Rorug07G0321800

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
33100997 .. 33105467
4471 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0321800.1

Sequence Viewer

Length: 792 bp
ATGTCTAAGTCAAGGTTGGAGGGCAAGGTGGCTCTCATCACTGGTGCAGCTGGTGGCATTGGTGAGGAAGCAGCAAGACTTTTTGCAGCGAATGGAGCTTTTGTTGTCGTAGCTGATATTCAAGATGAATTGGGTCTTCAAGTTGTAGCCTCAATAGCCTCGGAAAGAGTCTCTTACTTCCACTGCGACGTCAGAGACGAAAACCAAGTTGAACAAACAGTAGGTTACGCATTGGAAAAATACGGTAGCCTAGACGTTTTGTTCAGCAATGCAGGCATTATGGGTCCAATGACCGGCATTTTAGACCTCGACATTCAAGGTTTCGACAACACAATGATCATAAATGTCCGTGGAGTTGCAGCGACAATCAAGCACGCCGCGCGTGCCATGGTTGCTAGAAAAATCCGAGGTTCAGTTATATGCACTACAAGCATTGCAAGTTCACTTGGAGGTACAGCTCCACATGCTTATACAACATCGAAACATGCCTTAATCGGGTTGGTGAGATCGGCTTGCAGTGAGCTTGGTGCTTATGGGATTCGAGTGAACTGCATTTCCCCATTTGGTGTTGCAACCCCTCTTTCGTGCAAGGCTTATAACTTGGAGCCGAAAGAGGTCGAAGCCAGTAGTAGTGCCATTGCAAACTTGAAGGGGACTGTGTTGAAGGCTAGGCATATCGCAGAGGCAGCTATGTTTCTTGCTTCAGATGAATCCGGTTACGTTAGCGGACACAACTTGGTTGTTGATGGAGGCTTCTCGGTGGTTGATCACAGTGTTCCACCCGCCAACTAA

Protein Analysis

263

Amino Acids

27.36

Weight (kDa)

5.97

Isoelectric Point (pI)

27.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
adh_short PF00106 9 - 195 2.2e-47 short chain dehydrogenase
KR PF08659 11 - 171 6.5e-08 KR domain
adh_short_C2 PF13561 15 - 253 5.9e-62 Enoyl-(Acyl carrier protein) reductase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 597
AatII GACGTC 1 cut(s) 192
AccII CGCG 2 cut(s) 380, 382
AciI CCGC 3 cut(s) 378, 726, 783
AcuI CTGAAG 1 cut(s) 687
AcyI GRCGYC 1 cut(s) 189
AfaI GTAC 1 cut(s) 454
AfiI CCNNNNNNNGG 2 cut(s) 293, 495
AgsI TTSAA 6 cut(s) 122, 140, 212, 317, 649, 664
AloI GAACNNNNNNTCC 2 cut(s) 539, 571
AluBI AGCT 6 cut(s) 50, 98, 113, 458, 523, 689
AluI AGCT 6 cut(s) 50, 98, 113, 458, 523, 689
Alw26I GTCTC 2 cut(s) 175, 189
ApeKI GCWGC 5 cut(s) 47, 71, 86, 359, 686
AspLEI GCGC 1 cut(s) 382
AspS9I GGNCC 1 cut(s) 284
AsuHPI GGTGA 2 cut(s) 74, 514
AvaII GGWCC 1 cut(s) 284
BbsI GAAGAC 1 cut(s) 128
BbvI GCAGC 5 cut(s) 59, 83, 98, 371, 698
BccI CCATC 1 cut(s) 740
BcgI CGANNNNNNTGC 2 cut(s) 531, 565
BclI TGATCA 2 cut(s) 336, 766
BcoDI GTCTC 2 cut(s) 175, 189
BfaI CTAG 3 cut(s) 251, 396, 669
BisI GCNGC 6 cut(s) 48, 72, 87, 360, 378, 687
BlsI GCNGC 6 cut(s) 49, 73, 88, 361, 379, 688
Bme18I GGWCC 1 cut(s) 284
BmgT120I GGNCC 1 cut(s) 284
BmiI GGNNCC 2 cut(s) 285, 606
BpiI GAAGAC 1 cut(s) 128
BsaHI GRCGYC 1 cut(s) 189
BsaJI CCNNGG 4 cut(s) 159, 349, 387, 406
BsaWI WCCGGW 1 cut(s) 713
BsaXI ACNNNNNCTCC 2 cut(s) 87, 117
Bsc4I CCNNNNNNNGG 2 cut(s) 293, 495
Bse118I RCCGGY 1 cut(s) 293
Bse1I ACTGG 2 cut(s) 46, 624
Bse3DI GCAATG 3 cut(s) 274, 432, 636
BseDI CCNNGG 4 cut(s) 159, 349, 387, 406
BseLI CCNNNNNNNGG 2 cut(s) 293, 495
BseMI GCAATG 3 cut(s) 274, 432, 636
BseNI ACTGG 2 cut(s) 46, 624
BseXI GCAGC 5 cut(s) 59, 83, 98, 371, 698
BsgI GTGCAG 1 cut(s) 66
Bsh1236I CGCG 2 cut(s) 380, 382
BsiSI CCGG 2 cut(s) 294, 714
BslFI GGGAC 1 cut(s) 667
BslI CCNNNNNNNGG 2 cut(s) 293, 495
BsmAI GTCTC 2 cut(s) 175, 189
BsmBI CGTCTC 1 cut(s) 189
BsmFI GGGAC 1 cut(s) 667
Bsp143I GATC 3 cut(s) 336, 506, 766
Bsp19I CCATGG 1 cut(s) 387
BspACI CCGC 3 cut(s) 378, 726, 783
BspFNI CGCG 2 cut(s) 380, 382
BspLI GGNNCC 2 cut(s) 285, 606
BsrDI GCAATG 3 cut(s) 274, 432, 636
BsrFI RCCGGY 1 cut(s) 293
BsrI ACTGG 2 cut(s) 46, 624
BssAI RCCGGY 1 cut(s) 293
BssECI CCNNGG 4 cut(s) 159, 349, 387, 406
BssMI GATC 3 cut(s) 336, 506, 766
BssNI GRCGYC 1 cut(s) 189
BssT1I CCWWGG 1 cut(s) 387
Bst4CI ACNGT 4 cut(s) 220, 245, 658, 773
BstACI GRCGYC 1 cut(s) 189
BstC8I GCNNGC 4 cut(s) 274, 375, 384, 514
BstDEI CTNAG 1 cut(s) 6
BstDSI CCRYGG 2 cut(s) 349, 387
BstFNI CGCG 2 cut(s) 380, 382
BstHHI GCGC 1 cut(s) 382
BstKTI GATC 3 cut(s) 339, 509, 769
BstMAI GTCTC 2 cut(s) 175, 189
BstMBI GATC 3 cut(s) 336, 506, 766
BstMWI GCNNNNNNNGC 9 cut(s) 95, 155, 273, 379, 383, 392, 429, 464, 686
BstNSI RCATGY 2 cut(s) 467, 488
BstUI CGCG 2 cut(s) 380, 382
BstV1I GCAGC 5 cut(s) 59, 83, 98, 371, 698
BstV2I GAAGAC 1 cut(s) 128
BtgI CCRYGG 2 cut(s) 349, 387
BtsI GCAGTG 2 cut(s) 181, 523
BtsIMutI CAGTG 4 cut(s) 39, 181, 523, 778
Cac8I GCNNGC 4 cut(s) 274, 375, 384, 514
CfoI GCGC 1 cut(s) 382
Cfr10I RCCGGY 1 cut(s) 293
Cfr13I GGNCC 1 cut(s) 284
Csp6I GTAC 1 cut(s) 453
CviAII CATG 3 cut(s) 388, 464, 485
CviQI GTAC 1 cut(s) 453
DdeI CTNAG 1 cut(s) 6
DpnI GATC 3 cut(s) 338, 508, 768
DpnII GATC 3 cut(s) 336, 506, 766
Eco130I CCWWGG 1 cut(s) 387
Eco47I GGWCC 1 cut(s) 284
Eco57I CTGAAG 1 cut(s) 687
EcoT14I CCWWGG 1 cut(s) 387
ErhI CCWWGG 1 cut(s) 387
Esp3I CGTCTC 1 cut(s) 189
FaeI CATG 3 cut(s) 391, 467, 488
FalI AAGNNNNNCTT 2 cut(s) 157, 189
FaqI GGGAC 1 cut(s) 667
FatI CATG 3 cut(s) 387, 463, 484
FauI CCCGC 1 cut(s) 790
FbaI TGATCA 2 cut(s) 336, 766
Fnu4HI GCNGC 6 cut(s) 48, 72, 87, 360, 378, 687
Fsp4HI GCNGC 6 cut(s) 48, 72, 87, 360, 378, 687
FspBI CTAG 3 cut(s) 251, 396, 669
GlaI GCGC 1 cut(s) 381
GluI GCNGC 6 cut(s) 48, 72, 87, 360, 378, 687
HapII CCGG 2 cut(s) 294, 714
HhaI GCGC 1 cut(s) 382
Hin1I GRCGYC 1 cut(s) 189
Hin1II CATG 3 cut(s) 391, 467, 488
Hin6I GCGC 1 cut(s) 380
HinP1I GCGC 1 cut(s) 380
HinfI GANTC 3 cut(s) 168, 538, 710
HpaII CCGG 2 cut(s) 294, 714
HphI GGTGA 2 cut(s) 74, 514
Hpy166II GTNNAC 2 cut(s) 443, 547
Hpy188I TCNGA 4 cut(s) 163, 194, 407, 706
Hpy188III TCNNGA 1 cut(s) 122
Hpy8I GTNNAC 2 cut(s) 443, 547
Hpy99I CGWCG 1 cut(s) 191
HpyAV CCTTC 2 cut(s) 643, 658
HpyCH4III ACNGT 4 cut(s) 220, 245, 658, 773
HpyCH4IV ACGT 3 cut(s) 189, 255, 720
HpyF10VI GCNNNNNNNGC 9 cut(s) 95, 155, 273, 379, 383, 392, 429, 464, 686
HpyF3I CTNAG 1 cut(s) 6
HpySE526I ACGT 3 cut(s) 189, 255, 720
Hsp92I GRCGYC 1 cut(s) 189
Hsp92II CATG 3 cut(s) 391, 467, 488
HspAI GCGC 1 cut(s) 380
Ksp22I TGATCA 2 cut(s) 336, 766
Kzo9I GATC 3 cut(s) 336, 506, 766
LmnI GCTCC 3 cut(s) 95, 463, 604
LpnPI CCDG 6 cut(s) 27, 36, 258, 307, 637, 727
Lsp1109I GCAGC 5 cut(s) 59, 83, 98, 371, 698
MaeI CTAG 3 cut(s) 251, 396, 669
MaeII ACGT 3 cut(s) 189, 255, 720
MaeIII GTNAC 2 cut(s) 224, 716
MalI GATC 3 cut(s) 338, 508, 768
MboI GATC 3 cut(s) 336, 506, 766
MboII GAAGA 1 cut(s) 128
MluCI AATT 1 cut(s) 128
MlyI GAGTC 1 cut(s) 177
MseI TTAA 1 cut(s) 491
MspA1I CMGCKG 1 cut(s) 50
MspI CCGG 2 cut(s) 294, 714
MvnI CGCG 2 cut(s) 380, 382
MwoI GCNNNNNNNGC 9 cut(s) 95, 155, 273, 379, 383, 392, 429, 464, 686
NcoI CCATGG 1 cut(s) 387
NdeII GATC 3 cut(s) 336, 506, 766
NlaIII CATG 3 cut(s) 391, 467, 488
NlaIV GGNNCC 2 cut(s) 285, 606
NspI RCATGY 2 cut(s) 467, 488
PcsI WCGNNNNNNNCGW 1 cut(s) 195
PfeI GAWTC 2 cut(s) 538, 710
PkrI GCNGC 6 cut(s) 49, 73, 88, 361, 379, 688
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
PsiI TTATAA 1 cut(s) 597
PspN4I GGNNCC 2 cut(s) 285, 606
PspPI GGNCC 1 cut(s) 284
PvuII CAGCTG 1 cut(s) 50
RsaI GTAC 1 cut(s) 454
RsaNI GTAC 1 cut(s) 453
SaqAI TTAA 1 cut(s) 491
SatI GCNGC 6 cut(s) 48, 72, 87, 360, 378, 687
Sau3AI GATC 3 cut(s) 336, 506, 766
Sau96I GGNCC 1 cut(s) 284
SchI GAGTC 1 cut(s) 177
SinI GGWCC 1 cut(s) 284
Sse9I AATT 1 cut(s) 128
SsiI CCGC 3 cut(s) 378, 726, 783
SspMI CTAG 3 cut(s) 251, 396, 669
StyI CCWWGG 1 cut(s) 387
TaaI ACNGT 4 cut(s) 220, 245, 658, 773
TaiI ACGT 3 cut(s) 192, 258, 723
TaqI TCGA 5 cut(s) 309, 324, 479, 541, 618
TasI AATT 1 cut(s) 128
TauI GCSGC 1 cut(s) 380
TfiI GAWTC 2 cut(s) 538, 710
Tru1I TTAA 1 cut(s) 491
Tru9I TTAA 1 cut(s) 491
TscAI CASTG 4 cut(s) 46, 188, 523, 778
TseI GCWGC 5 cut(s) 47, 71, 86, 359, 686
TspDTI ATGAA 2 cut(s) 141, 723
TspGWI ACGGA 1 cut(s) 338
TspRI CASTG 4 cut(s) 46, 188, 523, 778
VpaK11BI GGWCC 1 cut(s) 284
XceI RCATGY 2 cut(s) 467, 488
XspI CTAG 3 cut(s) 251, 396, 669
ZraI GACGTC 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.