MD08G1185500.v1.1

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr08
Physical Location & Seq
Reverse (-)
23237881 .. 23239888
2008 bp
Loading structure...
UTR
Exon/CDS
Intron
MD08G1185500.v1.1.491

Sequence Viewer

Length: 1452 bp
ATGGGTTCAAAAGGTATGATAGAGAAGCCACATGCAGTTTTCATACCGTACCCAGCTCAGGGTCACATAAACCCTATGCTGCAATTAGCCAAGCTCCTCAACTACAAAGGCTTTCACATAACCTTTGTGAACACAGAGTTCAACCACAGACGCCTTCTAAAAGCCCGAGGTCCCAACTCTCTTGATGGCCTCCCCTCCTTTAGGTTCGAAACCATTCCTGATGGCCTCCCTACAACTGATGTCAACGCCACTCAAGACATAACAGCTCTATGCTTTTCCACTAGGAAAAATTGCTTAGAACCTTTCAAAGACCTTTTGTCCAAGCTCAATTCCTTGCCCAATTCCCCTCCAGTTACCTGCATAGTTTCTGATGGTGGCATGACCTTCACGCTTGAAGCAGCCCAAGAATTAGGCATTCCAGTTGTTATATTTGCAACAGCAAGTGCTTGCGGTTTGATGGGCTACCTTCAGTTGCGCCCTCTCATCGAAAAGGGCTTAATACCCCTTAAAGATGCAAGCTACTTGACGAATGGGTATTTGGACACGGTTATAGATTGGATACCAGGCATGAGAGGTATCCGACTGAGGGACATCCCAACCTTCATTAGAACCACAGACCCAAATGACATCATGTTGGAATTTCTTAGGGTTGAAATAGGACGATATCATAGAGCTTCTGCTTTCATTTTGAACACGTTTTATGCCTTTGAACATGAAGTGTTAGATGCACTTTCCACTTTGCTACCACCTATATACTCCGTCGGACCCCTACATCTACAGCTTAATCAGATCCCAGCAGAGAACGAGTTGAAGTCGATTGGATCAAACCTATGGACAGAAGAACCAGAGTGCCTTGAATGGCTCGACTCTAAAGAACCCAATTCCGTGGTTTATGTCAATTTCGGAAGCATCACAGTCCTGACAGAGGAGCAGCTAACTGAGTTTGCTTGGGGACTTGCAAACAGCAATCAAACATTCCTTTGGGTAATTAGGCCTGACCTTCTTGTTGGGGAATCAGCTGTCGTTCCTTCAGAGTTTTCGGAAGAGACCAAAGAAAGAAGTCTAGTGGCAAGTTGGTGCCCTCAACAAGAAGTTCTGAGTCACCCAGCTATCGGAGGGTTCTTGACCCACAGCGGATGGAACTCTATCCTTGAAAGCTTGTGTGGTGGAGTGCCTATGATCTGTTGGCCCTTCTTTGCAGAACAACAAATGAATTGTAGGTTCAGTTGCAAAGTGTGGGGCATAGGCATGGAGATAGAGGGCGATGTTAAAAGAGATTACATAGAAGGACTTGTGAGAAAGATAATGGAGGGAGAGGAAGGCAAAGAGATGCGGAAGAAAGCCCTGGAATGGAAAAAGTTGGCAACGGAGGCCACCACTAGTCCTAATGGCACGTCTTTTGTTGATTTGGACAGAATGGCTAGCCAGGTCCTTCAATCTCCAGTAAATTAG

Protein Analysis

484

Amino Acids

53.96

Weight (kDa)

5.13

Isoelectric Point (pI)

45.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 13 - 58 2e-06 Glycosyltransferase, N-terminal domain
UDPGT PF00201 229 - 442 5.2e-30 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 365
AccB1I GGYRCC 1 cut(s) 1077
AciI CCGC 3 cut(s) 450, 1134, 1333
AclWI GGATC 2 cut(s) 784, 829
AcsI RAATTY 1 cut(s) 638
AcuI CTGAAG 2 cut(s) 452, 1014
AcyI GRCGYC 1 cut(s) 151
AfaI GTAC 1 cut(s) 50
AfiI CCNNNNNNNGG 7 cut(s) 58, 59, 201, 586, 925, 1112, 1350
AflIII ACRYGT 1 cut(s) 693
AhdI GACNNNNNGTC 1 cut(s) 316
AhlI ACTAGT 1 cut(s) 1379
AjiI CACGTC 1 cut(s) 1395
AjnI CCWGG 3 cut(s) 562, 1344, 1425
AjuI GAANNNNNNNTTGG 2 cut(s) 521, 553
Alw26I GTCTC 1 cut(s) 1040
AlwI GGATC 2 cut(s) 784, 829
Ama87I CYCGRG 1 cut(s) 165
AoxI GGCC 5 cut(s) 187, 223, 992, 1187, 1371
ApeKI GCWGC 3 cut(s) 79, 398, 931
ApoI RAATTY 1 cut(s) 638
Asp700I GAANNNNTTC 1 cut(s) 213
AspLEI GCGC 1 cut(s) 477
AspS9I GGNCC 4 cut(s) 170, 764, 1188, 1429
AsuHPI GGTGA 1 cut(s) 1094
AsuII TTCGAA 1 cut(s) 207
AsuNHI GCTAGC 1 cut(s) 1421
AvaI CYCGRG 1 cut(s) 165
AvaII GGWCC 3 cut(s) 170, 764, 1429
BaeGI GKGCMC 1 cut(s) 1082
BanI GGYRCC 1 cut(s) 1077
BbvI GCAGC 3 cut(s) 66, 410, 943
BccI CCATC 5 cut(s) 179, 215, 365, 451, 1131
BciT130I CCWGG 3 cut(s) 564, 1346, 1427
BciVI GTATCC 2 cut(s) 552, 587
BcoDI GTCTC 1 cut(s) 1040
BcuI ACTAGT 1 cut(s) 1379
BfaI CTAG 4 cut(s) 282, 1064, 1380, 1422
BfmI CTRYAG 1 cut(s) 776
BfuAI ACCTGC 1 cut(s) 365
BfuI GTATCC 2 cut(s) 552, 587
BisI GCNGC 3 cut(s) 80, 399, 932
BlsI GCNGC 3 cut(s) 81, 400, 933
Bme1390I CCNGG 3 cut(s) 564, 1346, 1427
Bme18I GGWCC 3 cut(s) 170, 764, 1429
BmeRI GACNNNNNGTC 1 cut(s) 316
BmeT110I CYCGRG 1 cut(s) 165
BmgBI CACGTC 1 cut(s) 1395
BmgT120I GGNCC 4 cut(s) 170, 764, 1188, 1429
BmiI GGNNCC 3 cut(s) 172, 766, 1079
BmrFI CCNGG 3 cut(s) 564, 1346, 1427
BmsI GCATC 4 cut(s) 502, 715, 918, 1320
BmtI GCTAGC 1 cut(s) 1425
BpmI CTGGAG 2 cut(s) 333, 1425
Bpu10I CCTNAGC 1 cut(s) 57
Bpu14I TTCGAA 1 cut(s) 207
BpuEI CTTGAG 1 cut(s) 237
BsaHI GRCGYC 1 cut(s) 151
BsaI GGTCTC 1 cut(s) 1040
BsaJI CCNNGG 3 cut(s) 166, 885, 1344
Bsc4I CCNNNNNNNGG 7 cut(s) 58, 59, 201, 586, 925, 1112, 1350
Bse1I ACTGG 3 cut(s) 350, 419, 1442
BseBI CCWGG 3 cut(s) 564, 1346, 1427
BseDI CCNNGG 3 cut(s) 166, 885, 1344
BseGI GGATG 2 cut(s) 591, 1142
BseLI CCNNNNNNNGG 7 cut(s) 58, 59, 201, 586, 925, 1112, 1350
BseMII CTCAG 4 cut(s) 71, 575, 930, 1088
BseNI ACTGG 3 cut(s) 350, 419, 1442
BseRI GAGGAG 2 cut(s) 86, 941
BseSI GKGCMC 1 cut(s) 1082
BseXI GCAGC 3 cut(s) 66, 410, 943
BseYI CCCAGC 3 cut(s) 52, 793, 1105
BshFI GGCC 5 cut(s) 189, 225, 994, 1189, 1373
BshNI GGYRCC 1 cut(s) 1077
BsiHKCI CYCGRG 1 cut(s) 165
BslFI GGGAC 3 cut(s) 156, 602, 966
BslI CCNNNNNNNGG 7 cut(s) 58, 59, 201, 586, 925, 1112, 1350
BsmAI GTCTC 1 cut(s) 1040
BsmFI GGGAC 3 cut(s) 156, 602, 966
BsmI GAATGC 1 cut(s) 414
BsnI GGCC 5 cut(s) 189, 225, 994, 1189, 1373
Bso31I GGTCTC 1 cut(s) 1040
BsoBI CYCGRG 1 cut(s) 165
Bsp119I TTCGAA 1 cut(s) 207
Bsp1286I GDGCHC 1 cut(s) 1082
Bsp143I GATC 3 cut(s) 789, 821, 1179
BspACI CCGC 3 cut(s) 450, 1134, 1333
BspANI GGCC 5 cut(s) 189, 225, 994, 1189, 1373
BspCNI CTCAG 4 cut(s) 70, 576, 931, 1089
BspLI GGNNCC 3 cut(s) 172, 766, 1079
BspMI ACCTGC 1 cut(s) 365
BspOI GCTAGC 1 cut(s) 1425
BspPI GGATC 2 cut(s) 784, 829
BspT104I TTCGAA 1 cut(s) 207
BspT107I GGYRCC 1 cut(s) 1077
BspTNI GGTCTC 1 cut(s) 1040
BsrI ACTGG 3 cut(s) 350, 419, 1442
BssECI CCNNGG 3 cut(s) 166, 885, 1344
BssMI GATC 3 cut(s) 789, 821, 1179
BssNI GRCGYC 1 cut(s) 151
Bst2UI CCWGG 3 cut(s) 564, 1346, 1427
Bst4CI ACNGT 3 cut(s) 48, 547, 916
Bst6I CTCTTC 1 cut(s) 1038
BstACI GRCGYC 1 cut(s) 151
BstBI TTCGAA 1 cut(s) 207
BstC8I GCNNGC 3 cut(s) 448, 517, 1423
BstDEI CTNAG 6 cut(s) 57, 295, 584, 644, 939, 1097
BstDSI CCRYGG 1 cut(s) 885
BstENI CCTNNNNNAGG 2 cut(s) 199, 923
BstF5I GGATG 2 cut(s) 591, 1142
BstHHI GCGC 1 cut(s) 477
BstKTI GATC 3 cut(s) 792, 824, 1182
BstMAI GTCTC 1 cut(s) 1040
BstMBI GATC 3 cut(s) 789, 821, 1179
BstMWI GCNNNNNNNGC 1 cut(s) 1370
BstNI CCWGG 3 cut(s) 564, 1346, 1427
BstNSI RCATGY 1 cut(s) 35
BstSCI CCNGG 3 cut(s) 562, 1344, 1425
BstSFI CTRYAG 1 cut(s) 776
BstSLI GKGCMC 1 cut(s) 1082
BstV1I GCAGC 3 cut(s) 66, 410, 943
BstX2I RGATCY 1 cut(s) 789
BstXI CCANNNNNNTGG 1 cut(s) 886
BstYI RGATCY 1 cut(s) 789
BsuI GTATCC 2 cut(s) 552, 587
BsuRI GGCC 5 cut(s) 189, 225, 994, 1189, 1373
BtgI CCRYGG 1 cut(s) 885
BtgZI GCGATG 1 cut(s) 1278
BtrI CACGTC 1 cut(s) 1395
BtsCI GGATG 2 cut(s) 591, 1142
BveI ACCTGC 1 cut(s) 365
Cac8I GCNNGC 3 cut(s) 448, 517, 1423
CfoI GCGC 1 cut(s) 477
Cfr13I GGNCC 4 cut(s) 170, 764, 1188, 1429
CseI GACGC 1 cut(s) 159
Csp6I GTAC 1 cut(s) 49
CviAII CATG 6 cut(s) 32, 379, 568, 631, 713, 1249
CviQI GTAC 1 cut(s) 49
DdeI CTNAG 6 cut(s) 57, 295, 584, 644, 939, 1097
DpnI GATC 3 cut(s) 791, 823, 1181
DpnII GATC 3 cut(s) 789, 821, 1179
DriI GACNNNNNGTC 1 cut(s) 316
Eam1104I CTCTTC 1 cut(s) 1038
Eam1105I GACNNNNNGTC 1 cut(s) 316
EarI CTCTTC 1 cut(s) 1038
Eco147I AGGCCT 1 cut(s) 994
Eco31I GGTCTC 1 cut(s) 1040
Eco32I GATATC 1 cut(s) 665
Eco47I GGWCC 3 cut(s) 170, 764, 1429
Eco57I CTGAAG 2 cut(s) 452, 1014
Eco88I CYCGRG 1 cut(s) 165
EcoNI CCTNNNNNAGG 2 cut(s) 199, 923
EcoO109I RGGNCCY 2 cut(s) 170, 1429
EcoRII CCWGG 3 cut(s) 562, 1344, 1425
EcoRV GATATC 1 cut(s) 665
FaeI CATG 6 cut(s) 35, 382, 571, 634, 716, 1252
FaqI GGGAC 3 cut(s) 156, 602, 966
FatI CATG 6 cut(s) 31, 378, 567, 630, 712, 1248
Fnu4HI GCNGC 3 cut(s) 80, 399, 932
FokI GGATG 2 cut(s) 578, 1149
Fsp4HI GCNGC 3 cut(s) 80, 399, 932
FspBI CTAG 4 cut(s) 282, 1064, 1380, 1422
GlaI GCGC 1 cut(s) 476
GluI GCNGC 3 cut(s) 80, 399, 932
GsaI CCCAGC 3 cut(s) 56, 797, 1109
GsuI CTGGAG 2 cut(s) 333, 1425
HaeIII GGCC 5 cut(s) 189, 225, 994, 1189, 1373
HgaI GACGC 1 cut(s) 159
HhaI GCGC 1 cut(s) 477
Hin1I GRCGYC 1 cut(s) 151
Hin1II CATG 6 cut(s) 35, 382, 571, 634, 716, 1252
Hin6I GCGC 1 cut(s) 475
HinP1I GCGC 1 cut(s) 475
HincII GTYRAC 1 cut(s) 244
HindII GTYRAC 1 cut(s) 244
HindIII AAGCTT 1 cut(s) 1156
HinfI GANTC 3 cut(s) 866, 1013, 1099
HphI GGTGA 1 cut(s) 1094
Hpy166II GTNNAC 2 cut(s) 130, 244
Hpy188I TCNGA 9 cut(s) 370, 581, 764, 789, 905, 1033, 1042, 1098, 1115
Hpy188III TCNNGA 5 cut(s) 182, 218, 254, 919, 1123
Hpy8I GTNNAC 2 cut(s) 130, 244
Hpy99I CGWCG 1 cut(s) 764
HpyCH4III ACNGT 3 cut(s) 48, 547, 916
HpyCH4IV ACGT 2 cut(s) 695, 1394
HpyCH4V TGCA 9 cut(s) 35, 82, 360, 434, 515, 728, 959, 1199, 1230
HpyF10VI GCNNNNNNNGC 1 cut(s) 1370
HpyF3I CTNAG 6 cut(s) 57, 295, 584, 644, 939, 1097
HpySE526I ACGT 2 cut(s) 695, 1394
Hsp92I GRCGYC 1 cut(s) 151
Hsp92II CATG 6 cut(s) 35, 382, 571, 634, 716, 1252
HspAI GCGC 1 cut(s) 475
Kzo9I GATC 3 cut(s) 789, 821, 1179
LmnI GCTCC 2 cut(s) 99, 928
Lsp1109I GCAGC 3 cut(s) 66, 410, 943
LweI GCATC 4 cut(s) 502, 715, 918, 1320
MaeI CTAG 4 cut(s) 282, 1064, 1380, 1422
MaeII ACGT 2 cut(s) 695, 1394
MaeIII GTNAC 3 cut(s) 62, 352, 1100
MalI GATC 3 cut(s) 791, 823, 1181
MboI GATC 3 cut(s) 789, 821, 1179
MboII GAAGA 3 cut(s) 851, 1055, 1348
MflI RGATCY 1 cut(s) 789
MhlI GDGCHC 1 cut(s) 1082
MlyI GAGTC 2 cut(s) 860, 1108
MmeI TCCRAC 3 cut(s) 604, 615, 742
MroXI GAANNNNTTC 1 cut(s) 213
MseI TTAA 4 cut(s) 497, 507, 783, 1269
MslI CAYNNNNRTG 1 cut(s) 1247
MspA1I CMGCKG 2 cut(s) 1019, 1134
MspR9I CCNGG 3 cut(s) 564, 1346, 1427
Mva1269I GAATGC 1 cut(s) 414
MvaI CCWGG 3 cut(s) 564, 1346, 1427
MwoI GCNNNNNNNGC 1 cut(s) 1370
NdeII GATC 3 cut(s) 789, 821, 1179
NheI GCTAGC 1 cut(s) 1421
NlaIII CATG 6 cut(s) 35, 382, 571, 634, 716, 1252
NlaIV GGNNCC 3 cut(s) 172, 766, 1079
NmuCI GTSAC 2 cut(s) 62, 1100
NspI RCATGY 1 cut(s) 35
NspV TTCGAA 1 cut(s) 207
PceI AGGCCT 1 cut(s) 994
PctI GAATGC 1 cut(s) 414
PdmI GAANNNNTTC 1 cut(s) 213
PfeI GAWTC 1 cut(s) 1013
PkrI GCNGC 3 cut(s) 81, 400, 933
PleI GAGTC 2 cut(s) 860, 1107
PpsI GAGTC 2 cut(s) 860, 1107
PpuMI RGGWCCY 2 cut(s) 170, 1429
Psp5II RGGWCCY 2 cut(s) 170, 1429
Psp6I CCWGG 3 cut(s) 562, 1344, 1425
PspFI CCCAGC 3 cut(s) 52, 793, 1105
PspGI CCWGG 3 cut(s) 562, 1344, 1425
PspN4I GGNNCC 3 cut(s) 172, 766, 1079
PspPI GGNCC 4 cut(s) 170, 764, 1188, 1429
PspPPI RGGWCCY 2 cut(s) 170, 1429
PsuI RGATCY 1 cut(s) 789
PvuII CAGCTG 1 cut(s) 1019
RsaI GTAC 1 cut(s) 50
RsaNI GTAC 1 cut(s) 49
RseI CAYNNNNRTG 1 cut(s) 1247
SaqAI TTAA 4 cut(s) 497, 507, 783, 1269
SatI GCNGC 3 cut(s) 80, 399, 932
Sau3AI GATC 3 cut(s) 789, 821, 1179
Sau96I GGNCC 4 cut(s) 170, 764, 1188, 1429
SchI GAGTC 2 cut(s) 860, 1108
ScrFI CCNGG 3 cut(s) 564, 1346, 1427
SduI GDGCHC 1 cut(s) 1082
SfaNI GCATC 4 cut(s) 502, 715, 918, 1320
SfcI CTRYAG 1 cut(s) 776
SfuI TTCGAA 1 cut(s) 207
SinI GGWCC 3 cut(s) 170, 764, 1429
SmiMI CAYNNNNRTG 1 cut(s) 1247
SmlI CTYRAG 1 cut(s) 252
SmoI CTYRAG 1 cut(s) 252
SpeI ACTAGT 1 cut(s) 1379
SseBI AGGCCT 1 cut(s) 994
SsiI CCGC 3 cut(s) 450, 1134, 1333
SspMI CTAG 4 cut(s) 282, 1064, 1380, 1422
StuI AGGCCT 1 cut(s) 994
StyD4I CCNGG 3 cut(s) 562, 1344, 1425
TaaI ACNGT 3 cut(s) 48, 547, 916
TaiI ACGT 2 cut(s) 698, 1397
TaqI TCGA 4 cut(s) 207, 486, 815, 864
TfiI GAWTC 1 cut(s) 1013
Tru1I TTAA 4 cut(s) 497, 507, 783, 1269
Tru9I TTAA 4 cut(s) 497, 507, 783, 1269
TseFI GTSAC 2 cut(s) 62, 1100
TseI GCWGC 3 cut(s) 79, 398, 931
Tsp45I GTSAC 2 cut(s) 62, 1100
TspDTI ATGAA 5 cut(s) 31, 592, 673, 729, 1226
TspGWI ACGGA 3 cut(s) 748, 874, 1382
VpaK11BI GGWCC 3 cut(s) 170, 764, 1429
XagI CCTNNNNNAGG 2 cut(s) 199, 923
XapI RAATTY 1 cut(s) 638
XceI RCATGY 1 cut(s) 35
XmnI GAANNNNTTC 1 cut(s) 213
XspI CTAG 4 cut(s) 282, 1064, 1380, 1422
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.