pycom08g15890

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Forward (+)
15728161 .. 15729765
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g15890.2

Sequence Viewer

Length: 1452 bp
ATGGTTTCGATTACTTTGGCAGAAAAGCCGCATGCAGTTTGCGTACCATTCCCAGCTCAAGGTCACATAAACCCTATGCTCAACGTAGCCAAACTCCTCCACTTCAAAGGCTTTCACATAACCTTTGTCAACACAGAGTTCAACCACAAACGCCTCCTCAAATCCCAAGGTTCCAACTCCCTTGACGGCCTTCCCTCTTTCCAGTTCGAGACCATTCCCGATGGGCTCCCTCCAATAAATGCCAATGTTACCCAAGACATACCATCTTTGTGTCATTCCACTAAGAAAACATGCTTGCCTCACTTCAGAGAGCTTTTGTCCAAGCTCAACTCTTCGCCCGATTCACCTCCTGTGAGTTGCATAGTTTCCGATGGTGTCATGAGCTTCACTCTTGATGCAGCTCAGGAACTAGGGATTCCCGAAGTGCTTTTCTGGACAACAAGTGCTTGTGGCTTCTTGGCCTACATGCAGTTTTACCGTCTCATTGAAAAGGGTCACACTCCTCTTAAAGATGCCAGCTATTTGACAAACGGGTATTTGGATACCGTGATAGATTGGATACCAGGAATGAAAGATATCCGATTGAAGGACATTCCAAGCTTCATGAGAACTACAGAACCCGATGACCAAATGCTGGATTTTATTCTGGTTGAGACAGAACGAGCAAAAAAGGCTTCAGCAATTATATTGAACACATTCCATGACTTTGAACGTGAAGTTTTAGATGCACTTTCAACTCTGCTTCCGCCTGTTTACTCCATCGGACCTCTAAATCTACAAATCGGTCAGATTCCGGTGGATAAAGAGTTGAAGTCGATCAGATCGAACCTATGGATTGAGGAACCAGAGTGCCTTGAGTGGCTTCACACTAAAGAGCCCAACTCTGTGGTTTATGTTAACTTTGGAAGCATCACGGTTATGACAAATGAGCAGCTAACTGAGTTTGCATGGGGACTTGCAAATTGTAAGAAGACCTTTTTGTGGGTAATTAGGCCTGACTTAGTTGGTGGGGATTCAGCTGTGGTTCCTCCGGAGTTTGTGGAGGAGACCAAAGATAGGAGCCTAATGGCAAGTTGGTGTCCTCAGGAACAAGTTCTAAGTCACCCAGCTATCGGAGGGTTTTTGACGCACTGCGGATGGAACTCTACCCTTGAAAGCGTGTGCGGTGGAGTGCCAATGGTTTGCTGGCCCTTCTTTGCGGAACAACAAACCAATTGCAGGTTCAGTTGCAAAGAGTTGGGCATTGGGTTGGAGATTGAAGGCGATGTGAAAAGGAAATATGTGGAGGGGCTTGTGAGAAAGTTAATGGACGGGAAGGAGGGCAAAGAAATGAGAAAGAAAGCCTTGGAGTGGAAAAAGTTGGCAAAGGAGGCCAGTAGTGGTCCTAATGGATCATCTTTTGTGGATTTCGACAAAATGGTCAACCAGGTGCTTCTATCACAAAAAGAGTAG

Protein Analysis

484

Amino Acids

54.09

Weight (kDa)

5.56

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1418
Acc36I ACCTGC 1 cut(s) 1209
AccB7I CCANNNNNTGG 1 cut(s) 634
AccIII TCCGGA 1 cut(s) 1030
AciI CCGC 5 cut(s) 29, 746, 1134, 1164, 1199
AclWI GGATC 1 cut(s) 1399
AcuI CTGAAG 2 cut(s) 289, 660
AfaI GTAC 1 cut(s) 45
AfiI CCNNNNNNNGG 8 cut(s) 59, 586, 634, 981, 1056, 1112, 1218, 1350
AjnI CCWGG 2 cut(s) 562, 1425
AjuI GAANNNNNNNTTGG 2 cut(s) 1205, 1237
Alw26I GTCTC 4 cut(s) 203, 485, 647, 1040
AlwI GGATC 1 cut(s) 1399
Aor13HI TCCGGA 1 cut(s) 1030
AoxI GGCC 5 cut(s) 187, 459, 992, 1187, 1371
ApeKI GCWGC 2 cut(s) 398, 931
Asp700I GAANNNNTTC 2 cut(s) 695, 1092
AspS9I GGNCC 3 cut(s) 764, 1188, 1382
AsuHPI GGTGA 2 cut(s) 336, 1094
AvaII GGWCC 2 cut(s) 764, 1382
AxyI CCTNAGG 1 cut(s) 1083
BanII GRGCYC 2 cut(s) 228, 879
BbsI GAAGAC 1 cut(s) 977
BbvI GCAGC 2 cut(s) 410, 943
BccI CCATC 5 cut(s) 215, 271, 365, 767, 1131
BceAI ACGGC 1 cut(s) 202
BciT130I CCWGG 2 cut(s) 564, 1427
BciVI GTATCC 2 cut(s) 535, 552
BcoDI GTCTC 4 cut(s) 203, 485, 647, 1040
BfaI CTAG 1 cut(s) 410
BfmI CTRYAG 1 cut(s) 612
BfuAI ACCTGC 1 cut(s) 1209
BfuI GTATCC 2 cut(s) 535, 552
BisI GCNGC 3 cut(s) 29, 399, 932
BlsI GCNGC 3 cut(s) 30, 400, 933
Bme1390I CCNGG 2 cut(s) 564, 1427
Bme18I GGWCC 2 cut(s) 764, 1382
BmgT120I GGNCC 3 cut(s) 764, 1188, 1382
BmiI GGNNCC 5 cut(s) 172, 227, 843, 1026, 1061
BmrFI CCNGG 2 cut(s) 564, 1427
BmsI GCATC 4 cut(s) 385, 502, 715, 918
BpiI GAAGAC 1 cut(s) 977
BplI GAGNNNNNCTC 4 cut(s) 373, 405, 866, 898
Bpu10I CCTNAGC 1 cut(s) 402
BpuEI CTTGAG 2 cut(s) 42, 875
BsaI GGTCTC 2 cut(s) 203, 1040
BsaJI CCNNGG 2 cut(s) 166, 1344
BsaWI WCCGGW 2 cut(s) 793, 1030
Bsc4I CCNNNNNNNGG 8 cut(s) 59, 586, 634, 981, 1056, 1112, 1218, 1350
Bse1I ACTGG 2 cut(s) 202, 1374
Bse21I CCTNAGG 1 cut(s) 1083
BseAI TCCGGA 1 cut(s) 1030
BseBI CCWGG 2 cut(s) 564, 1427
BseDI CCNNGG 2 cut(s) 166, 1344
BseGI GGATG 1 cut(s) 1142
BseLI CCNNNNNNNGG 8 cut(s) 59, 586, 634, 981, 1056, 1112, 1218, 1350
BseMII CTCAG 3 cut(s) 416, 930, 1097
BseNI ACTGG 2 cut(s) 202, 1374
BseRI GAGGAG 4 cut(s) 86, 146, 492, 1058
BseXI GCAGC 2 cut(s) 410, 943
BseYI CCCAGC 2 cut(s) 52, 1105
BshFI GGCC 5 cut(s) 189, 461, 994, 1189, 1373
BsiSI CCGG 2 cut(s) 794, 1031
BslFI GGGAC 1 cut(s) 966
BslI CCNNNNNNNGG 8 cut(s) 59, 586, 634, 981, 1056, 1112, 1218, 1350
BsmAI GTCTC 4 cut(s) 203, 485, 647, 1040
BsmBI CGTCTC 1 cut(s) 485
BsmFI GGGAC 1 cut(s) 966
BsnI GGCC 5 cut(s) 189, 461, 994, 1189, 1373
Bso31I GGTCTC 2 cut(s) 203, 1040
Bsp1286I GDGCHC 2 cut(s) 228, 879
Bsp13I TCCGGA 1 cut(s) 1030
Bsp143I GATC 3 cut(s) 816, 821, 1391
BspACI CCGC 5 cut(s) 29, 746, 1134, 1164, 1199
BspANI GGCC 5 cut(s) 189, 461, 994, 1189, 1373
BspCNI CTCAG 3 cut(s) 415, 931, 1096
BspEI TCCGGA 1 cut(s) 1030
BspHI TCATGA 2 cut(s) 378, 603
BspLI GGNNCC 5 cut(s) 172, 227, 843, 1026, 1061
BspMI ACCTGC 1 cut(s) 1209
BspPI GGATC 1 cut(s) 1399
BspTNI GGTCTC 2 cut(s) 203, 1040
BsrI ACTGG 2 cut(s) 202, 1374
BssECI CCNNGG 2 cut(s) 166, 1344
BssMI GATC 3 cut(s) 816, 821, 1391
BssT1I CCWWGG 2 cut(s) 166, 1344
Bst2UI CCWGG 2 cut(s) 564, 1427
Bst4CI ACNGT 3 cut(s) 479, 547, 916
Bst6I CTCTTC 1 cut(s) 337
BstC8I GCNNGC 4 cut(s) 33, 296, 517, 1187
BstDEI CTNAG 6 cut(s) 282, 402, 939, 1000, 1083, 1097
BstF5I GGATG 1 cut(s) 1142
BstKTI GATC 3 cut(s) 819, 824, 1394
BstMAI GTCTC 4 cut(s) 203, 485, 647, 1040
BstMBI GATC 3 cut(s) 816, 821, 1391
BstMWI GCNNNNNNNGC 2 cut(s) 671, 1370
BstNI CCWGG 2 cut(s) 564, 1427
BstNSI RCATGY 3 cut(s) 35, 294, 469
BstSCI CCNGG 2 cut(s) 562, 1425
BstSFI CTRYAG 1 cut(s) 612
BstV1I GCAGC 2 cut(s) 410, 943
BstV2I GAAGAC 1 cut(s) 977
BstXI CCANNNNNNTGG 1 cut(s) 886
Bsu36I CCTNAGG 1 cut(s) 1083
BsuI GTATCC 2 cut(s) 535, 552
BsuRI GGCC 5 cut(s) 189, 461, 994, 1189, 1373
BtgZI GCGATG 1 cut(s) 1278
BtsCI GGATG 1 cut(s) 1142
BtsI GCAGTG 1 cut(s) 1129
BtsIMutI CAGTG 1 cut(s) 1129
BveI ACCTGC 1 cut(s) 1209
Cac8I GCNNGC 4 cut(s) 33, 296, 517, 1187
CciI TCATGA 2 cut(s) 378, 603
Cfr13I GGNCC 3 cut(s) 764, 1188, 1382
CseI GACGC 1 cut(s) 1135
CsiI ACCWGGT 1 cut(s) 1425
Csp6I GTAC 1 cut(s) 44
CviAII CATG 7 cut(s) 32, 291, 379, 466, 604, 701, 948
CviQI GTAC 1 cut(s) 44
DdeI CTNAG 6 cut(s) 282, 402, 939, 1000, 1083, 1097
DpnI GATC 3 cut(s) 818, 823, 1393
DpnII GATC 3 cut(s) 816, 821, 1391
DrdI GACNNNNNNGTC 1 cut(s) 1418
DseDI GACNNNNNNGTC 1 cut(s) 1418
Eam1104I CTCTTC 1 cut(s) 337
EarI CTCTTC 1 cut(s) 337
EciI GGCGGA 1 cut(s) 735
Eco130I CCWWGG 2 cut(s) 166, 1344
Eco147I AGGCCT 1 cut(s) 994
Eco24I GRGCYC 2 cut(s) 228, 879
Eco31I GGTCTC 2 cut(s) 203, 1040
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 2 cut(s) 764, 1382
Eco57I CTGAAG 2 cut(s) 289, 660
Eco81I CCTNAGG 1 cut(s) 1083
EcoRII CCWGG 2 cut(s) 562, 1425
EcoRV GATATC 1 cut(s) 577
EcoT14I CCWWGG 2 cut(s) 166, 1344
EcoT38I GRGCYC 2 cut(s) 228, 879
ErhI CCWWGG 2 cut(s) 166, 1344
Esp3I CGTCTC 1 cut(s) 485
FaeI CATG 7 cut(s) 35, 294, 382, 469, 607, 704, 951
FalI AAGNNNNNCTT 4 cut(s) 959, 991, 1328, 1360
FaqI GGGAC 1 cut(s) 966
FatI CATG 7 cut(s) 31, 290, 378, 465, 603, 700, 947
Fnu4HI GCNGC 3 cut(s) 29, 399, 932
FokI GGATG 1 cut(s) 1149
FriOI GRGCYC 2 cut(s) 228, 879
Fsp4HI GCNGC 3 cut(s) 29, 399, 932
FspBI CTAG 1 cut(s) 410
GluI GCNGC 3 cut(s) 29, 399, 932
GsaI CCCAGC 2 cut(s) 56, 1109
HaeIII GGCC 5 cut(s) 189, 461, 994, 1189, 1373
HapII CCGG 2 cut(s) 794, 1031
HgaI GACGC 1 cut(s) 1135
Hin1II CATG 7 cut(s) 35, 294, 382, 469, 607, 704, 951
HincII GTYRAC 3 cut(s) 130, 898, 1423
HindII GTYRAC 3 cut(s) 130, 898, 1423
HindIII AAGCTT 1 cut(s) 598
HinfI GANTC 4 cut(s) 341, 415, 790, 1013
HpaI GTTAAC 1 cut(s) 898
HpaII CCGG 2 cut(s) 794, 1031
HphI GGTGA 2 cut(s) 336, 1094
Hpy166II GTNNAC 4 cut(s) 130, 754, 898, 1423
Hpy188I TCNGA 7 cut(s) 308, 370, 581, 764, 789, 821, 1115
Hpy8I GTNNAC 4 cut(s) 130, 754, 898, 1423
HpyAV CCTTC 5 cut(s) 200, 580, 1201, 1253, 1309
HpyCH4III ACNGT 3 cut(s) 479, 547, 916
HpyCH4IV ACGT 2 cut(s) 84, 712
HpyCH4V TGCA 9 cut(s) 35, 360, 398, 469, 728, 947, 959, 1218, 1230
HpyF10VI GCNNNNNNNGC 2 cut(s) 671, 1370
HpyF3I CTNAG 6 cut(s) 282, 402, 939, 1000, 1083, 1097
HpySE526I ACGT 2 cut(s) 84, 712
Hsp92II CATG 7 cut(s) 35, 294, 382, 469, 607, 704, 951
Kpn2I TCCGGA 1 cut(s) 1030
KspAI GTTAAC 1 cut(s) 898
Kzo9I GATC 3 cut(s) 816, 821, 1391
LmnI GCTCC 2 cut(s) 231, 1059
Lsp1109I GCAGC 2 cut(s) 410, 943
LweI GCATC 4 cut(s) 385, 502, 715, 918
MabI ACCWGGT 1 cut(s) 1425
MaeI CTAG 1 cut(s) 410
MaeII ACGT 2 cut(s) 84, 712
MaeIII GTNAC 4 cut(s) 62, 247, 494, 1100
MalI GATC 3 cut(s) 818, 823, 1393
MboI GATC 3 cut(s) 816, 821, 1391
MboII GAAGA 2 cut(s) 324, 982
MfeI CAATTG 1 cut(s) 1213
MhlI GDGCHC 2 cut(s) 228, 879
MluCI AATT 4 cut(s) 681, 961, 987, 1213
MmeI TCCRAC 2 cut(s) 198, 1230
MroI TCCGGA 1 cut(s) 1030
MroXI GAANNNNTTC 2 cut(s) 695, 1092
MseI TTAA 3 cut(s) 507, 897, 1304
MslI CAYNNNNRTG 2 cut(s) 268, 917
MspA1I CMGCKG 1 cut(s) 1019
MspI CCGG 2 cut(s) 794, 1031
MspR9I CCNGG 2 cut(s) 564, 1427
MunI CAATTG 1 cut(s) 1213
MvaI CCWGG 2 cut(s) 564, 1427
MwoI GCNNNNNNNGC 2 cut(s) 671, 1370
NdeII GATC 3 cut(s) 816, 821, 1391
NlaIII CATG 7 cut(s) 35, 294, 382, 469, 607, 704, 951
NlaIV GGNNCC 5 cut(s) 172, 227, 843, 1026, 1061
NmuCI GTSAC 3 cut(s) 62, 494, 1100
NspI RCATGY 3 cut(s) 35, 294, 469
PaeI GCATGC 1 cut(s) 35
PagI TCATGA 2 cut(s) 378, 603
PceI AGGCCT 1 cut(s) 994
PcsI WCGNNNNNNNCGW 1 cut(s) 821
PdmI GAANNNNTTC 2 cut(s) 695, 1092
PfeI GAWTC 4 cut(s) 341, 415, 790, 1013
PflMI CCANNNNNTGG 1 cut(s) 634
PkrI GCNGC 3 cut(s) 30, 400, 933
Psp6I CCWGG 2 cut(s) 562, 1425
PspFI CCCAGC 2 cut(s) 52, 1105
PspGI CCWGG 2 cut(s) 562, 1425
PspN4I GGNNCC 5 cut(s) 172, 227, 843, 1026, 1061
PspPI GGNCC 3 cut(s) 764, 1188, 1382
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 1 cut(s) 45
RsaNI GTAC 1 cut(s) 44
RseI CAYNNNNRTG 2 cut(s) 268, 917
SaqAI TTAA 3 cut(s) 507, 897, 1304
SatI GCNGC 3 cut(s) 29, 399, 932
Sau3AI GATC 3 cut(s) 816, 821, 1391
Sau96I GGNCC 3 cut(s) 764, 1188, 1382
ScrFI CCNGG 2 cut(s) 564, 1427
SduI GDGCHC 2 cut(s) 228, 879
SexAI ACCWGGT 1 cut(s) 1425
SfaNI GCATC 4 cut(s) 385, 502, 715, 918
SfcI CTRYAG 1 cut(s) 612
SinI GGWCC 2 cut(s) 764, 1382
SmiMI CAYNNNNRTG 2 cut(s) 268, 917
SmlI CTYRAG 2 cut(s) 57, 854
SmoI CTYRAG 2 cut(s) 57, 854
SphI GCATGC 1 cut(s) 35
Sse9I AATT 4 cut(s) 681, 961, 987, 1213
SseBI AGGCCT 1 cut(s) 994
SsiI CCGC 5 cut(s) 29, 746, 1134, 1164, 1199
SspMI CTAG 1 cut(s) 410
StuI AGGCCT 1 cut(s) 994
StyD4I CCNGG 2 cut(s) 562, 1425
StyI CCWWGG 2 cut(s) 166, 1344
TaaI ACNGT 3 cut(s) 479, 547, 916
TaiI ACGT 2 cut(s) 87, 715
TaqI TCGA 5 cut(s) 8, 207, 815, 824, 1410
TaqII GACCGA 1 cut(s) 773
TasI AATT 4 cut(s) 681, 961, 987, 1213
TauI GCSGC 1 cut(s) 31
TfiI GAWTC 4 cut(s) 341, 415, 790, 1013
Tru1I TTAA 3 cut(s) 507, 897, 1304
Tru9I TTAA 3 cut(s) 507, 897, 1304
TscAI CASTG 1 cut(s) 1136
TseFI GTSAC 3 cut(s) 62, 494, 1100
TseI GCWGC 2 cut(s) 398, 931
Tsp45I GTSAC 3 cut(s) 62, 494, 1100
TspDTI ATGAA 2 cut(s) 584, 592
TspRI CASTG 1 cut(s) 1136
Van91I CCANNNNNTGG 1 cut(s) 634
VpaK11BI GGWCC 2 cut(s) 764, 1382
XceI RCATGY 3 cut(s) 35, 294, 469
XcmI CCANNNNNNNNNTGG 1 cut(s) 1182
XmnI GAANNNNTTC 2 cut(s) 695, 1092
XspI CTAG 1 cut(s) 410
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.