I GDGCHC 4 cut(s) 27, 147, 232, 1360
Bsp1407I TGTACA 2 cut(s) 102, 1272
Bsp143I GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
Bsp1720I GCTNAGC 1 cut(s) 925
Bsp19I CCATGG 2 cut(s) 171, 997
BspACI CCGC 6 cut(s) 119, 200, 264, 267, 801, 1558
BspANI GGCC 5 cut(s) 212, 230, 263, 377, 459
BspCNI CTCAG 5 cut(s) 938, 1063, 1075, 1441, 1522
BspFNI CGCG 2 cut(s) 200, 284
BspLI GGNNCC 5 cut(s) 24, 230, 250, 500, 1210
BspMAI CTGCAG 1 cut(s) 1207
BspPI GGATC 6 cut(s) 71, 493, 506, 575, 971, 1083
BspQI GCTCTTC 1 cut(s) 129
BspT107I GGYRCC 1 cut(s) 248
BsrDI GCAATG 1 cut(s) 810
BsrFI RCCGGY 1 cut(s) 725
BsrGI TGTACA 2 cut(s) 102, 1272
BsrI ACTGG 6 cut(s) 145, 178, 436, 784, 1196, 1561
BssAI RCCGGY 1 cut(s) 725
BssECI CCNNGG 7 cut(s) 39, 171, 244, 400, 502, 737, 997
BssMI GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
BssNI GRCGYC 1 cut(s) 249
BssT1I CCWWGG 3 cut(s) 171, 737, 997
Bst2UI CCWGG 4 cut(s) 41, 96, 209, 504
Bst4CI ACNGT 2 cut(s) 1272, 1483
Bst6I CTCTTC 2 cut(s) 129, 1218
BstACI GRCGYC 1 cut(s) 249
BstAUI TGTACA 2 cut(s) 102, 1272
BstC8I GCNNGC 3 cut(s) 75, 660, 1356
BstDEI CTNAG 7 cut(s) 8, 672, 925, 1071, 1083, 1449, 1530
BstDSI CCRYGG 2 cut(s) 171, 997
BstENI CCTNNNNNAGG 1 cut(s) 1419
BstF5I GGATG 3 cut(s) 980, 993, 1540
BstFNI CGCG 2 cut(s) 200, 284
BstH2I RGCGCY 1 cut(s) 252
BstHHI GCGC 2 cut(s) 251, 760
BstKTI GATC 8 cut(s) 66, 492, 501, 583, 979, 1091, 1121, 1230
BstMAI GTCTC 2 cut(s) 23, 1338
BstMBI GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
BstMWI GCNNNNNNNGC 8 cut(s) 151, 209, 248, 350, 668, 766, 967, 1049
BstNI CCWGG 4 cut(s) 41, 96, 209, 504
BstNSI RCATGY 1 cut(s) 1181
BstSCI CCNGG 8 cut(s) 39, 59, 94, 207, 225, 399, 502, 1584
BstSFI CTRYAG 1 cut(s) 1203
BstSLI GKGCMC 1 cut(s) 232
BstUI CGCG 2 cut(s) 200, 284
BstV1I GCAGC 5 cut(s) 408, 945, 959, 1036, 1189
BstX2I RGATCY 3 cut(s) 498, 1088, 1118
BstYI RGATCY 3 cut(s) 498, 1088, 1118
BsuRI GGCC 5 cut(s) 212, 230, 263, 377, 459
BtgI CCRYGG 2 cut(s) 171, 997
BtgZI GCGATG 2 cut(s) 181, 223
BtrI CACGTC 1 cut(s) 235
BtsCI GGATG 3 cut(s) 980, 993, 1540
BtsIMutI CAGTG 2 cut(s) 576, 1268
Cac8I GCNNGC 3 cut(s) 75, 660, 1356
CaiI CAGNNNCTG 2 cut(s) 932, 1202
CfoI GCGC 2 cut(s) 251, 760
Cfr10I RCCGGY 1 cut(s) 725
Cfr13I GGNCC 6 cut(s) 168, 175, 228, 229, 261, 1209
CseI GACGC 2 cut(s) 206, 918
Csp6I GTAC 3 cut(s) 103, 405, 1273
CviAII CATG 7 cut(s) 67, 172, 493, 791, 998, 1018, 1178
CviQI GTAC 3 cut(s) 103, 405, 1273
DdeI CTNAG 7 cut(s) 8, 672, 925, 1071, 1083, 1449, 1530
DinI GGCGCC 1 cut(s) 250
DpnI GATC 8 cut(s) 65, 491, 500, 582, 978, 1090, 1120, 1229
DpnII GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
DraIII CACNNNGTG 1 cut(s) 719
EaeI YGGCCR 2 cut(s) 210, 375
Eam1104I CTCTTC 2 cut(s) 129, 1218
EarI CTCTTC 2 cut(s) 129, 1218
Eco130I CCWWGG 3 cut(s) 171, 737, 997
Eco24I GRGCYC 3 cut(s) 27, 147, 232
Eco32I GATATC 1 cut(s) 871
Eco47I GGWCC 3 cut(s) 168, 175, 1209
Eco57I CTGAAG 2 cut(s) 407, 1242
Eco88I CYCGRG 2 cut(s) 26, 146
EcoNI CCTNNNNNAGG 1 cut(s) 1419
EcoRI GAATTC 1 cut(s) 1287
EcoRII CCWGG 4 cut(s) 39, 94, 207, 502
EcoRV GATATC 1 cut(s) 871
EcoT14I CCWWGG 3 cut(s) 171, 737, 997
EcoT22I ATGCAT 1 cut(s) 1252
EcoT38I GRGCYC 3 cut(s) 27, 147, 232
EgeI GGCGCC 1 cut(s) 250
EheI GGCGCC 1 cut(s) 250
ErhI CCWWGG 3 cut(s) 171, 737, 997
Esp3I CGTCTC 1 cut(s) 23
FaeI CATG 7 cut(s) 70, 175, 496, 794, 1001, 1021, 1181
FaqI GGGAC 2 cut(s) 166, 352
FatI CATG 7 cut(s) 66, 171, 492, 790, 997, 1017, 1177
Fnu4HI GCNGC 9 cut(s) 120, 201, 264, 267, 397, 948, 959, 1050, 1203
FokI GGATG 3 cut(s) 967, 980, 1547
FriOI GRGCYC 3 cut(s) 27, 147, 232
Fsp4HI GCNGC 9 cut(s) 120, 201, 264, 267, 397, 948, 959, 1050, 1203
FspBI CTAG 5 cut(s) 347, 627, 911, 1403, 1416
GlaI GCGC 2 cut(s) 250, 759
GluI GCNGC 9 cut(s) 120, 201, 264, 267, 397, 948, 959, 1050, 1203
GsuI CTGGAG 1 cut(s) 1029
HaeII RGCGCY 1 cut(s) 252
HaeIII GGCC 5 cut(s) 212, 230, 263, 377, 459
HapII CCGG 6 cut(s) 60, 166, 226, 400, 726, 1585
HgaI GACGC 2 cut(s) 206, 918
HhaI GCGC 2 cut(s) 251, 760
Hin1I GRCGYC 1 cut(s) 249
Hin1II CATG 7 cut(s) 70, 175, 496, 794, 1001, 1021, 1181
Hin6I GCGC 2 cut(s) 249, 758
HinP1I GCGC 2 cut(s) 249, 758
HincII GTYRAC 3 cut(s) 36, 52, 1566
HindII GTYRAC 3 cut(s) 36, 52, 1566
HinfI GANTC 8 cut(s) 12, 83, 380, 622, 1023, 1127, 1379, 1451
HpaII CCGG 6 cut(s) 60, 166, 226, 400, 726, 1585
HphI GGTGA 3 cut(s) 1404, 1517, 1535
Hpy166II GTNNAC 5 cut(s) 36, 52, 103, 1275, 1566
Hpy188I TCNGA 8 cut(s) 17, 621, 646, 1222, 1286, 1384, 1435, 1456
Hpy188III TCNNGA 7 cut(s) 318, 593, 700, 1082, 1092, 1112, 1448
Hpy8I GTNNAC 5 cut(s) 36, 52, 103, 1275, 1566
Hpy99I CGWCG 2 cut(s) 83, 284
HpyAV CCTTC 3 cut(s) 702, 894, 1579
HpyCH4III ACNGT 2 cut(s) 1272, 1483
HpyCH4IV ACGT 2 cut(s) 32, 234
HpyF10VI GCNNNNNNNGC 8 cut(s) 151, 209, 248, 350, 668, 766, 967, 1049
HpyF3I CTNAG 7 cut(s) 8, 672, 925, 1071, 1083, 1449, 1530
HpySE526I ACGT 2 cut(s) 32, 234
Hsp92I GRCGYC 1 cut(s) 249
Hsp92II CATG 7 cut(s) 70, 175, 496, 794, 1001, 1021, 1181
HspAI GCGC 2 cut(s) 249, 758
KasI GGCGCC 1 cut(s) 248
Kzo9I GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 8 cut(s) 22, 70, 358, 484, 655, 1048, 1153, 1351
Lsp1109I GCAGC 5 cut(s) 408, 945, 959, 1036, 1189
LweI GCATC 4 cut(s) 1259, 1377, 1428, 1516
MaeI CTAG 5 cut(s) 347, 627, 911, 1403, 1416
MaeII ACGT 2 cut(s) 32, 234
MaeIII GTNAC 4 cut(s) 87, 188, 218, 721
MalI GATC 8 cut(s) 65, 491, 500, 582, 978, 1090, 1120, 1229
MboI GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
MboII GAAGA 3 cut(s) 116, 1235, 1469
MflI RGATCY 3 cut(s) 498, 1088, 1118
MhlI GDGCHC 4 cut(s) 27, 147, 232, 1360
MluCI AATT 7 cut(s) 450, 906, 951, 1062, 1287, 1408, 1460
Mly113I GGCGCC 1 cut(s) 249
MlyI GAGTC 6 cut(s) 92, 374, 616, 1136, 1388, 1460
MmeI TCCRAC 3 cut(s) 488, 511, 1434
Mph1103I ATGCAT 1 cut(s) 1252
MseI TTAA 4 cut(s) 651, 684, 1028, 1373
MslI CAYNNNNRTG 1 cut(s) 1182
MspA1I CMGCKG 2 cut(s) 989, 1049
MspI CCGG 6 cut(s) 60, 166, 226, 400, 726, 1585
MspR9I CCNGG 8 cut(s) 41, 61, 96, 209, 227, 401, 504, 1586
Mva1269I GAATGC 2 cut(s) 1045, 1252
MvaI CCWGG 4 cut(s) 41, 96, 209, 504
MvnI CGCG 2 cut(s) 200, 284
MwoI GCNNNNNNNGC 8 cut(s) 151, 209, 248, 350, 668, 766, 967, 1049
NarI GGCGCC 1 cut(s) 249
NciI CCSGG 4 cut(s) 61, 227, 401, 1586
NcoI CCATGG 2 cut(s) 171, 997
NdeII GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
NlaIII CATG 7 cut(s) 70, 175, 496, 794, 1001, 1021, 1181
NlaIV GGNNCC 5 cut(s) 24, 230, 250, 500, 1210
NmeAIII GCCGAG 1 cut(s) 225
NmuCI GTSAC 1 cut(s) 218
NsiI ATGCAT 1 cut(s) 1252
NspI RCATGY 1 cut(s) 1181
PciSI GCTCTTC 1 cut(s) 129
PctI GAATGC 2 cut(s) 1045, 1252
PfeI GAWTC 2 cut(s) 12, 1023
PflMI CCANNNNNTGG 2 cut(s) 896, 1160
PkrI GCNGC 9 cut(s) 121, 202, 265, 268, 398, 949, 960, 1051, 1204
PleI GAGTC 6 cut(s) 91, 374, 616, 1135, 1387, 1459
PluTI GGCGCC 1 cut(s) 252
PpsI GAGTC 6 cut(s) 91, 374, 616, 1135, 1387, 1459
PsiI TTATAA 1 cut(s) 1191
Psp6I CCWGG 4 cut(s) 39, 94, 207, 502
PspGI CCWGG 4 cut(s) 39, 94, 207, 502
PspN4I GGNNCC 5 cut(s) 24, 230, 250, 500, 1210
PspOMI GGGCCC 1 cut(s) 228
PspPI GGNCC 6 cut(s) 168, 175, 228, 229, 261, 1209
PstI CTGCAG 1 cut(s) 1207
PstNI CAGNNNCTG 2 cut(s) 932, 1202
PsuI RGATCY 3 cut(s) 498, 1088, 1118
PvuII CAGCTG 2 cut(s) 989, 1049
RsaI GTAC 3 cut(s) 104, 406, 1274
RsaNI GTAC 3 cut(s) 103, 405, 1273
RseI CAYNNNNRTG 1 cut(s) 1182
SapI GCTCTTC 1 cut(s) 129
SaqAI TTAA 4 cut(s) 651, 684, 1028, 1373
SatI GCNGC 9 cut(s) 120, 201, 264, 267, 397, 948, 959, 1050, 1203
Sau3AI GATC 8 cut(s) 63, 489, 498, 580, 976, 1088, 1118, 1227
Sau96I GGNCC 6 cut(s) 168, 175, 228, 229, 261, 1209
SchI GAGTC 6 cut(s) 92, 374, 616, 1136, 1388, 1460
ScrFI CCNGG 8 cut(s) 41, 61, 96, 209, 227, 401, 504, 1586
SduI GDGCHC 4 cut(s) 27, 147, 232, 1360
SfaNI GCATC 4 cut(s) 1259, 1377, 1428, 1516
SfcI CTRYAG 1 cut(s) 1203
SfoI GGCGCC 1 cut(s) 250
SinI GGWCC 3 cut(s) 168, 175, 1209
SmiMI CAYNNNNRTG 1 cut(s) 1182
Sse9I AATT 7 cut(s) 450, 906, 951, 1062, 1287, 1408, 1460
SsiI CCGC 6 cut(s) 119, 200, 264, 267, 801, 1558
SspDI GGCGCC 1 cut(s) 248
SspMI CTAG 5 cut(s) 347, 627, 911, 1403, 1416
StyD4I CCNGG 8 cut(s) 39, 59, 94, 207, 225, 399, 502, 1584
StyI CCWWGG 3 cut(s) 171, 737, 997
TaaI ACNGT 2 cut(s) 1272, 1483
TaiI ACGT 2 cut(s) 35, 237
TaqI TCGA 2 cut(s) 446, 1360
TasI AATT 7 cut(s) 450, 906, 951, 1062, 1287, 1408, 1460
TatI WGTACW 2 cut(s) 102, 1272
TauI GCSGC 4 cut(s) 122, 203, 266, 269
TfiI GAWTC 2 cut(s) 12, 1023
Tru1I TTAA 4 cut(s) 651, 684, 1028, 1373
Tru9I TTAA 4 cut(s) 651, 684, 1028, 1373
TscAI CASTG 2 cut(s) 583, 1275
TseFI GTSAC 1 cut(s) 218
TseI GCWGC 5 cut(s) 396, 947, 958, 1049, 1202
Tsp45I GTSAC 1 cut(s) 218
TspDTI ATGAA 4 cut(s) 17, 512, 1003, 1554
TspGWI ACGGA 1 cut(s) 554
TspRI CASTG 2 cut(s) 583, 1275
Van91I CCANNNNNTGG 2 cut(s) 896, 1160
VpaK11BI GGWCC 3 cut(s) 168, 175, 1209
XagI CCTNNNNNAGG 1 cut(s) 1419
XapI RAATTY 2 cut(s) 1287, 1408
XceI RCATGY 1 cut(s) 1181
XspI CTAG 5 cut(s) 347, 627, 911, 1403, 1416
Zsp2I ATGCAT 1 cut(s) 1252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.