Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr08

Orthogroup ID

OG0003418

Physical Location & Seq

Genomic Coordinates Reverse (-)

23015383 .. 23022190

Gene Structure 6808 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD08G1184700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2088 bp

ATGGTTAGACCTCTGCATCGAGGTCCGTCTGGGCCGCGGATGTCTGGCAGTAGCAATGATTTTTTTGACTCCCAAATGAAAGATAAAACAGATAAAGAAGATTTGGACAGAAGAGCTTCTTCGGATAACAATAGTTTTGCATTTAAATTTCCCATTCGAGTACTTTTTCCGGACAATTCTCCTTCCAAACATGGAAATACCGAAAATGGCTTTACATCTGATCCCTTCATGGCTGGTACTCCCAGAAGTCGGCACAAGTTAACACTGCTACTGTTGAAGTTAAGTTTAGTTTTGATTGTTATTCTAGCTCTTACTGGATCCTTTTGGTGGACACTCTCCATCTCAACAACTTCAAGAGGTCACATATACCATGGATACCGGCGACTCCAACAGCAACTTGTTTCTGACCTGTGGCATATTGGAGAGCTTTCTCTTGGTTCTTCAAGGTTGAGAGACTTGGAGTTTTGTCCTCAGGAGTACGAAAATAATGTTCCATGCTTCAATGTTTCGGAGAATCTTGCCTTAGGTCTTGCTGATGGCAACGAGTATGACCGGCATTGTGAGAATGGGATGAGGCAAAATTGTTTGGTTCTTCCACCTGTGAATTATAAGATTCCTCTTAGGTGGCCTACTGGTAGAGATGTCATCTGGGTGGGGAATGTGAAAATAACAGCGCAGGAGGTACTTTCTTCTGGAAGCTTGACGAAGAGGATGATGATGTTGGAAGAAGAGCAAATTTCATTCCGTTCAGCCTCCTTGATGTTTGATGGTGTTGAAGACTACTCGCACCAAATTGCAGAAATGATAGGACTGAGAAATGAATCCAATTTCATACACGCTGGGGTGAGAACCATCTTGGATATAGGATGTGGTTATGGTAGTTTCGGAGCACATCTCTTTTCCAGTCAGATCCTAACTATGTGCATTGCAAACTATGAGGCTTCAGGAAGCCAAGTTCAGATGACTCTTGAAAGGGGTCTTCCTGCAATGATTGGTTCTTTTATTTTGAAACAGTTGCCTTATCCATCTCTCTCTTTTGATATGTTGCACTGTGCACGATGTGGCATTGATTGGGACCAACAAGATGGGATCCTCTTGATTGAGGTTGATAGAGTTTTGAAACCTGGTGGATACTTTGTCTGGACATCACCTATTACCAATGCCGAGACATTTCGTCGTAACAAAGTGAATCAGAAAAGGTGGAACCTTGTACGTGATTTTGCAGAAAATCTCTGCTGGGAGATGTTATCGCAGCAAGATGAAACAGTTGTATGGAAAAAGACTAGTAAAAGGAATTGTTATAGTTCACGGAAACCAGGTTCAGGTCCCTCTATATGCAGCAAGGGTCATGATGTTGAATCTCCATATTATCGACCACTCAAAGCCTGTATTAGTGGAACTCAAAGCCGCAGATGGATACCTATTGAAGAGAGGAAAACCTGGCCTTCTAGGGCTAATCCGAACAAGAGTGAACTTGCCATATATGGATTACATCCCGAAGAACTTGCTGAGGATGCTGAGACATGGAAAATGGCAGTACGGAATTATTGGTCTCTTCTGTCACCATTGATATTCTCAGATCATCCAAAGAGACCTGGAGATGAAGATCCTTCACCGCCCTATAATATGCTTAGAAACGTACTAGACATGAATGCTCATTTTGGTGGTTTTAATTCTGCATTATTGGAAGCTGGAAAGTCCGCATGGGTCATGAATGTGGTCCCAACAAATGGACCCAATTATCTGCCCTTGATCCTAGACAGGGGATTTGTTGGTGTTCTGCATGATTGGTGTGAACCCTTTCCAACATACCCAAGAACTTATGATATGGTGCATGCAGCAGGACTTCTTTCCCTTGAAAGTGATCATCAGCGCAGATGTACCATTCTTGATCTATTCACAGAGATTGATCGATTACTTCGTCCAGAGGGTTGGGTGATATTCCACGACAAAGCTGCTCTCATCGAATCAGCGAGAGCTCTCACGACAGGGCTGAAATGGGAGGCACGCGTGGTGGAAATCGAAAGCAACAGCGATGAAAAGCTCCTCATCTGCCAAAAGTCTTTCTTCAAGAAGCAAGCAAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005975 GO:0005976 GO:0007275 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0009058 GO:0009059 GO:0009664 GO:0009719 GO:0009725 GO:0009735 GO:0009832 GO:0009987 GO:0010033 GO:0010289 GO:0010383 GO:0010393 GO:0010394 GO:0012505 GO:0016043 GO:0016051 GO:0016740 GO:0016741 GO:0017144 GO:0022622 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0032501 GO:0032502 GO:0033692 GO:0034637 GO:0034645 GO:0042221 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044038 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045229 GO:0045488 GO:0045489 GO:0048364 GO:0048367 GO:0048731 GO:0048856 GO:0050896 GO:0052325 GO:0052546 GO:0070589 GO:0070592 GO:0071554 GO:0071555 GO:0071669 GO:0071704 GO:0071840 GO:0097708 GO:0098791 GO:0099402 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

696

Amino Acids

78.98

Weight (kDa)

6.69

Isoelectric Point (pI)

50.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	163 - 687	4.7e-143	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	286 - 380	7.9e-06	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003418)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78240 AT1G78240
fragaria_vesca	FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070 FvH4_5g37070
malus_domestica	MD00G1010000.v1.1 MD08G1184700.v1.1
prunus_persica	Prupe.1G518800_v2.0.a1
pyrus_communis	pycom08g15840 pycom15g33280
rosa_chinensis	RchiOBHm_Chr7g0243891
rosa_laevigata	RLG00000000826
rosa_multiflora	Rmu_ssc0000352.1_g000007
rosa_roxburghii	Rroxscaffold_3G00221690
rosa_rugosa	Rorug07G0321800 Rorug07G0321900 Rorug07G0322000 Rorug07G0322100 Rorug07G0322200 Rorug07G0322300
rosa_samantha	Rh7AG476700 Rh7BG448000 Rh7CG495100
rosa_wichuraiana	Rw7G039780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	609
AccB7I	CCANNNNNTGG	1 cut(s)	1730
AccII	CGCG	2 cut(s)	37, 2010
AccIII	TCCGGA	1 cut(s)	169
AciI	CCGC	5 cut(s)	35, 37, 1408, 1616, 1701
AclWI	GGATC	8 cut(s)	215, 312, 325, 904, 1084, 1097, 1601, 1747
AcsI	RAATTY	2 cut(s)	146, 735
AcuI	CTGAAG	1 cut(s)	927
AdeI	CACNNNGTG	1 cut(s)	1061
AfaI	GTAC	8 cut(s)	162, 238, 479, 684, 1212, 1539, 1641, 1882
AfiI	CCNNNNNNNGG	5 cut(s)	249, 327, 1322, 1730, 1762
AflIII	ACRYGT	1 cut(s)	2008
AhdI	GACNNNNNGTC	1 cut(s)	1173
AhlI	ACTAGT	1 cut(s)	1283
AjnI	CCWGG	4 cut(s)	1123, 1315, 1439, 1594
AloI	GAACNNNNNNTCC	4 cut(s)	939, 971, 1303, 1335
AluBI	AGCT	8 cut(s)	116, 308, 427, 699, 1691, 1955, 1979, 2044
AluI	AGCT	8 cut(s)	116, 308, 427, 699, 1691, 1955, 1979, 2044
Alw21I	GWGCWC	3 cut(s)	892, 1057, 1981
Alw26I	GTCTC	5 cut(s)	447, 1160, 1514, 1557, 1585
Alw44I	GTGCAC	1 cut(s)	1053
AlwI	GGATC	8 cut(s)	215, 312, 325, 904, 1084, 1097, 1601, 1747
Aor13HI	TCCGGA	1 cut(s)	169
AoxI	GGCC	3 cut(s)	32, 626, 1442
ApaLI	GTGCAC	1 cut(s)	1053
ApeKI	GCWGC	4 cut(s)	1252, 1338, 1838, 1955
ApoI	RAATTY	2 cut(s)	146, 735
ArsI	GACNNNNNNTTYG	2 cut(s)	1751, 1783
Asp700I	GAANNNNTTC	2 cut(s)	115, 1800
AspLEI	GCGC	2 cut(s)	676, 1875
AspS9I	GGNCC	6 cut(s)	23, 32, 1075, 1325, 1720, 1733
AsuHPI	GGTGA	5 cut(s)	856, 1140, 1554, 1605, 1948
AvaII	GGWCC	5 cut(s)	23, 1075, 1325, 1720, 1733
AxyI	CCTNAGG	2 cut(s)	471, 523
BaeGI	GKGCMC	1 cut(s)	1057
BamHI	GGATCC	2 cut(s)	317, 1089
BanII	GRGCYC	1 cut(s)	1981
BbsI	GAAGAC	2 cut(s)	783, 971
Bbv12I	GWGCWC	3 cut(s)	892, 1057, 1981
BbvCI	CCTCAGC	1 cut(s)	1509
BbvI	GCAGC	4 cut(s)	1264, 1350, 1850, 1942
BccI	CCATC	7 cut(s)	347, 530, 761, 860, 1033, 1079, 1407
BcgI	CGANNNNNNTGC	4 cut(s)	1487, 1521, 1937, 1971
BciT130I	CCWGG	4 cut(s)	1125, 1317, 1441, 1596
BciVI	GTATCC	3 cut(s)	368, 1124, 1410
BclI	TGATCA	1 cut(s)	1864
BcoDI	GTCTC	5 cut(s)	447, 1160, 1514, 1557, 1585
BcuI	ACTAGT	1 cut(s)	1283
BfaI	CTAG	5 cut(s)	305, 1284, 1449, 1643, 1757
BfuI	GTATCC	3 cut(s)	368, 1124, 1410
BisI	GCNGC	6 cut(s)	35, 1253, 1339, 1408, 1839, 1956
BlsI	GCNGC	6 cut(s)	36, 1254, 1340, 1409, 1840, 1957
BmcAI	AGTACT	1 cut(s)	162
Bme1390I	CCNGG	4 cut(s)	1125, 1317, 1441, 1596
Bme18I	GGWCC	5 cut(s)	23, 1075, 1325, 1720, 1733
BmeRI	GACNNNNNGTC	1 cut(s)	1173
BmgT120I	GGNCC	6 cut(s)	23, 32, 1075, 1325, 1720, 1733
BmiI	GGNNCC	7 cut(s)	319, 1076, 1091, 1205, 1327, 1722, 1735
BmrFI	CCNGG	4 cut(s)	1125, 1317, 1441, 1596
BmsI	GCATC	2 cut(s)	25, 1504
BpiI	GAAGAC	2 cut(s)	783, 971
BplI	GAGNNNNNCTC	2 cut(s)	879, 911
BpmI	CTGGAG	1 cut(s)	1617
Bpu10I	CCTNAGC	1 cut(s)	1509
Bsa29I	ATCGAT	1 cut(s)	1912
BsaAI	YACGTR	1 cut(s)	1214
BsaBI	GATNNNNATC	1 cut(s)	1605
BsaI	GGTCTC	2 cut(s)	1557, 1585
BsaJI	CCNNGG	2 cut(s)	35, 370
BsaWI	WCCGGW	1 cut(s)	169
Bsc4I	CCNNNNNNNGG	5 cut(s)	249, 327, 1322, 1730, 1762
Bse118I	RCCGGY	2 cut(s)	378, 552
Bse1I	ACTGG	3 cut(s)	319, 637, 903
Bse21I	CCTNAGG	2 cut(s)	471, 523
Bse3DI	GCAATG	3 cut(s)	61, 924, 993
Bse8I	GATNNNNATC	1 cut(s)	1605
BseAI	TCCGGA	1 cut(s)	169
BseBI	CCWGG	4 cut(s)	1125, 1317, 1441, 1596
BseCI	ATCGAT	1 cut(s)	1912
BseDI	CCNNGG	2 cut(s)	35, 370
BseGI	GGATG	7 cut(s)	45, 576, 717, 872, 1492, 1519, 1582
BseJI	GATNNNNATC	1 cut(s)	1605
BseLI	CCNNNNNNNGG	5 cut(s)	249, 327, 1322, 1730, 1762
BseMI	GCAATG	3 cut(s)	61, 924, 993
BseMII	CTCAG	5 cut(s)	485, 803, 1500, 1509, 1590
BseNI	ACTGG	3 cut(s)	319, 637, 903
BseRI	GAGGAG	1 cut(s)	2036
BseSI	GKGCMC	1 cut(s)	1057
BseXI	GCAGC	4 cut(s)	1264, 1350, 1850, 1942
BseYI	CCCAGC	2 cut(s)	839, 1236
Bsh1236I	CGCG	2 cut(s)	37, 2010
BshFI	GGCC	3 cut(s)	34, 628, 1444
BshVI	ATCGAT	1 cut(s)	1912
BsiHKAI	GWGCWC	3 cut(s)	892, 1057, 1981
BsiSI	CCGG	3 cut(s)	170, 379, 553
BslFI	GGGAC	3 cut(s)	1088, 1311, 1706
BslI	CCNNNNNNNGG	5 cut(s)	249, 327, 1322, 1730, 1762
BsmAI	GTCTC	5 cut(s)	447, 1160, 1514, 1557, 1585
BsmFI	GGGAC	3 cut(s)	1088, 1311, 1706
BsmI	GAATGC	1 cut(s)	1657
BsnI	GGCC	3 cut(s)	34, 628, 1444
Bso31I	GGTCTC	2 cut(s)	1557, 1585
Bsp1286I	GDGCHC	3 cut(s)	892, 1057, 1981
Bsp13I	TCCGGA	1 cut(s)	169
Bsp19I	CCATGG	1 cut(s)	370
BspACI	CCGC	5 cut(s)	35, 37, 1408, 1616, 1701
BspANI	GGCC	3 cut(s)	34, 628, 1444
BspCNI	CTCAG	5 cut(s)	484, 804, 1501, 1510, 1589
BspDI	ATCGAT	1 cut(s)	1912
BspEI	TCCGGA	1 cut(s)	169
BspFNI	CGCG	2 cut(s)	37, 2010
BspHI	TCATGA	2 cut(s)	1348, 1710
BspLI	GGNNCC	7 cut(s)	319, 1076, 1091, 1205, 1327, 1722, 1735
BspPI	GGATC	8 cut(s)	215, 312, 325, 904, 1084, 1097, 1601, 1747
BspQI	GCTCTTC	2 cut(s)	106, 723
BspTNI	GGTCTC	2 cut(s)	1557, 1585
BsrDI	GCAATG	3 cut(s)	61, 924, 993
BsrFI	RCCGGY	2 cut(s)	378, 552
BsrI	ACTGG	3 cut(s)	319, 637, 903
BssAI	RCCGGY	2 cut(s)	378, 552
BssECI	CCNNGG	2 cut(s)	35, 370
BssT1I	CCWWGG	1 cut(s)	370
Bst2UI	CCWGG	4 cut(s)	1125, 1317, 1441, 1596
Bst4CI	ACNGT	4 cut(s)	273, 1014, 1052, 1267
Bst6I	CTCTTC	5 cut(s)	106, 701, 723, 1422, 1560
BstBAI	YACGTR	1 cut(s)	1214
BstC8I	GCNNGC	3 cut(s)	1836, 2008, 2079
BstDEI	CTNAG	8 cut(s)	471, 523, 620, 812, 1509, 1518, 1576, 1631
BstDSI	CCRYGG	2 cut(s)	35, 370
BstF5I	GGATG	7 cut(s)	45, 576, 717, 872, 1492, 1519, 1582
BstFNI	CGCG	2 cut(s)	37, 2010
BstHHI	GCGC	2 cut(s)	676, 1875
BstMAI	GTCTC	5 cut(s)	447, 1160, 1514, 1557, 1585
BstMWI	GCNNNNNNNGC	1 cut(s)	1514
BstNI	CCWGG	4 cut(s)	1125, 1317, 1441, 1596
BstNSI	RCATGY	1 cut(s)	1838
BstSCI	CCNGG	4 cut(s)	1123, 1315, 1439, 1594
BstSLI	GKGCMC	1 cut(s)	1057
BstUI	CGCG	2 cut(s)	37, 2010
BstV1I	GCAGC	4 cut(s)	1264, 1350, 1850, 1942
BstV2I	GAAGAC	2 cut(s)	783, 971
BstX2I	RGATCY	4 cut(s)	317, 909, 1089, 1606
BstXI	CCANNNNNNTGG	2 cut(s)	1085, 1932
BstYI	RGATCY	4 cut(s)	317, 909, 1089, 1606
Bsu15I	ATCGAT	1 cut(s)	1912
Bsu36I	CCTNAGG	2 cut(s)	471, 523
BsuI	GTATCC	3 cut(s)	368, 1124, 1410
BsuRI	GGCC	3 cut(s)	34, 628, 1444
BsuTUI	ATCGAT	1 cut(s)	1912
BtgI	CCRYGG	2 cut(s)	35, 370
BtgZI	GCGATG	1 cut(s)	2049
BtsCI	GGATG	7 cut(s)	45, 576, 717, 872, 1492, 1519, 1582
BtsI	GCAGTG	1 cut(s)	263
BtsIMutI	CAGTG	2 cut(s)	263, 1048
Cac8I	GCNNGC	3 cut(s)	1836, 2008, 2079
CciI	TCATGA	2 cut(s)	1348, 1710
CfoI	GCGC	2 cut(s)	676, 1875
Cfr10I	RCCGGY	2 cut(s)	378, 552
Cfr13I	GGNCC	6 cut(s)	23, 32, 1075, 1325, 1720, 1733
Cfr42I	CCGCGG	1 cut(s)	38
ClaI	ATCGAT	1 cut(s)	1912
CsiI	ACCWGGT	2 cut(s)	1123, 1315
Csp6I	GTAC	8 cut(s)	161, 237, 478, 683, 1211, 1538, 1640, 1881
CviQI	GTAC	8 cut(s)	161, 237, 478, 683, 1211, 1538, 1640, 1881
DdeI	CTNAG	8 cut(s)	471, 523, 620, 812, 1509, 1518, 1576, 1631
DraI	TTTAAA	1 cut(s)	145
DraIII	CACNNNGTG	1 cut(s)	1061
DriI	GACNNNNNGTC	1 cut(s)	1173
Eam1104I	CTCTTC	5 cut(s)	106, 701, 723, 1422, 1560
Eam1105I	GACNNNNNGTC	1 cut(s)	1173
EarI	CTCTTC	5 cut(s)	106, 701, 723, 1422, 1560
Ecl136II	GAGCTC	1 cut(s)	1979
Eco130I	CCWWGG	1 cut(s)	370
Eco24I	GRGCYC	1 cut(s)	1981
Eco31I	GGTCTC	2 cut(s)	1557, 1585
Eco47I	GGWCC	5 cut(s)	23, 1075, 1325, 1720, 1733
Eco53kI	GAGCTC	1 cut(s)	1979
Eco57I	CTGAAG	1 cut(s)	927
Eco81I	CCTNAGG	2 cut(s)	471, 523
EcoICRI	GAGCTC	1 cut(s)	1979
EcoO109I	RGGNCCY	1 cut(s)	1325
EcoRII	CCWGG	4 cut(s)	1123, 1315, 1439, 1594
EcoT14I	CCWWGG	1 cut(s)	370
EcoT38I	GRGCYC	1 cut(s)	1981
ErhI	CCWWGG	1 cut(s)	370
FalI	AAGNNNNNCTT	4 cut(s)	103, 135, 2051, 2083
FaqI	GGGAC	3 cut(s)	1088, 1311, 1706
FbaI	TGATCA	1 cut(s)	1864
Fnu4HI	GCNGC	6 cut(s)	35, 1253, 1339, 1408, 1839, 1956
FokI	GGATG	7 cut(s)	52, 583, 724, 879, 1479, 1526, 1569
FriOI	GRGCYC	1 cut(s)	1981
Fsp4HI	GCNGC	6 cut(s)	35, 1253, 1339, 1408, 1839, 1956
FspBI	CTAG	5 cut(s)	305, 1284, 1449, 1643, 1757
GlaI	GCGC	2 cut(s)	675, 1874
GluI	GCNGC	6 cut(s)	35, 1253, 1339, 1408, 1839, 1956
GsaI	CCCAGC	2 cut(s)	843, 1240
GsuI	CTGGAG	1 cut(s)	1617
HaeIII	GGCC	3 cut(s)	34, 628, 1444
HapII	CCGG	3 cut(s)	170, 379, 553
HhaI	GCGC	2 cut(s)	676, 1875
Hin6I	GCGC	2 cut(s)	674, 1873
HinP1I	GCGC	2 cut(s)	674, 1873
HincII	GTYRAC	1 cut(s)	261
HindII	GTYRAC	1 cut(s)	261
HindIII	AAGCTT	1 cut(s)	697
HinfI	GANTC	9 cut(s)	68, 384, 514, 613, 821, 964, 1189, 1358, 1967
HpaI	GTTAAC	1 cut(s)	261
HpaII	CCGG	3 cut(s)	170, 379, 553
HphI	GGTGA	5 cut(s)	856, 1140, 1554, 1605, 1948
Hpy166II	GTNNAC	6 cut(s)	261, 330, 1055, 1307, 1472, 1796
Hpy8I	GTNNAC	6 cut(s)	261, 330, 1055, 1307, 1472, 1796
Hpy99I	CGWCG	1 cut(s)	1179
HpyAV	CCTTC	4 cut(s)	192, 235, 1455, 1620
HpyCH4III	ACNGT	4 cut(s)	273, 1014, 1052, 1267
HpyCH4IV	ACGT	2 cut(s)	1213, 1638
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1514
HpyF3I	CTNAG	8 cut(s)	471, 523, 620, 812, 1509, 1518, 1576, 1631
HpySE526I	ACGT	2 cut(s)	1213, 1638
HspAI	GCGC	2 cut(s)	674, 1873
Kpn2I	TCCGGA	1 cut(s)	169
Ksp22I	TGATCA	1 cut(s)	1864
KspAI	GTTAAC	1 cut(s)	261
KspI	CCGCGG	1 cut(s)	38
LguI	GCTCTTC	2 cut(s)	106, 723
LmnI	GCTCC	2 cut(s)	887, 2049
Lsp1109I	GCAGC	4 cut(s)	1264, 1350, 1850, 1942
LweI	GCATC	2 cut(s)	25, 1504
MabI	ACCWGGT	2 cut(s)	1123, 1315
MaeI	CTAG	5 cut(s)	305, 1284, 1449, 1643, 1757
MaeII	ACGT	2 cut(s)	1213, 1638
MaeIII	GTNAC	3 cut(s)	359, 1178, 1560
MflI	RGATCY	4 cut(s)	317, 909, 1089, 1606
MhlI	GDGCHC	3 cut(s)	892, 1057, 1981
MluI	ACGCGT	1 cut(s)	2008
MlyI	GAGTC	3 cut(s)	62, 378, 958
MmeI	TCCRAC	3 cut(s)	412, 702, 1829
MroI	TCCGGA	1 cut(s)	169
MroXI	GAANNNNTTC	2 cut(s)	115, 1800
MseI	TTAA	4 cut(s)	144, 260, 281, 1671
MslI	CAYNNNNRTG	3 cut(s)	650, 1662, 1715
MspA1I	CMGCKG	1 cut(s)	37
MspI	CCGG	3 cut(s)	170, 379, 553
MspR9I	CCNGG	4 cut(s)	1125, 1317, 1441, 1596
Mva1269I	GAATGC	1 cut(s)	1657
MvaI	CCWGG	4 cut(s)	1125, 1317, 1441, 1596
MvnI	CGCG	2 cut(s)	37, 2010
MwoI	GCNNNNNNNGC	1 cut(s)	1514
NcoI	CCATGG	1 cut(s)	370
NlaIV	GGNNCC	7 cut(s)	319, 1076, 1091, 1205, 1327, 1722, 1735
NmeAIII	GCCGAG	1 cut(s)	1189
NmuCI	GTSAC	2 cut(s)	359, 1560
NspI	RCATGY	1 cut(s)	1838
PaeI	GCATGC	1 cut(s)	1838
PagI	TCATGA	2 cut(s)	1348, 1710
PciSI	GCTCTTC	2 cut(s)	106, 723
PcsI	WCGNNNNNNNCGW	1 cut(s)	1918
PctI	GAATGC	1 cut(s)	1657
PdmI	GAANNNNTTC	2 cut(s)	115, 1800
PfeI	GAWTC	6 cut(s)	514, 613, 821, 1189, 1358, 1967
PflMI	CCANNNNNTGG	1 cut(s)	1730
PkrI	GCNGC	6 cut(s)	36, 1254, 1340, 1409, 1840, 1957
PleI	GAGTC	3 cut(s)	62, 378, 958
PpsI	GAGTC	3 cut(s)	62, 378, 958
Ppu21I	YACGTR	1 cut(s)	1214
PpuMI	RGGWCCY	1 cut(s)	1325
PsiI	TTATAA	1 cut(s)	609
Psp124BI	GAGCTC	1 cut(s)	1981
Psp5II	RGGWCCY	1 cut(s)	1325
Psp6I	CCWGG	4 cut(s)	1123, 1315, 1439, 1594
PspFI	CCCAGC	2 cut(s)	839, 1236
PspGI	CCWGG	4 cut(s)	1123, 1315, 1439, 1594
PspN4I	GGNNCC	7 cut(s)	319, 1076, 1091, 1205, 1327, 1722, 1735
PspPI	GGNCC	6 cut(s)	23, 32, 1075, 1325, 1720, 1733
PspPPI	RGGWCCY	1 cut(s)	1325
PsuI	RGATCY	4 cut(s)	317, 909, 1089, 1606
RsaI	GTAC	8 cut(s)	162, 238, 479, 684, 1212, 1539, 1641, 1882
RsaNI	GTAC	8 cut(s)	161, 237, 478, 683, 1211, 1538, 1640, 1881
RseI	CAYNNNNRTG	3 cut(s)	650, 1662, 1715
SacI	GAGCTC	1 cut(s)	1981
SacII	CCGCGG	1 cut(s)	38
SapI	GCTCTTC	2 cut(s)	106, 723
SaqAI	TTAA	4 cut(s)	144, 260, 281, 1671
SatI	GCNGC	6 cut(s)	35, 1253, 1339, 1408, 1839, 1956
Sau96I	GGNCC	6 cut(s)	23, 32, 1075, 1325, 1720, 1733
ScaI	AGTACT	1 cut(s)	162
SchI	GAGTC	3 cut(s)	62, 378, 958
ScrFI	CCNGG	4 cut(s)	1125, 1317, 1441, 1596
SduI	GDGCHC	3 cut(s)	892, 1057, 1981
SexAI	ACCWGGT	2 cut(s)	1123, 1315
SfaNI	GCATC	2 cut(s)	25, 1504
Sfr303I	CCGCGG	1 cut(s)	38
SgrBI	CCGCGG	1 cut(s)	38
SinI	GGWCC	5 cut(s)	23, 1075, 1325, 1720, 1733
SmiI	ATTTAAAT	1 cut(s)	145
SmiMI	CAYNNNNRTG	3 cut(s)	650, 1662, 1715
SpeI	ACTAGT	1 cut(s)	1283
SphI	GCATGC	1 cut(s)	1838
SsiI	CCGC	5 cut(s)	35, 37, 1408, 1616, 1701
SspMI	CTAG	5 cut(s)	305, 1284, 1449, 1643, 1757
SstI	GAGCTC	1 cut(s)	1981
StyD4I	CCNGG	4 cut(s)	1123, 1315, 1439, 1594
StyI	CCWWGG	1 cut(s)	370
SwaI	ATTTAAAT	1 cut(s)	145
TaaI	ACNGT	4 cut(s)	273, 1014, 1052, 1267
TaiI	ACGT	2 cut(s)	1216, 1641
TaqI	TCGA	6 cut(s)	19, 157, 1372, 1912, 1965, 2022
TatI	WGTACW	1 cut(s)	160
TauI	GCSGC	2 cut(s)	37, 1410
TfiI	GAWTC	6 cut(s)	514, 613, 821, 1189, 1358, 1967
Tru1I	TTAA	4 cut(s)	144, 260, 281, 1671
Tru9I	TTAA	4 cut(s)	144, 260, 281, 1671
TscAI	CASTG	2 cut(s)	270, 1055
TseFI	GTSAC	2 cut(s)	359, 1560
TseI	GCWGC	4 cut(s)	1252, 1338, 1838, 1955
Tsp45I	GTSAC	2 cut(s)	359, 1560
TspGWI	ACGGA	4 cut(s)	15, 734, 1324, 1555
TspRI	CASTG	2 cut(s)	270, 1055
Van91I	CCANNNNNTGG	1 cut(s)	1730
VneI	GTGCAC	1 cut(s)	1053
VpaK11BI	GGWCC	5 cut(s)	23, 1075, 1325, 1720, 1733
XapI	RAATTY	2 cut(s)	146, 735
XceI	RCATGY	1 cut(s)	1838
XmnI	GAANNNNTTC	2 cut(s)	115, 1800
XspI	CTAG	5 cut(s)	305, 1284, 1449, 1643, 1757
ZrmI	AGTACT	1 cut(s)	162

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.