pycom15g32900
ERF Family

Major Facilitator Superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0013955
Physical Location & Seq
Forward (+)
32204385 .. 32205995
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g32900.4

Sequence Viewer

Length: 1044 bp
ATGCATAACAGAGTGGCTATATCCAGAGCTTTGAATGGGATTGGCCTTGCTCTAGTTACTCCGTCTATCCAGTCCCTTGTAGCTGACTCAACTGATGACAACAACCGAGTCGTGGGAATCCCTGGGTGGAGAATTTCCTTTCACCTTGTTGGATTTATTAGTGTTGTAGTCGGTATTTTAGTCCGTCTGTACGCCACTGACCCACATTTTCCAGATTGTGAAACAAAAGATAGCAGCCAGAATTCTAGTAGTTCCTTGTGGTCACACGTGAAGGAACTGGCCCTAGAAGCTATGTCGGTTATTAAAATTCCTTCCTTTCAGATCGTTGTGGCGCAGGGTAAAATGCGAGATATCCTTTCCATGCGTCTTCCAAACGCAGGAAGGATTATATTAGCACAGATAAGCTCCACATCTGCCATCCCTCTTGCAGCAATTCTTTTGCTTGCATTACCTGTGGATCCATCTACGCTTGTCATCCATGGTTTCATCTTGTTCATCATGGGCTTCTTAATTTCATGGAATGCTCCAGCTACAAACAATCCGATTTTTGCAGAGATAGTTCCTGAGAGATCCCGAACAAATGTATATGCTTTGGACAGATCTTTCAAGTCCATACTTTCATCGTTCGTTCCTCCAGTAGTTGGGATATTGGCTCAACGCGTTTATGGTTATAAACCAGTTCCTCAAGGGTCCAGTGCATCTGAAGAGATTGCCACGGATAGGGGGAACGCTTTGTCATTGGCAAAAGCACTATATACAGCAATAGGAATTCCAATGGCTCTCTGTTGTGTCATTTACTCATTCCTATATTGCACCTACCCAAGAGACAGGGAGCGTGCACGGATGGAAGTTTTAATAGAATCAGAGATGCAACAAATAGAATTAGAAGATTCGCCTACCGGAGGAGAATATTCACGTGCTAGGTTTCCTGAATCAGAAGAGCTGTATGTGAATGATAGAACTGTAATTGAAGTAGAGTATGAAGGTGAGGACACTCTTGATGCTGATGCCAATGATGATGAACAGACACTGCTATACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0002165 GO:0003006 GO:0003376 GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0006897 GO:0006915 GO:0006928 GO:0006950 GO:0006996 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007399 GO:0007416 GO:0007417 GO:0007528 GO:0007610 GO:0007617 GO:0007618 GO:0007619 GO:0008150 GO:0008219 GO:0008333 GO:0008347 GO:0008582 GO:0009267 GO:0009605 GO:0009653 GO:0009791 GO:0009886 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010001 GO:0010008 GO:0010623 GO:0010646 GO:0010648 GO:0010876 GO:0010941 GO:0012501 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016477 GO:0019098 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031090 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033554 GO:0035193 GO:0036465 GO:0040007 GO:0040008 GO:0040011 GO:0042063 GO:0042594 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045476 GO:0045477 GO:0045595 GO:0045924 GO:0046624 GO:0046907 GO:0048468 GO:0048477 GO:0048488 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048609 GO:0048638 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0050808 GO:0050896 GO:0051124 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051716 GO:0051960 GO:0051963 GO:0060180 GO:0060284 GO:0065007 GO:0065008 GO:0071496 GO:0071702 GO:0071840 GO:0080171 GO:0090092 GO:0090097 GO:0090099 GO:0090101 GO:0090520 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0099003 GO:0099504 GO:1902742 GO:1904396 GO:1904748 GO:1905879 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 Sugar_tr

Protein Analysis

348

Amino Acids

38.19

Weight (kDa)

4.94

Isoelectric Point (pI)

45.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013955)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78130
fragaria_vesca FvH4_5g37680
malus_domestica MD08G1181400.v1.1
prunus_persica Prupe.1G514700_v2.0.a1 Prupe.1G514700_v2.0.a1
pyrus_communis pycom15g32900
rosa_chinensis RchiOBHm_Chr7g0239341
rosa_laevigata RLG00000000761
rosa_multiflora Rmu_sc0008456.1_g000005
rosa_roxburghii Rroxscaffold_3G00220990
rosa_rugosa Rorug07G0327600 Rorug07G0327700
rosa_samantha Rh7AG480900 Rh7BG453500 Rh7CG498800 Rh7DG466900
rosa_wichuraiana Rw7G040300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 672
AccB7I CCANNNNNTGG 1 cut(s) 641
AccII CGCG 1 cut(s) 660
AclWI GGATC 3 cut(s) 452, 465, 564
AcsI RAATTY 4 cut(s) 132, 241, 306, 768
AcuI CTGAAG 1 cut(s) 723
AcvI CACGTG 2 cut(s) 268, 917
AfaI GTAC 1 cut(s) 191
AfiI CCNNNNNNNGG 5 cut(s) 112, 377, 641, 720, 902
AflIII ACRYGT 2 cut(s) 265, 658
AgsI TTSAA 3 cut(s) 34, 607, 971
AjnI CCWGG 1 cut(s) 121
AluBI AGCT 6 cut(s) 29, 83, 290, 405, 530, 943
AluI AGCT 6 cut(s) 29, 83, 290, 405, 530, 943
Alw21I GWGCWC 1 cut(s) 841
Alw26I GTCTC 1 cut(s) 819
Alw44I GTGCAC 1 cut(s) 837
AlwI GGATC 3 cut(s) 452, 465, 564
AlwNI CAGNNNCTG 1 cut(s) 1030
AoxI GGCC 2 cut(s) 43, 279
ApaLI GTGCAC 1 cut(s) 837
ApeKI GCWGC 2 cut(s) 234, 428
ApoI RAATTY 4 cut(s) 132, 241, 306, 768
AspLEI GCGC 1 cut(s) 334
AspS9I GGNCC 2 cut(s) 280, 690
AsuHPI GGTGA 2 cut(s) 134, 998
AvaII GGWCC 1 cut(s) 690
BaeGI GKGCMC 1 cut(s) 841
BamHI GGATCC 1 cut(s) 457
BbrPI CACGTG 2 cut(s) 268, 917
BbsI GAAGAC 1 cut(s) 359
Bbv12I GWGCWC 1 cut(s) 841
BbvI GCAGC 2 cut(s) 246, 440
BccI CCATC 3 cut(s) 425, 469, 838
BciT130I CCWGG 1 cut(s) 123
BcoDI GTCTC 1 cut(s) 819
BfaI CTAG 5 cut(s) 53, 246, 284, 921, 1042
BglII AGATCT 1 cut(s) 599
BisI GCNGC 2 cut(s) 235, 429
BlsI GCNGC 2 cut(s) 236, 430
Bme1390I CCNGG 1 cut(s) 123
Bme18I GGWCC 1 cut(s) 690
BmgT120I GGNCC 2 cut(s) 280, 690
BmiI GGNNCC 2 cut(s) 459, 691
BmrFI CCNGG 1 cut(s) 123
BmsI GCATC 4 cut(s) 707, 858, 991, 997
BpiI GAAGAC 1 cut(s) 359
BpmI CTGGAG 2 cut(s) 510, 618
BpuEI CTTGAG 1 cut(s) 669
BsaAI YACGTR 2 cut(s) 268, 917
BsaJI CCNNGG 4 cut(s) 121, 122, 478, 714
BsaWI WCCGGW 1 cut(s) 899
Bsc4I CCNNNNNNNGG 5 cut(s) 112, 377, 641, 720, 902
Bse1I ACTGG 5 cut(s) 70, 282, 635, 677, 693
BseBI CCWGG 1 cut(s) 123
BseDI CCNNGG 4 cut(s) 121, 122, 478, 714
BseGI GGATG 3 cut(s) 417, 474, 849
BseLI CCNNNNNNNGG 5 cut(s) 112, 377, 641, 720, 902
BseMII CTCAG 1 cut(s) 555
BseNI ACTGG 5 cut(s) 70, 282, 635, 677, 693
BseRI GAGGAG 1 cut(s) 918
BseSI GKGCMC 1 cut(s) 841
BseXI GCAGC 2 cut(s) 246, 440
Bsh1236I CGCG 1 cut(s) 660
BshFI GGCC 2 cut(s) 45, 281
BsiHKAI GWGCWC 1 cut(s) 841
BsiSI CCGG 1 cut(s) 900
BslFI GGGAC 1 cut(s) 58
BslI CCNNNNNNNGG 5 cut(s) 112, 377, 641, 720, 902
BsmAI GTCTC 1 cut(s) 819
BsmFI GGGAC 1 cut(s) 58
BsmI GAATGC 1 cut(s) 526
BsnI GGCC 2 cut(s) 45, 281
Bsp1286I GDGCHC 1 cut(s) 841
Bsp143I GATC 4 cut(s) 321, 457, 569, 599
Bsp19I CCATGG 1 cut(s) 478
BspANI GGCC 2 cut(s) 45, 281
BspCNI CTCAG 1 cut(s) 556
BspFNI CGCG 1 cut(s) 660
BspLI GGNNCC 2 cut(s) 459, 691
BspPI GGATC 3 cut(s) 452, 465, 564
BspQI GCTCTTC 1 cut(s) 933
BsrI ACTGG 5 cut(s) 70, 282, 635, 677, 693
BssECI CCNNGG 4 cut(s) 121, 122, 478, 714
BssMI GATC 4 cut(s) 321, 457, 569, 599
BssT1I CCWWGG 1 cut(s) 478
Bst2UI CCWGG 1 cut(s) 123
Bst4CI ACNGT 1 cut(s) 964
Bst6I CTCTTC 2 cut(s) 699, 933
BstBAI YACGTR 2 cut(s) 268, 917
BstC8I GCNNGC 2 cut(s) 444, 837
BstDEI CTNAG 1 cut(s) 564
BstDSI CCRYGG 2 cut(s) 478, 714
BstENI CCTNNNNNAGG 1 cut(s) 900
BstF5I GGATG 3 cut(s) 417, 474, 849
BstFNI CGCG 1 cut(s) 660
BstHHI GCGC 1 cut(s) 334
BstKTI GATC 4 cut(s) 324, 460, 572, 602
BstMAI GTCTC 1 cut(s) 819
BstMBI GATC 4 cut(s) 321, 457, 569, 599
BstMWI GCNNNNNNNGC 1 cut(s) 287
BstNI CCWGG 1 cut(s) 123
BstSCI CCNGG 1 cut(s) 121
BstSLI GKGCMC 1 cut(s) 841
BstUI CGCG 1 cut(s) 660
BstV1I GCAGC 2 cut(s) 246, 440
BstV2I GAAGAC 1 cut(s) 359
BstX2I RGATCY 3 cut(s) 457, 569, 599
BstYI RGATCY 3 cut(s) 457, 569, 599
BsuRI GGCC 2 cut(s) 45, 281
BtgI CCRYGG 2 cut(s) 478, 714
BtsCI GGATG 3 cut(s) 417, 474, 849
BtsI GCAGTG 1 cut(s) 1028
BtsIMutI CAGTG 3 cut(s) 195, 700, 1028
Cac8I GCNNGC 2 cut(s) 444, 837
CaiI CAGNNNCTG 1 cut(s) 1030
CfoI GCGC 1 cut(s) 334
Cfr13I GGNCC 2 cut(s) 280, 690
CseI GACGC 1 cut(s) 353
Csp6I GTAC 1 cut(s) 190
CviAII CATG 4 cut(s) 361, 479, 499, 516
CviQI GTAC 1 cut(s) 190
DdeI CTNAG 1 cut(s) 564
DpnI GATC 4 cut(s) 323, 459, 571, 601
DpnII GATC 4 cut(s) 321, 457, 569, 599
Eam1104I CTCTTC 2 cut(s) 699, 933
EarI CTCTTC 2 cut(s) 699, 933
Eco130I CCWWGG 1 cut(s) 478
Eco32I GATATC 1 cut(s) 352
Eco47I GGWCC 1 cut(s) 690
Eco57I CTGAAG 1 cut(s) 723
Eco72I CACGTG 2 cut(s) 268, 917
EcoNI CCTNNNNNAGG 1 cut(s) 900
EcoRI GAATTC 2 cut(s) 241, 768
EcoRII CCWGG 1 cut(s) 121
EcoRV GATATC 1 cut(s) 352
EcoT14I CCWWGG 1 cut(s) 478
EcoT22I ATGCAT 1 cut(s) 6
ErhI CCWWGG 1 cut(s) 478
FaeI CATG 4 cut(s) 364, 482, 502, 519
FaqI GGGAC 1 cut(s) 58
FatI CATG 4 cut(s) 360, 478, 498, 515
Fnu4HI GCNGC 2 cut(s) 235, 429
FokI GGATG 3 cut(s) 404, 461, 856
Fsp4HI GCNGC 2 cut(s) 235, 429
FspBI CTAG 5 cut(s) 53, 246, 284, 921, 1042
GlaI GCGC 1 cut(s) 333
GluI GCNGC 2 cut(s) 235, 429
GsuI CTGGAG 2 cut(s) 510, 618
HaeIII GGCC 2 cut(s) 45, 281
HapII CCGG 1 cut(s) 900
HgaI GACGC 1 cut(s) 353
HhaI GCGC 1 cut(s) 334
Hin1II CATG 4 cut(s) 364, 482, 502, 519
Hin6I GCGC 1 cut(s) 332
HinP1I GCGC 1 cut(s) 332
HinfI GANTC 6 cut(s) 86, 108, 117, 860, 890, 932
HpaII CCGG 1 cut(s) 900
HphI GGTGA 2 cut(s) 134, 998
Hpy166II GTNNAC 1 cut(s) 839
Hpy188I TCNGA 5 cut(s) 321, 543, 703, 865, 937
Hpy188III TCNNGA 6 cut(s) 24, 212, 563, 573, 929, 998
Hpy8I GTNNAC 1 cut(s) 839
HpyAV CCTTC 4 cut(s) 265, 321, 375, 977
HpyCH4III ACNGT 1 cut(s) 964
HpyCH4IV ACGT 2 cut(s) 267, 916
HpyCH4V TGCA 8 cut(s) 4, 428, 446, 551, 698, 813, 839, 871
HpyF10VI GCNNNNNNNGC 1 cut(s) 287
HpyF3I CTNAG 1 cut(s) 564
HpySE526I ACGT 2 cut(s) 267, 916
Hsp92II CATG 4 cut(s) 364, 482, 502, 519
HspAI GCGC 1 cut(s) 332
Kzo9I GATC 4 cut(s) 321, 457, 569, 599
LguI GCTCTTC 1 cut(s) 933
LmnI GCTCC 3 cut(s) 410, 529, 832
Lsp1109I GCAGC 2 cut(s) 246, 440
LweI GCATC 4 cut(s) 707, 858, 991, 997
MaeI CTAG 5 cut(s) 53, 246, 284, 921, 1042
MaeII ACGT 2 cut(s) 267, 916
MaeIII GTNAC 2 cut(s) 55, 261
MalI GATC 4 cut(s) 323, 459, 571, 601
MboI GATC 4 cut(s) 321, 457, 569, 599
MboII GAAGA 4 cut(s) 359, 716, 899, 950
MflI RGATCY 3 cut(s) 457, 569, 599
MhlI GDGCHC 1 cut(s) 841
MluCI AATT 8 cut(s) 132, 241, 306, 432, 510, 768, 881, 966
MluI ACGCGT 1 cut(s) 658
MlyI GAGTC 2 cut(s) 80, 117
MmeI TCCRAC 1 cut(s) 130
MnlI CCTC 5 cut(s) 432, 642, 693, 896, 982
Mph1103I ATGCAT 1 cut(s) 6
MseI TTAA 3 cut(s) 303, 509, 854
MspI CCGG 1 cut(s) 900
MspR9I CCNGG 1 cut(s) 123
Mva1269I GAATGC 1 cut(s) 526
MvaI CCWGG 1 cut(s) 123
MvnI CGCG 1 cut(s) 660
MwoI GCNNNNNNNGC 1 cut(s) 287
NcoI CCATGG 1 cut(s) 478
NdeII GATC 4 cut(s) 321, 457, 569, 599
NlaIII CATG 4 cut(s) 364, 482, 502, 519
NlaIV GGNNCC 2 cut(s) 459, 691
NmuCI GTSAC 1 cut(s) 261
NsiI ATGCAT 1 cut(s) 6
PasI CCCWGGG 1 cut(s) 122
PciSI GCTCTTC 1 cut(s) 933
PctI GAATGC 1 cut(s) 526
PfeI GAWTC 4 cut(s) 117, 860, 890, 932
PflMI CCANNNNNTGG 1 cut(s) 641
PkrI GCNGC 2 cut(s) 236, 430
PleI GAGTC 2 cut(s) 80, 116
PmaCI CACGTG 2 cut(s) 268, 917
PmlI CACGTG 2 cut(s) 268, 917
PpsI GAGTC 2 cut(s) 80, 116
Ppu21I YACGTR 2 cut(s) 268, 917
PsiI TTATAA 1 cut(s) 672
Psp6I CCWGG 1 cut(s) 121
PspCI CACGTG 2 cut(s) 268, 917
PspGI CCWGG 1 cut(s) 121
PspN4I GGNNCC 2 cut(s) 459, 691
PspPI GGNCC 2 cut(s) 280, 690
PstNI CAGNNNCTG 1 cut(s) 1030
PsuI RGATCY 3 cut(s) 457, 569, 599
RsaI GTAC 1 cut(s) 191
RsaNI GTAC 1 cut(s) 190
SapI GCTCTTC 1 cut(s) 933
SaqAI TTAA 3 cut(s) 303, 509, 854
SatI GCNGC 2 cut(s) 235, 429
Sau3AI GATC 4 cut(s) 321, 457, 569, 599
Sau96I GGNCC 2 cut(s) 280, 690
SchI GAGTC 2 cut(s) 80, 117
ScrFI CCNGG 1 cut(s) 123
SduI GDGCHC 1 cut(s) 841
SfaNI GCATC 4 cut(s) 707, 858, 991, 997
SinI GGWCC 1 cut(s) 690
SmlI CTYRAG 1 cut(s) 684
SmoI CTYRAG 1 cut(s) 684
Sse9I AATT 8 cut(s) 132, 241, 306, 432, 510, 768, 881, 966
SspI AATATT 1 cut(s) 911
SspMI CTAG 5 cut(s) 53, 246, 284, 921, 1042
StyD4I CCNGG 1 cut(s) 121
StyI CCWWGG 1 cut(s) 478
TaaI ACNGT 1 cut(s) 964
TaiI ACGT 2 cut(s) 270, 919
TasI AATT 8 cut(s) 132, 241, 306, 432, 510, 768, 881, 966
TfiI GAWTC 4 cut(s) 117, 860, 890, 932
Tru1I TTAA 3 cut(s) 303, 509, 854
Tru9I TTAA 3 cut(s) 303, 509, 854
TscAI CASTG 3 cut(s) 202, 700, 1035
TseFI GTSAC 1 cut(s) 261
TseI GCWGC 2 cut(s) 234, 428
Tsp45I GTSAC 1 cut(s) 261
TspDTI ATGAA 6 cut(s) 475, 484, 504, 609, 996, 1035
TspGWI ACGGA 4 cut(s) 51, 173, 731, 856
TspRI CASTG 3 cut(s) 202, 700, 1035
Van91I CCANNNNNTGG 1 cut(s) 641
VneI GTGCAC 1 cut(s) 837
VpaK11BI GGWCC 1 cut(s) 690
XagI CCTNNNNNAGG 1 cut(s) 900
XapI RAATTY 4 cut(s) 132, 241, 306, 768
XspI CTAG 5 cut(s) 53, 246, 284, 921, 1042
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.