Rw7G040300
ERF Family

Major Facilitator Superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0013955
Physical Location & Seq
Reverse (-)
62415405 .. 62418166
2762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G040300.1

Sequence Viewer

Length: 1575 bp
ATGGAGCCGGAGACGTTGACCCTGGTGCTGGTCAACCTCGCCGGGATCATGGAGCGAGCCGACGAGTCGTTACTTCCTGGCGTGTACAAGGAGGTCGGTGCGGCTCTTCACACCGACCCGACTGGGCTCGGGTCGCTCACTCTTTTCCGGTCCATGGTCCAGTCCCTCTGTTACCCCATCGCGGCTTACCTGGCCGTGCGTCACAACCGGGCCCACGTCATCGCCCTCGGTGCCTTCCTCTGGGCCGCCGCCACTTTTCTCGTCGCGTTTTCCTCCACTTTCTATCAGGTGGCTATATCCAGAGCCTTGAATGGGATTGGCCTTGCTCTAGTTGCTCCTGCTATGCAGTCACTTGTGGCTGACTCAACTGATGATAGCAGCCGGGGTACGGCTTTTGGGTGGCTTCAGCTAACTGGCAACATTGGTTCGATAATTGGTGGCCTTTGCTCAATACTGATAGCTCCATTGACGATCATGGGGATCCCTGGTTGGAGGATTTCCTTTCATCTTGTTGGCCTGATTAGTGTTGTAGTAGGTATTTTAGTCCGTATATATGCCACTGATCCACATTTTCCAGAGGGTGCAACAAAAGAAAGCAGTCAGACTCCTAGTAAATCGTTTTTGGCAGAAGTTAAGGAGCTGGCTAAAGAAGCTAAGTCGGTTATTAAAATCCCTTCTTTCCAGATTGTTGTGGCACAGGGTGTTACTGGCTCGTTTCCTTGGTCAGCATTATCATTTGCGCCAATGTGGCTCGAACTTACTGGCTTTTCTCATGGGAAATCCGCTTTCCTCATTGCCTTGTTTGTGATTGGTAATTCTCTTGGGGGTCTCTTTGGAGGTAAAATGGGGGATATCTTATCGGTGCGTTTTCCAAATGCTGGAAGGATAATGCTAGCACAGATAAGCTCAGCGTCTGCAATACCTCTCGCAGCAATTCTGCTGCTTGTATTGCCTGATGATCCATCTACAGCTGTCATCCATGGTTTAGTTTTGTTCATCATGGGATTCTCAATATCTTGGAATGCTCCAGCTGCAAACAATCCAATTTTTGCTGAGATAGTTCCTGAGAGATCCCGAACAAATGTATATGCTCTGGACAGATCTTTTGAGTCCATACTCTCCTCATTTGCTCCTCCAGTAGTTGGGATTTTGGCGCAGCACGTTTACGGTTATAAACCAGTTACTGCAGGGGCCAGTGCATCTGAAGAGATTGCCACAGATAGAGGGAATGCATCATCTTTGGCAAAAGCACTGTACACAGCAATAGGAATTCCAATGGCTCTGTGTTGTGTTATCTACTCGTTCCTATATTGCACCTACCCAAGAGACAGGGAGCGTGCTCGAATGGAGTTTTTAATAGAATCAGAGATGCAACAAATAGAATTAGAAAATTCACCTAGAGGAGAAGAACATTCCCAGATGCAGTTCCTTGAGTCAGAAGAACTATTTGTGAATGATAGAACTGTCATTGATGTGGAGTACGAGGGTGAGAAAGACCTTGTTGGTGATGCTGAGGATGATGAACAGGAATTGCTGTACCGCCAGTTGACCTTCTCCAATATGAGCCGGGAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000323 GO:0002165 GO:0003006 GO:0003376 GO:0003674 GO:0005215 GO:0005319 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005770 GO:0005773 GO:0005774 GO:0006810 GO:0006869 GO:0006897 GO:0006915 GO:0006928 GO:0006950 GO:0006996 GO:0007033 GO:0007034 GO:0007040 GO:0007041 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0007276 GO:0007281 GO:0007292 GO:0007399 GO:0007416 GO:0007417 GO:0007528 GO:0007610 GO:0007617 GO:0007618 GO:0007619 GO:0008150 GO:0008219 GO:0008333 GO:0008347 GO:0008582 GO:0009267 GO:0009605 GO:0009653 GO:0009791 GO:0009886 GO:0009966 GO:0009968 GO:0009987 GO:0009991 GO:0010001 GO:0010008 GO:0010623 GO:0010646 GO:0010648 GO:0010876 GO:0010941 GO:0012501 GO:0012505 GO:0016020 GO:0016043 GO:0016192 GO:0016477 GO:0019098 GO:0019953 GO:0022008 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023057 GO:0030154 GO:0031090 GO:0031410 GO:0031667 GO:0031668 GO:0031669 GO:0031902 GO:0031982 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033554 GO:0035193 GO:0036465 GO:0040007 GO:0040008 GO:0040011 GO:0042063 GO:0042594 GO:0042981 GO:0043067 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044085 GO:0044087 GO:0044422 GO:0044424 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0045476 GO:0045477 GO:0045595 GO:0045924 GO:0046624 GO:0046907 GO:0048468 GO:0048477 GO:0048488 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0048589 GO:0048609 GO:0048638 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050789 GO:0050793 GO:0050794 GO:0050803 GO:0050807 GO:0050808 GO:0050896 GO:0051124 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051716 GO:0051960 GO:0051963 GO:0060180 GO:0060284 GO:0065007 GO:0065008 GO:0071496 GO:0071702 GO:0071840 GO:0080171 GO:0090092 GO:0090097 GO:0090099 GO:0090101 GO:0090520 GO:0097708 GO:0098588 GO:0098657 GO:0098805 GO:0098852 GO:0099003 GO:0099504 GO:1902742 GO:1904396 GO:1904748 GO:1905879 GO:2000026 GO:2000241
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MFS_1 Sugar_tr

Protein Analysis

524

Amino Acids

56.56

Weight (kDa)

4.99

Isoelectric Point (pI)

37.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MFS_1 PF07690 13 - 378 1e-40 Major Facilitator Superfamily
Sugar_tr PF00083 60 - 185 9.7e-07 Sugar (and other) transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013955)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G78130
fragaria_vesca FvH4_5g37680
malus_domestica MD08G1181400.v1.1
prunus_persica Prupe.1G514700_v2.0.a1 Prupe.1G514700_v2.0.a1
pyrus_communis pycom15g32900
rosa_chinensis RchiOBHm_Chr7g0239341
rosa_laevigata RLG00000000761
rosa_multiflora Rmu_sc0008456.1_g000005
rosa_roxburghii Rroxscaffold_3G00220990
rosa_rugosa Rorug07G0327600 Rorug07G0327700
rosa_samantha Rh7AG480900 Rh7BG453500 Rh7CG498800 Rh7DG466900
rosa_wichuraiana Rw7G040300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1173
AccB1I GGYRCC 1 cut(s) 230
AccB7I CCANNNNNTGG 2 cut(s) 878, 1142
AccII CGCG 2 cut(s) 182, 266
AciI CCGC 6 cut(s) 101, 182, 246, 249, 783, 1540
AclWI GGATC 6 cut(s) 53, 475, 488, 557, 953, 1065
AcoI YGGCCR 1 cut(s) 192
AcsI RAATTY 2 cut(s) 1269, 1390
AcuI CTGAAG 2 cut(s) 389, 1224
AdeI CACNNNGTG 1 cut(s) 701
AfaI GTAC 5 cut(s) 86, 388, 1256, 1481, 1538
AfiI CCNNNNNNNGG 8 cut(s) 28, 154, 181, 240, 312, 388, 878, 1142
AgsI TTSAA 1 cut(s) 310
AjiI CACGTC 1 cut(s) 217
AjnI CCWGG 4 cut(s) 21, 76, 189, 484
AluBI AGCT 7 cut(s) 409, 461, 640, 653, 906, 971, 1031
AluI AGCT 7 cut(s) 409, 461, 640, 653, 906, 971, 1031
Alw21I GWGCWC 1 cut(s) 1342
Alw26I GTCTC 3 cut(s) 5, 833, 1320
AlwI GGATC 6 cut(s) 53, 475, 488, 557, 953, 1065
AlwNI CAGNNNCTG 2 cut(s) 914, 1184
Ama87I CYCGRG 1 cut(s) 128
AoxI GGCC 7 cut(s) 192, 210, 243, 319, 439, 514, 1191
ApaI GGGCCC 1 cut(s) 214
ApeKI GCWGC 5 cut(s) 378, 929, 940, 1031, 1156
ApoI RAATTY 2 cut(s) 1269, 1390
ArsI GACNNNNNNTTYG 2 cut(s) 1088, 1120
AspLEI GCGC 2 cut(s) 742, 1156
AspS9I GGNCC 6 cut(s) 150, 157, 210, 211, 243, 1191
AsuC2I CCSGG 4 cut(s) 43, 209, 383, 1568
AsuHPI GGTGA 3 cut(s) 1386, 1499, 1517
AsuNHI GCTAGC 1 cut(s) 892
AvaI CYCGRG 1 cut(s) 128
AvaII GGWCC 2 cut(s) 150, 157
BaeGI GKGCMC 1 cut(s) 214
BamHI GGATCC 1 cut(s) 480
BanI GGYRCC 1 cut(s) 230
BanII GRGCYC 2 cut(s) 129, 214
Bbv12I GWGCWC 1 cut(s) 1342
BbvCI CCTCAGC 1 cut(s) 1512
BbvI GCAGC 5 cut(s) 390, 927, 941, 1018, 1168
BccI CCATC 2 cut(s) 185, 970
BceAI ACGGC 2 cut(s) 179, 405
BciT130I CCWGG 4 cut(s) 23, 78, 191, 486
BcnI CCSGG 4 cut(s) 43, 209, 383, 1568
BcoDI GTCTC 3 cut(s) 5, 833, 1320
BfaI CTAG 4 cut(s) 329, 609, 893, 1398
BfmI CTRYAG 2 cut(s) 966, 1185
BglI GCCNNNNNGGC 1 cut(s) 748
BglII AGATCT 1 cut(s) 1100
BisI GCNGC 9 cut(s) 102, 183, 246, 249, 379, 930, 941, 1032, 1157
BlpI GCTNAGC 1 cut(s) 907
BlsI GCNGC 9 cut(s) 103, 184, 247, 250, 380, 931, 942, 1033, 1158
Bme1390I CCNGG 8 cut(s) 23, 43, 78, 191, 209, 383, 486, 1568
Bme18I GGWCC 2 cut(s) 150, 157
BmeT110I CYCGRG 1 cut(s) 128
BmgBI CACGTC 1 cut(s) 217
BmgT120I GGNCC 6 cut(s) 150, 157, 210, 211, 243, 1191
BmiI GGNNCC 5 cut(s) 6, 212, 232, 482, 1192
BmrFI CCNGG 8 cut(s) 23, 43, 78, 191, 209, 383, 486, 1568
BmrI ACTGGG 1 cut(s) 132
BmsI GCATC 5 cut(s) 1208, 1241, 1359, 1410, 1498
BmtI GCTAGC 1 cut(s) 896
BmuI ACTGGG 1 cut(s) 132
BpmI CTGGAG 2 cut(s) 1011, 1119
Bpu10I CCTNAGC 1 cut(s) 1512
Bpu1102I GCTNAGC 1 cut(s) 907
BpuEI CTTGAG 1 cut(s) 1451
BpuMI CCSGG 4 cut(s) 43, 209, 383, 1568
BsaI GGTCTC 1 cut(s) 833
BsaJI CCNNGG 7 cut(s) 21, 153, 226, 382, 484, 719, 979
BsaWI WCCGGW 1 cut(s) 147
Bsc4I CCNNNNNNNGG 8 cut(s) 28, 154, 181, 240, 312, 388, 878, 1142
Bse1I ACTGG 9 cut(s) 127, 160, 418, 712, 766, 1136, 1178, 1194, 1543
Bse3DI GCAATG 1 cut(s) 792
BseBI CCWGG 4 cut(s) 23, 78, 191, 486
BseDI CCNNGG 7 cut(s) 21, 153, 226, 382, 484, 719, 979
BseGI GGATG 2 cut(s) 975, 1522
BseLI CCNNNNNNNGG 8 cut(s) 28, 154, 181, 240, 312, 388, 878, 1142
BseMI GCAATG 1 cut(s) 792
BseMII CTCAG 4 cut(s) 921, 1044, 1056, 1503
BseNI ACTGG 9 cut(s) 127, 160, 418, 712, 766, 1136, 1178, 1194, 1543
BseRI GAGGAG 3 cut(s) 1111, 1122, 1416
BseSI GKGCMC 1 cut(s) 214
BseXI GCAGC 5 cut(s) 390, 927, 941, 1018, 1168
Bsh1236I CGCG 2 cut(s) 182, 266
BshFI GGCC 7 cut(s) 194, 212, 245, 321, 441, 516, 1193
BshNI GGYRCC 1 cut(s) 230
BsiHKAI GWGCWC 1 cut(s) 1342
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 6 cut(s) 8, 42, 148, 208, 382, 1567
BslFI GGGAC 1 cut(s) 148
BslI CCNNNNNNNGG 8 cut(s) 28, 154, 181, 240, 312, 388, 878, 1142
BsmAI GTCTC 3 cut(s) 5, 833, 1320
BsmBI CGTCTC 1 cut(s) 5
BsmFI GGGAC 1 cut(s) 148
BsmI GAATGC 2 cut(s) 1027, 1234
BsnI GGCC 7 cut(s) 194, 212, 245, 321, 441, 516, 1193
Bso31I GGTCTC 1 cut(s) 833
BsoBI CYCGRG 1 cut(s) 128
Bsp120I GGGCCC 1 cut(s) 210
Bsp1286I GDGCHC 3 cut(s) 129, 214, 1342
Bsp1407I TGTACA 2 cut(s) 84, 1254
Bsp143I GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
Bsp1720I GCTNAGC 1 cut(s) 907
Bsp19I CCATGG 2 cut(s) 153, 979
BspACI CCGC 6 cut(s) 101, 182, 246, 249, 783, 1540
BspANI GGCC 7 cut(s) 194, 212, 245, 321, 441, 516, 1193
BspCNI CTCAG 4 cut(s) 920, 1045, 1057, 1504
BspFNI CGCG 2 cut(s) 182, 266
BspLI GGNNCC 5 cut(s) 6, 212, 232, 482, 1192
BspMAI CTGCAG 1 cut(s) 1189
BspOI GCTAGC 1 cut(s) 896
BspPI GGATC 6 cut(s) 53, 475, 488, 557, 953, 1065
BspQI GCTCTTC 1 cut(s) 111
BspT107I GGYRCC 1 cut(s) 230
BspTNI GGTCTC 1 cut(s) 833
BsrDI GCAATG 1 cut(s) 792
BsrGI TGTACA 2 cut(s) 84, 1254
BsrI ACTGG 9 cut(s) 127, 160, 418, 712, 766, 1136, 1178, 1194, 1543
BssECI CCNNGG 7 cut(s) 21, 153, 226, 382, 484, 719, 979
BssMI GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
BssT1I CCWWGG 3 cut(s) 153, 719, 979
Bst2UI CCWGG 4 cut(s) 23, 78, 191, 486
Bst4CI ACNGT 3 cut(s) 1169, 1254, 1465
Bst6I CTCTTC 2 cut(s) 111, 1200
BstAUI TGTACA 2 cut(s) 84, 1254
BstC8I GCNNGC 4 cut(s) 57, 642, 894, 1338
BstDEI CTNAG 5 cut(s) 654, 907, 1053, 1065, 1512
BstDSI CCRYGG 2 cut(s) 153, 979
BstF5I GGATG 2 cut(s) 975, 1522
BstFNI CGCG 2 cut(s) 182, 266
BstHHI GCGC 2 cut(s) 742, 1156
BstKTI GATC 7 cut(s) 48, 474, 483, 565, 961, 1073, 1103
BstMAI GTCTC 3 cut(s) 5, 833, 1320
BstMBI GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
BstMWI GCNNNNNNNGC 8 cut(s) 133, 191, 230, 332, 650, 748, 949, 1031
BstNI CCWGG 4 cut(s) 23, 78, 191, 486
BstSCI CCNGG 8 cut(s) 21, 41, 76, 189, 207, 381, 484, 1566
BstSFI CTRYAG 2 cut(s) 966, 1185
BstSLI GKGCMC 1 cut(s) 214
BstUI CGCG 2 cut(s) 182, 266
BstV1I GCAGC 5 cut(s) 390, 927, 941, 1018, 1168
BstX2I RGATCY 3 cut(s) 480, 1070, 1100
BstYI RGATCY 3 cut(s) 480, 1070, 1100
BsuRI GGCC 7 cut(s) 194, 212, 245, 321, 441, 516, 1193
BtgI CCRYGG 2 cut(s) 153, 979
BtgZI GCGATG 2 cut(s) 163, 205
BtrI CACGTC 1 cut(s) 217
BtsCI GGATG 2 cut(s) 975, 1522
BtsIMutI CAGTG 3 cut(s) 558, 1201, 1250
Cac8I GCNNGC 4 cut(s) 57, 642, 894, 1338
CaiI CAGNNNCTG 2 cut(s) 914, 1184
CfoI GCGC 2 cut(s) 742, 1156
Cfr13I GGNCC 6 cut(s) 150, 157, 210, 211, 243, 1191
CseI GACGC 2 cut(s) 188, 900
Csp6I GTAC 5 cut(s) 85, 387, 1255, 1480, 1537
CviAII CATG 6 cut(s) 49, 154, 475, 773, 980, 1000
CviQI GTAC 5 cut(s) 85, 387, 1255, 1480, 1537
DdeI CTNAG 5 cut(s) 654, 907, 1053, 1065, 1512
DpnI GATC 7 cut(s) 47, 473, 482, 564, 960, 1072, 1102
DpnII GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
DraIII CACNNNGTG 1 cut(s) 701
EaeI YGGCCR 1 cut(s) 192
Eam1104I CTCTTC 2 cut(s) 111, 1200
EarI CTCTTC 2 cut(s) 111, 1200
Eco130I CCWWGG 3 cut(s) 153, 719, 979
Eco24I GRGCYC 2 cut(s) 129, 214
Eco31I GGTCTC 1 cut(s) 833
Eco32I GATATC 1 cut(s) 853
Eco47I GGWCC 2 cut(s) 150, 157
Eco57I CTGAAG 2 cut(s) 389, 1224
Eco88I CYCGRG 1 cut(s) 128
EcoRI GAATTC 1 cut(s) 1269
EcoRII CCWGG 4 cut(s) 21, 76, 189, 484
EcoRV GATATC 1 cut(s) 853
EcoT14I CCWWGG 3 cut(s) 153, 719, 979
EcoT22I ATGCAT 1 cut(s) 1234
EcoT38I GRGCYC 2 cut(s) 129, 214
ErhI CCWWGG 3 cut(s) 153, 719, 979
Esp3I CGTCTC 1 cut(s) 5
FaeI CATG 6 cut(s) 52, 157, 478, 776, 983, 1003
FaqI GGGAC 1 cut(s) 148
FatI CATG 6 cut(s) 48, 153, 474, 772, 979, 999
Fnu4HI GCNGC 9 cut(s) 102, 183, 246, 249, 379, 930, 941, 1032, 1157
FokI GGATG 2 cut(s) 962, 1529
FriOI GRGCYC 2 cut(s) 129, 214
Fsp4HI GCNGC 9 cut(s) 102, 183, 246, 249, 379, 930, 941, 1032, 1157
FspBI CTAG 4 cut(s) 329, 609, 893, 1398
GlaI GCGC 2 cut(s) 741, 1155
GluI GCNGC 9 cut(s) 102, 183, 246, 249, 379, 930, 941, 1032, 1157
GsuI CTGGAG 2 cut(s) 1011, 1119
HaeIII GGCC 7 cut(s) 194, 212, 245, 321, 441, 516, 1193
HapII CCGG 6 cut(s) 8, 42, 148, 208, 382, 1567
HgaI GACGC 2 cut(s) 188, 900
HhaI GCGC 2 cut(s) 742, 1156
Hin1II CATG 6 cut(s) 52, 157, 478, 776, 983, 1003
Hin6I GCGC 2 cut(s) 740, 1154
HinP1I GCGC 2 cut(s) 740, 1154
HincII GTYRAC 3 cut(s) 18, 34, 1548
HindII GTYRAC 3 cut(s) 18, 34, 1548
HinfI GANTC 7 cut(s) 65, 362, 604, 1005, 1109, 1361, 1433
HpaII CCGG 6 cut(s) 8, 42, 148, 208, 382, 1567
HphI GGTGA 3 cut(s) 1386, 1499, 1517
Hpy166II GTNNAC 6 cut(s) 18, 34, 85, 1165, 1257, 1548
Hpy188I TCNGA 4 cut(s) 603, 1204, 1366, 1438
Hpy188III TCNNGA 6 cut(s) 300, 575, 682, 1064, 1074, 1094
Hpy8I GTNNAC 6 cut(s) 18, 34, 85, 1165, 1257, 1548
Hpy99I CGWCG 2 cut(s) 65, 266
HpyAV CCTTC 4 cut(s) 244, 684, 876, 1561
HpyCH4III ACNGT 3 cut(s) 1169, 1254, 1465
HpyCH4IV ACGT 3 cut(s) 14, 216, 1161
HpyF10VI GCNNNNNNNGC 8 cut(s) 133, 191, 230, 332, 650, 748, 949, 1031
HpyF3I CTNAG 5 cut(s) 654, 907, 1053, 1065, 1512
HpySE526I ACGT 3 cut(s) 14, 216, 1161
Hsp92II CATG 6 cut(s) 52, 157, 478, 776, 983, 1003
HspAI GCGC 2 cut(s) 740, 1154
Kzo9I GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
LguI GCTCTTC 1 cut(s) 111
LmnI GCTCC 8 cut(s) 4, 52, 340, 466, 637, 1030, 1135, 1333
Lsp1109I GCAGC 5 cut(s) 390, 927, 941, 1018, 1168
LweI GCATC 5 cut(s) 1208, 1241, 1359, 1410, 1498
MaeI CTAG 4 cut(s) 329, 609, 893, 1398
MaeII ACGT 3 cut(s) 14, 216, 1161
MaeIII GTNAC 6 cut(s) 69, 170, 200, 348, 703, 1180
MalI GATC 7 cut(s) 47, 473, 482, 564, 960, 1072, 1102
MboI GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
MboII GAAGA 4 cut(s) 98, 1217, 1418, 1451
MflI RGATCY 3 cut(s) 480, 1070, 1100
MhlI GDGCHC 3 cut(s) 129, 214, 1342
MluCI AATT 8 cut(s) 432, 814, 933, 1044, 1269, 1382, 1390, 1529
MlyI GAGTC 5 cut(s) 74, 356, 598, 1118, 1442
MmeI TCCRAC 1 cut(s) 470
Mph1103I ATGCAT 1 cut(s) 1234
MseI TTAA 3 cut(s) 633, 666, 1355
MslI CAYNNNNRTG 1 cut(s) 1472
MspA1I CMGCKG 2 cut(s) 971, 1031
MspI CCGG 6 cut(s) 8, 42, 148, 208, 382, 1567
MspR9I CCNGG 8 cut(s) 23, 43, 78, 191, 209, 383, 486, 1568
Mva1269I GAATGC 2 cut(s) 1027, 1234
MvaI CCWGG 4 cut(s) 23, 78, 191, 486
MvnI CGCG 2 cut(s) 182, 266
MwoI GCNNNNNNNGC 8 cut(s) 133, 191, 230, 332, 650, 748, 949, 1031
NciI CCSGG 4 cut(s) 43, 209, 383, 1568
NcoI CCATGG 2 cut(s) 153, 979
NdeII GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
NheI GCTAGC 1 cut(s) 892
NlaIII CATG 6 cut(s) 52, 157, 478, 776, 983, 1003
NlaIV GGNNCC 5 cut(s) 6, 212, 232, 482, 1192
NmuCI GTSAC 2 cut(s) 200, 348
NsiI ATGCAT 1 cut(s) 1234
PciSI GCTCTTC 1 cut(s) 111
PctI GAATGC 2 cut(s) 1027, 1234
PfeI GAWTC 2 cut(s) 1005, 1361
PflMI CCANNNNNTGG 2 cut(s) 878, 1142
PkrI GCNGC 9 cut(s) 103, 184, 247, 250, 380, 931, 942, 1033, 1158
PleI GAGTC 5 cut(s) 73, 356, 598, 1117, 1441
PpsI GAGTC 5 cut(s) 73, 356, 598, 1117, 1441
PsiI TTATAA 1 cut(s) 1173
Psp6I CCWGG 4 cut(s) 21, 76, 189, 484
PspGI CCWGG 4 cut(s) 21, 76, 189, 484
PspN4I GGNNCC 5 cut(s) 6, 212, 232, 482, 1192
PspOMI GGGCCC 1 cut(s) 210
PspPI GGNCC 6 cut(s) 150, 157, 210, 211, 243, 1191
PstI CTGCAG 1 cut(s) 1189
PstNI CAGNNNCTG 2 cut(s) 914, 1184
PsuI RGATCY 3 cut(s) 480, 1070, 1100
PvuII CAGCTG 2 cut(s) 971, 1031
RsaI GTAC 5 cut(s) 86, 388, 1256, 1481, 1538
RsaNI GTAC 5 cut(s) 85, 387, 1255, 1480, 1537
RseI CAYNNNNRTG 1 cut(s) 1472
SapI GCTCTTC 1 cut(s) 111
SaqAI TTAA 3 cut(s) 633, 666, 1355
SatI GCNGC 9 cut(s) 102, 183, 246, 249, 379, 930, 941, 1032, 1157
Sau3AI GATC 7 cut(s) 45, 471, 480, 562, 958, 1070, 1100
Sau96I GGNCC 6 cut(s) 150, 157, 210, 211, 243, 1191
SchI GAGTC 5 cut(s) 74, 356, 598, 1118, 1442
ScrFI CCNGG 8 cut(s) 23, 43, 78, 191, 209, 383, 486, 1568
SduI GDGCHC 3 cut(s) 129, 214, 1342
SfaNI GCATC 5 cut(s) 1208, 1241, 1359, 1410, 1498
SfcI CTRYAG 2 cut(s) 966, 1185
SinI GGWCC 2 cut(s) 150, 157
SmiMI CAYNNNNRTG 1 cut(s) 1472
SmlI CTYRAG 1 cut(s) 1430
SmoI CTYRAG 1 cut(s) 1430
Sse9I AATT 8 cut(s) 432, 814, 933, 1044, 1269, 1382, 1390, 1529
SsiI CCGC 6 cut(s) 101, 182, 246, 249, 783, 1540
SspMI CTAG 4 cut(s) 329, 609, 893, 1398
StyD4I CCNGG 8 cut(s) 21, 41, 76, 189, 207, 381, 484, 1566
StyI CCWWGG 3 cut(s) 153, 719, 979
TaaI ACNGT 3 cut(s) 1169, 1254, 1465
TaiI ACGT 3 cut(s) 17, 219, 1164
TaqI TCGA 3 cut(s) 428, 753, 1342
TasI AATT 8 cut(s) 432, 814, 933, 1044, 1269, 1382, 1390, 1529
TatI WGTACW 2 cut(s) 84, 1254
TauI GCSGC 4 cut(s) 104, 185, 248, 251
TfiI GAWTC 2 cut(s) 1005, 1361
Tru1I TTAA 3 cut(s) 633, 666, 1355
Tru9I TTAA 3 cut(s) 633, 666, 1355
TscAI CASTG 3 cut(s) 565, 1201, 1257
TseFI GTSAC 2 cut(s) 200, 348
TseI GCWGC 5 cut(s) 378, 929, 940, 1031, 1156
Tsp45I GTSAC 2 cut(s) 200, 348
TspDTI ATGAA 3 cut(s) 494, 985, 1536
TspGWI ACGGA 1 cut(s) 536
TspRI CASTG 3 cut(s) 565, 1201, 1257
Van91I CCANNNNNTGG 2 cut(s) 878, 1142
VpaK11BI GGWCC 2 cut(s) 150, 157
XapI RAATTY 2 cut(s) 1269, 1390
XspI CTAG 4 cut(s) 329, 609, 893, 1398
Zsp2I ATGCAT 1 cut(s) 1234
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.