Rh7CG494500

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
66427870 .. 66474805
46936 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG494500.1

Sequence Viewer

Length: 1377 bp
ATGCTAAAATTGGCTAAATTCCTCCACTACAAAGGGTTTCATATAACCTTTGTCAACACAGTCTACAACCATGAGCGCCTGCTTAAATCCCGAGGCCCCAAATCCCTTGATGGACTTCCTTCCTTTAGGTTCAAGACAATTCCGGATGGCCTCCCTCCGACTGATGCCAATGCCACCCAACACATACCATCCCTATCTTATTCCACTAGTAAAAACTGCTTAGCACCCTTCAGAAACCTTCTTTCAGAACTCAATTCTTCGCCAAACTCCCCGCCTGTTACTTGCATAGTTGCTGATGGTGGCATGACCTTCACGCTTGATGCAGCACAAGAGCTTGGCCTTCCGGAAGTTCTCCTCAAGACACAAAGTGCTTGTGGCTTCTTGTGCTACCTTCACTATGCCCATCTCATTGAAAAGGGTCTTACTCCTCTTAAAGATGCCAGTTATTTGACAAATGGCTATTTGGACACTGTGATAGATTGGATACCGGGCATTAGAAGTATCCGTTTGAGGGACATACCGACCTTCATTAGAACCACAGACCCAGATGACATCATGTTGAAATATCTCGTGGTTGAGATGGAAAGAGCTCAGAGAGCGTCTGCTATCGTTATTAACACATTCGATGCGTTGGACCATGATGTTTTGGAAGCACTTTCAAGATTGCTACCACCTGTTTACTCCATTGGATCTCTACACCTACAAGTCAATCAGATCCCAGCAGATAACGATTTGAAGTCAATTGGGTCAAACCTATGGAGAGAAGAACCAGAGTGTCTCGAATGGCTCGACTCCAAAGCACCAAATTCTGTGATTTACGTAAACTTTGGAAGTATCACAGTGATGAAAGACGAGCAGCTGATTGAGTTTGCTTGGGGTCTTGCAAATAGCAACATAACCTTTTTGTGGGTAATTAGGCCTGATCTTGTTGCAGGGGAATTAGCAGTGCTTCCTCCCGAGTTTGTGCAAGAGACCAAGGGAAGGAGTATGTTGGCGAGTTGGTGCTCTCAAGAACAAGTGTTGAACCACCCAGCTGTAGGAGGGTTCTTGACACACAGTGGATGGAACTCTACGATAGAAAGTGTGTGCGCTGGAGTTCCCATGATATGCTGGCCCTTCTTTGCTGACCAACAAACAAATTGTAGGTTCTGTTGCAAAGAATGGGGTATAGGCATGGAGATAGATGGTGATGTTAAAAGGAATTACATAGAAGGCCTTGCGAGAAAGTTAATGGAAGGAAAGGAAGGCAAAGAGATGAGGAAGAAAGCCTTGGAATGGAAGAAATTGGCAGAGGAGGCCACCACTGCTCCCAATGGTTCGTCTTTCTTGAATTTGGACGAGTTGGTCAACCAGATGCTTCTTTCTCCTAAAAATTAG

Protein Analysis

458

Amino Acids

51.18

Weight (kDa)

5.56

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 259 - 390 7.9e-25 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1343
AccI GTMKAC 1 cut(s) 63
AccIII TCCGGA 2 cut(s) 142, 343
AciI CCGC 1 cut(s) 272
AclWI GGATC 2 cut(s) 697, 709
AcsI RAATTY 3 cut(s) 17, 805, 1330
AcuI CTGAAG 1 cut(s) 214
AdeI CACNNNGTG 2 cut(s) 368, 1058
AfiI CCNNNNNNNGG 5 cut(s) 511, 906, 981, 1037, 1275
AgsI TTSAA 7 cut(s) 133, 413, 562, 660, 736, 1024, 1330
AhlI ACTAGT 1 cut(s) 206
AjuI GAANNNNNNNTTGG 2 cut(s) 1253, 1285
AluBI AGCT 4 cut(s) 334, 590, 859, 1034
AluI AGCT 4 cut(s) 334, 590, 859, 1034
Alw21I GWGCWC 2 cut(s) 592, 1007
Alw26I GTCTC 2 cut(s) 782, 965
AlwI GGATC 2 cut(s) 697, 709
Ama87I CYCGRG 2 cut(s) 90, 956
Aor13HI TCCGGA 2 cut(s) 142, 343
AoxI GGCC 7 cut(s) 94, 148, 337, 917, 1112, 1213, 1296
ApeKI GCWGC 2 cut(s) 323, 856
ApoI RAATTY 3 cut(s) 17, 805, 1330
AspLEI GCGC 2 cut(s) 78, 1091
AspS9I GGNCC 3 cut(s) 95, 634, 1113
AsuC2I CCSGG 1 cut(s) 489
AsuHPI GGTGA 1 cut(s) 1199
AvaI CYCGRG 2 cut(s) 90, 956
AvaII GGWCC 1 cut(s) 634
BanII GRGCYC 1 cut(s) 592
BauI CACGAG 1 cut(s) 569
Bbv12I GWGCWC 2 cut(s) 592, 1007
BbvI GCAGC 2 cut(s) 335, 868
BccI CCATC 8 cut(s) 104, 140, 196, 290, 411, 574, 1056, 1178
BciVI GTATCC 2 cut(s) 477, 512
BcnI CCSGG 1 cut(s) 489
BcoDI GTCTC 2 cut(s) 782, 965
BcuI ACTAGT 1 cut(s) 206
BfaI CTAG 1 cut(s) 207
BfmI CTRYAG 1 cut(s) 1035
BfoI RGCGCY 1 cut(s) 79
BfuI GTATCC 2 cut(s) 477, 512
BisI GCNGC 2 cut(s) 324, 857
BlpI GCTNAGC 1 cut(s) 220
BlsI GCNGC 2 cut(s) 325, 858
Bme1390I CCNGG 1 cut(s) 489
Bme18I GGWCC 1 cut(s) 634
BmeT110I CYCGRG 2 cut(s) 90, 956
BmgT120I GGNCC 3 cut(s) 95, 634, 1113
BmiI GGNNCC 1 cut(s) 97
BmrFI CCNGG 1 cut(s) 489
BmsI GCATC 5 cut(s) 154, 310, 427, 616, 1344
BpmI CTGGAG 1 cut(s) 1113
Bpu1102I GCTNAGC 1 cut(s) 220
BpuEI CTTGAG 2 cut(s) 341, 993
BpuMI CCSGG 1 cut(s) 489
BsaAI YACGTR 1 cut(s) 820
BsaI GGTCTC 1 cut(s) 965
BsaJI CCNNGG 3 cut(s) 91, 975, 1269
BsaWI WCCGGW 2 cut(s) 142, 343
BsaXI ACNNNNNCTCC 2 cut(s) 1291, 1321
Bsc4I CCNNNNNNNGG 5 cut(s) 511, 906, 981, 1037, 1275
Bse1I ACTGG 1 cut(s) 441
BseAI TCCGGA 2 cut(s) 142, 343
BseDI CCNNGG 3 cut(s) 91, 975, 1269
BseGI GGATG 3 cut(s) 151, 188, 1067
BseLI CCNNNNNNNGG 5 cut(s) 511, 906, 981, 1037, 1275
BseMII CTCAG 1 cut(s) 605
BseNI ACTGG 1 cut(s) 441
BseRI GAGGAG 3 cut(s) 344, 417, 1307
BseXI GCAGC 2 cut(s) 335, 868
BseYI CCCAGC 2 cut(s) 718, 1030
BshFI GGCC 7 cut(s) 96, 150, 339, 919, 1114, 1215, 1298
BsiHKAI GWGCWC 2 cut(s) 592, 1007
BsiHKCI CYCGRG 2 cut(s) 90, 956
BsiSI CCGG 3 cut(s) 143, 344, 488
BslFI GGGAC 1 cut(s) 527
BslI CCNNNNNNNGG 5 cut(s) 511, 906, 981, 1037, 1275
BsmAI GTCTC 2 cut(s) 782, 965
BsmFI GGGAC 1 cut(s) 527
BsnI GGCC 7 cut(s) 96, 150, 339, 919, 1114, 1215, 1298
Bso31I GGTCTC 1 cut(s) 965
BsoBI CYCGRG 2 cut(s) 90, 956
Bsp1286I GDGCHC 2 cut(s) 592, 1007
Bsp13I TCCGGA 2 cut(s) 142, 343
Bsp143I GATC 3 cut(s) 689, 714, 922
Bsp1720I GCTNAGC 1 cut(s) 220
BspACI CCGC 1 cut(s) 272
BspANI GGCC 7 cut(s) 96, 150, 339, 919, 1114, 1215, 1298
BspCNI CTCAG 1 cut(s) 604
BspEI TCCGGA 2 cut(s) 142, 343
BspLI GGNNCC 1 cut(s) 97
BspPI GGATC 2 cut(s) 697, 709
BspTNI GGTCTC 1 cut(s) 965
BsrI ACTGG 1 cut(s) 441
BssECI CCNNGG 3 cut(s) 91, 975, 1269
BssMI GATC 3 cut(s) 689, 714, 922
BssSI CACGAG 1 cut(s) 569
BssT1I CCWWGG 2 cut(s) 975, 1269
Bst2BI CACGAG 1 cut(s) 569
Bst4CI ACNGT 4 cut(s) 61, 472, 841, 1058
BstBAI YACGTR 1 cut(s) 820
BstC8I GCNNGC 2 cut(s) 80, 1112
BstDEI CTNAG 2 cut(s) 220, 591
BstF5I GGATG 3 cut(s) 151, 188, 1067
BstH2I RGCGCY 1 cut(s) 79
BstHHI GCGC 2 cut(s) 78, 1091
BstKTI GATC 3 cut(s) 692, 717, 925
BstMAI GTCTC 2 cut(s) 782, 965
BstMBI GATC 3 cut(s) 689, 714, 922
BstMWI GCNNNNNNNGC 4 cut(s) 384, 596, 1295, 1304
BstSCI CCNGG 1 cut(s) 487
BstSFI CTRYAG 1 cut(s) 1035
BstSNI TACGTA 1 cut(s) 820
BstV1I GCAGC 2 cut(s) 335, 868
BstX2I RGATCY 2 cut(s) 689, 714
BstYI RGATCY 2 cut(s) 689, 714
BsuI GTATCC 2 cut(s) 477, 512
BsuRI GGCC 7 cut(s) 96, 150, 339, 919, 1114, 1215, 1298
BtsCI GGATG 3 cut(s) 151, 188, 1067
BtsI GCAGTG 2 cut(s) 951, 1302
BtsIMutI CAGTG 5 cut(s) 468, 846, 951, 1063, 1302
Cac8I GCNNGC 2 cut(s) 80, 1112
CfoI GCGC 2 cut(s) 78, 1091
Cfr13I GGNCC 3 cut(s) 95, 634, 1113
CseI GACGC 1 cut(s) 588
CviAII CATG 6 cut(s) 71, 304, 556, 638, 1102, 1174
DdeI CTNAG 2 cut(s) 220, 591
DpnI GATC 3 cut(s) 691, 716, 924
DpnII GATC 3 cut(s) 689, 714, 922
DraIII CACNNNGTG 2 cut(s) 368, 1058
DrdI GACNNNNNNGTC 1 cut(s) 1343
DseDI GACNNNNNNGTC 1 cut(s) 1343
Ecl136II GAGCTC 1 cut(s) 590
Eco105I TACGTA 1 cut(s) 820
Eco130I CCWWGG 2 cut(s) 975, 1269
Eco147I AGGCCT 2 cut(s) 919, 1215
Eco24I GRGCYC 1 cut(s) 592
Eco31I GGTCTC 1 cut(s) 965
Eco47I GGWCC 1 cut(s) 634
Eco53kI GAGCTC 1 cut(s) 590
Eco57I CTGAAG 1 cut(s) 214
Eco88I CYCGRG 2 cut(s) 90, 956
EcoICRI GAGCTC 1 cut(s) 590
EcoO109I RGGNCCY 1 cut(s) 95
EcoT14I CCWWGG 2 cut(s) 975, 1269
EcoT38I GRGCYC 1 cut(s) 592
ErhI CCWWGG 2 cut(s) 975, 1269
FaeI CATG 6 cut(s) 74, 307, 559, 641, 1105, 1177
FalI AAGNNNNNCTT 2 cut(s) 1253, 1285
FaqI GGGAC 1 cut(s) 527
FatI CATG 6 cut(s) 70, 303, 555, 637, 1101, 1173
FauI CCCGC 1 cut(s) 279
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 2 cut(s) 324, 857
FokI GGATG 3 cut(s) 158, 175, 1074
FriOI GRGCYC 1 cut(s) 592
Fsp4HI GCNGC 2 cut(s) 324, 857
FspBI CTAG 1 cut(s) 207
GlaI GCGC 2 cut(s) 77, 1090
GluI GCNGC 2 cut(s) 324, 857
GsaI CCCAGC 2 cut(s) 722, 1034
GsuI CTGGAG 1 cut(s) 1113
HaeII RGCGCY 1 cut(s) 79
HaeIII GGCC 7 cut(s) 96, 150, 339, 919, 1114, 1215, 1298
HapII CCGG 3 cut(s) 143, 344, 488
HgaI GACGC 1 cut(s) 588
HhaI GCGC 2 cut(s) 78, 1091
Hin1II CATG 6 cut(s) 74, 307, 559, 641, 1105, 1177
Hin6I GCGC 2 cut(s) 76, 1089
HinP1I GCGC 2 cut(s) 76, 1089
HincII GTYRAC 2 cut(s) 55, 1348
HindII GTYRAC 2 cut(s) 55, 1348
HinfI GANTC 1 cut(s) 791
HpaII CCGG 3 cut(s) 143, 344, 488
HphI GGTGA 1 cut(s) 1199
Hpy166II GTNNAC 5 cut(s) 55, 64, 679, 823, 1348
Hpy188I TCNGA 5 cut(s) 159, 233, 247, 594, 714
Hpy8I GTNNAC 5 cut(s) 55, 64, 679, 823, 1348
HpyCH4III ACNGT 4 cut(s) 61, 472, 841, 1058
HpyCH4IV ACGT 1 cut(s) 819
HpyCH4V TGCA 6 cut(s) 285, 323, 884, 932, 967, 1155
HpyF10VI GCNNNNNNNGC 4 cut(s) 384, 596, 1295, 1304
HpyF3I CTNAG 2 cut(s) 220, 591
HpySE526I ACGT 1 cut(s) 819
Hsp92II CATG 6 cut(s) 74, 307, 559, 641, 1105, 1177
HspAI GCGC 2 cut(s) 76, 1089
Kpn2I TCCGGA 2 cut(s) 142, 343
Kzo9I GATC 3 cut(s) 689, 714, 922
LmnI GCTCC 1 cut(s) 1312
Lsp1109I GCAGC 2 cut(s) 335, 868
LweI GCATC 5 cut(s) 154, 310, 427, 616, 1344
MaeI CTAG 1 cut(s) 207
MaeII ACGT 1 cut(s) 819
MaeIII GTNAC 1 cut(s) 277
MalI GATC 3 cut(s) 691, 716, 924
MboI GATC 3 cut(s) 689, 714, 922
MboII GAAGA 4 cut(s) 249, 776, 1273, 1291
MfeI CAATTG 1 cut(s) 741
MflI RGATCY 2 cut(s) 689, 714
MhlI GDGCHC 2 cut(s) 592, 1007
MlyI GAGTC 1 cut(s) 785
MmeI TCCRAC 2 cut(s) 182, 612
MroI TCCGGA 2 cut(s) 142, 343
MseI TTAA 5 cut(s) 84, 432, 615, 1194, 1229
MslI CAYNNNNRTG 1 cut(s) 842
MspA1I CMGCKG 2 cut(s) 859, 1034
MspI CCGG 3 cut(s) 143, 344, 488
MspR9I CCNGG 1 cut(s) 489
MunI CAATTG 1 cut(s) 741
MwoI GCNNNNNNNGC 4 cut(s) 384, 596, 1295, 1304
NciI CCSGG 1 cut(s) 489
NdeII GATC 3 cut(s) 689, 714, 922
NlaIII CATG 6 cut(s) 74, 307, 559, 641, 1105, 1177
NlaIV GGNNCC 1 cut(s) 97
PceI AGGCCT 2 cut(s) 919, 1215
PcsI WCGNNNNNNNCGW 1 cut(s) 786
PkrI GCNGC 2 cut(s) 325, 858
PleI GAGTC 1 cut(s) 785
PpsI GAGTC 1 cut(s) 785
Ppu21I YACGTR 1 cut(s) 820
Psp124BI GAGCTC 1 cut(s) 592
PspFI CCCAGC 2 cut(s) 718, 1030
PspN4I GGNNCC 1 cut(s) 97
PspPI GGNCC 3 cut(s) 95, 634, 1113
PsuI RGATCY 2 cut(s) 689, 714
PvuII CAGCTG 2 cut(s) 859, 1034
RseI CAYNNNNRTG 1 cut(s) 842
SacI GAGCTC 1 cut(s) 592
SaqAI TTAA 5 cut(s) 84, 432, 615, 1194, 1229
SatI GCNGC 2 cut(s) 324, 857
Sau3AI GATC 3 cut(s) 689, 714, 922
Sau96I GGNCC 3 cut(s) 95, 634, 1113
SchI GAGTC 1 cut(s) 785
ScrFI CCNGG 1 cut(s) 489
SduI GDGCHC 2 cut(s) 592, 1007
SfaNI GCATC 5 cut(s) 154, 310, 427, 616, 1344
SfcI CTRYAG 1 cut(s) 1035
SinI GGWCC 1 cut(s) 634
SmiMI CAYNNNNRTG 1 cut(s) 842
SmlI CTYRAG 2 cut(s) 356, 1008
SmoI CTYRAG 2 cut(s) 356, 1008
SnaBI TACGTA 1 cut(s) 820
SpeI ACTAGT 1 cut(s) 206
SseBI AGGCCT 2 cut(s) 919, 1215
SsiI CCGC 1 cut(s) 272
SspMI CTAG 1 cut(s) 207
SstI GAGCTC 1 cut(s) 592
StuI AGGCCT 2 cut(s) 919, 1215
StyD4I CCNGG 1 cut(s) 487
StyI CCWWGG 2 cut(s) 975, 1269
TaaI ACNGT 4 cut(s) 61, 472, 841, 1058
TaiI ACGT 1 cut(s) 822
TaqI TCGA 3 cut(s) 624, 780, 789
Tru1I TTAA 5 cut(s) 84, 432, 615, 1194, 1229
Tru9I TTAA 5 cut(s) 84, 432, 615, 1194, 1229
TscAI CASTG 5 cut(s) 475, 846, 951, 1063, 1309
TseI GCWGC 2 cut(s) 323, 856
TspDTI ATGAA 3 cut(s) 29, 517, 860
TspGWI ACGGA 1 cut(s) 494
TspRI CASTG 5 cut(s) 475, 846, 951, 1063, 1309
VpaK11BI GGWCC 1 cut(s) 634
XapI RAATTY 3 cut(s) 17, 805, 1330
XmiI GTMKAC 1 cut(s) 63
XspI CTAG 1 cut(s) 207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.