Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000553

Physical Location & Seq

Genomic Coordinates Forward (+)

15596452 .. 15600419

Gene Structure 3968 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001435

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1464 bp

ATGGGTTCTAATGCTTTAATGGCAGAGACTAAGCCACATGCCGTATGCATCCCTTACCCAGCGCAGGGTCACATAAACCCTATGCTCAAGTTAGCCAAGCTCCTCCACCACAAGGGCTTCCACATCACTTTCGTCAATACCGAGTACAACCACAAGCGCCTCCTGAACTCCCGAGGTCCCAACGCCCTCGACGGCATCCCCTCTTTTCAGTTCAAGACCATCCCCGATGGGCTTCCTCCTACCGACTCGAATGCCACGCAGGACATACAGGCTCTGTGCAAGTCCACCAGGAAGTACTGCCTCCCGCACTTCAGGGAGCTTCTTGGGAAGCTAAACTCTGAGGCGGACTCACCGCCAGTGAGCTGCGTGGTTTCTGATGGTATCATGAGCTTCACTCTTGATGCGGCCGAGGAACTGAGGGTGCCGGCAGTGCTTTTCTGGACTACTAGTGCTTGCGGGTTCATGTGTTACATTCAGTATCAGCATCTTGTTGAGAAGGGTTACACTCCTCTTAGAGATGCCAGTTACTTGACAAACGGCTACTTGAACACTACAATAGACTGGATACCAGGCATGAAAGATATCCGTTTGAAGGATTTCCCAACCTTTATCAGAACTACAGACCCAAACGACAACATGATCGATTTCGTTCTTCACGAAACCGAACGAGCAGCTAAGAAAGCCTCCGCCATCATCTTGAACACATTTGATGACATAGAACACGACGTCCTCGAAGCACTCTCGACCCTCCTACCTCCAGTCTACTCCATCGGACCCTTAAACCTAGAAGTCAACCAAATCCCACTCGACAGTGAGTCGCAGACCTTTGGGTCGAATCTTTGGAAGGAAGAGACAGAGGGTTTGGAATGGCTGGATTCTAAAGAGCCCAAATCTGTCATCTATGTCAACTTCGGAAGCATCACAGTGATGACCCAAACTCAGCTGATCGAGTTCGCTTGGGGCCTCGCAAACAGCAAGAAGACGTTTCTCTGGGTTATCAGGCCTGACCTAGTTGGGGGAGCATCGGCTATGGTGCCGGCAGAGTTTGTAGAGGAGACGAGAGAAAGAAGTATGTTGATCAGTTGGTGTCCTCAGGACCAAGTCTTGAGCCACCCAGCGATCGGAGGGTTCTTAACTCACAGCGGGTGGAACTCAACTGTCGAGAGTGTCTGCGGTGGAGTGCCGATGATCTGTTGGCCTTTCTTCGCCGAGCAACAGACGAACTGCAGGTACTGTTGCAAAGATTGGGGAATAGGGATGGAGATTGAGGGTGATCCTAAGAGAGATTATATAGAAGAGCTTGTGAGGAAGTTGATGGAGGGAGAAGAAGGGAAAGAGATGAAGAAGAAAGCTCTAGAATGGAAGAGGTTGGCAATGGAGGCCGTCACTGGTCCTGAGGGTTCGTCTTTTGTGAACTTGGACAAGATGGTCAACCAGGTTCTTCTAGCTCCCAGAAAATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0015020 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0050403 GO:0050502 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

488

Amino Acids

54.71

Weight (kDa)

5.35

Isoelectric Point (pI)

38.47

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_N	PF26168	15 - 141	1.5e-07	Glycosyltransferase, N-terminal domain
UDPGT	PF00201	289 - 420	6.1e-25	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000553)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca	FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica	MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica	Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis	pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis	RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata	RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora	Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii	Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa	Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha	Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana	Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	829, 1427
AatII	GACGTC	1 cut(s)	729
Acc36I	ACCTGC	1 cut(s)	1218
AccB1I	GGYRCC	2 cut(s)	421, 1033
AccI	GTMKAC	1 cut(s)	762
AciI	CCGC	8 cut(s)	305, 344, 353, 404, 456, 687, 1143, 1173
AclWI	GGATC	1 cut(s)	1268
AcoI	YGGCCR	1 cut(s)	405
AcuI	CTGAAG	1 cut(s)	295
AcyI	GRCGYC	1 cut(s)	726
AfaI	GTAC	3 cut(s)	146, 296, 1232
AfiI	CCNNNNNNNGG	6 cut(s)	64, 65, 112, 592, 1015, 1121
AgsI	TTSAA	4 cut(s)	214, 547, 592, 700
AhdI	GACNNNNNGTC	1 cut(s)	814
AhlI	ACTAGT	1 cut(s)	446
AjnI	CCWGG	3 cut(s)	287, 568, 1434
AloI	GAACNNNNNNTCC	2 cut(s)	711, 743
Alw26I	GTCTC	3 cut(s)	20, 845, 1049
AlwI	GGATC	1 cut(s)	1268
AlwNI	CAGNNNCTG	2 cut(s)	274, 1233
Ama87I	CYCGRG	1 cut(s)	171
AoxI	GGCC	5 cut(s)	405, 961, 1001, 1196, 1380
ApeKI	GCWGC	2 cut(s)	363, 671
ArsI	GACNNNNNNTTYG	2 cut(s)	844, 876
Asp700I	GAANNNNTTC	1 cut(s)	596
AspLEI	GCGC	2 cut(s)	64, 159
AspS9I	GGNCC	5 cut(s)	176, 773, 961, 1096, 1391
AsuHPI	GGTGA	2 cut(s)	342, 1283
AvaI	CYCGRG	1 cut(s)	171
AvaII	GGWCC	4 cut(s)	176, 773, 1096, 1391
AxyI	CCTNAGG	2 cut(s)	1092, 1395
BanI	GGYRCC	2 cut(s)	421, 1033
BanII	GRGCYC	1 cut(s)	888
BbsI	GAAGAC	1 cut(s)	986
BbvI	GCAGC	2 cut(s)	350, 683
BccI	CCATC	8 cut(s)	221, 227, 371, 698, 776, 1252, 1309, 1420
BceAI	ACGGC	4 cut(s)	26, 208, 553, 1367
BcgI	CGANNNNNNTGC	2 cut(s)	233, 267
BciT130I	CCWGG	3 cut(s)	289, 570, 1436
BciVI	GTATCC	1 cut(s)	558
BclI	TGATCA	1 cut(s)	1077
BcoDI	GTCTC	3 cut(s)	20, 845, 1049
BcuI	ACTAGT	1 cut(s)	446
BfaI	CTAG	5 cut(s)	447, 785, 1010, 1355, 1445
BfmI	CTRYAG	2 cut(s)	618, 1225
BfoI	RGCGCY	1 cut(s)	160
BfuAI	ACCTGC	1 cut(s)	1218
BfuI	GTATCC	1 cut(s)	558
BisI	GCNGC	3 cut(s)	364, 405, 672
BlsI	GCNGC	3 cut(s)	365, 406, 673
BmcAI	AGTACT	1 cut(s)	296
Bme1390I	CCNGG	3 cut(s)	289, 570, 1436
Bme18I	GGWCC	4 cut(s)	176, 773, 1096, 1391
BmeRI	GACNNNNNGTC	1 cut(s)	814
BmeT110I	CYCGRG	1 cut(s)	171
BmgT120I	GGNCC	5 cut(s)	176, 773, 961, 1096, 1391
BmiI	GGNNCC	5 cut(s)	178, 423, 775, 962, 1035
BmrFI	CCNGG	3 cut(s)	289, 570, 1436
BmsI	GCATC	7 cut(s)	57, 204, 391, 493, 508, 927, 1031
BpiI	GAAGAC	1 cut(s)	986
BplI	GAGNNNNNCTC	4 cut(s)	332, 364, 379, 411
BpmI	CTGGAG	1 cut(s)	741
BpuEI	CTTGAG	2 cut(s)	71, 1126
Bsa29I	ATCGAT	1 cut(s)	642
BsaHI	GRCGYC	1 cut(s)	726
BsaJI	CCNNGG	2 cut(s)	172, 408
Bsc4I	CCNNNNNNNGG	6 cut(s)	64, 65, 112, 592, 1015, 1121
Bse118I	RCCGGY	2 cut(s)	424, 1036
Bse1I	ACTGG	5 cut(s)	356, 522, 566, 758, 1393
Bse21I	CCTNAGG	2 cut(s)	1092, 1395
Bse3DI	GCAATG	1 cut(s)	1380
BseBI	CCWGG	3 cut(s)	289, 570, 1436
BseCI	ATCGAT	1 cut(s)	642
BseDI	CCNNGG	2 cut(s)	172, 408
BseGI	GGATG	4 cut(s)	48, 195, 219, 1263
BseLI	CCNNNNNNNGG	6 cut(s)	64, 65, 112, 592, 1015, 1121
BseMI	GCAATG	1 cut(s)	1380
BseMII	CTCAG	5 cut(s)	330, 407, 953, 1106, 1386
BseNI	ACTGG	5 cut(s)	356, 522, 566, 758, 1393
BseRI	GAGGAG	3 cut(s)	92, 498, 1067
BseX3I	CGGCCG	1 cut(s)	405
BseXI	GCAGC	2 cut(s)	350, 683
BseYI	CCCAGC	2 cut(s)	58, 1114
Bsh1285I	CGRYCG	2 cut(s)	408, 1122
BshFI	GGCC	5 cut(s)	407, 963, 1003, 1198, 1382
BshNI	GGYRCC	2 cut(s)	421, 1033
BshVI	ATCGAT	1 cut(s)	642
BsiEI	CGRYCG	2 cut(s)	408, 1122
BsiHKCI	CYCGRG	1 cut(s)	171
BsiSI	CCGG	2 cut(s)	425, 1037
BslFI	GGGAC	1 cut(s)	162
BslI	CCNNNNNNNGG	6 cut(s)	64, 65, 112, 592, 1015, 1121
BsmAI	GTCTC	3 cut(s)	20, 845, 1049
BsmBI	CGTCTC	1 cut(s)	1049
BsmFI	GGGAC	1 cut(s)	162
BsmI	GAATGC	1 cut(s)	256
BsnI	GGCC	5 cut(s)	407, 963, 1003, 1198, 1382
BsoBI	CYCGRG	1 cut(s)	171
Bsp1286I	GDGCHC	1 cut(s)	888
Bsp143I	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
BspACI	CCGC	8 cut(s)	305, 344, 353, 404, 456, 687, 1143, 1173
BspANI	GGCC	5 cut(s)	407, 963, 1003, 1198, 1382
BspCNI	CTCAG	5 cut(s)	331, 408, 952, 1105, 1387
BspDI	ATCGAT	1 cut(s)	642
BspHI	TCATGA	1 cut(s)	384
BspLI	GGNNCC	5 cut(s)	178, 423, 775, 962, 1035
BspMAI	CTGCAG	1 cut(s)	1229
BspMI	ACCTGC	1 cut(s)	1218
BspPI	GGATC	1 cut(s)	1268
BspQI	GCTCTTC	1 cut(s)	1290
BspT107I	GGYRCC	2 cut(s)	421, 1033
BsrDI	GCAATG	1 cut(s)	1380
BsrFI	RCCGGY	2 cut(s)	424, 1036
BsrI	ACTGG	5 cut(s)	356, 522, 566, 758, 1393
BssAI	RCCGGY	2 cut(s)	424, 1036
BssECI	CCNNGG	2 cut(s)	172, 408
BssMI	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
BssNI	GRCGYC	1 cut(s)	726
Bst2UI	CCWGG	3 cut(s)	289, 570, 1436
Bst4CI	ACNGT	4 cut(s)	812, 925, 1159, 1235
Bst6I	CTCTTC	3 cut(s)	843, 1290, 1358
BstACI	GRCGYC	1 cut(s)	726
BstC8I	GCNNGC	3 cut(s)	426, 454, 1038
BstDEI	CTNAG	9 cut(s)	30, 339, 416, 512, 675, 939, 1092, 1278, 1395
BstF5I	GGATG	4 cut(s)	48, 195, 219, 1263
BstH2I	RGCGCY	1 cut(s)	160
BstHHI	GCGC	2 cut(s)	64, 159
BstKTI	GATC	6 cut(s)	642, 948, 1080, 1122, 1191, 1276
BstMAI	GTCTC	3 cut(s)	20, 845, 1049
BstMBI	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
BstMCI	CGRYCG	2 cut(s)	408, 1122
BstMWI	GCNNNNNNNGC	4 cut(s)	20, 430, 680, 1379
BstNI	CCWGG	3 cut(s)	289, 570, 1436
BstNSI	RCATGY	1 cut(s)	41
BstSCI	CCNGG	3 cut(s)	287, 568, 1434
BstSFI	CTRYAG	2 cut(s)	618, 1225
BstV1I	GCAGC	2 cut(s)	350, 683
BstV2I	GAAGAC	1 cut(s)	986
BstZI	CGGCCG	1 cut(s)	405
Bsu15I	ATCGAT	1 cut(s)	642
Bsu36I	CCTNAGG	2 cut(s)	1092, 1395
BsuI	GTATCC	1 cut(s)	558
BsuRI	GGCC	5 cut(s)	407, 963, 1003, 1198, 1382
BsuTUI	ATCGAT	1 cut(s)	642
BtsCI	GGATG	4 cut(s)	48, 195, 219, 1263
BtsI	GCAGTG	1 cut(s)	435
BtsIMutI	CAGTG	5 cut(s)	363, 435, 817, 930, 1386
BveI	ACCTGC	1 cut(s)	1218
Cac8I	GCNNGC	3 cut(s)	426, 454, 1038
CaiI	CAGNNNCTG	2 cut(s)	274, 1233
CciI	TCATGA	1 cut(s)	384
CfoI	GCGC	2 cut(s)	64, 159
Cfr10I	RCCGGY	2 cut(s)	424, 1036
Cfr13I	GGNCC	5 cut(s)	176, 773, 961, 1096, 1391
ClaI	ATCGAT	1 cut(s)	642
CsiI	ACCWGGT	1 cut(s)	1434
Csp6I	GTAC	3 cut(s)	145, 295, 1231
CviAII	CATG	5 cut(s)	38, 385, 463, 574, 637
CviQI	GTAC	3 cut(s)	145, 295, 1231
DdeI	CTNAG	9 cut(s)	30, 339, 416, 512, 675, 939, 1092, 1278, 1395
DpnI	GATC	6 cut(s)	641, 947, 1079, 1121, 1190, 1275
DpnII	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
DrdI	GACNNNNNNGTC	2 cut(s)	829, 1427
DriI	GACNNNNNGTC	1 cut(s)	814
DseDI	GACNNNNNNGTC	2 cut(s)	829, 1427
EaeI	YGGCCR	1 cut(s)	405
EagI	CGGCCG	1 cut(s)	405
Eam1104I	CTCTTC	3 cut(s)	843, 1290, 1358
Eam1105I	GACNNNNNGTC	1 cut(s)	814
EarI	CTCTTC	3 cut(s)	843, 1290, 1358
EciI	GGCGGA	2 cut(s)	359, 676
EclXI	CGGCCG	1 cut(s)	405
Eco147I	AGGCCT	1 cut(s)	1003
Eco24I	GRGCYC	1 cut(s)	888
Eco32I	GATATC	1 cut(s)	583
Eco47I	GGWCC	4 cut(s)	176, 773, 1096, 1391
Eco52I	CGGCCG	1 cut(s)	405
Eco57I	CTGAAG	1 cut(s)	295
Eco81I	CCTNAGG	2 cut(s)	1092, 1395
Eco88I	CYCGRG	1 cut(s)	171
EcoO109I	RGGNCCY	2 cut(s)	176, 961
EcoRII	CCWGG	3 cut(s)	287, 568, 1434
EcoRV	GATATC	1 cut(s)	583
EcoT22I	ATGCAT	1 cut(s)	50
EcoT38I	GRGCYC	1 cut(s)	888
Esp3I	CGTCTC	1 cut(s)	1049
FaeI	CATG	5 cut(s)	41, 388, 466, 577, 640
FaqI	GGGAC	1 cut(s)	162
FatI	CATG	5 cut(s)	37, 384, 462, 573, 636
FauI	CCCGC	3 cut(s)	312, 449, 1136
FbaI	TGATCA	1 cut(s)	1077
FblI	GTMKAC	1 cut(s)	762
Fnu4HI	GCNGC	3 cut(s)	364, 405, 672
FokI	GGATG	4 cut(s)	35, 182, 206, 1270
FriOI	GRGCYC	1 cut(s)	888
Fsp4HI	GCNGC	3 cut(s)	364, 405, 672
FspBI	CTAG	5 cut(s)	447, 785, 1010, 1355, 1445
GlaI	GCGC	2 cut(s)	63, 158
GluI	GCNGC	3 cut(s)	364, 405, 672
GsaI	CCCAGC	2 cut(s)	62, 1118
GsuI	CTGGAG	1 cut(s)	741
HaeII	RGCGCY	1 cut(s)	160
HaeIII	GGCC	5 cut(s)	407, 963, 1003, 1198, 1382
HapII	CCGG	2 cut(s)	425, 1037
HhaI	GCGC	2 cut(s)	64, 159
Hin1I	GRCGYC	1 cut(s)	726
Hin1II	CATG	5 cut(s)	41, 388, 466, 577, 640
Hin6I	GCGC	2 cut(s)	62, 157
HinP1I	GCGC	2 cut(s)	62, 157
HincII	GTYRAC	3 cut(s)	793, 907, 1432
HindII	GTYRAC	3 cut(s)	793, 907, 1432
HinfI	GANTC	5 cut(s)	245, 347, 815, 835, 875
HpaII	CCGG	2 cut(s)	425, 1037
HphI	GGTGA	2 cut(s)	342, 1283
Hpy166II	GTNNAC	6 cut(s)	285, 763, 793, 907, 1414, 1432
Hpy188I	TCNGA	6 cut(s)	340, 376, 614, 773, 914, 1124
Hpy8I	GTNNAC	6 cut(s)	285, 763, 793, 907, 1414, 1432
Hpy99I	CGWCG	2 cut(s)	194, 728
HpyAV	CCTTC	4 cut(s)	490, 586, 838, 1322
HpyCH4III	ACNGT	4 cut(s)	812, 925, 1159, 1235
HpyCH4IV	ACGT	2 cut(s)	726, 983
HpyCH4V	TGCA	4 cut(s)	48, 279, 1227, 1239
HpyF10VI	GCNNNNNNNGC	4 cut(s)	20, 430, 680, 1379
HpyF3I	CTNAG	9 cut(s)	30, 339, 416, 512, 675, 939, 1092, 1278, 1395
HpySE526I	ACGT	2 cut(s)	726, 983
Hsp92I	GRCGYC	1 cut(s)	726
Hsp92II	CATG	5 cut(s)	41, 388, 466, 577, 640
HspAI	GCGC	2 cut(s)	62, 157
KroI	GCCGGC	2 cut(s)	424, 1036
KroNI	GCCGGC	2 cut(s)	426, 1038
Ksp22I	TGATCA	1 cut(s)	1077
Kzo9I	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
LguI	GCTCTTC	1 cut(s)	1290
LmnI	GCTCC	4 cut(s)	105, 316, 1019, 1453
Lsp1109I	GCAGC	2 cut(s)	350, 683
LweI	GCATC	7 cut(s)	57, 204, 391, 493, 508, 927, 1031
MabI	ACCWGGT	1 cut(s)	1434
MaeI	CTAG	5 cut(s)	447, 785, 1010, 1355, 1445
MaeII	ACGT	2 cut(s)	726, 983
MaeIII	GTNAC	5 cut(s)	68, 467, 500, 524, 1384
MalI	GATC	6 cut(s)	641, 947, 1079, 1121, 1190, 1275
MboI	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
MhlI	GDGCHC	1 cut(s)	888
MlyI	GAGTC	3 cut(s)	239, 341, 824
Mph1103I	ATGCAT	1 cut(s)	50
MroNI	GCCGGC	2 cut(s)	424, 1036
MroXI	GAANNNNTTC	1 cut(s)	596
MseI	TTAA	4 cut(s)	17, 779, 1133, 1462
MslI	CAYNNNNRTG	2 cut(s)	923, 926
MspA1I	CMGCKG	2 cut(s)	943, 1143
MspI	CCGG	2 cut(s)	425, 1037
MspR9I	CCNGG	3 cut(s)	289, 570, 1436
Mva1269I	GAATGC	1 cut(s)	256
MvaI	CCWGG	3 cut(s)	289, 570, 1436
MwoI	GCNNNNNNNGC	4 cut(s)	20, 430, 680, 1379
NaeI	GCCGGC	2 cut(s)	426, 1038
NdeII	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
NgoMIV	GCCGGC	2 cut(s)	424, 1036
NlaIII	CATG	5 cut(s)	41, 388, 466, 577, 640
NlaIV	GGNNCC	5 cut(s)	178, 423, 775, 962, 1035
NmeAIII	GCCGAG	2 cut(s)	433, 1234
NmuCI	GTSAC	2 cut(s)	68, 1384
NsiI	ATGCAT	1 cut(s)	50
NspI	RCATGY	1 cut(s)	41
PagI	TCATGA	1 cut(s)	384
PceI	AGGCCT	1 cut(s)	1003
PciSI	GCTCTTC	1 cut(s)	1290
PcsI	WCGNNNNNNNCGW	3 cut(s)	138, 654, 729
PctI	GAATGC	1 cut(s)	256
PdiI	GCCGGC	2 cut(s)	426, 1038
PdmI	GAANNNNTTC	1 cut(s)	596
PfeI	GAWTC	2 cut(s)	835, 875
PflFI	GACNNNGTC	1 cut(s)	1100
PkrI	GCNGC	3 cut(s)	365, 406, 673
Ple19I	CGATCG	1 cut(s)	1122
PleI	GAGTC	3 cut(s)	239, 341, 823
PpsI	GAGTC	3 cut(s)	239, 341, 823
PpuMI	RGGWCCY	1 cut(s)	176
Psp5II	RGGWCCY	1 cut(s)	176
Psp6I	CCWGG	3 cut(s)	287, 568, 1434
PspFI	CCCAGC	2 cut(s)	58, 1114
PspGI	CCWGG	3 cut(s)	287, 568, 1434
PspN4I	GGNNCC	5 cut(s)	178, 423, 775, 962, 1035
PspPI	GGNCC	5 cut(s)	176, 773, 961, 1096, 1391
PspPPI	RGGWCCY	1 cut(s)	176
PsrI	GAACNNNNNNTAC	2 cut(s)	1214, 1246
PstI	CTGCAG	1 cut(s)	1229
PstNI	CAGNNNCTG	2 cut(s)	274, 1233
PsyI	GACNNNGTC	1 cut(s)	1100
PvuI	CGATCG	1 cut(s)	1122
PvuII	CAGCTG	1 cut(s)	943
RsaI	GTAC	3 cut(s)	146, 296, 1232
RsaNI	GTAC	3 cut(s)	145, 295, 1231
RseI	CAYNNNNRTG	2 cut(s)	923, 926
SapI	GCTCTTC	1 cut(s)	1290
SaqAI	TTAA	4 cut(s)	17, 779, 1133, 1462
SatI	GCNGC	3 cut(s)	364, 405, 672
Sau3AI	GATC	6 cut(s)	639, 945, 1077, 1119, 1188, 1273
Sau96I	GGNCC	5 cut(s)	176, 773, 961, 1096, 1391
ScaI	AGTACT	1 cut(s)	296
SchI	GAGTC	3 cut(s)	239, 341, 824
ScrFI	CCNGG	3 cut(s)	289, 570, 1436
SduI	GDGCHC	1 cut(s)	888
SexAI	ACCWGGT	1 cut(s)	1434
SfaNI	GCATC	7 cut(s)	57, 204, 391, 493, 508, 927, 1031
SfcI	CTRYAG	2 cut(s)	618, 1225
SinI	GGWCC	4 cut(s)	176, 773, 1096, 1391
SmiMI	CAYNNNNRTG	2 cut(s)	923, 926
SmlI	CTYRAG	2 cut(s)	86, 1105
SmoI	CTYRAG	2 cut(s)	86, 1105
SpeI	ACTAGT	1 cut(s)	446
SseBI	AGGCCT	1 cut(s)	1003
SsiI	CCGC	8 cut(s)	305, 344, 353, 404, 456, 687, 1143, 1173
SspI	AATATT	1 cut(s)	1460
SspMI	CTAG	5 cut(s)	447, 785, 1010, 1355, 1445
StuI	AGGCCT	1 cut(s)	1003
StyD4I	CCNGG	3 cut(s)	287, 568, 1434
TaaI	ACNGT	4 cut(s)	812, 925, 1159, 1235
TaiI	ACGT	2 cut(s)	729, 986
TaqI	TCGA	9 cut(s)	189, 248, 642, 732, 743, 807, 833, 948, 1161
TatI	WGTACW	2 cut(s)	144, 294
TauI	GCSGC	1 cut(s)	407
TfiI	GAWTC	2 cut(s)	835, 875
Tru1I	TTAA	4 cut(s)	17, 779, 1133, 1462
Tru9I	TTAA	4 cut(s)	17, 779, 1133, 1462
TscAI	CASTG	5 cut(s)	363, 435, 817, 930, 1393
TseFI	GTSAC	2 cut(s)	68, 1384
TseI	GCWGC	2 cut(s)	363, 671
Tsp45I	GTSAC	2 cut(s)	68, 1384
TspDTI	ATGAA	3 cut(s)	451, 590, 1355
TspGWI	ACGGA	1 cut(s)	575
TspRI	CASTG	5 cut(s)	363, 435, 817, 930, 1393
Tth111I	GACNNNGTC	1 cut(s)	1100
VpaK11BI	GGWCC	4 cut(s)	176, 773, 1096, 1391
XbaI	TCTAGA	1 cut(s)	1354
XceI	RCATGY	1 cut(s)	41
XmiI	GTMKAC	1 cut(s)	762
XmnI	GAANNNNTTC	1 cut(s)	596
XspI	CTAG	5 cut(s)	447, 785, 1010, 1355, 1445
ZraI	GACGTC	1 cut(s)	727
ZrmI	AGTACT	1 cut(s)	296
Zsp2I	ATGCAT	1 cut(s)	50

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.