FvH4_5g37000

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
27075756 .. 27078237
2482 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37000.t1

Sequence Viewer

Length: 1449 bp
ATGGGTTCCAACGCCTCGGAGAAGCCACATGCAGTTTGTATACCATACCCTGCTCAAGGTCACATAAACCCAATGCTAAAATTAGCTAAAATCCTTCACTACAGAGGCTTTCATATAACCTTTGTCAACACAGAGTACAACCATGAGCGCCTGCTTAGATCCCGAGGTCCCAACTCTCTCGATGGCCTGCCCTCGTTTAGGTTCAAATCGATTCCCGATGGCCTTCCTCCTACTGATGCCAATGTCACCCAAGACATACCTGCCTTATGTGGTTCCATTAGAAATAACTTTTTAGCACCCTTCAGAAGCCTTCTTTCAGAACTCAATTCTTCGTCAAATTCCCCTCCTGTTACTTGCATAATATCTGATTTAGGCACGACCTTCACTCTTGATGCAACCCATGAACTTGGCCTTCCAGTAGTCCTCTTCCAGACAGCGAGTGCTTGTACATTAATGTGCTACCTTCACCATGCCCATCTCATTGAAAAGGGTATTGTTCCACTTAAAGAGGCCAGTTATTTAACAAATGGCTACTTGGACACTGTAATAGACTGGTTACCTGGCTTGGGAAGTATACGTTTGAGGGACATGCCAACCTTCATTAGAACCACAGACCCAGATGATGTCATGCTGAGTTTTATTCTGTATATGATAGAACAAGCTCAAAGAGCGTCTGCTATCATTATTAACACATTTGATGCCTTGGAGCATAAAGTTTTAGATGCATTTTCAAGTTTGCTACCACCTGTGTATTCCATTGGACCTCTTCATCAACAACTCAGTCATATCCAAGAAGATGATGACTCAAAGACTATCGGGTCAAATCTTTGGAAAGAAGAACCGGAGTGTCTTGAATGGCTTGAGTCAAAAGAACCAAATTCTGTTGTTTATGTAAACTTTGGAAGTATCACAGTCATGACAGATGAGCAGCTGATTGAGTTTGCTTGGGGTCTCGCAAATAGTAACATGACCTTTTTGTGGGTGATTAGGCCTGATCTTGTGGCTGGGAACTCAGCTGTGGTTCCACCCGAGTTTGTAGAAGAGACCAAGGGAAGGAGTTGGTTGGCGAGTTGGTGCCCTCAAGAACAAGTTCTGAATCATCCAGCTATAGGAGGTTTCTTGACACACTGTGGATGGAACTCTACGGTTGAAAGTCTGTGTGGTGGAGTTCCCATGATCTGTTGGCCCTTCTTTGCTGACCAACAAATAAATTGTAGGTTCTGTTGCAAAGAGTGGGGTGTAGCCATGCAGATAGAGGGTGATGTTAGAAGGAATTATATAGAAGTCCTTGTGAGAAAATTAATGGAAGGACAGGAAGGCAAACAAATGAGGAAGAAATCCTTGGAATGGAAGAAGTTGGCAGAGGAAGCTGTTACTGCACCAAATGGTTCATCATTCTTGAATTTGAACAAGATGGTTAACCAGGTGCTTCTTTCTCCTAAAAATTAG

Protein Analysis

483

Amino Acids

53.88

Weight (kDa)

5.48

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_N PF26168 12 - 107 9e-07 Glycosyltransferase, N-terminal domain
UDPGT PF00201 283 - 428 3e-26 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000553)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G22340 AT1G22360 AT1G22360 AT1G22370 AT1G22370 AT1G22380 AT1G22400 AT1G78270
fragaria_vesca FvH4_5g36970 FvH4_5g36972 FvH4_5g36980 FvH4_5g37000 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020 FvH4_5g37020
malus_domestica MD08G1185000.v1.1 MD08G1185500.v1.1 MD08G1185600.v1.1 MD08G1185700.v1.1 MD15G1371800.v1.1
prunus_persica Prupe.1G519500_v2.0.a1 Prupe.1G519600_v2.0.a1 Prupe.1G519700_v2.0.a1 Prupe.1G519800_v2.0.a1 Prupe.1G519900_v2.0.a1 Prupe.1G520000_v2.0.a1 Prupe.1G520100_v2.0.a1 Prupe.1G520200_v2.0.a1 Prupe.1G520300_v2.0.a1 Prupe.1G520400_v2.0.a1 Prupe.1G520400_v2.0.a1
pyrus_communis pycom08g15890 pycom08g15930 pycom15g33310
rosa_chinensis RchiOBHm_Chr7g0231031 RchiOBHm_Chr7g0231091 RchiOBHm_Chr7g0243731 RchiOBHm_Chr7g0243761 RchiOBHm_Chr7g0243781 RchiOBHm_Chr7g0243791 RchiOBHm_Chr7g0243821
rosa_laevigata RLG00000000832 RLG00000000834 RLG00000000835 RLG00000000836 RLG00000000837 RLG00000000838 RLG00000001435 RLG00000001436 RLG00000001650
rosa_multiflora Rmu_co8142950.1_g000001 Rmu_sc0000780.1_g000001 Rmu_sc0000780.1_g000003 Rmu_sc0000780.1_g000006 Rmu_sc0000780.1_g000007 Rmu_sc0012403.1_g000014
rosa_roxburghii Rroxscaffold_3G00221740 Rroxscaffold_3G00221770 Rroxscaffold_3G00221810 Rroxscaffold_3G00221820
rosa_rugosa Rorug07G0264200 Rorug07G0264400 Rorug07G0321000 Rorug07G0321300 Rorug07G0321600 Rorug07G0321700 Rorug07G0321800
rosa_samantha Rh7CG437000 Rh7CG437300 Rh7CG493400 Rh7CG493800 Rh7CG494000 Rh7CG494500
rosa_wichuraiana Rw7G034550 Rw7G039670 Rw7G039680 Rw7G039690 Rw7G039700 Rw7G039740 Rw7G039750

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 817
Acc36I ACCTGC 1 cut(s) 268
AccB1I GGYRCC 1 cut(s) 1074
AccI GTMKAC 2 cut(s) 40, 574
AclWI GGATC 1 cut(s) 153
AcsI RAATTY 3 cut(s) 337, 877, 1402
AcuI CTGAAG 1 cut(s) 286
AdeI CACNNNGTG 1 cut(s) 1130
AfaI GTAC 2 cut(s) 137, 448
AfiI CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
AgsI TTSAA 7 cut(s) 205, 485, 732, 854, 1151, 1402, 1408
AjnI CCWGG 2 cut(s) 559, 1422
AjuI GAANNNNNNNTTGG 2 cut(s) 1325, 1357
AluBI AGCT 6 cut(s) 86, 662, 931, 1016, 1106, 1370
AluI AGCT 6 cut(s) 86, 662, 931, 1016, 1106, 1370
Alw26I GTCTC 2 cut(s) 956, 1037
AlwI GGATC 1 cut(s) 153
Ama87I CYCGRG 2 cut(s) 162, 1028
AoxI GGCC 6 cut(s) 184, 220, 409, 510, 989, 1184
ApeKI GCWGC 1 cut(s) 928
ApoI RAATTY 3 cut(s) 337, 877, 1402
AseI ATTAAT 2 cut(s) 452, 1301
Asp700I GAANNNNTTC 1 cut(s) 1089
AspLEI GCGC 1 cut(s) 150
AspS9I GGNCC 3 cut(s) 167, 761, 1185
AsuHPI GGTGA 4 cut(s) 238, 458, 994, 1271
AvaI CYCGRG 2 cut(s) 162, 1028
AvaII GGWCC 2 cut(s) 167, 761
BaeGI GKGCMC 1 cut(s) 1079
BanI GGYRCC 1 cut(s) 1074
BbvI GCAGC 1 cut(s) 940
BccI CCATC 5 cut(s) 176, 212, 483, 1128, 1408
BciT130I CCWGG 2 cut(s) 561, 1424
BcoDI GTCTC 2 cut(s) 956, 1037
BfmI CTRYAG 2 cut(s) 100, 1107
BfoI RGCGCY 1 cut(s) 151
BfuAI ACCTGC 1 cut(s) 268
BisI GCNGC 1 cut(s) 929
BlsI GCNGC 1 cut(s) 930
Bme1390I CCNGG 2 cut(s) 561, 1424
Bme18I GGWCC 2 cut(s) 167, 761
BmeT110I CYCGRG 2 cut(s) 162, 1028
BmgT120I GGNCC 3 cut(s) 167, 761, 1185
BmiI GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
BmrFI CCNGG 2 cut(s) 561, 1424
BmsI GCATC 4 cut(s) 226, 382, 688, 712
BpuEI CTTGAG 3 cut(s) 39, 881, 1065
Bsa29I ATCGAT 1 cut(s) 209
BsaI GGTCTC 2 cut(s) 956, 1037
BsaJI CCNNGG 5 cut(s) 15, 163, 702, 1047, 1341
BsaWI WCCGGW 1 cut(s) 841
Bsc4I CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
Bse1I ACTGG 3 cut(s) 416, 513, 557
BseBI CCWGG 2 cut(s) 561, 1424
BseCI ATCGAT 1 cut(s) 209
BseDI CCNNGG 5 cut(s) 15, 163, 702, 1047, 1341
BseGI GGATG 2 cut(s) 1099, 1139
BseLI CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
BseMII CTCAG 3 cut(s) 623, 793, 1026
BseNI ACTGG 3 cut(s) 416, 513, 557
BseSI GKGCMC 1 cut(s) 1079
BseXI GCAGC 1 cut(s) 940
BseYI CCCAGC 1 cut(s) 1004
BsgI GTGCAG 1 cut(s) 1362
BshFI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
BshNI GGYRCC 1 cut(s) 1074
BshVI ATCGAT 1 cut(s) 209
BsiHKCI CYCGRG 2 cut(s) 162, 1028
BsiSI CCGG 1 cut(s) 842
BslFI GGGAC 2 cut(s) 153, 599
BslI CCNNNNNNNGG 7 cut(s) 56, 198, 566, 978, 1053, 1109, 1347
BsmAI GTCTC 2 cut(s) 956, 1037
BsmFI GGGAC 2 cut(s) 153, 599
BsnI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
Bso31I GGTCTC 2 cut(s) 956, 1037
BsoBI CYCGRG 2 cut(s) 162, 1028
Bsp1286I GDGCHC 1 cut(s) 1079
Bsp1407I TGTACA 1 cut(s) 446
Bsp143I GATC 3 cut(s) 158, 994, 1176
BspANI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
BspCNI CTCAG 3 cut(s) 624, 792, 1025
BspDI ATCGAT 1 cut(s) 209
BspHI TCATGA 1 cut(s) 915
BspLI GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
BspMI ACCTGC 1 cut(s) 268
BspPI GGATC 1 cut(s) 153
BspT107I GGYRCC 1 cut(s) 1074
BspTNI GGTCTC 2 cut(s) 956, 1037
BsrGI TGTACA 1 cut(s) 446
BsrI ACTGG 3 cut(s) 416, 513, 557
BssECI CCNNGG 5 cut(s) 15, 163, 702, 1047, 1341
BssMI GATC 3 cut(s) 158, 994, 1176
BssNAI GTATAC 2 cut(s) 41, 575
BssT1I CCWWGG 3 cut(s) 702, 1047, 1341
Bst1107I GTATAC 2 cut(s) 41, 575
Bst2UI CCWGG 2 cut(s) 561, 1424
Bst4CI ACNGT 4 cut(s) 544, 913, 1130, 1147
Bst6I CTCTTC 3 cut(s) 431, 771, 1035
BstAUI TGTACA 1 cut(s) 446
BstC8I GCNNGC 2 cut(s) 152, 188
BstDEI CTNAG 4 cut(s) 155, 632, 779, 1012
BstEII GGTNACC 1 cut(s) 555
BstENI CCTNNNNNAGG 2 cut(s) 54, 196
BstF5I GGATG 2 cut(s) 1099, 1139
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 1 cut(s) 150
BstKTI GATC 3 cut(s) 161, 997, 1179
BstMAI GTCTC 2 cut(s) 956, 1037
BstMBI GATC 3 cut(s) 158, 994, 1176
BstMWI GCNNNNNNNGC 3 cut(s) 668, 1367, 1376
BstNI CCWGG 2 cut(s) 561, 1424
BstNSI RCATGY 2 cut(s) 32, 592
BstPI GGTNACC 1 cut(s) 555
BstSCI CCNGG 2 cut(s) 559, 1422
BstSFI CTRYAG 2 cut(s) 100, 1107
BstSLI GKGCMC 1 cut(s) 1079
BstV1I GCAGC 1 cut(s) 940
BstX2I RGATCY 1 cut(s) 158
BstXI CCANNNNNNTGG 1 cut(s) 407
BstYI RGATCY 1 cut(s) 158
BstZ17I GTATAC 2 cut(s) 41, 575
Bsu15I ATCGAT 1 cut(s) 209
BsuRI GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
BsuTUI ATCGAT 1 cut(s) 209
BtsCI GGATG 2 cut(s) 1099, 1139
BtsIMutI CAGTG 2 cut(s) 540, 1126
BveI ACCTGC 1 cut(s) 268
Cac8I GCNNGC 2 cut(s) 152, 188
CciI TCATGA 1 cut(s) 915
CfoI GCGC 1 cut(s) 150
Cfr13I GGNCC 3 cut(s) 167, 761, 1185
ClaI ATCGAT 1 cut(s) 209
CseI GACGC 1 cut(s) 660
CsiI ACCWGGT 1 cut(s) 1422
Csp6I GTAC 2 cut(s) 136, 447
CviQI GTAC 2 cut(s) 136, 447
DdeI CTNAG 4 cut(s) 155, 632, 779, 1012
DpnI GATC 3 cut(s) 160, 996, 1178
DpnII GATC 3 cut(s) 158, 994, 1176
DraIII CACNNNGTG 1 cut(s) 1130
DrdI GACNNNNNNGTC 1 cut(s) 817
DseDI GACNNNNNNGTC 1 cut(s) 817
Eam1104I CTCTTC 3 cut(s) 431, 771, 1035
EarI CTCTTC 3 cut(s) 431, 771, 1035
Eco130I CCWWGG 3 cut(s) 702, 1047, 1341
Eco147I AGGCCT 1 cut(s) 991
Eco31I GGTCTC 2 cut(s) 956, 1037
Eco47I GGWCC 2 cut(s) 167, 761
Eco57I CTGAAG 1 cut(s) 286
Eco88I CYCGRG 2 cut(s) 162, 1028
Eco91I GGTNACC 1 cut(s) 555
EcoNI CCTNNNNNAGG 2 cut(s) 54, 196
EcoO109I RGGNCCY 1 cut(s) 167
EcoO65I GGTNACC 1 cut(s) 555
EcoRII CCWGG 2 cut(s) 559, 1422
EcoT14I CCWWGG 3 cut(s) 702, 1047, 1341
EcoT22I ATGCAT 1 cut(s) 727
ErhI CCWWGG 3 cut(s) 702, 1047, 1341
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 2 cut(s) 153, 599
FblI GTMKAC 2 cut(s) 40, 574
Fnu4HI GCNGC 1 cut(s) 929
FokI GGATG 2 cut(s) 1086, 1146
Fsp4HI GCNGC 1 cut(s) 929
GlaI GCGC 1 cut(s) 149
GluI GCNGC 1 cut(s) 929
GsaI CCCAGC 1 cut(s) 1008
HaeII RGCGCY 1 cut(s) 151
HaeIII GGCC 6 cut(s) 186, 222, 411, 512, 991, 1186
HapII CCGG 1 cut(s) 842
HgaI GACGC 1 cut(s) 660
HhaI GCGC 1 cut(s) 150
Hin6I GCGC 1 cut(s) 148
HinP1I GCGC 1 cut(s) 148
HincII GTYRAC 2 cut(s) 127, 1420
HindII GTYRAC 2 cut(s) 127, 1420
HinfI GANTC 4 cut(s) 211, 803, 863, 1096
HpaI GTTAAC 1 cut(s) 1420
HpaII CCGG 1 cut(s) 842
HphI GGTGA 4 cut(s) 238, 458, 994, 1271
Hpy166II GTNNAC 5 cut(s) 41, 127, 575, 895, 1420
Hpy188I TCNGA 5 cut(s) 19, 305, 319, 367, 1095
Hpy8I GTNNAC 5 cut(s) 41, 127, 575, 895, 1420
HpyCH4III ACNGT 4 cut(s) 544, 913, 1130, 1147
HpyCH4IV ACGT 1 cut(s) 577
HpyCH4V TGCA 7 cut(s) 32, 357, 395, 725, 1227, 1249, 1379
HpyF10VI GCNNNNNNNGC 3 cut(s) 668, 1367, 1376
HpyF3I CTNAG 4 cut(s) 155, 632, 779, 1012
HpySE526I ACGT 1 cut(s) 577
HspAI GCGC 1 cut(s) 148
KspAI GTTAAC 1 cut(s) 1420
Kzo9I GATC 3 cut(s) 158, 994, 1176
LmnI GCTCC 1 cut(s) 706
Lsp1109I GCAGC 1 cut(s) 940
LweI GCATC 4 cut(s) 226, 382, 688, 712
MabI ACCWGGT 1 cut(s) 1422
MaeII ACGT 1 cut(s) 577
MaeIII GTNAC 6 cut(s) 59, 244, 349, 555, 962, 1372
MalI GATC 3 cut(s) 160, 996, 1178
MboI GATC 3 cut(s) 158, 994, 1176
MboII GAAGA 8 cut(s) 321, 418, 758, 806, 848, 1052, 1345, 1363
MflI RGATCY 1 cut(s) 158
MhlI GDGCHC 1 cut(s) 1079
MluCI AATT 9 cut(s) 80, 325, 337, 877, 1210, 1273, 1298, 1402, 1444
MlyI GAGTC 2 cut(s) 797, 872
MmeI TCCRAC 1 cut(s) 33
Mph1103I ATGCAT 1 cut(s) 727
MroXI GAANNNNTTC 1 cut(s) 1089
MseI TTAA 6 cut(s) 452, 504, 521, 687, 1301, 1419
MslI CAYNNNNRTG 2 cut(s) 454, 914
MspA1I CMGCKG 2 cut(s) 931, 1016
MspI CCGG 1 cut(s) 842
MspR9I CCNGG 2 cut(s) 561, 1424
MvaI CCWGG 2 cut(s) 561, 1424
MwoI GCNNNNNNNGC 3 cut(s) 668, 1367, 1376
NdeII GATC 3 cut(s) 158, 994, 1176
NlaIV GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
NmuCI GTSAC 2 cut(s) 59, 244
NsiI ATGCAT 1 cut(s) 727
NspI RCATGY 2 cut(s) 32, 592
PagI TCATGA 1 cut(s) 915
PceI AGGCCT 1 cut(s) 991
PdmI GAANNNNTTC 1 cut(s) 1089
PfeI GAWTC 2 cut(s) 211, 1096
PkrI GCNGC 1 cut(s) 930
PleI GAGTC 2 cut(s) 797, 871
PpsI GAGTC 2 cut(s) 797, 871
PpuMI RGGWCCY 1 cut(s) 167
PshBI ATTAAT 2 cut(s) 452, 1301
Psp5II RGGWCCY 1 cut(s) 167
Psp6I CCWGG 2 cut(s) 559, 1422
PspEI GGTNACC 1 cut(s) 555
PspFI CCCAGC 1 cut(s) 1004
PspGI CCWGG 2 cut(s) 559, 1422
PspN4I GGNNCC 5 cut(s) 7, 169, 274, 1023, 1076
PspPI GGNCC 3 cut(s) 167, 761, 1185
PspPPI RGGWCCY 1 cut(s) 167
PsuI RGATCY 1 cut(s) 158
PvuII CAGCTG 2 cut(s) 931, 1016
RsaI GTAC 2 cut(s) 137, 448
RsaNI GTAC 2 cut(s) 136, 447
RseI CAYNNNNRTG 2 cut(s) 454, 914
SaqAI TTAA 6 cut(s) 452, 504, 521, 687, 1301, 1419
SatI GCNGC 1 cut(s) 929
Sau3AI GATC 3 cut(s) 158, 994, 1176
Sau96I GGNCC 3 cut(s) 167, 761, 1185
SchI GAGTC 2 cut(s) 797, 872
ScrFI CCNGG 2 cut(s) 561, 1424
SduI GDGCHC 1 cut(s) 1079
SexAI ACCWGGT 1 cut(s) 1422
SfaNI GCATC 4 cut(s) 226, 382, 688, 712
SfcI CTRYAG 2 cut(s) 100, 1107
SinI GGWCC 2 cut(s) 167, 761
SmiMI CAYNNNNRTG 2 cut(s) 454, 914
SmlI CTYRAG 3 cut(s) 54, 860, 1080
SmoI CTYRAG 3 cut(s) 54, 860, 1080
Sse9I AATT 9 cut(s) 80, 325, 337, 877, 1210, 1273, 1298, 1402, 1444
SseBI AGGCCT 1 cut(s) 991
StuI AGGCCT 1 cut(s) 991
StyD4I CCNGG 2 cut(s) 559, 1422
StyI CCWWGG 3 cut(s) 702, 1047, 1341
TaaI ACNGT 4 cut(s) 544, 913, 1130, 1147
TaiI ACGT 1 cut(s) 580
TaqI TCGA 2 cut(s) 180, 209
TasI AATT 9 cut(s) 80, 325, 337, 877, 1210, 1273, 1298, 1402, 1444
TatI WGTACW 2 cut(s) 135, 446
TfiI GAWTC 2 cut(s) 211, 1096
Tru1I TTAA 6 cut(s) 452, 504, 521, 687, 1301, 1419
Tru9I TTAA 6 cut(s) 452, 504, 521, 687, 1301, 1419
TscAI CASTG 2 cut(s) 547, 1133
TseFI GTSAC 2 cut(s) 59, 244
TseI GCWGC 1 cut(s) 928
Tsp45I GTSAC 2 cut(s) 59, 244
TspDTI ATGAA 5 cut(s) 101, 417, 589, 758, 1380
TspRI CASTG 2 cut(s) 547, 1133
VpaK11BI GGWCC 2 cut(s) 167, 761
VspI ATTAAT 2 cut(s) 452, 1301
XagI CCTNNNNNAGG 2 cut(s) 54, 196
XapI RAATTY 3 cut(s) 337, 877, 1402
XceI RCATGY 2 cut(s) 32, 592
XmiI GTMKAC 2 cut(s) 40, 574
XmnI GAANNNNTTC 1 cut(s) 1089
Zsp2I ATGCAT 1 cut(s) 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.