FvH4_5g36980

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
27071438 .. 27073575
2138 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g36980.t1

Sequence Viewer

Length: 1461 bp
ATGGAGTGCAATGGCTTAACCTCAGAGAAGCCACATGCAGTGTGCATCCCATTCCCAGCACAAGGCCACATAAATCCAATGCTAAAAGTAGCTAAGCTCCTCCACTACAAAGGTTTTTATATAACCTTTGTCAACACAGAGTTCATACATAAACGCCTGCTGAAATCTCGAGGTCCAAACTCTCTTGACGGCTTCCCTTCCTTTCGGTTTGAGACAATTCCAGATGGTCTTCCTCCAACTGATGCAAACGTTGCCACACAACACATGCCATCGCTATGCGAGTCCACAAGGAAAAACTGCCTAGCACCCTTCAGAGACCTTCTTTTGAAGCTCAATTCTTCCCCAAATTCGCCTCCAGTGACCTGCATAGTTGCTGATGGCATCATGAACTTCACTCTTGATGCAGCCCAAGAACTTGGCCTTCCTGAAGTTATTTTCTGGACAACAAGTGCTTGTGGTTTCATGGGATACCTTCAATATTACAATCTCATCGAGAAGGGTTTGGTTCCTCTTAAAGATGACAGTTATTTGACAAACGGGTATTTGGATACAGTGATAGATTGGATTCCAGGAATGAAAGGAATCCAATTGAAGGATATCCCAACCTTCATGAGAACCACTGACCCAAATGACCCCATTCTGCACTTAATTTTGCACGATACAGAACAAGTTCAAAGAGCTTCTGCTATCATTTTGAACACATTTGATGCCTTAGAGCATGAAGTTCTAGAGGCAATTTCGCATTTGCTACCACCTATATACTCCATTGGACCCCTATACCTACAACTTAACCAGATACCAGCTGAAGATAGCAACTTCAAGTTGATTGGAGCAAATCTATGGAGAGAAGAACCAGACTGTTTTGAATGGCTTGACTCTAAAGAACCTAGTTCTGTGATATATGTCAACTTTGGAAGTAGTACAGTCATGACAGATGAGCAGCTAATTGAATTTGCTTGGGGACTTGCAGACAGCAGCAAGACCTTTTTTTGGGTCATTAGACCTGACCTGGTTGGGGGAGAATCACCTGTCCTGCCCCCAGAGTTTATAGAACAGACTAAAGAAAGAGGGCTACTAGCAAGTTGGTGCTGTCAAGAACAAGTCCTAAGCCATCCAGCTATAGGAGGGTTCTTGACTCATAGTGGCTGGAACTCAACCATTGAAAGTGTGTGTGGGGGAGTGCCGATGATCTGTTGGCCCTTCAACGGCGAGCAACAAACCAACTGTAGGTACTGTTGCAAAGAATGGGGTATAGGCATAGAGATGGAGGGTGATGTTAAGAGAAACTACATAGAAAGCGTTGTTAGGAAGTTAATGGAGGGAGAGGAAGGAAAAGAGATGAGGAAGAAATCCATGGAGTGGAAGAAGTTGGCAGAGAAGGCCACTACTGGCCCTCATGGCTCATCTTTCTTGGATTTGGACAATATGGTTAACCAGGTGCTGCTATCTCCAAGAGATTAG

Protein Analysis

487

Amino Acids

54.57

Weight (kDa)

5.03

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 14 - 140 1e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 291 - 446 2.8e-23 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 371
AccB7I CCANNNNNTGG 1 cut(s) 1359
AclI AACGTT 1 cut(s) 249
AcsI RAATTY 2 cut(s) 346, 950
AcuI CTGAAG 3 cut(s) 295, 447, 825
AfaI GTAC 2 cut(s) 922, 1232
AfiI CCNNNNNNNGG 8 cut(s) 62, 592, 990, 1015, 1121, 1205, 1227, 1359
AjnI CCWGG 3 cut(s) 568, 1008, 1434
AluBI AGCT 7 cut(s) 92, 97, 331, 680, 803, 943, 1118
AluI AGCT 7 cut(s) 92, 97, 331, 680, 803, 943, 1118
Alw26I GTCTC 2 cut(s) 206, 309
AlwNI CAGNNNCTG 1 cut(s) 1441
Ama87I CYCGRG 1 cut(s) 168
AoxI GGCC 5 cut(s) 64, 418, 1196, 1380, 1390
ApeKI GCWGC 4 cut(s) 404, 940, 975, 1441
ApoI RAATTY 2 cut(s) 346, 950
Asp700I GAANNNNTTC 1 cut(s) 669
AspS9I GGNCC 4 cut(s) 173, 770, 1197, 1391
AsuHPI GGTGA 2 cut(s) 1017, 1283
AvaI CYCGRG 1 cut(s) 168
AvaII GGWCC 2 cut(s) 173, 770
BbsI GAAGAC 1 cut(s) 221
BbvI GCAGC 4 cut(s) 416, 952, 987, 1428
BccI CCATC 5 cut(s) 218, 277, 371, 1119, 1258
BceAI ACGGC 2 cut(s) 205, 1222
BciT130I CCWGG 3 cut(s) 570, 1010, 1436
BciVI GTATCC 2 cut(s) 461, 541
BcoDI GTCTC 2 cut(s) 206, 309
BfaI CTAG 4 cut(s) 302, 728, 888, 1076
BfmI CTRYAG 2 cut(s) 1119, 1225
BfuAI ACCTGC 1 cut(s) 371
BfuI GTATCC 2 cut(s) 461, 541
BglI GCCNNNNNGGC 1 cut(s) 1398
BisI GCNGC 4 cut(s) 405, 941, 976, 1442
BlpI GCTNAGC 1 cut(s) 93
BlsI GCNGC 4 cut(s) 406, 942, 977, 1443
Bme1390I CCNGG 3 cut(s) 570, 1010, 1436
Bme18I GGWCC 2 cut(s) 173, 770
BmeT110I CYCGRG 1 cut(s) 168
BmgT120I GGNCC 4 cut(s) 173, 770, 1197, 1391
BmiI GGNNCC 2 cut(s) 507, 772
BmrFI CCNGG 3 cut(s) 570, 1010, 1436
BmsI GCATC 5 cut(s) 54, 232, 390, 391, 697
BpiI GAAGAC 1 cut(s) 221
BpmI CTGGAG 1 cut(s) 339
Bpu10I CCTNAGC 1 cut(s) 1106
Bpu1102I GCTNAGC 1 cut(s) 93
BsaI GGTCTC 1 cut(s) 309
BsaJI CCNNGG 1 cut(s) 1353
Bsc4I CCNNNNNNNGG 8 cut(s) 62, 592, 990, 1015, 1121, 1205, 1227, 1359
Bse1I ACTGG 2 cut(s) 356, 1393
Bse3DI GCAATG 1 cut(s) 16
BseBI CCWGG 3 cut(s) 570, 1010, 1436
BseDI CCNNGG 1 cut(s) 1353
BseGI GGATG 2 cut(s) 45, 1111
BseLI CCNNNNNNNGG 8 cut(s) 62, 592, 990, 1015, 1121, 1205, 1227, 1359
BseMI GCAATG 1 cut(s) 16
BseMII CTCAG 1 cut(s) 36
BseNI ACTGG 2 cut(s) 356, 1393
BseRI GAGGAG 1 cut(s) 89
BseXI GCAGC 4 cut(s) 416, 952, 987, 1428
BseYI CCCAGC 1 cut(s) 55
BsgI GTGCAG 1 cut(s) 626
BshFI GGCC 5 cut(s) 66, 420, 1198, 1382, 1392
BsiHKCI CYCGRG 1 cut(s) 168
BslFI GGGAC 1 cut(s) 975
BslI CCNNNNNNNGG 8 cut(s) 62, 592, 990, 1015, 1121, 1205, 1227, 1359
BsmAI GTCTC 2 cut(s) 206, 309
BsmFI GGGAC 1 cut(s) 975
BsnI GGCC 5 cut(s) 66, 420, 1198, 1382, 1392
Bso31I GGTCTC 1 cut(s) 309
BsoBI CYCGRG 1 cut(s) 168
Bsp143I GATC 1 cut(s) 1188
Bsp1720I GCTNAGC 1 cut(s) 93
Bsp19I CCATGG 1 cut(s) 1353
BspANI GGCC 5 cut(s) 66, 420, 1198, 1382, 1392
BspCNI CTCAG 1 cut(s) 35
BspHI TCATGA 3 cut(s) 384, 609, 927
BspLI GGNNCC 2 cut(s) 507, 772
BspMI ACCTGC 1 cut(s) 371
BspTNI GGTCTC 1 cut(s) 309
BsrDI GCAATG 1 cut(s) 16
BsrI ACTGG 2 cut(s) 356, 1393
BssECI CCNNGG 1 cut(s) 1353
BssMI GATC 1 cut(s) 1188
BssT1I CCWWGG 1 cut(s) 1353
Bst2UI CCWGG 3 cut(s) 570, 1010, 1436
Bst4CI ACNGT 6 cut(s) 524, 553, 860, 925, 1226, 1235
BstAPI GCANNNNNTGC 1 cut(s) 251
BstC8I GCNNGC 2 cut(s) 158, 1211
BstDEI CTNAG 4 cut(s) 22, 93, 712, 1106
BstDSI CCRYGG 1 cut(s) 1353
BstF5I GGATG 2 cut(s) 45, 1111
BstKTI GATC 1 cut(s) 1191
BstMAI GTCTC 2 cut(s) 206, 309
BstMBI GATC 1 cut(s) 1188
BstMWI GCNNNNNNNGC 3 cut(s) 251, 1379, 1398
BstNI CCWGG 3 cut(s) 570, 1010, 1436
BstNSI RCATGY 2 cut(s) 38, 268
BstSCI CCNGG 3 cut(s) 568, 1008, 1434
BstSFI CTRYAG 2 cut(s) 1119, 1225
BstV1I GCAGC 4 cut(s) 416, 952, 987, 1428
BstV2I GAAGAC 1 cut(s) 221
BstXI CCANNNNNNTGG 1 cut(s) 416
BsuI GTATCC 2 cut(s) 461, 541
BsuRI GGCC 5 cut(s) 66, 420, 1198, 1382, 1392
BtgI CCRYGG 1 cut(s) 1353
BtgZI GCGATG 1 cut(s) 255
BtsCI GGATG 2 cut(s) 45, 1111
BtsI GCAGTG 1 cut(s) 45
BtsIMutI CAGTG 4 cut(s) 45, 363, 558, 618
BveI ACCTGC 1 cut(s) 371
Cac8I GCNNGC 2 cut(s) 158, 1211
CaiI CAGNNNCTG 1 cut(s) 1441
CciI TCATGA 3 cut(s) 384, 609, 927
Cfr13I GGNCC 4 cut(s) 173, 770, 1197, 1391
CsiI ACCWGGT 2 cut(s) 1008, 1434
Csp6I GTAC 2 cut(s) 921, 1231
CviAII CATG 9 cut(s) 35, 265, 385, 463, 610, 719, 928, 1354, 1397
CviQI GTAC 2 cut(s) 921, 1231
DdeI CTNAG 4 cut(s) 22, 93, 712, 1106
DpnI GATC 1 cut(s) 1190
DpnII GATC 1 cut(s) 1188
Eco130I CCWWGG 1 cut(s) 1353
Eco31I GGTCTC 1 cut(s) 309
Eco32I GATATC 1 cut(s) 598
Eco47I GGWCC 2 cut(s) 173, 770
Eco57I CTGAAG 3 cut(s) 295, 447, 825
Eco88I CYCGRG 1 cut(s) 168
EcoRII CCWGG 3 cut(s) 568, 1008, 1434
EcoRV GATATC 1 cut(s) 598
EcoT14I CCWWGG 1 cut(s) 1353
ErhI CCWWGG 1 cut(s) 1353
FaeI CATG 9 cut(s) 38, 268, 388, 466, 613, 722, 931, 1357, 1400
FaqI GGGAC 1 cut(s) 975
FatI CATG 9 cut(s) 34, 264, 384, 462, 609, 718, 927, 1353, 1396
Fnu4HI GCNGC 4 cut(s) 405, 941, 976, 1442
FokI GGATG 2 cut(s) 32, 1098
Fsp4HI GCNGC 4 cut(s) 405, 941, 976, 1442
FspBI CTAG 4 cut(s) 302, 728, 888, 1076
GluI GCNGC 4 cut(s) 405, 941, 976, 1442
GsaI CCCAGC 1 cut(s) 59
GsuI CTGGAG 1 cut(s) 339
HaeIII GGCC 5 cut(s) 66, 420, 1198, 1382, 1392
Hin1II CATG 9 cut(s) 38, 268, 388, 466, 613, 722, 931, 1357, 1400
HincII GTYRAC 3 cut(s) 133, 907, 1432
HindII GTYRAC 3 cut(s) 133, 907, 1432
HinfI GANTC 6 cut(s) 281, 565, 582, 875, 1022, 1135
HpaI GTTAAC 1 cut(s) 1432
HphI GGTGA 2 cut(s) 1017, 1283
Hpy166II GTNNAC 4 cut(s) 133, 285, 907, 1432
Hpy188I TCNGA 2 cut(s) 25, 314
Hpy8I GTNNAC 4 cut(s) 133, 285, 907, 1432
HpyCH4III ACNGT 6 cut(s) 524, 553, 860, 925, 1226, 1235
HpyCH4IV ACGT 1 cut(s) 249
HpyF10VI GCNNNNNNNGC 3 cut(s) 251, 1379, 1398
HpyF3I CTNAG 4 cut(s) 22, 93, 712, 1106
HpySE526I ACGT 1 cut(s) 249
Hsp92II CATG 9 cut(s) 38, 268, 388, 466, 613, 722, 931, 1357, 1400
KspAI GTTAAC 1 cut(s) 1432
Kzo9I GATC 1 cut(s) 1188
LmnI GCTCC 2 cut(s) 102, 830
Lsp1109I GCAGC 4 cut(s) 416, 952, 987, 1428
LweI GCATC 5 cut(s) 54, 232, 390, 391, 697
MabI ACCWGGT 2 cut(s) 1008, 1434
MaeI CTAG 4 cut(s) 302, 728, 888, 1076
MaeII ACGT 1 cut(s) 249
MaeIII GTNAC 1 cut(s) 358
MalI GATC 1 cut(s) 1190
MboI GATC 1 cut(s) 1188
MboII GAAGA 6 cut(s) 221, 330, 818, 860, 1357, 1375
MfeI CAATTG 1 cut(s) 587
MluCI AATT 8 cut(s) 216, 334, 346, 587, 648, 735, 945, 950
MlyI GAGTC 3 cut(s) 290, 869, 1129
MmeI TCCRAC 1 cut(s) 260
MroXI GAANNNNTTC 1 cut(s) 669
MseI TTAA 7 cut(s) 17, 513, 647, 789, 1278, 1313, 1431
MslI CAYNNNNRTG 2 cut(s) 274, 1262
MspA1I CMGCKG 1 cut(s) 803
MspR9I CCNGG 3 cut(s) 570, 1010, 1436
MunI CAATTG 1 cut(s) 587
MvaI CCWGG 3 cut(s) 570, 1010, 1436
MwoI GCNNNNNNNGC 3 cut(s) 251, 1379, 1398
NcoI CCATGG 1 cut(s) 1353
NdeII GATC 1 cut(s) 1188
NlaIII CATG 9 cut(s) 38, 268, 388, 466, 613, 722, 931, 1357, 1400
NlaIV GGNNCC 2 cut(s) 507, 772
NmuCI GTSAC 1 cut(s) 358
NspI RCATGY 2 cut(s) 38, 268
PaeR7I CTCGAG 1 cut(s) 168
PagI TCATGA 3 cut(s) 384, 609, 927
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 3 cut(s) 565, 582, 1022
PflMI CCANNNNNTGG 1 cut(s) 1359
PfoI TCCNGGA 1 cut(s) 568
PkrI GCNGC 4 cut(s) 406, 942, 977, 1443
PleI GAGTC 3 cut(s) 289, 869, 1129
PpsI GAGTC 3 cut(s) 289, 869, 1129
Psp1406I AACGTT 1 cut(s) 249
Psp6I CCWGG 3 cut(s) 568, 1008, 1434
PspFI CCCAGC 1 cut(s) 55
PspGI CCWGG 3 cut(s) 568, 1008, 1434
PspN4I GGNNCC 2 cut(s) 507, 772
PspPI GGNCC 4 cut(s) 173, 770, 1197, 1391
PstNI CAGNNNCTG 1 cut(s) 1441
PvuII CAGCTG 1 cut(s) 803
RsaI GTAC 2 cut(s) 922, 1232
RsaNI GTAC 2 cut(s) 921, 1231
RseI CAYNNNNRTG 2 cut(s) 274, 1262
SaqAI TTAA 7 cut(s) 17, 513, 647, 789, 1278, 1313, 1431
SatI GCNGC 4 cut(s) 405, 941, 976, 1442
Sau3AI GATC 1 cut(s) 1188
Sau96I GGNCC 4 cut(s) 173, 770, 1197, 1391
SchI GAGTC 3 cut(s) 290, 869, 1129
ScrFI CCNGG 3 cut(s) 570, 1010, 1436
SexAI ACCWGGT 2 cut(s) 1008, 1434
SfaNI GCATC 5 cut(s) 54, 232, 390, 391, 697
SfcI CTRYAG 2 cut(s) 1119, 1225
Sfr274I CTCGAG 1 cut(s) 168
SinI GGWCC 2 cut(s) 173, 770
SlaI CTCGAG 1 cut(s) 168
SmiMI CAYNNNNRTG 2 cut(s) 274, 1262
SmlI CTYRAG 1 cut(s) 168
SmoI CTYRAG 1 cut(s) 168
Sse9I AATT 8 cut(s) 216, 334, 346, 587, 648, 735, 945, 950
SspI AATATT 1 cut(s) 479
SspMI CTAG 4 cut(s) 302, 728, 888, 1076
StyD4I CCNGG 3 cut(s) 568, 1008, 1434
StyI CCWWGG 1 cut(s) 1353
TaaI ACNGT 6 cut(s) 524, 553, 860, 925, 1226, 1235
TaiI ACGT 1 cut(s) 252
TaqI TCGA 2 cut(s) 169, 492
TasI AATT 8 cut(s) 216, 334, 346, 587, 648, 735, 945, 950
TatI WGTACW 1 cut(s) 920
TfiI GAWTC 3 cut(s) 565, 582, 1022
Tru1I TTAA 7 cut(s) 17, 513, 647, 789, 1278, 1313, 1431
Tru9I TTAA 7 cut(s) 17, 513, 647, 789, 1278, 1313, 1431
TscAI CASTG 4 cut(s) 45, 363, 558, 625
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 4 cut(s) 404, 940, 975, 1441
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 6 cut(s) 133, 401, 451, 590, 598, 735
TspRI CASTG 4 cut(s) 45, 363, 558, 625
Van91I CCANNNNNTGG 1 cut(s) 1359
VpaK11BI GGWCC 2 cut(s) 173, 770
XapI RAATTY 2 cut(s) 346, 950
XbaI TCTAGA 1 cut(s) 727
XceI RCATGY 2 cut(s) 38, 268
XhoI CTCGAG 1 cut(s) 168
XmnI GAANNNNTTC 1 cut(s) 669
XspI CTAG 4 cut(s) 302, 728, 888, 1076
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.