Rmu_sc0000780.1_g000003

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000780.1
Physical Location & Seq
Reverse (-)
33185 .. 34725
1541 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000780.1_g000003.1.cds

Sequence Viewer

Length: 1449 bp
atgggttccaaagcctcagagaagccacatgcagtttgcataccatacccagctcaaggtcacataaacccaatgctaaaattggctaaacttctccactacaaagggtttcatataacctttgtcaacacagtctacaaccatgagcgcctgcttaaatcccgaggcgccaaatcccttgatggacttccttcctttaggttcaagacaattccggatggcctccctccgactgatgccaatgccacccaacacataccatccctatgttattccactagaaaaaactgcttagcacccttcagaagccttctttcagaactcaattcttcgccaaacttcccgcctgttacttgcatagttgctgatggtggcatgaccttcactcttgatgcagcacaagagcttggccttccggaagttctcctcaagacccatagtgcttgtggcttcttgtgctaccttcactatgcccatctcattgaaaagggtcttactcctcttaaagatgccacttatttgacaaatggctatttggacactgtgatagattggataccaggcattagaagtatccgtttgagggacataccgaccttcattagaaccacagacccagatgacatcatgttgaaatatctcgcggttgagatggaaagagctcagagagcgtctgctatcgtaatcaacacattcgatgcgttggagcatgatgttttggaagcactgtcaagattgctaccacctgtttactccattggatctctacacctacaagtcaatcagatcctagcagataacgatttgaagtcaattggctcaaacctatggagcgaagaaccggagtgtctcgaatggctcgattccaaagcaccaaattctgtgatttacgtaaactttggaagtatcacagtgatgaaagacgagcagctgattgagtttgcttggggtcttgcaaatagcaacataacctttttgtgggtaattagaccggatcttgttgctgggaaattagcagtgcttcctcccgagtttgtggaagagaccaagggaaggagtatgttggcgagttggtgctctcaagaacaagtgttgaaccacccagctgtaggagggttcttgacacacagtgggtggaattctacgatagaaagtgtgtgcgctggagttcccatgatatgctggcccttctttgctgaccaacaaacaaattgtaggttctgttgcaaagaatggggtataggcatggagatagatggtgatgttaaaaggaattacatagaaggccttgcgagaaagttaatggaaggaaaggaaggcaaagagatgaggaagaaagccttggaatggaagaaattggcagaggaggccatcactgctcccaatggttcgtctttcttgaatttggacgagttggtcaaccagaagcttctttctcctaaaaattag

Protein Analysis

482

Amino Acids

53.72

Weight (kDa)

6.03

Isoelectric Point (pI)

39.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1415
AccB1I GGYRCC 1 cut(s) 167
AccI GTMKAC 1 cut(s) 135
AccII CGCG 1 cut(s) 644
AccIII TCCGGA 2 cut(s) 214, 415
AciI CCGC 2 cut(s) 344, 644
AclWI GGATC 3 cut(s) 769, 781, 1002
AcsI RAATTY 3 cut(s) 877, 1138, 1402
AcuI CTGAAG 1 cut(s) 286
AcyI GRCGYC 1 cut(s) 168
AdeI CACNNNGTG 1 cut(s) 1130
AfiI CCNNNNNNNGG 6 cut(s) 56, 583, 978, 1053, 1109, 1347
AgsI TTSAA 6 cut(s) 205, 485, 634, 808, 1096, 1402
AjnI CCWGG 1 cut(s) 559
AjuI GAANNNNNNNTTGG 2 cut(s) 1325, 1357
AluBI AGCT 6 cut(s) 53, 406, 662, 931, 1106, 1429
AluI AGCT 6 cut(s) 53, 406, 662, 931, 1106, 1429
Alw21I GWGCWC 2 cut(s) 664, 1079
Alw26I GTCTC 2 cut(s) 854, 1037
AlwI GGATC 3 cut(s) 769, 781, 1002
Ama87I CYCGRG 2 cut(s) 162, 1028
Aor13HI TCCGGA 2 cut(s) 214, 415
AoxI GGCC 5 cut(s) 220, 409, 1184, 1285, 1368
ApeKI GCWGC 2 cut(s) 395, 928
ApoI RAATTY 3 cut(s) 877, 1138, 1402
AspLEI GCGC 3 cut(s) 150, 170, 1163
AspS9I GGNCC 1 cut(s) 1185
AsuHPI GGTGA 1 cut(s) 1271
AvaI CYCGRG 2 cut(s) 162, 1028
BanI GGYRCC 1 cut(s) 167
BanII GRGCYC 1 cut(s) 664
Bbv12I GWGCWC 2 cut(s) 664, 1079
BbvI GCAGC 2 cut(s) 407, 940
BccI CCATC 8 cut(s) 176, 212, 268, 362, 483, 646, 1250, 1379
BciT130I CCWGG 1 cut(s) 561
BciVI GTATCC 2 cut(s) 549, 584
BcoDI GTCTC 2 cut(s) 854, 1037
BfaI CTAG 2 cut(s) 279, 791
BfmI CTRYAG 1 cut(s) 1107
BfoI RGCGCY 2 cut(s) 151, 171
BfuI GTATCC 2 cut(s) 549, 584
BisI GCNGC 2 cut(s) 396, 929
BlpI GCTNAGC 1 cut(s) 292
BlsI GCNGC 2 cut(s) 397, 930
Bme1390I CCNGG 1 cut(s) 561
BmeT110I CYCGRG 2 cut(s) 162, 1028
BmgT120I GGNCC 1 cut(s) 1185
BmiI GGNNCC 2 cut(s) 7, 169
BmrFI CCNGG 1 cut(s) 561
BmsI GCATC 4 cut(s) 226, 382, 499, 688
BpmI CTGGAG 1 cut(s) 1185
Bpu1102I GCTNAGC 1 cut(s) 292
BpuEI CTTGAG 3 cut(s) 39, 413, 1065
BsaAI YACGTR 1 cut(s) 892
BsaHI GRCGYC 1 cut(s) 168
BsaI GGTCTC 1 cut(s) 1037
BsaJI CCNNGG 3 cut(s) 163, 1047, 1341
BsaWI WCCGGW 4 cut(s) 214, 415, 841, 991
Bsc4I CCNNNNNNNGG 6 cut(s) 56, 583, 978, 1053, 1109, 1347
BseAI TCCGGA 2 cut(s) 214, 415
BseBI CCWGG 1 cut(s) 561
BseDI CCNNGG 3 cut(s) 163, 1047, 1341
BseGI GGATG 2 cut(s) 223, 260
BseLI CCNNNNNNNGG 6 cut(s) 56, 583, 978, 1053, 1109, 1347
BseMII CTCAG 2 cut(s) 30, 677
BseRI GAGGAG 3 cut(s) 416, 489, 1379
BseXI GCAGC 2 cut(s) 407, 940
BseYI CCCAGC 3 cut(s) 49, 1004, 1102
Bsh1236I CGCG 1 cut(s) 644
BshFI GGCC 5 cut(s) 222, 411, 1186, 1287, 1370
BshNI GGYRCC 1 cut(s) 167
BsiHKAI GWGCWC 2 cut(s) 664, 1079
BsiHKCI CYCGRG 2 cut(s) 162, 1028
BsiSI CCGG 4 cut(s) 215, 416, 842, 992
BslFI GGGAC 1 cut(s) 599
BslI CCNNNNNNNGG 6 cut(s) 56, 583, 978, 1053, 1109, 1347
BsmAI GTCTC 2 cut(s) 854, 1037
BsmFI GGGAC 1 cut(s) 599
BsnI GGCC 5 cut(s) 222, 411, 1186, 1287, 1370
Bso31I GGTCTC 1 cut(s) 1037
BsoBI CYCGRG 2 cut(s) 162, 1028
Bsp1286I GDGCHC 2 cut(s) 664, 1079
Bsp13I TCCGGA 2 cut(s) 214, 415
Bsp143I GATC 3 cut(s) 761, 786, 994
Bsp1720I GCTNAGC 1 cut(s) 292
BspACI CCGC 2 cut(s) 344, 644
BspANI GGCC 5 cut(s) 222, 411, 1186, 1287, 1370
BspCNI CTCAG 2 cut(s) 29, 676
BspEI TCCGGA 2 cut(s) 214, 415
BspFNI CGCG 1 cut(s) 644
BspLI GGNNCC 2 cut(s) 7, 169
BspPI GGATC 3 cut(s) 769, 781, 1002
BspT107I GGYRCC 1 cut(s) 167
BspTNI GGTCTC 1 cut(s) 1037
BssECI CCNNGG 3 cut(s) 163, 1047, 1341
BssMI GATC 3 cut(s) 761, 786, 994
BssNI GRCGYC 1 cut(s) 168
BssT1I CCWWGG 2 cut(s) 1047, 1341
Bst2UI CCWGG 1 cut(s) 561
Bst4CI ACNGT 5 cut(s) 133, 544, 729, 913, 1130
Bst6I CTCTTC 1 cut(s) 1035
BstACI GRCGYC 1 cut(s) 168
BstBAI YACGTR 1 cut(s) 892
BstC8I GCNNGC 2 cut(s) 152, 1184
BstDEI CTNAG 3 cut(s) 16, 292, 663
BstF5I GGATG 2 cut(s) 223, 260
BstFNI CGCG 1 cut(s) 644
BstH2I RGCGCY 2 cut(s) 151, 171
BstHHI GCGC 3 cut(s) 150, 170, 1163
BstKTI GATC 3 cut(s) 764, 789, 997
BstMAI GTCTC 2 cut(s) 854, 1037
BstMBI GATC 3 cut(s) 761, 786, 994
BstMWI GCNNNNNNNGC 4 cut(s) 456, 668, 1367, 1376
BstNI CCWGG 1 cut(s) 561
BstNSI RCATGY 1 cut(s) 32
BstSCI CCNGG 1 cut(s) 559
BstSFI CTRYAG 1 cut(s) 1107
BstSNI TACGTA 1 cut(s) 892
BstUI CGCG 1 cut(s) 644
BstV1I GCAGC 2 cut(s) 407, 940
BstX2I RGATCY 3 cut(s) 761, 786, 994
BstYI RGATCY 3 cut(s) 761, 786, 994
BsuI GTATCC 2 cut(s) 549, 584
BsuRI GGCC 5 cut(s) 222, 411, 1186, 1287, 1370
BtsCI GGATG 2 cut(s) 223, 260
BtsI GCAGTG 2 cut(s) 1023, 1374
BtsIMutI CAGTG 6 cut(s) 540, 725, 918, 1023, 1135, 1374
Cac8I GCNNGC 2 cut(s) 152, 1184
CfoI GCGC 3 cut(s) 150, 170, 1163
Cfr13I GGNCC 1 cut(s) 1185
CseI GACGC 1 cut(s) 660
CviAII CATG 7 cut(s) 29, 143, 376, 628, 710, 1174, 1246
DdeI CTNAG 3 cut(s) 16, 292, 663
DinI GGCGCC 1 cut(s) 169
DpnI GATC 3 cut(s) 763, 788, 996
DpnII GATC 3 cut(s) 761, 786, 994
DraIII CACNNNGTG 1 cut(s) 1130
DrdI GACNNNNNNGTC 1 cut(s) 1415
DseDI GACNNNNNNGTC 1 cut(s) 1415
Eam1104I CTCTTC 1 cut(s) 1035
EarI CTCTTC 1 cut(s) 1035
Ecl136II GAGCTC 1 cut(s) 662
Eco105I TACGTA 1 cut(s) 892
Eco130I CCWWGG 2 cut(s) 1047, 1341
Eco147I AGGCCT 1 cut(s) 1287
Eco24I GRGCYC 1 cut(s) 664
Eco31I GGTCTC 1 cut(s) 1037
Eco53kI GAGCTC 1 cut(s) 662
Eco57I CTGAAG 1 cut(s) 286
Eco88I CYCGRG 2 cut(s) 162, 1028
EcoICRI GAGCTC 1 cut(s) 662
EcoRI GAATTC 1 cut(s) 1138
EcoRII CCWGG 1 cut(s) 559
EcoT14I CCWWGG 2 cut(s) 1047, 1341
EcoT38I GRGCYC 1 cut(s) 664
EgeI GGCGCC 1 cut(s) 169
EheI GGCGCC 1 cut(s) 169
ErhI CCWWGG 2 cut(s) 1047, 1341
FaeI CATG 7 cut(s) 32, 146, 379, 631, 713, 1177, 1249
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 1 cut(s) 599
FatI CATG 7 cut(s) 28, 142, 375, 627, 709, 1173, 1245
FauI CCCGC 1 cut(s) 351
FblI GTMKAC 1 cut(s) 135
Fnu4HI GCNGC 2 cut(s) 396, 929
FokI GGATG 2 cut(s) 230, 247
FriOI GRGCYC 1 cut(s) 664
Fsp4HI GCNGC 2 cut(s) 396, 929
FspBI CTAG 2 cut(s) 279, 791
GlaI GCGC 3 cut(s) 149, 169, 1162
GluI GCNGC 2 cut(s) 396, 929
GsaI CCCAGC 3 cut(s) 53, 1008, 1106
GsuI CTGGAG 1 cut(s) 1185
HaeII RGCGCY 2 cut(s) 151, 171
HaeIII GGCC 5 cut(s) 222, 411, 1186, 1287, 1370
HapII CCGG 4 cut(s) 215, 416, 842, 992
HgaI GACGC 1 cut(s) 660
HhaI GCGC 3 cut(s) 150, 170, 1163
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 7 cut(s) 32, 146, 379, 631, 713, 1177, 1249
Hin6I GCGC 3 cut(s) 148, 168, 1161
HinP1I GCGC 3 cut(s) 148, 168, 1161
HincII GTYRAC 2 cut(s) 127, 1420
HindII GTYRAC 2 cut(s) 127, 1420
HindIII AAGCTT 1 cut(s) 1427
HinfI GANTC 1 cut(s) 863
HpaII CCGG 4 cut(s) 215, 416, 842, 992
HphI GGTGA 1 cut(s) 1271
Hpy166II GTNNAC 5 cut(s) 127, 136, 751, 895, 1420
Hpy188I TCNGA 6 cut(s) 19, 231, 305, 319, 666, 786
Hpy8I GTNNAC 5 cut(s) 127, 136, 751, 895, 1420
HpyCH4III ACNGT 5 cut(s) 133, 544, 729, 913, 1130
HpyCH4IV ACGT 1 cut(s) 891
HpyCH4V TGCA 6 cut(s) 32, 39, 357, 395, 956, 1227
HpyF10VI GCNNNNNNNGC 4 cut(s) 456, 668, 1367, 1376
HpyF3I CTNAG 3 cut(s) 16, 292, 663
HpySE526I ACGT 1 cut(s) 891
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 7 cut(s) 32, 146, 379, 631, 713, 1177, 1249
HspAI GCGC 3 cut(s) 148, 168, 1161
KasI GGCGCC 1 cut(s) 167
Kpn2I TCCGGA 2 cut(s) 214, 415
Kzo9I GATC 3 cut(s) 761, 786, 994
LmnI GCTCC 3 cut(s) 706, 831, 1384
Lsp1109I GCAGC 2 cut(s) 407, 940
LweI GCATC 4 cut(s) 226, 382, 499, 688
MaeI CTAG 2 cut(s) 279, 791
MaeII ACGT 1 cut(s) 891
MaeIII GTNAC 2 cut(s) 59, 349
MalI GATC 3 cut(s) 763, 788, 996
MboI GATC 3 cut(s) 761, 786, 994
MboII GAAGA 5 cut(s) 321, 848, 1052, 1345, 1363
MfeI CAATTG 1 cut(s) 813
MflI RGATCY 3 cut(s) 761, 786, 994
MhlI GDGCHC 2 cut(s) 664, 1079
Mly113I GGCGCC 1 cut(s) 168
MmeI TCCRAC 2 cut(s) 254, 684
MroI TCCGGA 2 cut(s) 214, 415
MseI TTAA 4 cut(s) 156, 504, 1266, 1301
MslI CAYNNNNRTG 2 cut(s) 265, 914
MspA1I CMGCKG 2 cut(s) 931, 1106
MspI CCGG 4 cut(s) 215, 416, 842, 992
MspR9I CCNGG 1 cut(s) 561
MunI CAATTG 1 cut(s) 813
MvaI CCWGG 1 cut(s) 561
MvnI CGCG 1 cut(s) 644
MwoI GCNNNNNNNGC 4 cut(s) 456, 668, 1367, 1376
NarI GGCGCC 1 cut(s) 168
NdeII GATC 3 cut(s) 761, 786, 994
NlaIII CATG 7 cut(s) 32, 146, 379, 631, 713, 1177, 1249
NlaIV GGNNCC 2 cut(s) 7, 169
NmuCI GTSAC 1 cut(s) 59
NspI RCATGY 1 cut(s) 32
PceI AGGCCT 1 cut(s) 1287
PcsI WCGNNNNNNNCGW 1 cut(s) 858
PfeI GAWTC 1 cut(s) 863
PkrI GCNGC 2 cut(s) 397, 930
PluTI GGCGCC 1 cut(s) 171
Ppu21I YACGTR 1 cut(s) 892
Psp124BI GAGCTC 1 cut(s) 664
Psp6I CCWGG 1 cut(s) 559
PspFI CCCAGC 3 cut(s) 49, 1004, 1102
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 2 cut(s) 7, 169
PspPI GGNCC 1 cut(s) 1185
PsuI RGATCY 3 cut(s) 761, 786, 994
PvuII CAGCTG 2 cut(s) 931, 1106
RseI CAYNNNNRTG 2 cut(s) 265, 914
SacI GAGCTC 1 cut(s) 664
SaqAI TTAA 4 cut(s) 156, 504, 1266, 1301
SatI GCNGC 2 cut(s) 396, 929
Sau3AI GATC 3 cut(s) 761, 786, 994
Sau96I GGNCC 1 cut(s) 1185
ScrFI CCNGG 1 cut(s) 561
SduI GDGCHC 2 cut(s) 664, 1079
SfaNI GCATC 4 cut(s) 226, 382, 499, 688
SfcI CTRYAG 1 cut(s) 1107
SfoI GGCGCC 1 cut(s) 169
SmiMI CAYNNNNRTG 2 cut(s) 265, 914
SmlI CTYRAG 3 cut(s) 54, 428, 1080
SmoI CTYRAG 3 cut(s) 54, 428, 1080
SnaBI TACGTA 1 cut(s) 892
SseBI AGGCCT 1 cut(s) 1287
SsiI CCGC 2 cut(s) 344, 644
SspDI GGCGCC 1 cut(s) 167
SspMI CTAG 2 cut(s) 279, 791
SstI GAGCTC 1 cut(s) 664
StuI AGGCCT 1 cut(s) 1287
StyD4I CCNGG 1 cut(s) 559
StyI CCWWGG 2 cut(s) 1047, 1341
TaaI ACNGT 5 cut(s) 133, 544, 729, 913, 1130
TaiI ACGT 1 cut(s) 894
TaqI TCGA 3 cut(s) 696, 852, 861
TfiI GAWTC 1 cut(s) 863
Tru1I TTAA 4 cut(s) 156, 504, 1266, 1301
Tru9I TTAA 4 cut(s) 156, 504, 1266, 1301
TscAI CASTG 6 cut(s) 547, 732, 918, 1023, 1135, 1381
TseFI GTSAC 1 cut(s) 59
TseI GCWGC 2 cut(s) 395, 928
Tsp45I GTSAC 1 cut(s) 59
TspDTI ATGAA 3 cut(s) 101, 589, 932
TspGWI ACGGA 1 cut(s) 566
TspRI CASTG 6 cut(s) 547, 732, 918, 1023, 1135, 1381
XapI RAATTY 3 cut(s) 877, 1138, 1402
XceI RCATGY 1 cut(s) 32
XcmI CCANNNNNNNNNTGG 1 cut(s) 443
XmiI GTMKAC 1 cut(s) 135
XspI CTAG 2 cut(s) 279, 791
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.