Prupe.1G520200_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000553
Physical Location & Seq
Reverse (-)
42691434 .. 42693619
2186 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G520200.1

Sequence Viewer

Length: 1443 bp
ATGAGTTCAAATTGTTTGATAGAGAAGCCACATGCAGTTTGCATACCATTTCCAGCTCAAGGACACATTAACCCAATGCTGAAACTAGCCAAACTCCTCCACTACAAAGGTTTTCATATAACTTTTGTGAACACTGAGTTTAACCACAAACGCCTCCTTAAATCCCGAGGTCCCAACTCTCTTGATGGCTTTCCATCCTTTCGATTCGAGACCATCCCCGACGGCCTGCCTCCAACTGATGCCAATGCCACCCAAGACATACCATCCTTATGTGATTCCACTAGGAAACGCGGCTTGCCTTACTTCAGAGACCTTTTGTCCAAGCTTAACTCTTCGCCCGATTGCCCTCCTGTAAGTTGCGTAGTTTCTGACGGTGCCATGGGCTTCACTCTTGATGCAGCCCAAGAACTTGGCCTTCCAGAAGTGCTTTTCTGGACAACCAGTGCTTGTGGCTTCTTGGCCTATGTACACTACCACCGCCTCATTGAAAAGGGTCTAACTCCTCTCAAAGATGCCAGTTATTTGACAAACGGCTATTTGGAGACTGAGATAGATTGGATACCAGGCATGAGAGGCATCCGACTAAAGGACATCCCCAGCTTCATTAGAACCACAGACCCAGATGATATCATGCTGGATTTTGTGGTGCATGAAACAGAGCGAACTCGAAAAGCTTCTGCTGTCATCTTTAACACCTTCCATGACTTTGAACATGAAGTTTTAAATGCACTTTCGACTTTGCTACCACCTATTTACTCCATTGGACCCCTACATCTACAGATTAATCAGATCCCGGCAGATAGCGAGTTGAAGGAGATAAGATCAAACCTATGGACAGAAGAACCAGAGTGTCTAGAATGGCTTGACTCTAAAGAACCTAACTCTGTGGTTTATGTCAACTTTGGAAGCATCACAGTGATGACAGCAGAGCAGCTAATTGAGTTTGCTTGGGGACTTGCAAATAGCAACCAGACCTTCTTTTGGGTGATTAGGCCTGACCTTGTTGGAGGGGATTCAGCTGTGGTTCCACCAGAGTTTGTGGAAGAGACCAAAGAAAGGAGCCTGTTGGCAAATTGGTGCCCTCAAGAACAAGTCCTGAGCCATCCGGCTGTAGGAGGGTTCTTGACTCACAGCGGTTGGAACTCTACTATTGAAAGTGTGTGTGCTGGAGTGCCCATGATCTGCTGGCCCTTCTTCGCGGAGCAACAGACCAATTGTAGGTACAGTGAGAAAGAGTGGGCCATTGGCATGGAGATAGAGAGTGATGTTAAAAGAAACTACGTAGAGGGGCTTGTGAGAAAATTAATGGAGGGAGACGAGGGCAAAGAGATGAGGAAGAAAGCCCTGGAATGGAAAAAGTTGGCAACGGAGGCCATCAGTCCTAATGGCTCATCTTTTGTGGGTTTGGACAAAATGGTTAACCAGGTGCTTCTATCTCCATGA

Protein Analysis

481

Amino Acids

53.93

Weight (kDa)

5.17

Isoelectric Point (pI)

46.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 374, 1077
AccII CGCG 2 cut(s) 291, 1199
AciI CCGC 4 cut(s) 291, 478, 1134, 1199
AclWI GGATC 1 cut(s) 784
AcuI CTGAAG 1 cut(s) 289
AfaI GTAC 2 cut(s) 468, 1223
AfiI CCNNNNNNNGG 7 cut(s) 59, 586, 981, 1056, 1112, 1218, 1350
AgsI TTSAA 5 cut(s) 9, 488, 710, 811, 1154
AhdI GACNNNNNGTC 1 cut(s) 316
AjnI CCWGG 3 cut(s) 562, 1344, 1422
AluBI AGCT 6 cut(s) 56, 325, 600, 674, 934, 1019
AluI AGCT 6 cut(s) 56, 325, 600, 674, 934, 1019
Alw26I GTCTC 5 cut(s) 203, 303, 536, 1040, 1308
AlwI GGATC 1 cut(s) 784
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 7 cut(s) 223, 412, 459, 992, 1187, 1239, 1371
ApeKI GCWGC 2 cut(s) 398, 931
AseI ATTAAT 2 cut(s) 783, 1304
Asp700I GAANNNNTTC 1 cut(s) 673
AspS9I GGNCC 4 cut(s) 170, 764, 1188, 1239
AsuC2I CCSGG 1 cut(s) 794
AsuHPI GGTGA 1 cut(s) 997
AvaI CYCGRG 1 cut(s) 165
AvaII GGWCC 2 cut(s) 170, 764
BaeGI GKGCMC 2 cut(s) 1082, 1176
BanI GGYRCC 2 cut(s) 374, 1077
BbvI GCAGC 2 cut(s) 410, 943
BccI CCATC 6 cut(s) 179, 202, 221, 271, 1110, 1382
BceAI ACGGC 2 cut(s) 238, 547
BciT130I CCWGG 3 cut(s) 564, 1346, 1424
BciVI GTATCC 1 cut(s) 552
BcnI CCSGG 1 cut(s) 794
BcoDI GTCTC 5 cut(s) 203, 303, 536, 1040, 1308
BfaI CTAG 3 cut(s) 86, 282, 854
BfmI CTRYAG 2 cut(s) 776, 1110
BfuI GTATCC 1 cut(s) 552
BisI GCNGC 3 cut(s) 292, 399, 932
BlsI GCNGC 3 cut(s) 293, 400, 933
Bme1390I CCNGG 4 cut(s) 564, 794, 1346, 1424
Bme18I GGWCC 2 cut(s) 170, 764
BmeRI GACNNNNNGTC 1 cut(s) 316
BmeT110I CYCGRG 1 cut(s) 165
BmgT120I GGNCC 4 cut(s) 170, 764, 1188, 1239
BmiI GGNNCC 6 cut(s) 172, 376, 766, 1026, 1061, 1079
BmrFI CCNGG 4 cut(s) 564, 794, 1346, 1424
BmsI GCATC 5 cut(s) 229, 385, 502, 585, 918
BpmI CTGGAG 1 cut(s) 1188
Bpu10I CCTNAGC 1 cut(s) 1097
BpuEI CTTGAG 2 cut(s) 42, 1068
BpuMI CCSGG 1 cut(s) 794
BsaAI YACGTR 1 cut(s) 1282
BsaI GGTCTC 3 cut(s) 203, 303, 1040
BsaJI CCNNGG 3 cut(s) 166, 378, 1344
Bsc4I CCNNNNNNNGG 7 cut(s) 59, 586, 981, 1056, 1112, 1218, 1350
Bse1I ACTGG 2 cut(s) 441, 516
BseBI CCWGG 3 cut(s) 564, 1346, 1424
BseDI CCNNGG 3 cut(s) 166, 378, 1344
BseGI GGATG 6 cut(s) 194, 213, 263, 576, 591, 1102
BseLI CCNNNNNNNGG 7 cut(s) 59, 586, 981, 1056, 1112, 1218, 1350
BseMII CTCAG 3 cut(s) 126, 537, 1088
BseNI ACTGG 2 cut(s) 441, 516
BseRI GAGGAG 2 cut(s) 86, 492
BseSI GKGCMC 2 cut(s) 1082, 1176
BseXI GCAGC 2 cut(s) 410, 943
BseYI CCCAGC 1 cut(s) 596
Bsh1236I CGCG 2 cut(s) 291, 1199
BshFI GGCC 7 cut(s) 225, 414, 461, 994, 1189, 1241, 1373
BshNI GGYRCC 2 cut(s) 374, 1077
BsiHKCI CYCGRG 1 cut(s) 165
BsiSI CCGG 2 cut(s) 794, 1106
BslFI GGGAC 2 cut(s) 156, 966
BslI CCNNNNNNNGG 7 cut(s) 59, 586, 981, 1056, 1112, 1218, 1350
BsmAI GTCTC 5 cut(s) 203, 303, 536, 1040, 1308
BsmBI CGTCTC 1 cut(s) 1308
BsmFI GGGAC 2 cut(s) 156, 966
BsnI GGCC 7 cut(s) 225, 414, 461, 994, 1189, 1241, 1373
Bso31I GGTCTC 3 cut(s) 203, 303, 1040
BsoBI CYCGRG 1 cut(s) 165
Bsp1286I GDGCHC 2 cut(s) 1082, 1176
Bsp1407I TGTACA 1 cut(s) 466
Bsp143I GATC 3 cut(s) 789, 821, 1179
Bsp19I CCATGG 1 cut(s) 378
BspACI CCGC 4 cut(s) 291, 478, 1134, 1199
BspANI GGCC 7 cut(s) 225, 414, 461, 994, 1189, 1241, 1373
BspCNI CTCAG 3 cut(s) 127, 538, 1089
BspFNI CGCG 2 cut(s) 291, 1199
BspLI GGNNCC 6 cut(s) 172, 376, 766, 1026, 1061, 1079
BspPI GGATC 1 cut(s) 784
BspT107I GGYRCC 2 cut(s) 374, 1077
BspTNI GGTCTC 3 cut(s) 203, 303, 1040
BsrGI TGTACA 1 cut(s) 466
BsrI ACTGG 2 cut(s) 441, 516
BssECI CCNNGG 3 cut(s) 166, 378, 1344
BssMI GATC 3 cut(s) 789, 821, 1179
BssT1I CCWWGG 1 cut(s) 378
Bst2UI CCWGG 3 cut(s) 564, 1346, 1424
Bst4CI ACNGT 3 cut(s) 374, 916, 1226
Bst6I CTCTTC 2 cut(s) 337, 1038
BstAUI TGTACA 1 cut(s) 466
BstBAI YACGTR 1 cut(s) 1282
BstC8I GCNNGC 3 cut(s) 227, 296, 1187
BstDEI CTNAG 3 cut(s) 135, 546, 1097
BstDSI CCRYGG 1 cut(s) 378
BstF5I GGATG 6 cut(s) 194, 213, 263, 576, 591, 1102
BstFNI CGCG 2 cut(s) 291, 1199
BstKTI GATC 3 cut(s) 792, 824, 1182
BstMAI GTCTC 5 cut(s) 203, 303, 536, 1040, 1308
BstMBI GATC 3 cut(s) 789, 821, 1179
BstMWI GCNNNNNNNGC 2 cut(s) 573, 1370
BstNI CCWGG 3 cut(s) 564, 1346, 1424
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 4 cut(s) 562, 792, 1344, 1422
BstSFI CTRYAG 2 cut(s) 776, 1110
BstSLI GKGCMC 2 cut(s) 1082, 1176
BstSNI TACGTA 1 cut(s) 1282
BstUI CGCG 2 cut(s) 291, 1199
BstV1I GCAGC 2 cut(s) 410, 943
BstX2I RGATCY 1 cut(s) 789
BstXI CCANNNNNNTGG 2 cut(s) 410, 1249
BstYI RGATCY 1 cut(s) 789
BsuI GTATCC 1 cut(s) 552
BsuRI GGCC 7 cut(s) 225, 414, 461, 994, 1189, 1241, 1373
BtgI CCRYGG 1 cut(s) 378
BtsCI GGATG 6 cut(s) 194, 213, 263, 576, 591, 1102
BtsIMutI CAGTG 4 cut(s) 132, 448, 921, 1231
Cac8I GCNNGC 3 cut(s) 227, 296, 1187
Cfr13I GGNCC 4 cut(s) 170, 764, 1188, 1239
CsiI ACCWGGT 1 cut(s) 1422
Csp6I GTAC 2 cut(s) 467, 1222
CviQI GTAC 2 cut(s) 467, 1222
DdeI CTNAG 3 cut(s) 135, 546, 1097
DpnI GATC 3 cut(s) 791, 823, 1181
DpnII GATC 3 cut(s) 789, 821, 1179
DraI TTTAAA 1 cut(s) 723
DriI GACNNNNNGTC 1 cut(s) 316
Eam1104I CTCTTC 2 cut(s) 337, 1038
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 2 cut(s) 337, 1038
Eco105I TACGTA 1 cut(s) 1282
Eco130I CCWWGG 1 cut(s) 378
Eco147I AGGCCT 1 cut(s) 994
Eco31I GGTCTC 3 cut(s) 203, 303, 1040
Eco32I GATATC 1 cut(s) 628
Eco47I GGWCC 2 cut(s) 170, 764
Eco57I CTGAAG 1 cut(s) 289
Eco88I CYCGRG 1 cut(s) 165
EcoO109I RGGNCCY 1 cut(s) 170
EcoRII CCWGG 3 cut(s) 562, 1344, 1422
EcoRV GATATC 1 cut(s) 628
EcoT14I CCWWGG 1 cut(s) 378
ErhI CCWWGG 1 cut(s) 378
Esp3I CGTCTC 1 cut(s) 1308
FaqI GGGAC 2 cut(s) 156, 966
Fnu4HI GCNGC 3 cut(s) 292, 399, 932
FokI GGATG 6 cut(s) 181, 200, 250, 563, 578, 1089
Fsp4HI GCNGC 3 cut(s) 292, 399, 932
FspBI CTAG 3 cut(s) 86, 282, 854
GluI GCNGC 3 cut(s) 292, 399, 932
GsaI CCCAGC 1 cut(s) 600
GsuI CTGGAG 1 cut(s) 1188
HaeIII GGCC 7 cut(s) 225, 414, 461, 994, 1189, 1241, 1373
HapII CCGG 2 cut(s) 794, 1106
HincII GTYRAC 2 cut(s) 898, 1420
HindII GTYRAC 2 cut(s) 898, 1420
HindIII AAGCTT 2 cut(s) 323, 672
HinfI GANTC 5 cut(s) 204, 275, 866, 1013, 1126
HpaI GTTAAC 1 cut(s) 1420
HpaII CCGG 2 cut(s) 794, 1106
HphI GGTGA 1 cut(s) 997
Hpy166II GTNNAC 4 cut(s) 130, 469, 898, 1420
Hpy188I TCNGA 4 cut(s) 308, 370, 581, 789
Hpy8I GTNNAC 4 cut(s) 130, 469, 898, 1420
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 5 cut(s) 425, 706, 805, 985, 1201
HpyCH4III ACNGT 3 cut(s) 374, 916, 1226
HpyCH4IV ACGT 1 cut(s) 1281
HpyCH4V TGCA 6 cut(s) 35, 42, 398, 649, 728, 959
HpyF10VI GCNNNNNNNGC 2 cut(s) 573, 1370
HpyF3I CTNAG 3 cut(s) 135, 546, 1097
HpySE526I ACGT 1 cut(s) 1281
KspAI GTTAAC 1 cut(s) 1420
Kzo9I GATC 3 cut(s) 789, 821, 1179
LmnI GCTCC 2 cut(s) 1059, 1201
Lsp1109I GCAGC 2 cut(s) 410, 943
LweI GCATC 5 cut(s) 229, 385, 502, 585, 918
MabI ACCWGGT 1 cut(s) 1422
MaeI CTAG 3 cut(s) 86, 282, 854
MaeII ACGT 1 cut(s) 1281
MalI GATC 3 cut(s) 791, 823, 1181
MboI GATC 3 cut(s) 789, 821, 1179
MboII GAAGA 5 cut(s) 324, 851, 1055, 1186, 1348
MfeI CAATTG 1 cut(s) 1213
MflI RGATCY 1 cut(s) 789
MhlI GDGCHC 2 cut(s) 1082, 1176
MluCI AATT 5 cut(s) 10, 936, 1072, 1213, 1301
MlyI GAGTC 2 cut(s) 860, 1120
MmeI TCCRAC 4 cut(s) 257, 604, 985, 1118
MroXI GAANNNNTTC 1 cut(s) 673
MslI CAYNNNNRTG 4 cut(s) 268, 914, 917, 1247
MspA1I CMGCKG 2 cut(s) 1019, 1134
MspI CCGG 2 cut(s) 794, 1106
MspR9I CCNGG 4 cut(s) 564, 794, 1346, 1424
MunI CAATTG 1 cut(s) 1213
MvaI CCWGG 3 cut(s) 564, 1346, 1424
MvnI CGCG 2 cut(s) 291, 1199
MwoI GCNNNNNNNGC 2 cut(s) 573, 1370
NciI CCSGG 1 cut(s) 794
NcoI CCATGG 1 cut(s) 378
NdeII GATC 3 cut(s) 789, 821, 1179
NlaIV GGNNCC 6 cut(s) 172, 376, 766, 1026, 1061, 1079
NspI RCATGY 1 cut(s) 35
PceI AGGCCT 1 cut(s) 994
PdmI GAANNNNTTC 1 cut(s) 673
PfeI GAWTC 3 cut(s) 204, 275, 1013
PkrI GCNGC 3 cut(s) 293, 400, 933
PleI GAGTC 2 cut(s) 860, 1120
PpsI GAGTC 2 cut(s) 860, 1120
Ppu21I YACGTR 1 cut(s) 1282
PpuMI RGGWCCY 1 cut(s) 170
PshBI ATTAAT 2 cut(s) 783, 1304
Psp5II RGGWCCY 1 cut(s) 170
Psp6I CCWGG 3 cut(s) 562, 1344, 1422
PspFI CCCAGC 1 cut(s) 596
PspGI CCWGG 3 cut(s) 562, 1344, 1422
PspN4I GGNNCC 6 cut(s) 172, 376, 766, 1026, 1061, 1079
PspPI GGNCC 4 cut(s) 170, 764, 1188, 1239
PspPPI RGGWCCY 1 cut(s) 170
PsuI RGATCY 1 cut(s) 789
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 2 cut(s) 468, 1223
RsaNI GTAC 2 cut(s) 467, 1222
RseI CAYNNNNRTG 4 cut(s) 268, 914, 917, 1247
SatI GCNGC 3 cut(s) 292, 399, 932
Sau3AI GATC 3 cut(s) 789, 821, 1179
Sau96I GGNCC 4 cut(s) 170, 764, 1188, 1239
SchI GAGTC 2 cut(s) 860, 1120
ScrFI CCNGG 4 cut(s) 564, 794, 1346, 1424
SduI GDGCHC 2 cut(s) 1082, 1176
SexAI ACCWGGT 1 cut(s) 1422
SfaNI GCATC 5 cut(s) 229, 385, 502, 585, 918
SfcI CTRYAG 2 cut(s) 776, 1110
SinI GGWCC 2 cut(s) 170, 764
SmiMI CAYNNNNRTG 4 cut(s) 268, 914, 917, 1247
SmlI CTYRAG 2 cut(s) 57, 1083
SmoI CTYRAG 2 cut(s) 57, 1083
SnaBI TACGTA 1 cut(s) 1282
Sse9I AATT 5 cut(s) 10, 936, 1072, 1213, 1301
SseBI AGGCCT 1 cut(s) 994
SsiI CCGC 4 cut(s) 291, 478, 1134, 1199
SspMI CTAG 3 cut(s) 86, 282, 854
StuI AGGCCT 1 cut(s) 994
StyD4I CCNGG 4 cut(s) 562, 792, 1344, 1422
StyI CCWWGG 1 cut(s) 378
TaaI ACNGT 3 cut(s) 374, 916, 1226
TaiI ACGT 1 cut(s) 1284
TaqI TCGA 4 cut(s) 202, 207, 667, 734
TasI AATT 5 cut(s) 10, 936, 1072, 1213, 1301
TatI WGTACW 1 cut(s) 466
TauI GCSGC 1 cut(s) 294
TfiI GAWTC 3 cut(s) 204, 275, 1013
TscAI CASTG 4 cut(s) 139, 448, 921, 1231
TseI GCWGC 2 cut(s) 398, 931
TspDTI ATGAA 4 cut(s) 104, 592, 666, 729
TspGWI ACGGA 1 cut(s) 1382
TspRI CASTG 4 cut(s) 139, 448, 921, 1231
VpaK11BI GGWCC 2 cut(s) 170, 764
VspI ATTAAT 2 cut(s) 783, 1304
XbaI TCTAGA 1 cut(s) 853
XceI RCATGY 1 cut(s) 35
XmnI GAANNNNTTC 1 cut(s) 673
XspI CTAG 3 cut(s) 86, 282, 854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.