Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0000553

Physical Location & Seq

Genomic Coordinates Reverse (-)

7897915 .. 7900335

Gene Structure 2421 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT1G22370.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 930 bp

ATGGCAGATGAAAGTTCTTTGGACACAAAAATAAATTGGATACCATCGATGAAAAACCTAGGACTTAAAGACATCCCAAGCTTTATCCGTGCAACTAATACTGAAGACATAATGCTTAACTTTTTTGTCCATGAGGCTGACCGAGCCAAACGCGCTTCCGCTATCATTCTCAACACATTCGATAGTCTTGAGCATGATGTCGTCCGTTCTATTCAATCTATCATACCTCAAGTGTACACTATTGGACCGCTTCATCTATTTGTGAATCGGGATATCGACGAGGAAAGTGACATCGGACAGATAGGAACGAATATGTGGAGAGAGGAGATGGAGTGTTTGGATTGGCTTGATACTAAGTCTCCAAACAGTGTCGTTTATGTTAATTTCGGTAGCATAACAGTGATGAGTGCGAAACAACTCGTGGAGTTTGCTTGGGGTTTAGCAGCGACCAAAAAAGATTTTTTGTGGGTGATTAGGCCGGATTTAGTAGCCGGTGATGTGCCAATGCTTCCGCCGGACTTTCTAATAGAGACGGCTAACCGAAGGATGCTAGCGAGTTGGTGTCCTCAAGAAAAAGTTCTTTCTCATCCGGCAGTTGGAGGGTTCTTAACGCATAGTGGATGGAATTCGACTTTGGAGAGTCTCTCCGGTGGAGTTCCAATGGTGTGTTGGCCGTTCTTTGCGGAACAGCAAACAAATTGTAAATATTGTTGTGATGAATGGGAAGTGGGGATGGAGATCGGTGGAGATGTGAGGAGGGAGGAGGTTGAGGAGTTGGTTAGAGAACTCATGGACGGAGACAAAGGAAAGAAAATGAGGCAAAAGGCCGAAGAGTGGCAGCGCTTGGCTGAGGAAGCGACGAAGCCTATTTATGGTTCGTCGGAACTAAATTTTCAGATGGTCGTTGACAAGGTTCTTTTAGGGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0015020 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0050403 GO:0050502 GO:0080043 GO:0080044

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UDPGT

Protein Analysis

309

Amino Acids

35.04

Weight (kDa)

4.71

Isoelectric Point (pI)

39.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	38 - 270	2.1e-28	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000553)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca	FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica	MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica	Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis	pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis	RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata	RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora	Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii	Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa	Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha	Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana	Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	1 cut(s)	153
AciI	CCGC	4 cut(s)	159, 248, 512, 683
AcoI	YGGCCR	1 cut(s)	671
AcsI	RAATTY	2 cut(s)	625, 889
AcuI	CTGAAG	1 cut(s)	123
AfaI	GTAC	1 cut(s)	236
AfeI	AGCGCT	1 cut(s)	842
AfiI	CCNNNNNNNGG	3 cut(s)	596, 834, 872
AgsI	TTSAA	1 cut(s)	215
AjuI	GAANNNNNNNTTGG	2 cut(s)	617, 649
AluBI	AGCT	1 cut(s)	81
AluI	AGCT	1 cut(s)	81
Alw26I	GTCTC	4 cut(s)	363, 524, 647, 792
Aor51HI	AGCGCT	1 cut(s)	842
AoxI	GGCC	3 cut(s)	476, 671, 825
ApeKI	GCWGC	2 cut(s)	443, 838
ApoI	RAATTY	2 cut(s)	625, 889
Asp700I	GAANNNNTTC	1 cut(s)	576
AspA2I	CCTAGG	1 cut(s)	58
AspLEI	GCGC	2 cut(s)	155, 843
AspS9I	GGNCC	1 cut(s)	245
AsuHPI	GGTGA	2 cut(s)	481, 506
AsuNHI	GCTAGC	1 cut(s)	550
AvaII	GGWCC	1 cut(s)	245
AvrII	CCTAGG	1 cut(s)	58
BauI	CACGAG	1 cut(s)	419
BbsI	GAAGAC	1 cut(s)	111
BbvCI	CCTCAGC	1 cut(s)	849
BbvI	GCAGC	2 cut(s)	455, 850
BccI	CCATC	5 cut(s)	52, 322, 615, 727, 892
BceAI	ACGGC	2 cut(s)	549, 658
BciVI	GTATCC	1 cut(s)	33
BcoDI	GTCTC	4 cut(s)	363, 524, 647, 792
BfaI	CTAG	2 cut(s)	59, 551
BfoI	RGCGCY	1 cut(s)	844
BfuI	GTATCC	1 cut(s)	33
BisI	GCNGC	2 cut(s)	444, 839
BlnI	CCTAGG	1 cut(s)	58
BlsI	GCNGC	2 cut(s)	445, 840
Bme18I	GGWCC	1 cut(s)	245
BmgT120I	GGNCC	1 cut(s)	245
BmsI	GCATC	1 cut(s)	537
BmtI	GCTAGC	1 cut(s)	554
BpiI	GAAGAC	1 cut(s)	111
BplI	GAGNNNNNCTC	2 cut(s)	629, 661
Bpu10I	CCTNAGC	1 cut(s)	849
BpuEI	CTTGAG	3 cut(s)	209, 213, 552
Bsa29I	ATCGAT	1 cut(s)	47
BsaBI	GATNNNNATC	1 cut(s)	737
BsaJI	CCNNGG	1 cut(s)	58
BsaWI	WCCGGW	1 cut(s)	647
BsaXI	ACNNNNNCTCC	4 cut(s)	317, 343, 347, 373
Bsc4I	CCNNNNNNNGG	3 cut(s)	596, 834, 872
Bse118I	RCCGGY	1 cut(s)	491
Bse8I	GATNNNNATC	1 cut(s)	737
BseCI	ATCGAT	1 cut(s)	47
BseDI	CCNNGG	1 cut(s)	58
BseGI	GGATG	5 cut(s)	72, 552, 586, 626, 738
BseJI	GATNNNNATC	1 cut(s)	737
BseLI	CCNNNNNNNGG	3 cut(s)	596, 834, 872
BseMII	CTCAG	1 cut(s)	840
BseRI	GAGGAG	4 cut(s)	338, 769, 776, 785
BseXI	GCAGC	2 cut(s)	455, 850
Bsh1236I	CGCG	1 cut(s)	153
BshFI	GGCC	3 cut(s)	478, 673, 827
BshVI	ATCGAT	1 cut(s)	47
BsiSI	CCGG	5 cut(s)	479, 492, 515, 590, 648
BslI	CCNNNNNNNGG	3 cut(s)	596, 834, 872
BsmAI	GTCTC	4 cut(s)	363, 524, 647, 792
BsmBI	CGTCTC	1 cut(s)	524
BsnI	GGCC	3 cut(s)	478, 673, 827
Bsp1407I	TGTACA	1 cut(s)	234
Bsp143I	GATC	1 cut(s)	738
BspACI	CCGC	4 cut(s)	159, 248, 512, 683
BspANI	GGCC	3 cut(s)	478, 673, 827
BspCNI	CTCAG	1 cut(s)	841
BspDI	ATCGAT	1 cut(s)	47
BspFNI	CGCG	1 cut(s)	153
BspOI	GCTAGC	1 cut(s)	554
BsrFI	RCCGGY	1 cut(s)	491
BsrGI	TGTACA	1 cut(s)	234
BssAI	RCCGGY	1 cut(s)	491
BssECI	CCNNGG	1 cut(s)	58
BssMI	GATC	1 cut(s)	738
BssSI	CACGAG	1 cut(s)	419
BssT1I	CCWWGG	1 cut(s)	58
Bst2BI	CACGAG	1 cut(s)	419
Bst4CI	ACNGT	2 cut(s)	368, 400
Bst6I	CTCTTC	1 cut(s)	825
BstAUI	TGTACA	1 cut(s)	234
BstC8I	GCNNGC	1 cut(s)	552
BstDEI	CTNAG	2 cut(s)	354, 849
BstF5I	GGATG	5 cut(s)	72, 552, 586, 626, 738
BstFNI	CGCG	1 cut(s)	153
BstH2I	RGCGCY	1 cut(s)	844
BstHHI	GCGC	2 cut(s)	155, 843
BstKTI	GATC	1 cut(s)	741
BstMAI	GTCTC	4 cut(s)	363, 524, 647, 792
BstMBI	GATC	1 cut(s)	738
BstMWI	GCNNNNNNNGC	3 cut(s)	143, 152, 854
BstUI	CGCG	1 cut(s)	153
BstV1I	GCAGC	2 cut(s)	455, 850
BstV2I	GAAGAC	1 cut(s)	111
Bsu15I	ATCGAT	1 cut(s)	47
BsuI	GTATCC	1 cut(s)	33
BsuRI	GGCC	3 cut(s)	478, 673, 827
BsuTUI	ATCGAT	1 cut(s)	47
BtsCI	GGATG	5 cut(s)	72, 552, 586, 626, 738
BtsIMutI	CAGTG	2 cut(s)	373, 405
Cac8I	GCNNGC	1 cut(s)	552
CfoI	GCGC	2 cut(s)	155, 843
Cfr10I	RCCGGY	1 cut(s)	491
Cfr13I	GGNCC	1 cut(s)	245
ClaI	ATCGAT	1 cut(s)	47
Csp6I	GTAC	1 cut(s)	235
CviAII	CATG	3 cut(s)	131, 194, 790
CviQI	GTAC	1 cut(s)	235
DdeI	CTNAG	2 cut(s)	354, 849
DpnI	GATC	1 cut(s)	740
DpnII	GATC	1 cut(s)	738
EaeI	YGGCCR	1 cut(s)	671
Eam1104I	CTCTTC	1 cut(s)	825
EarI	CTCTTC	1 cut(s)	825
EciI	GGCGGA	1 cut(s)	501
Eco130I	CCWWGG	1 cut(s)	58
Eco32I	GATATC	1 cut(s)	274
Eco47I	GGWCC	1 cut(s)	245
Eco47III	AGCGCT	1 cut(s)	842
Eco57I	CTGAAG	1 cut(s)	123
EcoRI	GAATTC	1 cut(s)	625
EcoRV	GATATC	1 cut(s)	274
EcoT14I	CCWWGG	1 cut(s)	58
ErhI	CCWWGG	1 cut(s)	58
Esp3I	CGTCTC	1 cut(s)	524
FaeI	CATG	3 cut(s)	134, 197, 793
FatI	CATG	3 cut(s)	130, 193, 789
Fnu4HI	GCNGC	2 cut(s)	444, 839
FokI	GGATG	5 cut(s)	59, 559, 573, 633, 745
Fsp4HI	GCNGC	2 cut(s)	444, 839
FspBI	CTAG	2 cut(s)	59, 551
GlaI	GCGC	2 cut(s)	154, 842
GluI	GCNGC	2 cut(s)	444, 839
HaeII	RGCGCY	1 cut(s)	844
HaeIII	GGCC	3 cut(s)	478, 673, 827
HapII	CCGG	5 cut(s)	479, 492, 515, 590, 648
HhaI	GCGC	2 cut(s)	155, 843
Hin1II	CATG	3 cut(s)	134, 197, 793
Hin6I	GCGC	2 cut(s)	153, 841
HinP1I	GCGC	2 cut(s)	153, 841
HincII	GTYRAC	1 cut(s)	907
HindII	GTYRAC	1 cut(s)	907
HindIII	AAGCTT	1 cut(s)	79
HinfI	GANTC	2 cut(s)	265, 640
HpaII	CCGG	5 cut(s)	479, 492, 515, 590, 648
HphI	GGTGA	2 cut(s)	481, 506
Hpy166II	GTNNAC	3 cut(s)	235, 237, 907
Hpy188I	TCNGA	3 cut(s)	296, 883, 897
Hpy188III	TCNNGA	3 cut(s)	188, 269, 569
Hpy8I	GTNNAC	3 cut(s)	235, 237, 907
Hpy99I	CGWCG	3 cut(s)	281, 862, 883
HpyAV	CCTTC	1 cut(s)	537
HpyCH4III	ACNGT	2 cut(s)	368, 400
HpyCH4V	TGCA	1 cut(s)	92
HpyF10VI	GCNNNNNNNGC	3 cut(s)	143, 152, 854
HpyF3I	CTNAG	2 cut(s)	354, 849
Hsp92II	CATG	3 cut(s)	134, 197, 793
HspAI	GCGC	2 cut(s)	153, 841
Kzo9I	GATC	1 cut(s)	738
LpnPI	CCDG	5 cut(s)	492, 505, 528, 603, 661
Lsp1109I	GCAGC	2 cut(s)	455, 850
LweI	GCATC	1 cut(s)	537
MaeI	CTAG	2 cut(s)	59, 551
MaeIII	GTNAC	1 cut(s)	287
MalI	GATC	1 cut(s)	740
MboI	GATC	1 cut(s)	738
MboII	GAAGA	2 cut(s)	116, 842
MluCI	AATT	5 cut(s)	34, 382, 625, 697, 889
MlyI	GAGTC	1 cut(s)	649
MmeI	TCCRAC	2 cut(s)	577, 861
MroXI	GAANNNNTTC	1 cut(s)	576
MseI	TTAA	4 cut(s)	66, 117, 381, 608
MslI	CAYNNNNRTG	1 cut(s)	398
MspI	CCGG	5 cut(s)	479, 492, 515, 590, 648
MvnI	CGCG	1 cut(s)	153
MwoI	GCNNNNNNNGC	3 cut(s)	143, 152, 854
NdeII	GATC	1 cut(s)	738
NheI	GCTAGC	1 cut(s)	550
NlaIII	CATG	3 cut(s)	134, 197, 793
NmuCI	GTSAC	1 cut(s)	287
PdmI	GAANNNNTTC	1 cut(s)	576
PfeI	GAWTC	1 cut(s)	265
PkrI	GCNGC	2 cut(s)	445, 840
PleI	GAGTC	1 cut(s)	648
PpsI	GAGTC	1 cut(s)	648
PspPI	GGNCC	1 cut(s)	245
RsaI	GTAC	1 cut(s)	236
RsaNI	GTAC	1 cut(s)	235
RseI	CAYNNNNRTG	1 cut(s)	398
SaqAI	TTAA	4 cut(s)	66, 117, 381, 608
SatI	GCNGC	2 cut(s)	444, 839
Sau3AI	GATC	1 cut(s)	738
Sau96I	GGNCC	1 cut(s)	245
SchI	GAGTC	1 cut(s)	649
SetI	ASST	5 cut(s)	60, 83, 229, 768, 915
SfaNI	GCATC	1 cut(s)	537
SinI	GGWCC	1 cut(s)	245
SmiMI	CAYNNNNRTG	1 cut(s)	398
SmlI	CTYRAG	3 cut(s)	188, 228, 567
SmoI	CTYRAG	3 cut(s)	188, 228, 567
Sse9I	AATT	5 cut(s)	34, 382, 625, 697, 889
SsiI	CCGC	4 cut(s)	159, 248, 512, 683
SspI	AATATT	1 cut(s)	707
SspMI	CTAG	2 cut(s)	59, 551
StyI	CCWWGG	1 cut(s)	58
TaaI	ACNGT	2 cut(s)	368, 400
TaqI	TCGA	4 cut(s)	47, 180, 276, 629
TaqII	GACCGA	1 cut(s)	156
TasI	AATT	5 cut(s)	34, 382, 625, 697, 889
TatI	WGTACW	1 cut(s)	234
TfiI	GAWTC	1 cut(s)	265
Tru1I	TTAA	4 cut(s)	66, 117, 381, 608
Tru9I	TTAA	4 cut(s)	66, 117, 381, 608
TscAI	CASTG	2 cut(s)	373, 405
TseFI	GTSAC	1 cut(s)	287
TseI	GCWGC	2 cut(s)	443, 838
Tsp45I	GTSAC	1 cut(s)	287
TspDTI	ATGAA	4 cut(s)	24, 65, 242, 732
TspGWI	ACGGA	3 cut(s)	77, 194, 810
TspRI	CASTG	2 cut(s)	373, 405
VpaK11BI	GGWCC	1 cut(s)	245
XapI	RAATTY	2 cut(s)	625, 889
XcmI	CCANNNNNNNNNTGG	1 cut(s)	666
XmaJI	CCTAGG	1 cut(s)	58
XmnI	GAANNNNTTC	1 cut(s)	576
XspI	CTAG	2 cut(s)	59, 551

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.