FvH4_5g37020

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
27106351 .. 27114936
8586 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37020.t4

Sequence Viewer

Length: 1425 bp
ATGGGTTCCAACGCCTTGGAGAAGCCACATGCAGTTTGTATACCATACCCTGCTCAAGGTCACATAAACCCGATGCTAAAATTAGCTAAAATCCTTCACTACAGAGGCTTTCATATAACCTTTGTCAACACAGAGTACAACCATGAGCGCTTGCTTAGATCCCGAGGTCCCAACTCTCTCGATGGCCTGCCCTCGTTTAGGTTCAAATCGATTCCCGATGGCCTTCCTCCTACTGATGCCAATGTCACCCAAGACATACCAGCCCTATGTGGTTCCATTAGAAATAACTTTTTATCACCCTTCAGAAGCCTTCTTTCAGAACTCAATTCTTCGTCAAATTCCCCTCCTGTTACTTGCATAATTTCTGATTTTGGCACGACCTTCACTCTTGATGCAGCCCATGAACTTGGCCTTCCAGTAGTCCTCTTCCAGACAGCGAGTGCTTGTGCATTAATGTGCTACCTTCACTATGCTCATCTCATTGAAAAGGGTATTGTTCCACTTAAAGAGGCCAGTTATTTAACAAATGGCTACTTGGACACTGTAATTGACTGGTTACCTGGCTTGGGCAGTATACGTTTGAGGGACATGCCAACCTTCATTAGAACCACAGACCCAGATGATGTCATGCTGAGTTATCTTCTGGATGTGATAGAACAAGCTCAAAGAGCGTCTGCTATCATTATTAACACATTTGATGCCTTGGAGCATAAAGTTTTAGATGCATTTTCAAGTTTGCTACCACCTGTGTATTCCATTGGACCTCTTCATCAACAACTCAGTCATATCCAAGAAGATGATGACTCAAAGACGATCGGGGCAAATCTTTGGAAAGAAGAACCAGAGTGTCTTGATTGGCTTGAGTCAAAAGTACCAAATTCTGTGGTTTATGTAAACTTTGGAAGTATCACAGTCATGACAGACGAGCAGCTGATTGAGTTTGCTTGGGGTCTCGCAAATAGTAGCATGACCTTTTTGTGGGTGATTAGGCCTGATCTTGTTGCTGGGAAATCAGCTGTGGTTCCACCCGAGTTTGTAGAAGAGACCAAGGGAAGGAGTTGGTTGGCGAGTTGGTGCCCTCAAGAACAAGTTCTGAATCATCCAGCTATAGGAGGTTTCCTGACACATTGTGGATGGAACTCTACGGTTGAAAGTCTGTGTGGTGGAGTTCCCATGATCTGTTGGCCCTTCTTTGCTGACCAACAAACAAATTGTAGGTTCTGTTGCAAAGAGTGGGGTGTAGCCATGCAGATAGAGGGTGATGTTAAAAGGAATTATATAGAAGACCTTGTGAGAAAATTAATGGGAGGACAGGAAGGCAAACAAATGAGGAAGAAATCCTTGGAATGGAAGAAGTTGGCAGAGGAAGCTATTACTGCTCCCAATGGTACGTTCATCATTCTTGAATTTGAACAAGATGGTTAA

Protein Analysis

475

Amino Acids

52.86

Weight (kDa)

5.16

Isoelectric Point (pI)

48.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 132 - 274 9e-27 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1074
AccI GTMKAC 2 cut(s) 40, 574
AclWI GGATC 1 cut(s) 153
AcsI RAATTY 3 cut(s) 337, 877, 1406
AcuI CTGAAG 1 cut(s) 286
AdeI CACNNNGTG 1 cut(s) 1130
AfaI GTAC 3 cut(s) 137, 873, 1390
AfeI AGCGCT 1 cut(s) 149
AfiI CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
AgsI TTSAA 6 cut(s) 205, 485, 732, 1151, 1406, 1412
AjnI CCWGG 1 cut(s) 559
AjuI GAANNNNNNNTTGG 4 cut(s) 1325, 1357, 1376, 1408
AluBI AGCT 6 cut(s) 86, 662, 931, 1016, 1106, 1370
AluI AGCT 6 cut(s) 86, 662, 931, 1016, 1106, 1370
Alw26I GTCTC 2 cut(s) 956, 1037
AlwI GGATC 1 cut(s) 153
Ama87I CYCGRG 2 cut(s) 162, 1028
Aor51HI AGCGCT 1 cut(s) 149
AoxI GGCC 6 cut(s) 184, 220, 409, 510, 989, 1184
ApeKI GCWGC 2 cut(s) 395, 928
ApoI RAATTY 3 cut(s) 337, 877, 1406
AseI ATTAAT 2 cut(s) 452, 1301
Asp700I GAANNNNTTC 1 cut(s) 1089
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 3 cut(s) 167, 761, 1185
AsuHPI GGTGA 4 cut(s) 238, 288, 994, 1271
AvaI CYCGRG 2 cut(s) 162, 1028
AvaII GGWCC 2 cut(s) 167, 761
BaeGI GKGCMC 1 cut(s) 1079
BanI GGYRCC 1 cut(s) 1074
BbsI GAAGAC 1 cut(s) 1290
BbvI GCAGC 2 cut(s) 407, 940
BccI CCATC 4 cut(s) 176, 212, 1128, 1412
BciT130I CCWGG 1 cut(s) 561
BcoDI GTCTC 2 cut(s) 956, 1037
BfmI CTRYAG 2 cut(s) 100, 1107
BfoI RGCGCY 1 cut(s) 151
BisI GCNGC 2 cut(s) 396, 929
BlsI GCNGC 2 cut(s) 397, 930
Bme1390I CCNGG 1 cut(s) 561
Bme18I GGWCC 2 cut(s) 167, 761
BmeT110I CYCGRG 2 cut(s) 162, 1028
BmgT120I GGNCC 3 cut(s) 167, 761, 1185
BmiI GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
BmrFI CCNGG 1 cut(s) 561
BmsI GCATC 5 cut(s) 63, 226, 382, 688, 712
BpiI GAAGAC 1 cut(s) 1290
BpuEI CTTGAG 3 cut(s) 39, 881, 1065
Bsa29I ATCGAT 1 cut(s) 209
BsaI GGTCTC 2 cut(s) 956, 1037
BsaJI CCNNGG 5 cut(s) 15, 163, 702, 1047, 1341
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
Bse1I ACTGG 3 cut(s) 416, 513, 557
BseBI CCWGG 1 cut(s) 561
BseCI ATCGAT 1 cut(s) 209
BseDI CCNNGG 5 cut(s) 15, 163, 702, 1047, 1341
BseGI GGATG 3 cut(s) 652, 1099, 1139
BseLI CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
BseMII CTCAG 2 cut(s) 623, 793
BseNI ACTGG 3 cut(s) 416, 513, 557
BseSI GKGCMC 1 cut(s) 1079
BseXI GCAGC 2 cut(s) 407, 940
BseYI CCCAGC 1 cut(s) 1004
Bsh1285I CGRYCG 1 cut(s) 816
BshFI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
BshNI GGYRCC 1 cut(s) 1074
BshVI ATCGAT 1 cut(s) 209
BsiEI CGRYCG 1 cut(s) 816
BsiHKCI CYCGRG 2 cut(s) 162, 1028
BslFI GGGAC 2 cut(s) 153, 599
BslI CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
BsmAI GTCTC 2 cut(s) 956, 1037
BsmFI GGGAC 2 cut(s) 153, 599
BsnI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
Bso31I GGTCTC 2 cut(s) 956, 1037
BsoBI CYCGRG 2 cut(s) 162, 1028
Bsp1286I GDGCHC 1 cut(s) 1079
Bsp143I GATC 4 cut(s) 158, 813, 994, 1176
BspANI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
BspCNI CTCAG 2 cut(s) 624, 792
BspDI ATCGAT 1 cut(s) 209
BspHI TCATGA 1 cut(s) 915
BspLI GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
BspPI GGATC 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 1074
BspTNI GGTCTC 2 cut(s) 956, 1037
BsrI ACTGG 3 cut(s) 416, 513, 557
BssECI CCNNGG 5 cut(s) 15, 163, 702, 1047, 1341
BssMI GATC 4 cut(s) 158, 813, 994, 1176
BssNAI GTATAC 2 cut(s) 41, 575
BssT1I CCWWGG 4 cut(s) 15, 702, 1047, 1341
Bst1107I GTATAC 2 cut(s) 41, 575
Bst2UI CCWGG 1 cut(s) 561
Bst4CI ACNGT 3 cut(s) 544, 913, 1147
Bst6I CTCTTC 3 cut(s) 431, 771, 1035
BstC8I GCNNGC 2 cut(s) 152, 188
BstDEI CTNAG 3 cut(s) 155, 632, 779
BstEII GGTNACC 1 cut(s) 555
BstENI CCTNNNNNAGG 2 cut(s) 54, 196
BstF5I GGATG 3 cut(s) 652, 1099, 1139
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 4 cut(s) 161, 816, 997, 1179
BstMAI GTCTC 2 cut(s) 956, 1037
BstMBI GATC 4 cut(s) 158, 813, 994, 1176
BstMCI CGRYCG 1 cut(s) 816
BstMWI GCNNNNNNNGC 3 cut(s) 668, 1367, 1376
BstNI CCWGG 1 cut(s) 561
BstNSI RCATGY 2 cut(s) 32, 592
BstPI GGTNACC 1 cut(s) 555
BstSCI CCNGG 1 cut(s) 559
BstSFI CTRYAG 2 cut(s) 100, 1107
BstSLI GKGCMC 1 cut(s) 1079
BstV1I GCAGC 2 cut(s) 407, 940
BstV2I GAAGAC 1 cut(s) 1290
BstX2I RGATCY 1 cut(s) 158
BstXI CCANNNNNNTGG 2 cut(s) 16, 407
BstYI RGATCY 1 cut(s) 158
BstZ17I GTATAC 2 cut(s) 41, 575
Bsu15I ATCGAT 1 cut(s) 209
BsuRI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
BsuTUI ATCGAT 1 cut(s) 209
BtsCI GGATG 3 cut(s) 652, 1099, 1139
BtsIMutI CAGTG 1 cut(s) 540
Cac8I GCNNGC 2 cut(s) 152, 188
CciI TCATGA 1 cut(s) 915
CfoI GCGC 1 cut(s) 150
Cfr13I GGNCC 3 cut(s) 167, 761, 1185
ClaI ATCGAT 1 cut(s) 209
CseI GACGC 1 cut(s) 660
Csp6I GTAC 3 cut(s) 136, 872, 1389
CspCI CAANNNNNGTGG 2 cut(s) 864, 899
CviAII CATG 9 cut(s) 29, 143, 401, 589, 628, 916, 967, 1174, 1246
CviQI GTAC 3 cut(s) 136, 872, 1389
DdeI CTNAG 3 cut(s) 155, 632, 779
DpnI GATC 4 cut(s) 160, 815, 996, 1178
DpnII GATC 4 cut(s) 158, 813, 994, 1176
DraIII CACNNNGTG 1 cut(s) 1130
Eam1104I CTCTTC 3 cut(s) 431, 771, 1035
EarI CTCTTC 3 cut(s) 431, 771, 1035
Eco130I CCWWGG 4 cut(s) 15, 702, 1047, 1341
Eco147I AGGCCT 1 cut(s) 991
Eco31I GGTCTC 2 cut(s) 956, 1037
Eco47I GGWCC 2 cut(s) 167, 761
Eco47III AGCGCT 1 cut(s) 149
Eco57I CTGAAG 1 cut(s) 286
Eco88I CYCGRG 2 cut(s) 162, 1028
Eco91I GGTNACC 1 cut(s) 555
EcoNI CCTNNNNNAGG 2 cut(s) 54, 196
EcoO109I RGGNCCY 1 cut(s) 167
EcoO65I GGTNACC 1 cut(s) 555
EcoRII CCWGG 1 cut(s) 559
EcoT14I CCWWGG 4 cut(s) 15, 702, 1047, 1341
EcoT22I ATGCAT 1 cut(s) 727
ErhI CCWWGG 4 cut(s) 15, 702, 1047, 1341
FaeI CATG 9 cut(s) 32, 146, 404, 592, 631, 919, 970, 1177, 1249
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 2 cut(s) 153, 599
FatI CATG 9 cut(s) 28, 142, 400, 588, 627, 915, 966, 1173, 1245
FblI GTMKAC 2 cut(s) 40, 574
Fnu4HI GCNGC 2 cut(s) 396, 929
FokI GGATG 3 cut(s) 659, 1086, 1146
Fsp4HI GCNGC 2 cut(s) 396, 929
GlaI GCGC 1 cut(s) 149
GluI GCNGC 2 cut(s) 396, 929
GsaI CCCAGC 1 cut(s) 1008
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
HgaI GACGC 1 cut(s) 660
HhaI GCGC 1 cut(s) 150
Hin1II CATG 9 cut(s) 32, 146, 404, 592, 631, 919, 970, 1177, 1249
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HincII GTYRAC 1 cut(s) 127
HindII GTYRAC 1 cut(s) 127
HinfI GANTC 4 cut(s) 211, 803, 863, 1096
HphI GGTGA 4 cut(s) 238, 288, 994, 1271
Hpy166II GTNNAC 4 cut(s) 41, 127, 575, 895
Hpy188I TCNGA 4 cut(s) 305, 319, 367, 1095
Hpy8I GTNNAC 4 cut(s) 41, 127, 575, 895
HpyCH4III ACNGT 3 cut(s) 544, 913, 1147
HpyCH4IV ACGT 2 cut(s) 577, 1391
HpyCH4V TGCA 7 cut(s) 32, 357, 395, 449, 725, 1227, 1249
HpyF10VI GCNNNNNNNGC 3 cut(s) 668, 1367, 1376
HpyF3I CTNAG 3 cut(s) 155, 632, 779
HpySE526I ACGT 2 cut(s) 577, 1391
Hsp92II CATG 9 cut(s) 32, 146, 404, 592, 631, 919, 970, 1177, 1249
HspAI GCGC 1 cut(s) 148
Kzo9I GATC 4 cut(s) 158, 813, 994, 1176
LmnI GCTCC 2 cut(s) 706, 1384
Lsp1109I GCAGC 2 cut(s) 407, 940
LweI GCATC 5 cut(s) 63, 226, 382, 688, 712
MaeII ACGT 2 cut(s) 577, 1391
MaeIII GTNAC 4 cut(s) 59, 244, 349, 555
MalI GATC 4 cut(s) 160, 815, 996, 1178
MboI GATC 4 cut(s) 158, 813, 994, 1176
MflI RGATCY 1 cut(s) 158
MhlI GDGCHC 1 cut(s) 1079
MlyI GAGTC 2 cut(s) 797, 872
MmeI TCCRAC 1 cut(s) 33
Mph1103I ATGCAT 1 cut(s) 727
MroXI GAANNNNTTC 1 cut(s) 1089
MseI TTAA 7 cut(s) 452, 504, 521, 687, 1266, 1301, 1423
MslI CAYNNNNRTG 2 cut(s) 454, 914
MspA1I CMGCKG 2 cut(s) 931, 1016
MspR9I CCNGG 1 cut(s) 561
MvaI CCWGG 1 cut(s) 561
MwoI GCNNNNNNNGC 3 cut(s) 668, 1367, 1376
NdeII GATC 4 cut(s) 158, 813, 994, 1176
NlaIII CATG 9 cut(s) 32, 146, 404, 592, 631, 919, 970, 1177, 1249
NlaIV GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
NmuCI GTSAC 2 cut(s) 59, 244
NsiI ATGCAT 1 cut(s) 727
NspI RCATGY 2 cut(s) 32, 592
PagI TCATGA 1 cut(s) 915
PceI AGGCCT 1 cut(s) 991
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 2 cut(s) 211, 1096
PkrI GCNGC 2 cut(s) 397, 930
Ple19I CGATCG 1 cut(s) 816
PleI GAGTC 2 cut(s) 797, 871
PpsI GAGTC 2 cut(s) 797, 871
PpuMI RGGWCCY 1 cut(s) 167
PshBI ATTAAT 2 cut(s) 452, 1301
Psp5II RGGWCCY 1 cut(s) 167
Psp6I CCWGG 1 cut(s) 559
PspEI GGTNACC 1 cut(s) 555
PspFI CCCAGC 1 cut(s) 1004
PspGI CCWGG 1 cut(s) 559
PspN4I GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
PspPI GGNCC 3 cut(s) 167, 761, 1185
PspPPI RGGWCCY 1 cut(s) 167
PsuI RGATCY 1 cut(s) 158
PvuI CGATCG 1 cut(s) 816
PvuII CAGCTG 2 cut(s) 931, 1016
RsaI GTAC 3 cut(s) 137, 873, 1390
RsaNI GTAC 3 cut(s) 136, 872, 1389
RseI CAYNNNNRTG 2 cut(s) 454, 914
SaqAI TTAA 7 cut(s) 452, 504, 521, 687, 1266, 1301, 1423
SatI GCNGC 2 cut(s) 396, 929
Sau3AI GATC 4 cut(s) 158, 813, 994, 1176
Sau96I GGNCC 3 cut(s) 167, 761, 1185
SchI GAGTC 2 cut(s) 797, 872
ScrFI CCNGG 1 cut(s) 561
SduI GDGCHC 1 cut(s) 1079
SfaNI GCATC 5 cut(s) 63, 226, 382, 688, 712
SfcI CTRYAG 2 cut(s) 100, 1107
SinI GGWCC 2 cut(s) 167, 761
SmiMI CAYNNNNRTG 2 cut(s) 454, 914
SmlI CTYRAG 3 cut(s) 54, 860, 1080
SmoI CTYRAG 3 cut(s) 54, 860, 1080
SseBI AGGCCT 1 cut(s) 991
StuI AGGCCT 1 cut(s) 991
StyD4I CCNGG 1 cut(s) 559
StyI CCWWGG 4 cut(s) 15, 702, 1047, 1341
TaaI ACNGT 3 cut(s) 544, 913, 1147
TaiI ACGT 2 cut(s) 580, 1394
TaqI TCGA 2 cut(s) 180, 209
TatI WGTACW 1 cut(s) 135
TfiI GAWTC 2 cut(s) 211, 1096
Tru1I TTAA 7 cut(s) 452, 504, 521, 687, 1266, 1301, 1423
Tru9I TTAA 7 cut(s) 452, 504, 521, 687, 1266, 1301, 1423
TscAI CASTG 1 cut(s) 547
TseFI GTSAC 2 cut(s) 59, 244
TseI GCWGC 2 cut(s) 395, 928
Tsp45I GTSAC 2 cut(s) 59, 244
TspDTI ATGAA 5 cut(s) 101, 417, 589, 758, 1384
TspRI CASTG 1 cut(s) 547
VpaK11BI GGWCC 2 cut(s) 167, 761
VspI ATTAAT 2 cut(s) 452, 1301
XagI CCTNNNNNAGG 2 cut(s) 54, 196
XapI RAATTY 3 cut(s) 337, 877, 1406
XceI RCATGY 2 cut(s) 32, 592
XmiI GTMKAC 2 cut(s) 40, 574
XmnI GAANNNNTTC 1 cut(s) 1089
Zsp2I ATGCAT 1 cut(s) 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.