Prupe.1G520300_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000553
Physical Location & Seq
Reverse (-)
42698403 .. 42700033
1631 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G520300.1

Sequence Viewer

Length: 1425 bp
ATGAGTTCAAATTGTTTGATAGAGAAGCCACATGCAGTTTGCATACCATACCCAGCTCAAGGCCACATTAACCCAATGCTGAAACTAGCCAAACTCCTCCACTATAAAGGTTTTCATATAACCTATGTGAACAGTGAGTTCAACCTCAAACGCCTCCTTAAATCCAGAGGTCCCAACTCTCTCGATGGCCTTCCCTCCTTTCGATTCGAGACCATCCCCGACGGCCTGCCTCCAACTGATGCCAATGCCACCCAAGACATACCATCCTTATGTGATTCCACTAGGAAACGCAGCTTGCCTTACTTCAGAGACCTTTTGTCCAAGCTTAACTCTTCGCCCGATTGCCCTCCTGTAAGTTGCATAGTTTCTGACGGTGCCATGGGCTTCACTCTTGATGCAGCCCAAGAATTTGGCCTTCCAGAAGTGCTTTTCTGGACAACCAGTGCTTGTGGCTTCTTGGCCTATGTACACTACCACCGCCTCATTGAAAAGGATGCCAGTTATTTGACAAACGGCTATTTGGAGACTGAGATAGATTGGATACCAGGTATGAGAGGCATCCGACTAAAGGACATCCCCAGCTTCATTAGAACCACAGACCCAGATGATATCATGCTGGATTTTTGGGTGCATGAAACAGAGCGAACTCGAAAAGCTTCTGCTGTCATCTTTAACACCTTCCATGACTTTGAACATGAAGTTTTAGATGCACTTTCGACTTTGCTACCACCTATTTACTCCATTGGACCCCTACATCTACAGATTAATCAGATCCCGGCAGATAGCGAGTTGAAGGAGATAAGATCAAACCTATGGACAGAGGAACCAGAGTGTCTAGAATGGCTTAACTCTAAAGAACCTAACTCTGTGGTTTATGTCAACTTTGGAAGCATCACAGTGATGACAGCAGAGCAGCTAATTGAGTTTGCTTGGGGACTTGCAAATAGCAACCAGACCTTCTTTTGGGTGATTAGGCCTGACCTTGTTGGTGGGGATTCAGCTGTGGTTCCACCGGAGTTTGTGGAAGAGACCAAAGAAAGGAGCCTGTTGGCAAATTGGTGCCCTCAAGAACAAGTCCTGAGCCATCCGGCTGTAGGAGGGTTCTTGACTCACAGCGGTTGGAACTCTACTATTGAAAGTGTGTGTGCTGGAGTGCCCATGATCTGCTGGCCCTTCTTCGCAGAGCAACAGACCAATTGTAGGTACAGTGAGAAAGAGTGGGGCATTGACATGGAGATAGAGAGTGATGTTAAAAGAAACCACGTAGAGGGGCTTGTGAGAAAATTAATGGAGGGAGACGAGGGCAAAGAGATGAGGAAGAAAGCCCTGGAATGGAAAAAGTTGGCAACAGAGGCCACCAGTCCTAATGGCTCATCTTTTGTGGGTTTGGACAAAATGGTTAACGAGGTGCTTCTATCTCCATGA

Protein Analysis

475

Amino Acids

53.45

Weight (kDa)

5.04

Isoelectric Point (pI)

46.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 374, 1059
AciI CCGC 2 cut(s) 478, 1116
AclWI GGATC 1 cut(s) 766
AcsI RAATTY 1 cut(s) 407
AcuI CTGAAG 1 cut(s) 289
AfaI GTAC 2 cut(s) 468, 1205
AfiI CCNNNNNNNGG 8 cut(s) 59, 568, 963, 1038, 1094, 1200, 1267, 1332
AgsI TTSAA 6 cut(s) 9, 142, 488, 692, 793, 1136
AhdI GACNNNNNGTC 1 cut(s) 316
AjnI CCWGG 2 cut(s) 544, 1326
AluBI AGCT 7 cut(s) 56, 294, 325, 582, 656, 916, 1001
AluI AGCT 7 cut(s) 56, 294, 325, 582, 656, 916, 1001
Alw26I GTCTC 5 cut(s) 203, 303, 518, 1022, 1290
AlwI GGATC 1 cut(s) 766
AoxI GGCC 8 cut(s) 61, 187, 223, 412, 459, 974, 1169, 1353
ApeKI GCWGC 3 cut(s) 291, 398, 913
ApoI RAATTY 1 cut(s) 407
AseI ATTAAT 2 cut(s) 765, 1286
Asp700I GAANNNNTTC 1 cut(s) 655
AspS9I GGNCC 3 cut(s) 170, 746, 1170
AsuC2I CCSGG 1 cut(s) 776
AsuHPI GGTGA 1 cut(s) 979
AvaII GGWCC 2 cut(s) 170, 746
BaeGI GKGCMC 2 cut(s) 1064, 1158
BanI GGYRCC 2 cut(s) 374, 1059
BbvI GCAGC 3 cut(s) 303, 410, 925
BccI CCATC 4 cut(s) 179, 221, 271, 1092
BceAI ACGGC 2 cut(s) 238, 529
BciT130I CCWGG 2 cut(s) 546, 1328
BciVI GTATCC 1 cut(s) 534
BcnI CCSGG 1 cut(s) 776
BcoDI GTCTC 5 cut(s) 203, 303, 518, 1022, 1290
BfaI CTAG 3 cut(s) 86, 282, 836
BfmI CTRYAG 2 cut(s) 758, 1092
BfuI GTATCC 1 cut(s) 534
BisI GCNGC 3 cut(s) 292, 399, 914
BlsI GCNGC 3 cut(s) 293, 400, 915
Bme1390I CCNGG 3 cut(s) 546, 776, 1328
Bme18I GGWCC 2 cut(s) 170, 746
BmeRI GACNNNNNGTC 1 cut(s) 316
BmgT120I GGNCC 3 cut(s) 170, 746, 1170
BmiI GGNNCC 7 cut(s) 172, 376, 748, 825, 1008, 1043, 1061
BmrFI CCNGG 3 cut(s) 546, 776, 1328
BmsI GCATC 6 cut(s) 229, 385, 484, 567, 697, 900
BpmI CTGGAG 1 cut(s) 1170
Bpu10I CCTNAGC 1 cut(s) 1079
BpuEI CTTGAG 2 cut(s) 42, 1050
BpuMI CCSGG 1 cut(s) 776
BsaAI YACGTR 1 cut(s) 1264
BsaI GGTCTC 3 cut(s) 203, 303, 1022
BsaJI CCNNGG 2 cut(s) 378, 1326
BsaWI WCCGGW 1 cut(s) 1012
Bsc4I CCNNNNNNNGG 8 cut(s) 59, 568, 963, 1038, 1094, 1200, 1267, 1332
Bse1I ACTGG 3 cut(s) 441, 498, 1359
BseBI CCWGG 2 cut(s) 546, 1328
BseDI CCNNGG 2 cut(s) 378, 1326
BseGI GGATG 6 cut(s) 213, 263, 499, 558, 573, 1084
BseLI CCNNNNNNNGG 8 cut(s) 59, 568, 963, 1038, 1094, 1200, 1267, 1332
BseMII CTCAG 2 cut(s) 519, 1070
BseNI ACTGG 3 cut(s) 441, 498, 1359
BseRI GAGGAG 1 cut(s) 86
BseSI GKGCMC 2 cut(s) 1064, 1158
BseXI GCAGC 3 cut(s) 303, 410, 925
BseYI CCCAGC 2 cut(s) 52, 578
BshFI GGCC 8 cut(s) 63, 189, 225, 414, 461, 976, 1171, 1355
BshNI GGYRCC 2 cut(s) 374, 1059
BsiSI CCGG 3 cut(s) 776, 1013, 1088
BslFI GGGAC 2 cut(s) 156, 948
BslI CCNNNNNNNGG 8 cut(s) 59, 568, 963, 1038, 1094, 1200, 1267, 1332
BsmAI GTCTC 5 cut(s) 203, 303, 518, 1022, 1290
BsmBI CGTCTC 1 cut(s) 1290
BsmFI GGGAC 2 cut(s) 156, 948
BsnI GGCC 8 cut(s) 63, 189, 225, 414, 461, 976, 1171, 1355
Bso31I GGTCTC 3 cut(s) 203, 303, 1022
Bsp1286I GDGCHC 2 cut(s) 1064, 1158
Bsp1407I TGTACA 1 cut(s) 466
Bsp143I GATC 3 cut(s) 771, 803, 1161
Bsp19I CCATGG 1 cut(s) 378
BspACI CCGC 2 cut(s) 478, 1116
BspANI GGCC 8 cut(s) 63, 189, 225, 414, 461, 976, 1171, 1355
BspCNI CTCAG 2 cut(s) 520, 1071
BspLI GGNNCC 7 cut(s) 172, 376, 748, 825, 1008, 1043, 1061
BspPI GGATC 1 cut(s) 766
BspT107I GGYRCC 2 cut(s) 374, 1059
BspTNI GGTCTC 3 cut(s) 203, 303, 1022
BsrGI TGTACA 1 cut(s) 466
BsrI ACTGG 3 cut(s) 441, 498, 1359
BssECI CCNNGG 2 cut(s) 378, 1326
BssMI GATC 3 cut(s) 771, 803, 1161
BssT1I CCWWGG 1 cut(s) 378
Bst2UI CCWGG 2 cut(s) 546, 1328
Bst4CI ACNGT 4 cut(s) 134, 374, 898, 1208
Bst6I CTCTTC 2 cut(s) 337, 1020
BstAUI TGTACA 1 cut(s) 466
BstBAI YACGTR 1 cut(s) 1264
BstC8I GCNNGC 3 cut(s) 227, 296, 1169
BstDEI CTNAG 2 cut(s) 528, 1079
BstDSI CCRYGG 1 cut(s) 378
BstF5I GGATG 6 cut(s) 213, 263, 499, 558, 573, 1084
BstKTI GATC 3 cut(s) 774, 806, 1164
BstMAI GTCTC 5 cut(s) 203, 303, 518, 1022, 1290
BstMBI GATC 3 cut(s) 771, 803, 1161
BstMWI GCNNNNNNNGC 1 cut(s) 1352
BstNI CCWGG 2 cut(s) 546, 1328
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 3 cut(s) 544, 774, 1326
BstSFI CTRYAG 2 cut(s) 758, 1092
BstSLI GKGCMC 2 cut(s) 1064, 1158
BstV1I GCAGC 3 cut(s) 303, 410, 925
BstX2I RGATCY 1 cut(s) 771
BstXI CCANNNNNNTGG 1 cut(s) 410
BstYI RGATCY 1 cut(s) 771
BsuI GTATCC 1 cut(s) 534
BsuRI GGCC 8 cut(s) 63, 189, 225, 414, 461, 976, 1171, 1355
BtgI CCRYGG 1 cut(s) 378
BtsCI GGATG 6 cut(s) 213, 263, 499, 558, 573, 1084
BtsIMutI CAGTG 4 cut(s) 139, 448, 903, 1213
Cac8I GCNNGC 3 cut(s) 227, 296, 1169
Cfr13I GGNCC 3 cut(s) 170, 746, 1170
CsiI ACCWGGT 1 cut(s) 544
Csp6I GTAC 2 cut(s) 467, 1204
CviAII CATG 9 cut(s) 32, 379, 613, 632, 683, 695, 1159, 1231, 1422
CviQI GTAC 2 cut(s) 467, 1204
DdeI CTNAG 2 cut(s) 528, 1079
DpnI GATC 3 cut(s) 773, 805, 1163
DpnII GATC 3 cut(s) 771, 803, 1161
DriI GACNNNNNGTC 1 cut(s) 316
Eam1104I CTCTTC 2 cut(s) 337, 1020
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 2 cut(s) 337, 1020
Eco130I CCWWGG 1 cut(s) 378
Eco147I AGGCCT 1 cut(s) 976
Eco31I GGTCTC 3 cut(s) 203, 303, 1022
Eco32I GATATC 1 cut(s) 610
Eco47I GGWCC 2 cut(s) 170, 746
Eco57I CTGAAG 1 cut(s) 289
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 2 cut(s) 544, 1326
EcoRV GATATC 1 cut(s) 610
EcoT14I CCWWGG 1 cut(s) 378
ErhI CCWWGG 1 cut(s) 378
Esp3I CGTCTC 1 cut(s) 1290
FaeI CATG 9 cut(s) 35, 382, 616, 635, 686, 698, 1162, 1234, 1425
FaqI GGGAC 2 cut(s) 156, 948
FatI CATG 9 cut(s) 31, 378, 612, 631, 682, 694, 1158, 1230, 1421
Fnu4HI GCNGC 3 cut(s) 292, 399, 914
FokI GGATG 6 cut(s) 200, 250, 506, 545, 560, 1071
Fsp4HI GCNGC 3 cut(s) 292, 399, 914
FspBI CTAG 3 cut(s) 86, 282, 836
GluI GCNGC 3 cut(s) 292, 399, 914
GsaI CCCAGC 2 cut(s) 56, 582
GsuI CTGGAG 1 cut(s) 1170
HaeIII GGCC 8 cut(s) 63, 189, 225, 414, 461, 976, 1171, 1355
HapII CCGG 3 cut(s) 776, 1013, 1088
Hin1II CATG 9 cut(s) 35, 382, 616, 635, 686, 698, 1162, 1234, 1425
HincII GTYRAC 2 cut(s) 880, 1402
HindII GTYRAC 2 cut(s) 880, 1402
HindIII AAGCTT 2 cut(s) 323, 654
HinfI GANTC 4 cut(s) 204, 275, 995, 1108
HpaI GTTAAC 1 cut(s) 1402
HpaII CCGG 3 cut(s) 776, 1013, 1088
HphI GGTGA 1 cut(s) 979
Hpy166II GTNNAC 4 cut(s) 130, 469, 880, 1402
Hpy188I TCNGA 4 cut(s) 308, 370, 563, 771
Hpy8I GTNNAC 4 cut(s) 130, 469, 880, 1402
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 6 cut(s) 200, 425, 688, 787, 967, 1183
HpyCH4III ACNGT 4 cut(s) 134, 374, 898, 1208
HpyCH4IV ACGT 1 cut(s) 1263
HpyCH4V TGCA 7 cut(s) 35, 42, 360, 398, 631, 710, 941
HpyF10VI GCNNNNNNNGC 1 cut(s) 1352
HpyF3I CTNAG 2 cut(s) 528, 1079
HpySE526I ACGT 1 cut(s) 1263
Hsp92II CATG 9 cut(s) 35, 382, 616, 635, 686, 698, 1162, 1234, 1425
KspAI GTTAAC 1 cut(s) 1402
Kzo9I GATC 3 cut(s) 771, 803, 1161
LmnI GCTCC 1 cut(s) 1041
Lsp1109I GCAGC 3 cut(s) 303, 410, 925
LweI GCATC 6 cut(s) 229, 385, 484, 567, 697, 900
MabI ACCWGGT 1 cut(s) 544
MaeI CTAG 3 cut(s) 86, 282, 836
MaeII ACGT 1 cut(s) 1263
MalI GATC 3 cut(s) 773, 805, 1163
MboI GATC 3 cut(s) 771, 803, 1161
MboII GAAGA 4 cut(s) 324, 1037, 1168, 1330
MfeI CAATTG 1 cut(s) 1195
MflI RGATCY 1 cut(s) 771
MhlI GDGCHC 2 cut(s) 1064, 1158
MluCI AATT 6 cut(s) 10, 407, 918, 1054, 1195, 1283
MlyI GAGTC 1 cut(s) 1102
MmeI TCCRAC 3 cut(s) 257, 586, 1100
MroXI GAANNNNTTC 1 cut(s) 655
MseI TTAA 9 cut(s) 69, 159, 327, 672, 765, 846, 1251, 1286, 1401
MslI CAYNNNNRTG 4 cut(s) 268, 896, 899, 1229
MspA1I CMGCKG 2 cut(s) 1001, 1116
MspI CCGG 3 cut(s) 776, 1013, 1088
MspR9I CCNGG 3 cut(s) 546, 776, 1328
MunI CAATTG 1 cut(s) 1195
MvaI CCWGG 2 cut(s) 546, 1328
MwoI GCNNNNNNNGC 1 cut(s) 1352
NciI CCSGG 1 cut(s) 776
NcoI CCATGG 1 cut(s) 378
NdeII GATC 3 cut(s) 771, 803, 1161
NlaIII CATG 9 cut(s) 35, 382, 616, 635, 686, 698, 1162, 1234, 1425
NlaIV GGNNCC 7 cut(s) 172, 376, 748, 825, 1008, 1043, 1061
NspI RCATGY 1 cut(s) 35
PceI AGGCCT 1 cut(s) 976
PdmI GAANNNNTTC 1 cut(s) 655
PfeI GAWTC 3 cut(s) 204, 275, 995
PkrI GCNGC 3 cut(s) 293, 400, 915
PleI GAGTC 1 cut(s) 1102
PpsI GAGTC 1 cut(s) 1102
Ppu21I YACGTR 1 cut(s) 1264
PpuMI RGGWCCY 1 cut(s) 170
PshBI ATTAAT 2 cut(s) 765, 1286
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 2 cut(s) 544, 1326
PspFI CCCAGC 2 cut(s) 52, 578
PspGI CCWGG 2 cut(s) 544, 1326
PspN4I GGNNCC 7 cut(s) 172, 376, 748, 825, 1008, 1043, 1061
PspPI GGNCC 3 cut(s) 170, 746, 1170
PspPPI RGGWCCY 1 cut(s) 170
PsuI RGATCY 1 cut(s) 771
PvuII CAGCTG 1 cut(s) 1001
RsaI GTAC 2 cut(s) 468, 1205
RsaNI GTAC 2 cut(s) 467, 1204
RseI CAYNNNNRTG 4 cut(s) 268, 896, 899, 1229
SaqAI TTAA 9 cut(s) 69, 159, 327, 672, 765, 846, 1251, 1286, 1401
SatI GCNGC 3 cut(s) 292, 399, 914
Sau3AI GATC 3 cut(s) 771, 803, 1161
Sau96I GGNCC 3 cut(s) 170, 746, 1170
SchI GAGTC 1 cut(s) 1102
ScrFI CCNGG 3 cut(s) 546, 776, 1328
SduI GDGCHC 2 cut(s) 1064, 1158
SexAI ACCWGGT 1 cut(s) 544
SfaNI GCATC 6 cut(s) 229, 385, 484, 567, 697, 900
SfcI CTRYAG 2 cut(s) 758, 1092
SinI GGWCC 2 cut(s) 170, 746
SmiMI CAYNNNNRTG 4 cut(s) 268, 896, 899, 1229
SmlI CTYRAG 2 cut(s) 57, 1065
SmoI CTYRAG 2 cut(s) 57, 1065
Sse9I AATT 6 cut(s) 10, 407, 918, 1054, 1195, 1283
SseBI AGGCCT 1 cut(s) 976
SsiI CCGC 2 cut(s) 478, 1116
SspMI CTAG 3 cut(s) 86, 282, 836
StuI AGGCCT 1 cut(s) 976
StyD4I CCNGG 3 cut(s) 544, 774, 1326
StyI CCWWGG 1 cut(s) 378
TaaI ACNGT 4 cut(s) 134, 374, 898, 1208
TaiI ACGT 1 cut(s) 1266
TaqI TCGA 5 cut(s) 183, 202, 207, 649, 716
TasI AATT 6 cut(s) 10, 407, 918, 1054, 1195, 1283
TatI WGTACW 1 cut(s) 466
TfiI GAWTC 3 cut(s) 204, 275, 995
Tru1I TTAA 9 cut(s) 69, 159, 327, 672, 765, 846, 1251, 1286, 1401
Tru9I TTAA 9 cut(s) 69, 159, 327, 672, 765, 846, 1251, 1286, 1401
TscAI CASTG 4 cut(s) 139, 448, 903, 1213
TseI GCWGC 3 cut(s) 291, 398, 913
TspDTI ATGAA 4 cut(s) 104, 574, 648, 711
TspRI CASTG 4 cut(s) 139, 448, 903, 1213
VpaK11BI GGWCC 2 cut(s) 170, 746
VspI ATTAAT 2 cut(s) 765, 1286
XapI RAATTY 1 cut(s) 407
XbaI TCTAGA 1 cut(s) 835
XceI RCATGY 1 cut(s) 35
XmnI GAANNNNTTC 1 cut(s) 655
XspI CTAG 3 cut(s) 86, 282, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.