RLG00000000837

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
6317337 .. 6318868
1532 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000000837

Sequence Viewer

Length: 1443 bp
ATGGCAGAAAAGCCACATGCAGTTTGCATGCCACACCCGGCTCAAGGTCACATAAACCCAATGCTCAAACTAGCCAAACTGCTTCACTACAAAGGCTTTCATATAACCTTTGTCAACACAGAGTACAACCATAGACGCTGGCTTAAATCCCGAGGCCCTAACTCCGCTGATGGCCTCCCTTCCTTTCAATTTGAAACAATTCCAGATGGCCTCCCTCCAACTGATGCAAATGCTACACAACACATACCATCCTTATGTGAATCCACAAAGAAAAACTGCTTAGCTCCCTTCAGAGAACTTCTTTCAAAGCTGAATTCTTCTTCAAACAATAATATCCCTCAGGTAACTTGCATAGTGGCTGATGGTGTCATGAGCTACAGTTTAGATGCTGGTGAAGAACTGGGGATTCCGGTAGTTCTTTTCTGGACACCAAGTGCTTCTGGCTTCATGGGCTACCTTCAGTATCACCGACTCATCCAAGAGGGTCTCACTCCTCTCAAAGATTCCAGCTATTTGACAAACGGGTATTTGAATACTGTAATAGATTGGATACCAGGCATGAGAGGTATCCGTTTAAAGGACATCCCGAGTTTCATTAGGACAACAGACCCAGATGACATCATGCTGAATTTTCTTGTATATGAGACTGAACGATCTCAAAGAGCTTCTGCTATTATCTTGAACACGTTCTACGACTTAGAGCATGAAGTTCTTGATGCACTGTCAAGTCTGCTACCACCCATTTACACCATTGGACCTGTACATCTACAACTTCATCAGATCCCAGCAGATAGCGATTTGAAGTTGATAGAATCAAACCTATGGATAGAGGAAGCAGAGTGTCTTGACTGGCTTCACTTAAAAGAACAAAATTCTGTGGTATATGTCAATTTCGGAAGCATTACAGTCATGACACCCGAGCAGCTAATTGAGTTTGCTTGGGGACTTGCAAACAGCAACAAGCCATTTCTCTGGGTCATAAGGCCTGACCTTGTTGCTGGGGAATCAGCTGTGCTTCCACCAGGGTTTCTAGAAGAAATTAAAGAAAGGGGCCTATTAGCAAGTTGGTGCCCCCAAGAACAAGTTTTGAGCCACCCAGCTATAGGAGGCTTCTTGACACATGGTGGATGGAACTCTACTATTGAAAGTGTGAGTGGTGGAGTGCCCATGATTTGTTGGCCTTTCTTTGCTGAGCAACAAATGAATTGTATGTACTGTTGCAAAGAATGGGGCATAGGCATGGAGATAGAGGGTGAAGTCAAGAGAAATTACATAGAAGGGCTTGTGAGAAAGTTGATGGAGGGAGAGGAAGGCAATGAGATGAGGAAGAAAGCCAAGGAATTGAAGAGGTTGGCAGAGGAGGCCTCTAGTGGTCCTAATGGGTTATCATTTTTGAATTTGGAGAAGCTGGTTAACCAGGTGCTTCAGTCTCCCAGAATTTAA

Protein Analysis

481

Amino Acids

53.85

Weight (kDa)

5.32

Isoelectric Point (pI)

50.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 8 - 127 5.8e-08 Glycosyltransferase, N-terminal domain
UDPGT PF00201 284 - 436 5.9e-27 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1068
AciI CCGC 1 cut(s) 165
AclWI GGATC 1 cut(s) 775
AcsI RAATTY 5 cut(s) 313, 628, 871, 1396, 1437
AcuI CTGAAG 3 cut(s) 274, 443, 1409
AdeI CACNNNGTG 2 cut(s) 434, 1124
AfaI GTAC 3 cut(s) 125, 762, 1214
AfiI CCNNNNNNNGG 3 cut(s) 44, 577, 1103
AflIII ACRYGT 1 cut(s) 684
AjnI CCWGG 3 cut(s) 553, 1021, 1416
AluBI AGCT 9 cut(s) 284, 310, 375, 510, 665, 925, 1010, 1100, 1408
AluI AGCT 9 cut(s) 284, 310, 375, 510, 665, 925, 1010, 1100, 1408
Alw26I GTCTC 3 cut(s) 491, 638, 1434
AlwI GGATC 1 cut(s) 775
Ama87I CYCGRG 3 cut(s) 150, 586, 917
AoxI GGCC 7 cut(s) 154, 172, 208, 983, 1051, 1178, 1362
ApeKI GCWGC 1 cut(s) 922
ApoI RAATTY 5 cut(s) 313, 628, 871, 1396, 1437
Asp700I GAANNNNTTC 2 cut(s) 198, 686
AspS9I GGNCC 4 cut(s) 155, 755, 1051, 1373
AsuC2I CCSGG 1 cut(s) 38
AsuHPI GGTGA 3 cut(s) 404, 458, 1265
AvaI CYCGRG 3 cut(s) 150, 586, 917
AvaII GGWCC 2 cut(s) 755, 1373
AxyI CCTNAGG 1 cut(s) 339
BaeGI GKGCMC 2 cut(s) 1073, 1167
BanI GGYRCC 1 cut(s) 1068
BbvI GCAGC 1 cut(s) 934
BccI CCATC 6 cut(s) 164, 200, 256, 356, 1122, 1291
BciT130I CCWGG 3 cut(s) 555, 1023, 1418
BciVI GTATCC 2 cut(s) 543, 578
BcnI CCSGG 1 cut(s) 38
BcoDI GTCTC 3 cut(s) 491, 638, 1434
BfaI CTAG 3 cut(s) 71, 1031, 1368
BfmI CTRYAG 2 cut(s) 376, 1101
BfuI GTATCC 2 cut(s) 543, 578
BisI GCNGC 1 cut(s) 923
BlpI GCTNAGC 2 cut(s) 280, 1191
BlsI GCNGC 1 cut(s) 924
Bme1390I CCNGG 4 cut(s) 38, 555, 1023, 1418
Bme18I GGWCC 2 cut(s) 755, 1373
BmeT110I CYCGRG 3 cut(s) 150, 586, 917
BmgT120I GGNCC 4 cut(s) 155, 755, 1051, 1373
BmiI GGNNCC 2 cut(s) 1052, 1070
BmrFI CCNGG 4 cut(s) 38, 555, 1023, 1418
BmrI ACTGGG 1 cut(s) 410
BmsI GCATC 3 cut(s) 214, 376, 706
BmuI ACTGGG 1 cut(s) 410
BplI GAGNNNNNCTC 2 cut(s) 1349, 1381
Bpu1102I GCTNAGC 2 cut(s) 280, 1191
BpuEI CTTGAG 1 cut(s) 27
BpuMI CCSGG 1 cut(s) 38
BsaI GGTCTC 1 cut(s) 491
BsaJI CCNNGG 3 cut(s) 151, 1022, 1335
BsaWI WCCGGW 1 cut(s) 409
Bsc4I CCNNNNNNNGG 3 cut(s) 44, 577, 1103
Bse1I ACTGG 2 cut(s) 405, 854
Bse21I CCTNAGG 1 cut(s) 339
Bse3DI GCAATG 1 cut(s) 1321
BseBI CCWGG 3 cut(s) 555, 1023, 1418
BseDI CCNNGG 3 cut(s) 151, 1022, 1335
BseGI GGATG 4 cut(s) 248, 474, 582, 1133
BseLI CCNNNNNNNGG 3 cut(s) 44, 577, 1103
BseMI GCAATG 1 cut(s) 1321
BseMII CTCAG 2 cut(s) 353, 1182
BseNI ACTGG 2 cut(s) 405, 854
BseRI GAGGAG 2 cut(s) 483, 1373
BseSI GKGCMC 2 cut(s) 1073, 1167
BseXI GCAGC 1 cut(s) 934
BseYI CCCAGC 3 cut(s) 784, 998, 1096
BshFI GGCC 7 cut(s) 156, 174, 210, 985, 1053, 1180, 1364
BshNI GGYRCC 1 cut(s) 1068
BsiHKCI CYCGRG 3 cut(s) 150, 586, 917
BsiSI CCGG 2 cut(s) 38, 410
BslFI GGGAC 1 cut(s) 957
BslI CCNNNNNNNGG 3 cut(s) 44, 577, 1103
BsmAI GTCTC 3 cut(s) 491, 638, 1434
BsmFI GGGAC 1 cut(s) 957
BsnI GGCC 7 cut(s) 156, 174, 210, 985, 1053, 1180, 1364
Bso31I GGTCTC 1 cut(s) 491
BsoBI CYCGRG 3 cut(s) 150, 586, 917
Bsp1286I GDGCHC 2 cut(s) 1073, 1167
Bsp1407I TGTACA 1 cut(s) 760
Bsp143I GATC 2 cut(s) 653, 780
Bsp1720I GCTNAGC 2 cut(s) 280, 1191
BspACI CCGC 1 cut(s) 165
BspANI GGCC 7 cut(s) 156, 174, 210, 985, 1053, 1180, 1364
BspCNI CTCAG 2 cut(s) 352, 1183
BspHI TCATGA 2 cut(s) 369, 909
BspLI GGNNCC 2 cut(s) 1052, 1070
BspPI GGATC 1 cut(s) 775
BspT107I GGYRCC 1 cut(s) 1068
BspTNI GGTCTC 1 cut(s) 491
BsrDI GCAATG 1 cut(s) 1321
BsrGI TGTACA 1 cut(s) 760
BsrI ACTGG 2 cut(s) 405, 854
BssECI CCNNGG 3 cut(s) 151, 1022, 1335
BssMI GATC 2 cut(s) 653, 780
BssT1I CCWWGG 1 cut(s) 1335
Bst2UI CCWGG 3 cut(s) 555, 1023, 1418
Bst4CI ACNGT 5 cut(s) 380, 538, 723, 907, 1217
Bst6I CTCTTC 1 cut(s) 1340
BstAUI TGTACA 1 cut(s) 760
BstC8I GCNNGC 2 cut(s) 29, 140
BstDEI CTNAG 4 cut(s) 280, 339, 697, 1191
BstF5I GGATG 4 cut(s) 248, 474, 582, 1133
BstKTI GATC 2 cut(s) 656, 783
BstMAI GTCTC 3 cut(s) 491, 638, 1434
BstMBI GATC 2 cut(s) 653, 780
BstMWI GCNNNNNNNGC 2 cut(s) 450, 1361
BstNI CCWGG 3 cut(s) 555, 1023, 1418
BstNSI RCATGY 2 cut(s) 20, 31
BstSCI CCNGG 4 cut(s) 36, 553, 1021, 1416
BstSFI CTRYAG 2 cut(s) 376, 1101
BstSLI GKGCMC 2 cut(s) 1073, 1167
BstV1I GCAGC 1 cut(s) 934
BstX2I RGATCY 1 cut(s) 780
BstXI CCANNNNNNTGG 1 cut(s) 972
BstYI RGATCY 1 cut(s) 780
Bsu36I CCTNAGG 1 cut(s) 339
BsuI GTATCC 2 cut(s) 543, 578
BsuRI GGCC 7 cut(s) 156, 174, 210, 985, 1053, 1180, 1364
BtsCI GGATG 4 cut(s) 248, 474, 582, 1133
BtsIMutI CAGTG 1 cut(s) 719
Cac8I GCNNGC 2 cut(s) 29, 140
CciI TCATGA 2 cut(s) 369, 909
Cfr13I GGNCC 4 cut(s) 155, 755, 1051, 1373
CseI GACGC 1 cut(s) 144
CsiI ACCWGGT 1 cut(s) 1416
Csp6I GTAC 3 cut(s) 124, 761, 1213
CviQI GTAC 3 cut(s) 124, 761, 1213
DdeI CTNAG 4 cut(s) 280, 339, 697, 1191
DpnI GATC 2 cut(s) 655, 782
DpnII GATC 2 cut(s) 653, 780
DraI TTTAAA 1 cut(s) 576
DraIII CACNNNGTG 2 cut(s) 434, 1124
Eam1104I CTCTTC 1 cut(s) 1340
EarI CTCTTC 1 cut(s) 1340
Eco130I CCWWGG 1 cut(s) 1335
Eco147I AGGCCT 2 cut(s) 985, 1364
Eco31I GGTCTC 1 cut(s) 491
Eco47I GGWCC 2 cut(s) 755, 1373
Eco57I CTGAAG 3 cut(s) 274, 443, 1409
Eco81I CCTNAGG 1 cut(s) 339
Eco88I CYCGRG 3 cut(s) 150, 586, 917
EcoO109I RGGNCCY 2 cut(s) 155, 1051
EcoRI GAATTC 1 cut(s) 313
EcoRII CCWGG 3 cut(s) 553, 1021, 1416
EcoT14I CCWWGG 1 cut(s) 1335
ErhI CCWWGG 1 cut(s) 1335
FaqI GGGAC 1 cut(s) 957
Fnu4HI GCNGC 1 cut(s) 923
FokI GGATG 4 cut(s) 235, 461, 569, 1140
Fsp4HI GCNGC 1 cut(s) 923
FspBI CTAG 3 cut(s) 71, 1031, 1368
GluI GCNGC 1 cut(s) 923
GsaI CCCAGC 3 cut(s) 788, 1002, 1100
HaeIII GGCC 7 cut(s) 156, 174, 210, 985, 1053, 1180, 1364
HapII CCGG 2 cut(s) 38, 410
HgaI GACGC 1 cut(s) 144
HincII GTYRAC 2 cut(s) 115, 1414
HindII GTYRAC 2 cut(s) 115, 1414
HinfI GANTC 6 cut(s) 260, 406, 471, 503, 812, 1004
HpaI GTTAAC 1 cut(s) 1414
HpaII CCGG 2 cut(s) 38, 410
HphI GGTGA 3 cut(s) 404, 458, 1265
Hpy166II GTNNAC 2 cut(s) 115, 1414
Hpy188I TCNGA 3 cut(s) 293, 780, 896
Hpy8I GTNNAC 2 cut(s) 115, 1414
HpyAV CCTTC 5 cut(s) 189, 298, 467, 1271, 1304
HpyCH4III ACNGT 5 cut(s) 380, 538, 723, 907, 1217
HpyCH4IV ACGT 1 cut(s) 686
HpyCH4V TGCA 7 cut(s) 20, 27, 227, 351, 719, 950, 1221
HpyF10VI GCNNNNNNNGC 2 cut(s) 450, 1361
HpyF3I CTNAG 4 cut(s) 280, 339, 697, 1191
HpySE526I ACGT 1 cut(s) 686
KspAI GTTAAC 1 cut(s) 1414
Kzo9I GATC 2 cut(s) 653, 780
LmnI GCTCC 1 cut(s) 289
Lsp1109I GCAGC 1 cut(s) 934
LweI GCATC 3 cut(s) 214, 376, 706
MabI ACCWGGT 1 cut(s) 1416
MaeI CTAG 3 cut(s) 71, 1031, 1368
MaeII ACGT 1 cut(s) 686
MaeIII GTNAC 2 cut(s) 47, 343
MalI GATC 2 cut(s) 655, 782
MboI GATC 2 cut(s) 653, 780
MboII GAAGA 6 cut(s) 309, 312, 407, 1046, 1339, 1357
MflI RGATCY 1 cut(s) 780
MhlI GDGCHC 2 cut(s) 1073, 1167
MlyI GAGTC 1 cut(s) 465
MmeI TCCRAC 1 cut(s) 242
MroXI GAANNNNTTC 2 cut(s) 198, 686
MseI TTAA 6 cut(s) 144, 575, 860, 1041, 1413, 1441
MslI CAYNNNNRTG 2 cut(s) 253, 1238
MspA1I CMGCKG 2 cut(s) 167, 1010
MspI CCGG 2 cut(s) 38, 410
MspR9I CCNGG 4 cut(s) 38, 555, 1023, 1418
MvaI CCWGG 3 cut(s) 555, 1023, 1418
MwoI GCNNNNNNNGC 2 cut(s) 450, 1361
NciI CCSGG 1 cut(s) 38
NdeII GATC 2 cut(s) 653, 780
NlaIV GGNNCC 2 cut(s) 1052, 1070
NmuCI GTSAC 1 cut(s) 47
NspI RCATGY 2 cut(s) 20, 31
PaeI GCATGC 1 cut(s) 31
PagI TCATGA 2 cut(s) 369, 909
PceI AGGCCT 2 cut(s) 985, 1364
PdmI GAANNNNTTC 2 cut(s) 198, 686
PfeI GAWTC 5 cut(s) 260, 406, 503, 812, 1004
PkrI GCNGC 1 cut(s) 924
PleI GAGTC 1 cut(s) 465
PpsI GAGTC 1 cut(s) 465
Psp6I CCWGG 3 cut(s) 553, 1021, 1416
PspFI CCCAGC 3 cut(s) 784, 998, 1096
PspGI CCWGG 3 cut(s) 553, 1021, 1416
PspN4I GGNNCC 2 cut(s) 1052, 1070
PspPI GGNCC 4 cut(s) 155, 755, 1051, 1373
PsrI GAACNNNNNNTAC 2 cut(s) 674, 706
PsuI RGATCY 1 cut(s) 780
PvuII CAGCTG 1 cut(s) 1010
RsaI GTAC 3 cut(s) 125, 762, 1214
RsaNI GTAC 3 cut(s) 124, 761, 1213
RseI CAYNNNNRTG 2 cut(s) 253, 1238
SaqAI TTAA 6 cut(s) 144, 575, 860, 1041, 1413, 1441
SatI GCNGC 1 cut(s) 923
Sau3AI GATC 2 cut(s) 653, 780
Sau96I GGNCC 4 cut(s) 155, 755, 1051, 1373
SchI GAGTC 1 cut(s) 465
ScrFI CCNGG 4 cut(s) 38, 555, 1023, 1418
SduI GDGCHC 2 cut(s) 1073, 1167
SexAI ACCWGGT 1 cut(s) 1416
SfaNI GCATC 3 cut(s) 214, 376, 706
SfcI CTRYAG 2 cut(s) 376, 1101
SinI GGWCC 2 cut(s) 755, 1373
SmiMI CAYNNNNRTG 2 cut(s) 253, 1238
SmlI CTYRAG 1 cut(s) 42
SmoI CTYRAG 1 cut(s) 42
SphI GCATGC 1 cut(s) 31
SseBI AGGCCT 2 cut(s) 985, 1364
SsiI CCGC 1 cut(s) 165
SspMI CTAG 3 cut(s) 71, 1031, 1368
StuI AGGCCT 2 cut(s) 985, 1364
StyD4I CCNGG 4 cut(s) 36, 553, 1021, 1416
StyI CCWWGG 1 cut(s) 1335
TaaI ACNGT 5 cut(s) 380, 538, 723, 907, 1217
TaiI ACGT 1 cut(s) 689
TatI WGTACW 3 cut(s) 123, 760, 1212
TfiI GAWTC 5 cut(s) 260, 406, 503, 812, 1004
Tru1I TTAA 6 cut(s) 144, 575, 860, 1041, 1413, 1441
Tru9I TTAA 6 cut(s) 144, 575, 860, 1041, 1413, 1441
TscAI CASTG 1 cut(s) 726
TseFI GTSAC 1 cut(s) 47
TseI GCWGC 1 cut(s) 922
Tsp45I GTSAC 1 cut(s) 47
TspDTI ATGAA 6 cut(s) 89, 436, 583, 720, 764, 1217
TspGWI ACGGA 1 cut(s) 560
TspRI CASTG 1 cut(s) 726
VpaK11BI GGWCC 2 cut(s) 755, 1373
XapI RAATTY 5 cut(s) 313, 628, 871, 1396, 1437
XbaI TCTAGA 1 cut(s) 1030
XceI RCATGY 2 cut(s) 20, 31
XmnI GAANNNNTTC 2 cut(s) 198, 686
XspI CTAG 3 cut(s) 71, 1031, 1368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.