Prupe.1G520100_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000553
Physical Location & Seq
Reverse (-)
42684510 .. 42686498
1989 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G520100.1

Sequence Viewer

Length: 1449 bp
ATGGGTTCAAACGGCTTGATAGAGAAGCCACATGCAGTTTGCATACCATTCCCAGCTCAAGGCCACATTAACCCAATGCTGAAACTAGCCAAACTCCTCCACTACAAAGGTTTTCATATAACCTTTGTGAACACAGAGTTCAACCACAAACGCCTCCTTAAATCCAGAGGTCCCAACTCTCTCGATGGCCTTCCCTCCTTTCGATTCGAGACCATTCCCGACGGCCTGCCACTGACTGATGCCAATGCCACCCAAGACATACCATCCTTATGTGAATCCACTAGGAAACACAGCTTGCCTTACTTCAGAGACCTTTTGTCTAAGCTGAACTCTTCGACTGGTTGCCCTCCTGTAAGTTGTATAGTTTCTGATGGTGTCATGAGCTTCACTCTTGATGCAGCCCACGAACTCGGCATCCCAGAAGTGCTTTTCTGGACAACAAGTGCTTGCGGCTTCTTGGCCTATGTACACTACCACCGCCTCATTGAAAATGGTCTCACTCCTCTCAAAGATGCTAGTTATTTGACCAACGGCTATTTGGAGACGCAGATAGATTGGATACCAGGCATGAGAGGCATCCGACTAAAGGACATCCCCAGCTTCATTAGAACCACAGACCGAGATGATCTCATGCTGGATTTTCTGGTGCATGAAACAGAGCGAACTCGAAAAGCTTCTGCTGTCGTCTTGAACACCTTCCATGACTTGGAACATGAAGCTTTAGATGCACTTTCAACTTTGCTACCACCTATTTACTCCATTGGACCCCTACATTTACAGATTAACCAGATCCCGGCAGATAGCGAGTTGAAGGAGATAAGATCGAACCTATGGACAGAGGAACCAGAGTGTCTAGAATGGCTTGACTCTAAAGAACCTAACTCTGTGGTTTATGTCAACTTCGGAAGCATCACAGTGATGACAGCAGAGCAGCTAATTGAGTTTGCTTGGGGACTTGCAAACAGCAATCAGACCTTCTTTTGGGTGATTCGGCCTGATCTTGTTGGTGGGGATTCAGCTGTGGTTCCACCAGAGTTTGTGGAAGAGACCAAAGAAAGGAGCCTATTGGCACATTGGTGCCCTCAAGAACAAGTCCTGAGCCATCCGGCTGTAGGAGGGTTCTTGACTCACAGTGGTTGGAACTCTACTATTGAAAGTGTGTGTGCTGGAGTGCCCATGATCTGTTGGCCCTTCTTCGCAGAGCAACAAACCAATTGTAGGTACAGTGAGAAAGAGTGGGGCATTGGCATGGAGATTGAGAATGATGTTAAAAGAAACTACGTAGAGGGGCTTGTGAGAAAGTTAATGGAGGGAGAGGAGGGCAAAGATATGAGGAAGAAAGCTCTGGAATGGAAGAAGTTGGCAATGGAGGCCACCAGCCCTAATGGCTCATCATTTGTGGCTTTGGACAAAATGATTAACCAGGTGCTTCTATCTCCAAGAAATTAG

Protein Analysis

483

Amino Acids

54.18

Weight (kDa)

5.37

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1077
AccB7I CCANNNNNTGG 1 cut(s) 706
AciI CCGC 2 cut(s) 450, 478
AclWI GGATC 1 cut(s) 784
AcuI CTGAAG 1 cut(s) 289
AfaI GTAC 2 cut(s) 468, 1223
AfiI CCNNNNNNNGG 8 cut(s) 59, 586, 706, 793, 981, 1056, 1112, 1218
AgsI TTSAA 7 cut(s) 9, 142, 488, 691, 735, 811, 1154
AhdI GACNNNNNGTC 1 cut(s) 316
AjnI CCWGG 2 cut(s) 562, 1422
AleI CACNNNNGTG 1 cut(s) 1075
AloI GAACNNNNNNTCC 2 cut(s) 399, 431
Alw26I GTCTC 5 cut(s) 203, 303, 500, 536, 1040
AlwI GGATC 1 cut(s) 784
AoxI GGCC 7 cut(s) 61, 187, 223, 459, 992, 1187, 1371
ApeKI GCWGC 2 cut(s) 398, 931
Asp700I GAANNNNTTC 2 cut(s) 673, 695
AspS9I GGNCC 3 cut(s) 170, 764, 1188
AsuC2I CCSGG 1 cut(s) 794
AsuHPI GGTGA 1 cut(s) 997
AvaII GGWCC 2 cut(s) 170, 764
BaeGI GKGCMC 2 cut(s) 1082, 1176
BanI GGYRCC 1 cut(s) 1077
BbvI GCAGC 2 cut(s) 410, 943
BccI CCATC 4 cut(s) 179, 271, 365, 1110
BceAI ACGGC 3 cut(s) 28, 238, 547
BciT130I CCWGG 2 cut(s) 564, 1424
BciVI GTATCC 1 cut(s) 552
BcnI CCSGG 1 cut(s) 794
BcoDI GTCTC 5 cut(s) 203, 303, 500, 536, 1040
BfaI CTAG 4 cut(s) 86, 282, 516, 854
BfmI CTRYAG 1 cut(s) 1110
BfuI GTATCC 1 cut(s) 552
BglI GCCNNNNNGGC 1 cut(s) 1386
BisI GCNGC 3 cut(s) 399, 451, 932
BlsI GCNGC 3 cut(s) 400, 452, 933
Bme1390I CCNGG 3 cut(s) 564, 794, 1424
Bme18I GGWCC 2 cut(s) 170, 764
BmeRI GACNNNNNGTC 1 cut(s) 316
BmgT120I GGNCC 3 cut(s) 170, 764, 1188
BmiI GGNNCC 6 cut(s) 172, 766, 843, 1026, 1061, 1079
BmrFI CCNGG 3 cut(s) 564, 794, 1424
BmsI GCATC 7 cut(s) 229, 385, 423, 502, 585, 715, 918
BplI GAGNNNNNCTC 4 cut(s) 373, 405, 612, 644
BpmI CTGGAG 1 cut(s) 1188
Bpu10I CCTNAGC 1 cut(s) 1097
BpuEI CTTGAG 2 cut(s) 42, 1068
BpuMI CCSGG 1 cut(s) 794
BsaAI YACGTR 1 cut(s) 1282
BsaI GGTCTC 4 cut(s) 203, 303, 500, 1040
Bsc4I CCNNNNNNNGG 8 cut(s) 59, 586, 706, 793, 981, 1056, 1112, 1218
Bse1I ACTGG 1 cut(s) 343
Bse3DI GCAATG 1 cut(s) 1371
BseBI CCWGG 2 cut(s) 564, 1424
BseGI GGATG 5 cut(s) 263, 414, 576, 591, 1102
BseLI CCNNNNNNNGG 8 cut(s) 59, 586, 706, 793, 981, 1056, 1112, 1218
BseMI GCAATG 1 cut(s) 1371
BseMII CTCAG 1 cut(s) 1088
BseNI ACTGG 1 cut(s) 343
BseRI GAGGAG 3 cut(s) 86, 492, 1331
BseSI GKGCMC 2 cut(s) 1082, 1176
BseXI GCAGC 2 cut(s) 410, 943
BseYI CCCAGC 2 cut(s) 52, 596
BshFI GGCC 7 cut(s) 63, 189, 225, 461, 994, 1189, 1373
BshNI GGYRCC 1 cut(s) 1077
BsiSI CCGG 2 cut(s) 794, 1106
BslFI GGGAC 2 cut(s) 156, 966
BslI CCNNNNNNNGG 8 cut(s) 59, 586, 706, 793, 981, 1056, 1112, 1218
BsmAI GTCTC 5 cut(s) 203, 303, 500, 536, 1040
BsmBI CGTCTC 1 cut(s) 536
BsmFI GGGAC 2 cut(s) 156, 966
BsnI GGCC 7 cut(s) 63, 189, 225, 461, 994, 1189, 1373
Bso31I GGTCTC 4 cut(s) 203, 303, 500, 1040
Bsp1286I GDGCHC 2 cut(s) 1082, 1176
Bsp1407I TGTACA 1 cut(s) 466
Bsp143I GATC 5 cut(s) 625, 789, 821, 997, 1179
BspACI CCGC 2 cut(s) 450, 478
BspANI GGCC 7 cut(s) 63, 189, 225, 461, 994, 1189, 1373
BspCNI CTCAG 1 cut(s) 1089
BspHI TCATGA 1 cut(s) 378
BspLI GGNNCC 6 cut(s) 172, 766, 843, 1026, 1061, 1079
BspPI GGATC 1 cut(s) 784
BspT107I GGYRCC 1 cut(s) 1077
BspTNI GGTCTC 4 cut(s) 203, 303, 500, 1040
BsrDI GCAATG 1 cut(s) 1371
BsrGI TGTACA 1 cut(s) 466
BsrI ACTGG 1 cut(s) 343
BssMI GATC 5 cut(s) 625, 789, 821, 997, 1179
Bst2UI CCWGG 2 cut(s) 564, 1424
Bst4CI ACNGT 3 cut(s) 916, 1133, 1226
Bst6I CTCTTC 2 cut(s) 337, 1038
BstAUI TGTACA 1 cut(s) 466
BstBAI YACGTR 1 cut(s) 1282
BstC8I GCNNGC 3 cut(s) 227, 296, 448
BstDEI CTNAG 2 cut(s) 321, 1097
BstF5I GGATG 5 cut(s) 263, 414, 576, 591, 1102
BstKTI GATC 5 cut(s) 628, 792, 824, 1000, 1182
BstMAI GTCTC 5 cut(s) 203, 303, 500, 536, 1040
BstMBI GATC 5 cut(s) 625, 789, 821, 997, 1179
BstMWI GCNNNNNNNGC 4 cut(s) 573, 725, 1370, 1386
BstNI CCWGG 2 cut(s) 564, 1424
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 3 cut(s) 562, 792, 1422
BstSFI CTRYAG 1 cut(s) 1110
BstSLI GKGCMC 2 cut(s) 1082, 1176
BstSNI TACGTA 1 cut(s) 1282
BstV1I GCAGC 2 cut(s) 410, 943
BstX2I RGATCY 1 cut(s) 789
BstYI RGATCY 1 cut(s) 789
BsuI GTATCC 1 cut(s) 552
BsuRI GGCC 7 cut(s) 63, 189, 225, 461, 994, 1189, 1373
BtsCI GGATG 5 cut(s) 263, 414, 576, 591, 1102
BtsIMutI CAGTG 4 cut(s) 230, 921, 1138, 1231
Cac8I GCNNGC 3 cut(s) 227, 296, 448
CciI TCATGA 1 cut(s) 378
Cfr13I GGNCC 3 cut(s) 170, 764, 1188
CseI GACGC 1 cut(s) 553
CsiI ACCWGGT 1 cut(s) 1422
Csp6I GTAC 2 cut(s) 467, 1222
CviAII CATG 9 cut(s) 32, 379, 568, 631, 650, 701, 713, 1177, 1249
CviQI GTAC 2 cut(s) 467, 1222
DdeI CTNAG 2 cut(s) 321, 1097
DpnI GATC 5 cut(s) 627, 791, 823, 999, 1181
DpnII GATC 5 cut(s) 625, 789, 821, 997, 1179
DriI GACNNNNNGTC 1 cut(s) 316
Eam1104I CTCTTC 2 cut(s) 337, 1038
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 2 cut(s) 337, 1038
Eco105I TACGTA 1 cut(s) 1282
Eco31I GGTCTC 4 cut(s) 203, 303, 500, 1040
Eco47I GGWCC 2 cut(s) 170, 764
Eco57I CTGAAG 1 cut(s) 289
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 2 cut(s) 562, 1422
Esp3I CGTCTC 1 cut(s) 536
FaeI CATG 9 cut(s) 35, 382, 571, 634, 653, 704, 716, 1180, 1252
FaqI GGGAC 2 cut(s) 156, 966
FatI CATG 9 cut(s) 31, 378, 567, 630, 649, 700, 712, 1176, 1248
Fnu4HI GCNGC 3 cut(s) 399, 451, 932
FokI GGATG 5 cut(s) 250, 401, 563, 578, 1089
Fsp4HI GCNGC 3 cut(s) 399, 451, 932
FspBI CTAG 4 cut(s) 86, 282, 516, 854
GluI GCNGC 3 cut(s) 399, 451, 932
GsaI CCCAGC 2 cut(s) 56, 600
GsuI CTGGAG 1 cut(s) 1188
HaeIII GGCC 7 cut(s) 63, 189, 225, 461, 994, 1189, 1373
HapII CCGG 2 cut(s) 794, 1106
HgaI GACGC 1 cut(s) 553
Hin1II CATG 9 cut(s) 35, 382, 571, 634, 653, 704, 716, 1180, 1252
HincII GTYRAC 1 cut(s) 898
HindII GTYRAC 1 cut(s) 898
HindIII AAGCTT 2 cut(s) 672, 717
HinfI GANTC 6 cut(s) 204, 275, 866, 988, 1013, 1126
HpaII CCGG 2 cut(s) 794, 1106
HphI GGTGA 1 cut(s) 997
Hpy166II GTNNAC 3 cut(s) 130, 469, 898
Hpy188I TCNGA 5 cut(s) 308, 370, 581, 905, 972
Hpy8I GTNNAC 3 cut(s) 130, 469, 898
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 5 cut(s) 200, 706, 805, 985, 1201
HpyCH4III ACNGT 3 cut(s) 916, 1133, 1226
HpyCH4IV ACGT 1 cut(s) 1281
HpyCH4V TGCA 6 cut(s) 35, 42, 398, 649, 728, 959
HpyF10VI GCNNNNNNNGC 4 cut(s) 573, 725, 1370, 1386
HpyF3I CTNAG 2 cut(s) 321, 1097
HpySE526I ACGT 1 cut(s) 1281
Hsp92II CATG 9 cut(s) 35, 382, 571, 634, 653, 704, 716, 1180, 1252
Kzo9I GATC 5 cut(s) 625, 789, 821, 997, 1179
LmnI GCTCC 1 cut(s) 1059
Lsp1109I GCAGC 2 cut(s) 410, 943
LweI GCATC 7 cut(s) 229, 385, 423, 502, 585, 715, 918
MabI ACCWGGT 1 cut(s) 1422
MaeI CTAG 4 cut(s) 86, 282, 516, 854
MaeII ACGT 1 cut(s) 1281
MalI GATC 5 cut(s) 627, 791, 823, 999, 1181
MboI GATC 5 cut(s) 625, 789, 821, 997, 1179
MboII GAAGA 5 cut(s) 324, 1055, 1186, 1348, 1366
MfeI CAATTG 1 cut(s) 1213
MflI RGATCY 1 cut(s) 789
MhlI GDGCHC 2 cut(s) 1082, 1176
MluCI AATT 3 cut(s) 936, 1213, 1444
MlyI GAGTC 2 cut(s) 860, 1120
MmeI TCCRAC 2 cut(s) 604, 1118
MroXI GAANNNNTTC 2 cut(s) 673, 695
MseI TTAA 6 cut(s) 69, 159, 783, 1269, 1304, 1419
MslI CAYNNNNRTG 5 cut(s) 268, 914, 917, 1075, 1247
MspA1I CMGCKG 1 cut(s) 1019
MspI CCGG 2 cut(s) 794, 1106
MspR9I CCNGG 3 cut(s) 564, 794, 1424
MunI CAATTG 1 cut(s) 1213
MvaI CCWGG 2 cut(s) 564, 1424
MwoI GCNNNNNNNGC 4 cut(s) 573, 725, 1370, 1386
NciI CCSGG 1 cut(s) 794
NdeII GATC 5 cut(s) 625, 789, 821, 997, 1179
NlaIII CATG 9 cut(s) 35, 382, 571, 634, 653, 704, 716, 1180, 1252
NlaIV GGNNCC 6 cut(s) 172, 766, 843, 1026, 1061, 1079
NmeAIII GCCGAG 1 cut(s) 390
NspI RCATGY 1 cut(s) 35
OliI CACNNNNGTG 1 cut(s) 1075
PagI TCATGA 1 cut(s) 378
PdmI GAANNNNTTC 2 cut(s) 673, 695
PfeI GAWTC 4 cut(s) 204, 275, 988, 1013
PflMI CCANNNNNTGG 1 cut(s) 706
PkrI GCNGC 3 cut(s) 400, 452, 933
PleI GAGTC 2 cut(s) 860, 1120
PpsI GAGTC 2 cut(s) 860, 1120
Ppu21I YACGTR 1 cut(s) 1282
PpuMI RGGWCCY 1 cut(s) 170
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 2 cut(s) 562, 1422
PspFI CCCAGC 2 cut(s) 52, 596
PspGI CCWGG 2 cut(s) 562, 1422
PspN4I GGNNCC 6 cut(s) 172, 766, 843, 1026, 1061, 1079
PspPI GGNCC 3 cut(s) 170, 764, 1188
PspPPI RGGWCCY 1 cut(s) 170
PsuI RGATCY 1 cut(s) 789
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 2 cut(s) 468, 1223
RsaNI GTAC 2 cut(s) 467, 1222
RseI CAYNNNNRTG 5 cut(s) 268, 914, 917, 1075, 1247
SaqAI TTAA 6 cut(s) 69, 159, 783, 1269, 1304, 1419
SatI GCNGC 3 cut(s) 399, 451, 932
Sau3AI GATC 5 cut(s) 625, 789, 821, 997, 1179
Sau96I GGNCC 3 cut(s) 170, 764, 1188
SchI GAGTC 2 cut(s) 860, 1120
ScrFI CCNGG 3 cut(s) 564, 794, 1424
SduI GDGCHC 2 cut(s) 1082, 1176
SexAI ACCWGGT 1 cut(s) 1422
SfaNI GCATC 7 cut(s) 229, 385, 423, 502, 585, 715, 918
SfcI CTRYAG 1 cut(s) 1110
SinI GGWCC 2 cut(s) 170, 764
SmiMI CAYNNNNRTG 5 cut(s) 268, 914, 917, 1075, 1247
SmlI CTYRAG 2 cut(s) 57, 1083
SmoI CTYRAG 2 cut(s) 57, 1083
SnaBI TACGTA 1 cut(s) 1282
Sse9I AATT 3 cut(s) 936, 1213, 1444
SsiI CCGC 2 cut(s) 450, 478
SspMI CTAG 4 cut(s) 86, 282, 516, 854
StyD4I CCNGG 3 cut(s) 562, 792, 1422
TaaI ACNGT 3 cut(s) 916, 1133, 1226
TaiI ACGT 1 cut(s) 1284
TaqI TCGA 6 cut(s) 183, 202, 207, 335, 667, 824
TaqII GACCGA 1 cut(s) 633
TasI AATT 3 cut(s) 936, 1213, 1444
TatI WGTACW 1 cut(s) 466
TauI GCSGC 1 cut(s) 453
TfiI GAWTC 4 cut(s) 204, 275, 988, 1013
Tru1I TTAA 6 cut(s) 69, 159, 783, 1269, 1304, 1419
Tru9I TTAA 6 cut(s) 69, 159, 783, 1269, 1304, 1419
TscAI CASTG 4 cut(s) 237, 921, 1138, 1231
TseI GCWGC 2 cut(s) 398, 931
TspDTI ATGAA 4 cut(s) 104, 592, 666, 729
TspRI CASTG 4 cut(s) 237, 921, 1138, 1231
Van91I CCANNNNNTGG 1 cut(s) 706
VpaK11BI GGWCC 2 cut(s) 170, 764
XbaI TCTAGA 1 cut(s) 853
XceI RCATGY 1 cut(s) 35
XcmI CCANNNNNNNNNTGG 1 cut(s) 535
XmnI GAANNNNTTC 2 cut(s) 673, 695
XspI CTAG 4 cut(s) 86, 282, 516, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.